NEXUS
[File created by TreeBASE:  7/26/07  21:09:19]
[Matrix accession#: M2428]

BEGIN TAXA;
	TITLE M2428;
	DIMENSIONS  NTAX=12;
	TAXLABELS
		Platanus_wrightii	Platanus_racemosa	Platanus_orientalis	Platanus_occidentalis	Platanus_mexicana	Platanus_kerrii	Eschscholzia_californica	Vitis_vinifera	Trochodendron_aralioides	Peperomia_sp	Oryza_sativa	Nymphaea_ororata
	;
END;

BEGIN CHARACTERS;
	TITLE M2428;
	DIMENSIONS NCHAR=309;
	FORMAT DATATYPE = DNA MISSING = ? GAP = - ;
	MATRIX
		Platanus_wrightii              GTGACGAACCAGGTATTCAGATATGCAAAAAGGGCTGGAGCAAGCTACATAAACAAGCCAAAAATGAGACACTATGTGCACTGCTATGCTTTGCATTGCCTTGATGAAGACGCATCTAATGCACTGAGGAGAGCTTTCAAGGAGAAAGGAGAGAACGTTGGAGCATGGAGGCAGGCGTGCTACAAGCCACTTGTTGCCATGGCAGCTCGGCAAGGGTGGGACATCGATGCCATCTTCAACGCTCACCATCGCCTTGCAATCTGGTACGTACCCACCAAGCTCCGTCAGCTATGCCATGCCGAACGTAAC
		Platanus_racemosa              GTGACGAACCAGGTATTCAGATATGCAAAAAGGGCTGGAGCAAGCTACATAAACAAGCCAAAAATGAGACACTATGTGCACTGCTATGCTTTGCATTGCCTTGATGAAGACGCATCTAATGCACTGAGGAGAGCTTTCAAGGAGAAAGGAGAGAACGTTGGAGCATGGAGGCAGGCGTGCTACAAGCCACTTGTTGCCATGGCAGCTCGGCAAGGGTGGGACATCGATGCCATCTTCAACGCTCACCATCGCCTTGCAATCTGGTACGTACCCACCAAGCTCCGTCAGCTATGCCATGCCGAACGTAAC
		Platanus_orientalis            GTGACGAACCAGGTATTCAGATATGCAAAAAGGGCTGGAGCAAGCTACATAAACAAGCCAAAAATGAGACACTATGTGCACTGCTATGCTTTGCATTGCCTTGATGAAGACGCATCTAATGCACTGAGGAGAGCTTTCAAGGAGAAAGGAGAGAACGTTGGAGCATGGAGGCAGGCGTGCTACAAGCCACTTGTTGCCATGGCAGCTCGGCAAGGGTGGGACATCGATGCCATCTTCAACGCTCACCATCGCCTTGCAATCTGGTACGTACCCACCAAGCTCCGTCAGCTATGCCATGCCGAACGTAAC
		Platanus_occidentalis          GTGACGAACCAGGTATTCAGATATGCAAAAAGGGCTGGAGCAAGCTACATAAACAAGCCAAAAATGAGACACTATGTGCACTGCTATGCTTTGCATTGCCTTGATGAAGACGCATCTAATGCACTGAGGAGAGCTTTCAAGGAGAAAGGAGAGAACGTTGGAGCATGGAGGCAGGCGTGCTACAAGCCACTTGTTGCCATGGCAGCTCGGCAAGGGTGGGACATCGATGCCATCTTCAATGCTCACCATCGCCTTGCAATCTGGTACGTACCTACAAAGCTCCGTCAGCTCTGCCATGCCGAACGTAAC
		Platanus_mexicana              GTGACGAACCAGGTATTCAGATATGCAAAAAGGGCTGGAGCAAGCTACATAAACAAGCCAAAAATGAGACACTATGTGCACTGCTATGCTTTGCATTGCCTTGATGAAGACGCATCTAATGCACTGAGGAGAGCTTTCAAGGAGAAAGGAGAGAACGTTGGAGCATGGAGGCAGGCGTGCTACAAGCCACTTGTTGCCATGGCAGCTCGGCAAGGGTGGGACATCGATGCCATCTTCAATGCTCACCATCGCCTTGCAATCTGGTACGTACCTACAAAGCTCCGTCAGCTCTGCCATGCCGAACGTAAC
		Platanus_kerrii                GTGACGAACCAGGTATTCAGATATGCAAAAAGGGCTGGAGCAAGCTACATAAACAAGCCAAAAATGAGACACTATGTGCACTGCTATGCTTTGCATTGCCTTGATGAAGACGCATCTAATGCACTGAGGAGAGCTTTCAAGGAGAAAGGAGAGAACGTTGGAGCATGGAGGCAGGCGTGCTACAAGCCACTTGTTGCCATGGCAGCTCGGCAAGGGTGGGACATTGATGCCATCTTCAACGCCCACCATCGCCTTGCAATCTGGTACGTACCCACCAAGCTCCGTCAGCTCTGCCATGCCGAACGTAAC
