NEXUS
[File created by TreeBASE:  7/26/07  21:09:22]
[Matrix accession#: M2540]

BEGIN TAXA;
	TITLE M2540;
	DIMENSIONS  NTAX=88;
	TAXLABELS
		Trichoderma_oblongisporum	Trichoderma_ovalisporum	Trichoderma_pubescens	Trichoderma_rossicum	Trichoderma_saturnisporum	Trichoderma_sinensis	Trichoderma_sp._MA3642	Trichoderma_sp._DAOM175924	Trichoderma_sp._PPRI3559	Trichoderma_spirale	Trichoderma_strigosum	Trichoderma_stromaticum	Trichoderma_tomentosum	Trichoderma_velutinum	Hypocrea_pachybasioides	Hypocrea_parapilulifera	Hypocrea_patella	Hypocrea_pezizoides	Hypocrea_phyllostachydis	Hypocrea_pilulifera	Hypocrea_poronoidea	Hypocrea_pseudokoningii	Hypocrea_psychrophila	Hypocrea_pulvinata	Hypocrea_rufa	Hypocrea_andinensis	Hypocrea_atrogelatinosa	Hypocrea_atroviridis	Hypocrea_aureoviridis	Hypocrea_aureoviridis_var.macrospora	Hypocrea_candida	Hypocrea_catoptron	Hypocrea_ceramica	Hypocrea_cerebriformis	Hypocrea_chlorospora	Hypocrea_chromosperma	Hypocrea_cinnamomea	Hypocrea_citrina_var._americana	Hypocrea_costaricensis	Hypocrea_crassa	Hypocrea_cremea	Hypocrea_cuneispora	Hypocrea_estonica	Hypocrea_flavoconidia	Hypocrea_gelatinosa	Hypocrea_hunua	Hypocrea_jecorina	Hypocrea_lacuwombatensis	Hypocrea_lixii	Hypocrea_lutea	Hypocrea_megalosulphurea	Hypocrea_melanomagnum	Hypocrea_minutispora	Hypocrea_muroiana	Hypocrea_neorufa	Hypocrea_nigrovirens	Hypocrea_novaezelandiae	Hypocrea_orientalis	Hypocrea_schweinitzii	Hypocrea_semiorbis	Hypocrea_sinuosa	Hypocrea_sp._WJ2305	Hypocrea_stellata	Hypocrea_stilbohypoxyli	Hypocrea_straminea	Hypocrea_strictipilosa	Hypocrea_sulawesensis	Hypocrea_sulfurea	Hypocrea_surrotunda	Hypocrea_tawa	Hypocrea_thailandica	Hypocrea_thelephoricola	Hypocrea_virens	Hypocrea_virescentiflava	Trichoderma_aggressivum	Trichoderma_asperellum	Trichoderma_brevicompactum	Trichoderma_cerinum	Trichoderma_effusum	Trichoderma_erinaceum	Trichoderma_fertile	Trichoderma_ghanense	Trichoderma_hamatum	Trichoderma_helicum	Trichoderma_konilangbra	Trichoderma_koningii	Trichoderma_longibrachiatum	Trichoderma_longipile
	;
END;

BEGIN CHARACTERS;
	TITLE M2540;
	DIMENSIONS NCHAR=359;
	FORMAT DATATYPE = DNA MISSING = ? GAP = -  ;
	MATRIX
		Trichoderma_oblongisporum                  GTTGCCTCGGCGGG---A-----TTCT---CAAGCCCCGGGTGCGTCGCAGCCCCGGA--CCAAGGCGCCC-GCCGG-AGG--------ACCAACC---AAAA-CTCTTTTT-------GT-AT-A-------------CCCCCT-CGCGGG-----TTTTTTT-----A--TAA--------TCTGAGCC----TTCTCGG-CGCC-TCT-CGTAGG-CGTTTCGAA--GCGTTGGGG-A--TCGGCCC--TCCCTCT-----GC-GGG-GGCCGTCTCCGAAATACAGTGGCGGTCTCGCCGCAGCCTC-TCCTGCGCAGTAG-TTTGCACA-CTCGCATCGGGA-GCGCGGCGCGT
