NEXUS [File created by TreeBASE: 7/26/07 21:09:14] [Matrix accession#: M2416] BEGIN TAXA; TITLE M2416; DIMENSIONS NTAX=19; TAXLABELS Memecylon_lateriflorum_1.8 Memecylon_lateriflorum_1.6 Pternandra_multiflora_3.1 Pternandra_coerulescens_1.4 Pternandra_coerulescens_1.3 Crypteronia_paniculata_2.5 Crypteronia_paniculata_2.3 Heteropyxis_natalensis_1.10 Heteropyxis_natalensis_1.6 Heteropyxis_natalensis_1.4 Tibouchina_urvilleana_3.3 Tibouchina_urvilleana_3.2 Tibouchina_urvilleana_3.1 Pternandra_coerulescens_2.1 Heteropyxis_natalensis_1.2 Zea_mays_GapC4 Zea_mays_GapC3 Zea_mays_GapC2 Zea_mays_GapC1 ; END; BEGIN CHARACTERS; TITLE M2416; DIMENSIONS NCHAR=412; FORMAT DATATYPE = DNA MISSING = ? GAP = - ; MATRIX Memecylon_lateriflorum_1.8 GATAgATTTGGAATTGTTGAGGGTcTCATGaCCaCTGTaCaCTCTATCaCTGCCACCCAgAAAACCGTCGATGGCCCATCAATGAAGgATTGGAGAGGTGgAAGGGCTGCcTCTTTCAACaTCATTCCTAGCAGCACTGGCGCTGcTAAGGCTGTTGGAAAAGTTCTGCCATCATTGAACGGAAAATTGACTGGAATGGCCTTCCGAGTCCCAACTGTCGATGTATCTGTTGTGGATTTGACCGTAAGACTTGAGAAGGAGGCTACCTATGATGATATCAAGCATGCCATGAAGGAGGCATCTGAgGGCAAATTGAAGGGAATTGTGGGTTATACTGAGGATGATGTGGTCTCCaCTGACTTTATTGGTGACAGCAgGTcGaGcATcTTTgaTGCCAAGGcTGGAATTGCTT Memecylon_lateriflorum_1.6 gATAgATTTGGAATTGTTGAGGGTcTCATGACCaCTGTaCaCTcTaTCaCTGCCaCCCAGAAAACCgTCgATGGCCCaTCAATgAAGgATTGgAgAGGTGgAAGGGCTGCcTcTTTCAACATCATTCCCAGCAGCAcTGGCGcTGcTAAGGCTGTTGGAAAAGTTCTGCCATCATTGAACGGAAAATTGACTGGAATGGCCTTCCGAGTCCCAACTGTCGATGTATCTGTTGTGGATTTGACCGTAAGACTTGAGAAGGAGGCTACCTATGATGATATCAAGCATGCCaTGAAGGAGGcATcTGAGGGCAAATTGAAGGGaATTGTGGGTTaTACTGAGGATGATGTGGTCTCCAcTGACTTTaTTgGTGACAgCaggTCgagCaTCTTTgATgCCAAGGcTGGAATTgCTT Pternandra_multiflora_3.1 gaTagaTTTggAATTGTTgagggTcTCatgaCAActgtccActccattactgCCACCCAgAAAAcTGttGATGgCCCGtcaatgaaGGactggagaGgTggAAgAGcGGcctccTTcAACatcattCCtagCaGcAcTGgTgcTGcGAAGgCCGTtGGAAAAGTTCTGCCAGTATTgAACGGAAAATTGACTGGAATGGCCTTCCGTGTCCCaACCGTAGATGTCTCTGTTGTTGATCTTACTGTCAGACTTGAGAAGGAGGCTACTTATGATGACATCAAGGCTGCCATCAAGGAGGCaTCCCAGGGCAAgttgaAGggaatTTTGggctAcactgAAGatGAtGTggtCtCCaCTGaCtTTGttggtgacagcagATCAAGcatattcGATGccaaGGctgGAATTGCTT Pternandra_coerulescens_1.4 gatagatttGGAAttgttgagggtctcatgAcAACtgTCCactCCattactgccaCCCAgAAAActGTTGatGGCCcgTCAAtgAAGGactggagaggtggaagagcGGCCtCCttCaaCaTCATtcccAGcAgcAcTGGcgctgcgaaGgCCGTCGGAAAAGTTCTGCCAGTATTGAACGgAAAATTGACTGGAATGGCCTTCCGTGTCCCAACtGTAGATGTCTCTGTTGTTGATCTTACTGTCAGACTTCAGAAGGAGGCTACTTATGATGACATCAAGGCTGCCATCAAGAAGGCATcCgAAGGCAAGTTGAAGGGAATTTTGGgCTaCACTGAAgAtGAtGTGGtCTCCaCTGACTTTaTTGGtGACagCAGatcAAGCAtattCGAtgccAAggctggAATTgctt