		Eschscholzia_californica       GTGACGAATCAAGTATTTAGGTTTGCCAAGAAGGCAGGAGCTAGTTACATAAACAAGCCGAAGATGCGACATTATGTGCATTGTTATGCATTTCACTGTCTGGATGAGGAAGCTTCAAATGCATTAAGGAAAGGTTTTAAGGAGAGAGGAGAAAATGTGGGAGCTTGGAGACAAGCATGTTATGAGCCTCTTGTTGCCATGGCTGCACGTCAAGGTTGGGATATTGATGGCATATTTAACGCTCATCCTCGCCTTTCTATTTGGTATGTCCCTACCAAGCTTCGACAGCTCTGCCATGCCCAACGCCGA
		Vitis_vinifera                 GTGACGAACCAGGTGTTTAGATACGCGAAGAAGGCGGGAGCAAGCTACATCAACAAACCCAAGATGCGACACTACGTACATTGCTATGCTCTGCATTGTCTTGATGAGGAGGCTTCCAATGCCTTAAGGAGAGCTTTCAAGGAGAGAGGAGAGAACGTTGGGGCTTGGAGGCAGGCCTGTTACAAGCCTCTTGTCGCCCTTGCTGCTCGCCAAGGTTGGGACATCGATGCCATCTTCAATGCCCATCCCCGACTTGCTATCTGGTACGTACCCACCAGGCTTCGCCAACTCTGCCACTCCGAGCGCAGC
		Trochodendron_aralioides       GTGACAAACCAGGTGTTTAGATACGCGAAGAAGGCAGGTGCGAGTTACATAAACAAGCCCAAGATGAGACACTACGTACACTGCTACGCGCTGCACTGCCTGGATGAGGAGGTGTCCAACACTCTCAGGAGAGCTTTCAAGGAGAGAGGAGAAAACGTGGGCACATGGAGGCAAGCATGCTACAAACCCCTCGTTGCTATAGCGGCACTTCAAGGATGGGACATTGATGCCATCTTTAATGCCCACCCCCGCCTCTCTATCTGGTATGTCCCCACCAAGCTCCGTCAACTCTGCCATGCCGAACGTAGC
		Peperomia_sp                   GTGACGAACCAGGTGTTCAGATATGCAAAGAAGGTGGGGGCGAGCTACATCAACAAGCCCAAAATGAGGCACTATGTGCACTGCTACGCTCTGCATTGCTTGGACGAGGAGACGTCCAATGCGATGCGGAGGGCTTACAAGGAGAGGGGGGAGAACGTCGGGTCATGGCGGCAGGCCTGCTACAAGCCACTGGTGGCTATGGCCGCTGGGCAGGGGTGGGACATCGACGCCCTCTTCAACGGCGACCCTCGACTCCGCATCTGGTACGTCCCCACCAAGCTCCGCCAACTCTGCCACGCCGAGCGCGGC
		Oryza_sativa                   GTGACGAACCAGGTGTTCCGGTACGCGAAGAAGGTCGGGGCGAGCTACATCAACAAGCCCAAGATGCGGCACTACGTGCACTGCTACGCGCTGCACTGCCTGGACGAGGAGGCGTCGGACGCGCTGCGGCGCGCCTACAAGGCCCGCGGCGAGAACGTGGGGGCGTGGAGGCAGGCCTGCTACGCGCCGCTCGTCGACATCTCCGCGCGCCACGGATTCGACATCGACGCCGTCTTCGCCGCGCACCCGCGCCTCGCCATCTGGTACGTGCCCACCAGACTCCGCCAGCTCTGCCACCAGGCGCGGAGC
		Nymphaea_ororata               GTAACGAACCAGGTGTTCAGGTACGCCAAGAGCATGGGAGCAAGCTACATTAACAAGCCCAAGATGAGGCACTATGTCCACTGCTATGCGCTGCACTGCCTGGATGAGGCCTCATCAGATCGGCTACGGCGGGCATTCAAAGAGAGAGGGGAGAATGTGGGAGCCTGGAGGCAGGCCTGCTACCAGCCGCTTGTGGTCATGGCTGCACATCATTCGTGGGACATTGACGCCATATTCAATGCCAACGAGAAGCTCTGCATCTGGTATGTGCCCACCAAGCTGCGCCAACTCTGCCACCAGCAGCGCACC
	;
END;

BEGIN CODONS;
CODONPOSSET * CodonPositions = 
 N: 1 - 309 ; 
 CODESET * UNTITLED = Universal: all ; 
 END;

BEGIN ASSUMPTIONS;
OPTIONS DEFTYPE = unord PolyTcount = MINSTEPS ; 
 END;