		Trichoderma_ovalisporum                    GTTGCCTCGGCGGGG-----------T---CACGCCCCGGGTGCGTCGCAGCCCCGGAA-CCA-GGCGCCC-GCCGG-AGGG-------ACCAACC---AAA--CTCTTT-------CTGT-A--GT------------CCCC-T-CGCGGACG---TT----------ATTT-CTTACAGCT-CTGAGCAAAAA---------------------------TTC-AA--GCGTTGGGG-A--TCGGG-AA-CCCCTAAG-A---CGGGAT-CCCGGCCCCGAAATACAGTGGCGGTCTCGCCGCAGCCTC-TCCTGCGCAGTAG-TTTGCACAACTCGCACCGGGA-GCGCGGCGCGT
		Trichoderma_pubescens                      GTTGCCTCGGCGGGG-----------T---GACGCCCCGGGTGCGTAAAAGCCC-GGAA-CCA-GGCGCCC-GCCGG-AGG-------AACCAACC---AAA--CTCTTT-------CTGT-A--GT------------CCCC-T-CGCGGACG---TT----------ATTT-CTTACAGCT-CTGAGCAAAAAA--------------------------TTC-AA--GCGTTGGGG-A--TCGGG-A--CCCCTCAC-----CGGG-TG-CCGGCCCTGAAATACAGTGGCGGTCTCGCCGCAGCCTC-TCCTGCGCAGTAG-TTTGCACAACTCGCACCGGGA-GCGCGGCGCGT
		Trichoderma_rossicum                       GTTGCCTCGGCGGG---A------TCT---C-TGCCCCGGGCGCGTCGCAGCCCCGGA--CCAAGGCGCCC-GCCGG-AGG--------ACCAACCC--AAAA-CTCTTTTT-------GT-AT-A-------------CCCCCT-CGCGGG-----TTTTTTTT----A----------CTT-CTGAG--AACTT-CTCGG-CGCCC-CT-AGCGGG-CGTTTCGAA--GCGTTGGGG-A--TCGGCCC------TTTC-A---CCGGGT-GCCGGCCCCTAAATACAGTGGCGGTCTCGCCGCAGCCTC-TCATGCGCAGTAG-TTTGCACA-CTCGCACCGGGA-GCGCGGCGCGT
		Trichoderma_saturnisporum                  GTTGCCTCGGCGGG---A------TCT---CTTGCCCCGGGCGCGTCGCAGCCCCGGATCCCATGGCGCCC-GCCGG-AGG--------ACCAACTC--AAA--CTCTTTTT---C-CTCTCC--GTC--GCGGC----TTCCGT-CGCGGCTC-TGTTTT--------ATTTTT-----GCT-CTGAGCC---TTTCTCGG-CGACC-CT-AGCGGG-CGTCTCGAA--GCGTTGGGG-A--TCGGCCCC-----TCAC-----CG----GGCCGCCCCCGAAATCCAGTGGCGGTCTCGCCGCAGCCTC-TCCTGCGCAGTAG-TTTGCACA-CTCGCACCGGGA-GCGCGGCGCGG
		Trichoderma_sinensis                       GTTGCCTCGGCGGG---A------TCT---CTTGCCCCGGGCGCGTCGCAGCCCCGGATCCCATGGCGCCC-GCCGG-AGG--------ACCAACC---AAA--CTCTTT-----CTCTCTCTCCGTC--GCGGC----TCCCGT-CGCGGCTC-TGTTTT--------ATTTTT-----GCT-CTGAGCC---TTTCTCGG-CGACC-CT-AGCGGG-CGTCTCGAA--GCGTTGGGG-A--TCGGCCCC-----TCAC-----CG----GGCCGCCCCCGAAATCCAGTGGCGGTCTCGCCGCAGCCTCCTCCTGCGCAGTAG-TTTGCACA-CTCGCACCGGGA-GCGCGGCGCGG
		Trichoderma_sp._MA3642                     GTTGCCTCGGCGGG---A------TCT---C-TGCCCCGGGCGCGTCGCAGCCCCGGATCCCATGGCGCCC-GCCGG-AGG--------ACCAACC---AAA--CTCTTTTT---CTCTCTCC--GTC--GCGGC----T-CCGT-CGCGGCTC-TGTTTT--------ATTTTT-----GCT-CTGAGCC---TTTCTCGG-CGACC-CT-AGCGGG-CGTCTCGAA--GCGTTGGGG-A--TCGGCCCC--C--TCAC-----CGG---GGCCGCCCCCGAAATCCAGTGGCGGTCTCGCCGCAGCCTC-TCCTGCGCAGTAG-TTTGCACA-CTCGCACCGGGA-GCGCGGCGCGG