Pternandra_coerulescens_1.3 gatAgAtttggAAttgttgagggtctcatgAcAActgtccACtCCAttActGccaCCCAgAAAActgttgatgGCCCGTCaATGaaggactGGaGAGGtGGaagaGCgGCCtCCTTcAAcAtcATTcccagcagcacTggcgcTGcgaaGgCCgTCGGAAAAGTTCTGCCAGTATTGAACGgAAAATTGACTGGAATGGCCTTCCGTGTCCCAACTGTAgATGTCTCTGTTGTTGATCTTACTGTCAGACTTCAGAAGGAGGCTACTTATGATGACATCAAGGCTGCCATCAAGAAGGCATCCgAAGGCAAgTTaAAGGGAATTTTGGGCTaCacTGAAgATgAtGtGGtCtCCaCTGACTTTaTTgGtGacagcagatcaagcatatTCGatGcCAAgGCtGgAAttgCTt Crypteronia_paniculata_2.5 gatagatttggaattgttgagggacttatgaccactgtccactctatcactgctacccagaaaactgtcgatggtccatcaatgaaggactggagaggtggaagagctgcttcctttaacatcattcctagcagcactggtgctgctaaGgCCGTTGGGAAGGTTCTTCCAGCACTGAACGGAAAGTTGACTGGAATGTCTTTCCGTGTTCCTACAGTAGATGTCTCCGTTGTTGATCTCACGGTCAGACTTcAgAAGGAGGcTACATACGAGGAAATCAAAGGTGCCATCAAGGAGGagTCTGagggcAAgTTGAAGGGTATTCTGGGCTaCACCGAGGACgATGTGGTCTCCaCTgaCTTTGTTGGCGACAGCAGATCAAGCATATTTGATGCCAAGGCTGGAATTGCTT Crypteronia_paniculata_2.3 gatagatttggaattgttgagggacttatgaccactgttcactccatcacTgcTacccagaaaacTgTcgaTggTccatcaatgaaggacTggagaggtggaagagctgcTTccTTcaacaTcaTTcccagcagcactggtgctgctaagGcCgTTggAAAggTTcTgcCaGcTcTgaATGGAAAATTgACCGgAATGGCTTTccGTGTCCCCACAGTGgATGTCTCCGTTgTTgATCTCACTGTCAGGCTcgAgAAGGAGgCCacaTaTgAGgAAaTcAAagcTGCcatcaaGGAGGAGTcTAAGGGCaAGTTGAAGGGAATTTTgggctacactgaggatgatgTggTcTccactgacTTTgTcggtgatagcagatcaagcatatTTgatgccaaggctggaaTTgcTT Heteropyxis_natalensis_1.10 gatagaTTTggaaTTgTTgagggacTTaTgacaacTgTTcacTccattacTgccacacagaagacTgTTgaTggcccaTcgaTgaaggactggagaggtggaagagctgcttcctTcaacatcatccccagcagcacTggTgcTgcaaaGGCCGTGGGAAAGGTGCTACCGGCTCTCAATGGTAAACTCACTGGAATGTCTTTCCGTGTGCCTACTGTTGATGTGTCTGTTGTGGATCTCACCGTCAGGCTTGAGAAGGAGGCAACTTATGAGGAGATCAAAGCTGTCATTAAGGAgcagTCTgagGGcaAActgaAAgGGaTTTTagGTTaCaCTGAAGACGATGTGGTCTCCACAGACTTTGTTGGTGATAACAGGTCAAGCATTTTCGATGCCAAGGCTGGAATTGCTT Heteropyxis_natalensis_1.6 gatagaTTTggaaTTgTTgagggacTTaTgacaacTgTTcacTccaTTacTgccacacagaagacTgTTgaTggcccaTcgaTgaaggacTggagaggTggaagagcTgcTTccTTcaacatcatccccagcagcactggtgctgcaaaGgCCGTGGgAAAGGTGCTACCGGCTCTCAATGGTAAACTCACTGGAATGTCTTTCCGTGTGCCTACTGTTGATGTGTCTGTTGTGGATCTCACCGTCAGGCTTGAGAAGGAGGCAACTTACGAGGAGATCAAAGCTGTCATTAAGGAgCAGTCTgAGGGCaAACTGAAAGGGATTTTAGGTTACACTGAAGACGATGTGGTCTCCACAGACTTTGTTGGTGATAACAGGTCAAGCATTTTCGATGCCAAGGCTG-AATTGCTT