		Trichoderma_sp._DAOM175924                 GTTGCCTCGGCGGG---A------TCT---C-TGCCCCGGGTGCGTCGCAGCCCCGGA--CCAAGGCGCCC-GCCGG-AGG--------ACCAACC---AAAA-CTCTTATT-------GT-AT-A-------------CCCCCT-CGCGGG-----TTTTTT------A--TAA--------TCTGAGCC----TTCTCGG--GCCC-CT-CGTGGG-CGTTTCGAA--GCGTTGGGG-A--TCGGCCC--TCCCTCT-----GC-GGG-GGCCGTCTCCGAAATACAGTGGCGGTCTCGCCGCAGCCTC-TCCTGCGCAGTAG-TTTGCACA-CTCGCACCGGGA-GCGCGGCGCGT
		Trichoderma_sp._PPRI3559                   GTTGCCTCGGCGGG---A------TCT---C-TGCCCCGGGCGCGTCGCAGCCCCGGA--CCAAGGCGCCC-GCCGG-AGG--------ACCAACCC--AAAA-CTCTTTAT-------GT-AT-A-------------CCCCCT-CGCGGG-----TTTTTT------A----------CTT-CTGAG---ACTTTCTCGG-CGCCC-CT-AGCGGG-CGTTTCGAA--GCGTTGGGG-A--TCGGCCC------TTTC-A---CCGGGT-GCCGCCCCCTAAATGCAGTGGCGGTCTCGCCGCAGCCTC-TCATGCGCAGTAG-TTTGCACA-CTCGCACCGGGA-GCGCGGCGCGT
		Trichoderma_spirale                        GTTGCCTCGGCGGG---A------TCT---C-TGCCCCGGGTGCGTCGCAGCCCCGGA--CCAAGGCGCCC-GCCGG-AGG--------ACCAACC---AAAA-CTCTTTT--------GT-AT-A-------------CCCCCT-CGCGGG-----TTTTT-------A--TATA-------TCTGAGCC-A---TCTCGG-CGCC-TCT-CGTAGG-CGTTTCGAA--GCGTTGGGG-A--TCGGCCC------TTT--A---C-GG--GGCCGGCCCCGAAATACAGTGGCGGTCTCGCCGCAGCCTC-TCCTGCGCAGTAG-TTTGCACA-CTCGCATCGGGA-GCGCGGCGCGT
		Trichoderma_strigosum                      GTTGCCTCGGCGGGG-----------T---CACGCCCCGGGCGCGTCGCAGCCC-GGAA-CCA--GCGCCC-GCCGG-AGG-------AACCAACC---AAA--CTCTTTA------CTGT-A--GT------------CCCC-T-CCCGGACG---TT----------TTTA-CTTACAGCT-CTGAGCAAAAA---------------------------TTC-AA--GCGTTGGGG-A--TGCGGGAA-CCCCTAAG-A---CGGGAT-CCCGGCCCCGAAATACAGTGGCGGTCTCGCCGCAGCCTC-TCCTGCGCAGTAG-TTTGCACAACTCGCACCGGGA-GCGCGGCGCGT
		Trichoderma_stromaticum                    GTTGCCTCGGCGGG---A------TCT---C-TGCCCCGGGCGCGTCGCAGCCCCGGA--CCAAGGCGCCC-GCCGG-AGG--------ACCAACCC--AAAA-CTCTTTAT-------GT-AT-A-------------CCCCCT-CGCGGG-----TTTTTT------A----------CTT-CTGAG---ACTTTCTCGG-CGCCC-CT-AGCGGG-CGTTTCGAA--GCGTTGGGG-A--TCGGCCCCG----T--C-A---CCGGGT-GCCGTCCCCCAAATACAGTGGCGGTCTCGCCGCAGCCTC-TCATGCGCAGTAG-TTTGCACA-CTCGCACCGGGA-GCGCGGCGCGT
		Trichoderma_tomentosum                     GTTGCCTCGGCGGG---AA------CT---CATGCCCCGGGTGCGTCGCAGCCCCGGA--CCAAGGCGCCC-GCCGG-AGG--------ACCAACC---AAAA-CTCTTTTT-------GT-AT-A-------------CCCCCT-CGCGGG-----TTTTTT------A--TAA--------TCTGAGCC----TTCTCGG-CGCC-TCT-CGTAGG-CGTTTCGAA--GCGTTGGGG-A--TCGGCC---TCCCTCT-----GC-GGG-GGCCGTCTCCGAAATACAGTGGCGGTCTCGCCGCAGCCTC-TCCTGCGCAGTAG-TTTGCACA-CTCGCATCGGGA-GCGCGGCGCGT
		Trichoderma_velutinum                      GTTGCCTCGGCGGG---A------TCTT--C-TGCCCCGGGTGCGTCGCAGCCCCGGA--CCAAGGCGCCC-GCCGG-AGG-------AATCAACC---AAAA-CTCTTATT-------GT-AT-A-------------CCCCCT-CGCGGG-----TTTTTTT-----A--TAA--------TCTGAGCC----TTCTCGG-CGCC-TCT-CGTAGG-CGTTTCGAA--GCGTTGGGG-A--TCGGCC----TCCTTTC-A---C-GGG-GGCCGTCTCCGAAATACAGTGGCGGTCTCGCCGCAGCCTC-TCCTGCGCAGTAG-TTTGCACA-CTCGCATCGGGA-GCGCGGCGCGT