Heteropyxis_natalensis_1.4 gatagatttggaattgttgagggacttatgacaactgttcactccattactgccacacagaagacTgTTgaTggcccaTcgatgaaggaTTggagaggTggaagagcTgcTTccTTcaacaTcaTccccagcagcacTggTgcTgcaaaGGCCGTGGgAAAGGTGCTACCGGCTCTCAATGGTAAACTCACTGGAATGTCTTTCCGTGTGCCTACTGTTGATGTGTCTGTTGTGGATCTCACCGTCAGGCTTGAGAAGGAGGCAACTTACGAGGAGATCAAAGCTGTCATTAAGGAgCAGTCTGAGGGCAAACTGAAAGGGATTTTAGGTTACACTGAAGACGATGTGGTCTCCACAGACTTTGTTGGTGATAACAGGTCAAGCATTTTCGATGCCAAGGCTGGAATTGCTT Tibouchina_urvilleana_3.3 gatagATTTGGAATTGTTgAGGGGcTAATGACCaCAGTGCATTCCaTGAcAGCCACCCAAAAGACTGTCGACGGACCATCCATGAAGGATTGGAGGGGAGGCAGAGCCGCTTCTTTTAACATAATCCCGAGCAGCACGGGGGCGGCAAAGGCAGTTGGAAAAGTGCTCC-GTCCCTGAACGGGAAGCTGACTGGAATGGCCTTCCGTGTGCCCACCGTGGACGTCTCTGTGGTCGACCTAACCGTAAGACTGGAAAAGGAAGCATCTTATGACGAGATCAAGGCTGCCATCAAGGAGgAATCCgAGGGGAAAaTGAAGGgCaTCcTcgGGTACaCGgAGgAcgACgTAgTCTCCacCGACTTcATGGgAgAcAATAGGTCAAGcaTcTTCgACgCCAagGCTGgaATTGcTT Tibouchina_urvilleana_3.2 gATAgATTTGGAATTGTTGAgGGGcTAATGACCACAGTGCATTCCATGACAGCCACCCAAAAGACTGTCGACGGACCATCCATGAAGGATTGGAGGGGAGGCAGAGCCGCTTCTTTTAACATAATCCCGAGCAGCACGGGGGCGGCAAAGGCAGTTGGAAAAGTGCTCCCGTCCCTGAACGGGAAGCTGACTGGAATGGCCTTCCGTGTGCCCACCGTGGACGTCTCTGTGGTCGACCTAACCGTAAGACTGGAAAAGGAAGCATCTTATGACGAGATCAAGGCCGCCATCAAGGAGGAATCCGAGGGGAAAATGAAGGGCATCCTCGGGTACACGGAGGACGACGTAgTCTCCACCGACTTCATGGGAGACAACAGGTCAAGCATcTTCGACGCCaAGGCTGGAATTGCTT Tibouchina_urvilleana_3.1 gaTAGATTTGGAATTGTTGAGGGGcTAATGACCACAGTGCATTCCATGACTGCCACCCAGAAGACTGTCGACGGACCATCCaTGAAGGAcTGgAgGGGAgGCAgAgCCGCTTCTTTTAACATAATCCCGAGCAGCACGGGGGCGGCGAAGGCAGTTGGAAAAGTGCTCCCGTCCCTGAACGGGAAGCTGACTGGAATGGCCTTCCGTGTGCCCACCGTGGACGTCTCTGTGGTCGACCTAACCGTAAGACTGGAAAAGGAAGCATCTTATGACGAGATCAAGGCTGCCATCAAGGAGGAATCCgAGGGGAAAaTGAAGGGCATCCTCGGGTACACGGAGGACGACgTAgTCTCCACCgACTTCaTGGGAGACAaTAGGTCAAGCATCTTCGACgCCAAGgCTGGAATTGCTT Pternandra_coerulescens_2.1 gATAgATTTGGAATTgTTgAGGGTcTCATGaCCaCaGTaCaTTCCATAaCCGCCACCCAAAAGACTGTTGATGGGCCATCCATGAAGGACTGGAGAGGGGGTAgAGCTGCCTCTTTTAACATAATTCCAAGCAGCACAGGAGCTGCTAAGGCTGTTGGAAAAGTGCTTCCAGCGCTAAATGGGAAACTGACTGGAATGGCTTTCCGTGTGCCTACTGTGGATGTCTCGGTGGTCGACCTAACTGTGAGACTTGAGAAGCCAGCTTCCTATGATGAGATCAAGGCCGCCATCAAGGAGGAATCTGAGAGCAATATGAAAGGCATTCTgGGATACACAGAGGATGATGTTGTATcCACGGACTTTCTAGGTGATAGCAgATCAAgCATcTTTgACgCCAAGGCTGGAATTGCTT Heteropyxis_natalensis_1.2 gatagaTTTggaattgttgagggtcttatgaccactgtccattccattacTgccacacagaagactgttgatggaccatcaatgaaggactggagaggtggcAGAgCTGcTTcTTTcaaCatcATcccaaGcagcACcGgTGCTGccaaGgCCGTAGGgAAAGTGCTTCCAGCACTAAATGgCAAGTTGACTGGAATGGCTTTCCGTGTGCCCACTGTTGATGTCTCAGTGGTTGACCTCACTGTGAGACTCGAGAAGGCTGCTACTTATGACGAGATCAAGGCTGCAATTAAGGAGGAATCTgAAGGGAATaTgAAGGGCaTTCTTGGTTTCACTGATgATgATgTGGTATCAACTGACTTTGTTGGTGACAaCAGGTCAAGTATCTTTGATGCCAAGGCTGGAATTGCTT Zea_mays_GapC4 GACAAGTTCGGTATCGTTGAGGGTCTGATGACCACTGTCCATGCCATCACTGCTACCCAGAAGACTGTTGATGGGCCCTCATCTAAGGACTGGAGGGGTGGAAGGGCTGCTAGTTTCAACATCATTCCCAGCAGCACTGGAGCTGCTAAGGCTGTTGGCAAAGTGCTTCCTGTCCTTAACGGAAAGTTGACTGGAATGTCTTTCCGTGTCCCAACCGTCGATGTTTCTGTTGTTGATTTGACTGTTAGGCTTGAAAAGTCAGCAACCTATGATGAGATCAAGGCTGCGGTCAAGGCCGAGGCAGAAGGTAGCCTCAAGGGCATCCTGGGTTACGTTGAGGAGGACCTTGTTTCCACCGATTTCCAGGGTGACAGCAGGTCTAGCATCTTTGATGCTAAGGCTGGCATTGCCT Zea_mays_GapC3 GACAAGTTCGGTATTGTTGAGGGTCTGATGACCACTGTTCATGCCATCACTGCTACCCAGAAGACTGTTGATGGGCCCTCATCTAAGGACTGGAGGGGTGGAAGGGCTGCTAGTTTCAACATCATTCCCAGCAGCACTGGAGCTGCTAAGGCTGTTGGCAAAGTGCTTCCTGTCCTCAATGGAAAGTTGACTGGAATGTCTTTCCGTGTCCCAACTGTCGATGTTTCTGTTGTTGATCTAACTGTTAGGCTTGAGAAGTCTGCCACCTATGATGAGATCAAGGCTGCGGTCAAGGCCGAGGCAGAGGGTAGCCTCAAGGGCATTCTGGGTTATGTCGAGGAGGACCTTGTTTCCACCGATTTCCAGGGTGACAGCAGGTCTAGCATCTTTGATGCGAAGGCTGGCATTGCCT Zea_mays_GapC2 GACAACTTTGGCATTATTGAGGGCTTGATGACAACTGTTCATGCCATCACTGCCACCCAGAAGACTGTTGATGGACCCTCAGCCAAGGACTGGAGAGGTGGCAGGGCTGCCAGCTTTAACATCATTCCCAGCAGCACCGGTGCTGCCAAGGCTGTCGGTAAGGTTCTTCCTGAATTGAATGGCAAGCTCACTGGCATGTCCTTCCGGGTTCCCACCGTGGATGTGTCAGTTGTTGACCTCACTGTCAGAATCGAGAAGGGGGCCTCTTACGAGGAAATCAAGAAAGCTATTAAGGCTGCTTCTGAGGGCCCACTCAAGGGTATTATGGGCTACGTGGAGGAGGATCTGGTTTCCACCGACTTCACCGGTGACAGCAGGTCGAGCATCTTCGACGCCAAGGCCGGGATTGCCC Zea_mays_GapC1 GACAACTTCGGCATTGTTGAGGGTTTGATGACAACTGTTCATGCCATCACTGCCACACAGAAAACTGTTGACGGACCCTCAGCCAAGGACTGGAGAGGTGGCAGGGCTGCCAGCTTTAACATCATTCCTAGCAGCACCGGTGCTGCCAAGGCTGTTGGTAAAGTTCTTCCTGATCTGAATGGCAAGCTCACTGGTATGTCCTTCCGTGTTCCTACTGTGGATGTCTCGGTTGTTGACCTCACCGTCAGAATCGAGAAGGGGGCCTCCTATGAGGATATCAAGAAAGCTATTAAGGCTGCTTCCGAGGGTCCACTCAAGGGTATCATGGGTTATGTGGAAGAGGATCTGGTTTCTACCGACTTCCTTGGTGACAGCAGGTCGAGCATCTTCGACGCCAAGGCCGGGATCGCTC ; END; BEGIN CODONS; CODONPOSSET * CodonPositions = 1: 1 - . \ 3 , 2: 2 - . \ 3 , 3: 3 - . \ 3 ; END;