		Hypocrea_pachybasioides                    GTTGCCTCGGCGGG---AA-----T-TT--CATGCCCCGGGCGCGTCGCAGCCCCGGA--CCAAGGCGCCC-GCCGG-AGG--------ACCAACC---AAAA-CTCTTTT--------GT-AT-GT------------CCCC-T-CGCGGAC----TTTT--------A--TAAT-------TCTGAACC-A---TCTCGG-CGCCC-CTTAGCGGG-CGTTTCGAA--GCGTTGGGG-A--TCGGCCC------TTT--A---CC----GGCCGGCCCCGAAATACAGTGGCGGTCTCGCCGCAGCCTC-TCCTGCGCAGTAG-TTTGCACA-CTCGCATCGGGA-GCGCGGCGCGT
		Hypocrea_parapilulifera                    GTTGCCTCGGCGGG---AAA----T-T---CATGCCCCGGGCGCGTCGCAGCCCCGGA--CCAAGGCGCCC-GCCGG-AGG--------ACCAACC---AAAA-CTCTTTT--------GT-AT-GT------------CCC--T-CGCGGAC----TTTT--------A--TAAT-------TCTGAACC-A---TCTCGG-CGCCC-CT-AGCGGG-CGTTTCGAA--GCGTTGGGG-A--TCGGCCC------TT---A---CC----GGCCGGCCCCGAAATACAGTGGCGGTCTCGCCGCAGCCTC-TCTTGCGCAGTAG-TTTGCACA-CTCGCATCGGGA-GCGCGGCGC--
		Hypocrea_patella                           GTTGCCTCGGCGGG---A------TCT---CTTGCCCCGGGCGCGTCGCAGCCCCGGATCCCACGGCGCCC-GCCGG-AGG--------ACCAACCAAAGAAA-CTCC-------CTCTCTCC--GTCGCGCG-CGCCCTCGCGC-CGCGGCCC-TGTCTTTTT-----ACCTT------GCT-CTGAGCC---TTTCTCGG-CGACC-CT-AGCGGG-CGTCTCGAA--GCGTTGGGG-A--CCGGCCCC-----TCGC--GGGCG------CCGCCCCCNAAATCCAGTGGCGGTCCCGCCGCAGCCTC-TCCTGCGCAGTAG-TTTGCACG-CTCGCACCGGGA-GCGCGGCGCGG
		Hypocrea_pezizoides                        GTTGCCTCGGCGGGG-----------T---CACGCCC-GGGCGCATCGCAGCCCCGGAA-CCA-GGCGCCC-GCCGC-AGG--------ACCGACC---AAACACCCTTTT--------GC-A--G-------------CCCC-T-CGCGGGCG---T-----------ATTT-CTCGCAGCT-CTGAGCACGAAA--------------------------TTC-AA--GCGTTGGGG-A--TCGGG-A-CCCGCCCAG-----CGG--TG-CCGGCCCCGAAATCCAGTGGCGGTCTCG-CGCGGCCTTCCCATGCGCAGTAG-TTTGCACGACTCGCACCGGGA-GCGCGGCGCGG
		Hypocrea_phyllostachydis                   GTTGCCTCGGCGGG---A------TCA---C-TGCCCCGGGCGCGTCGCAGCCCCGGA--CCAAGGCGCCC-GCCGG-AGG--------ACCAACCC--AAAA-CTCTTGTTT------GT-AT-A-------------CCCCCT-CGCGGG-----TTTTCTCTT---A-CA---------TTCTGAGCC----TTCTCGG-CGCCCCC--CGTGGG-CGTTTCGAA--GCGTTGGGG-A--TCGGCCCC-----T--C-A---CCGG---GCCGGCCCCGAAATACAGTGGCGGTCTCGCCGCAGCCTC-TCCTGCGCAGTAG-TTTGCACA-CTCGCATCGGGA-GCGCGGCGCGC
		Hypocrea_pilulifera                        GTTGCCTCGGCGGG-TCA------T-T---CATGCCCCGGGCGCGTCGCAGCCCCGGA--CCAAGGCGCCC-GCCGG-AGG--------ACCAACC---AAAA-CTCTTTT--------GT-AT-GT------------CCC--T-CGCGGAC----TTTTTT------A--TAAT-------TCTGAACC-A---TCTCGG-CGCCC-CT-AGCGGG-CGTTTCGAA--GCGTTGGGG-A--TCGGCCC------TTT--A---CC----GGCCGGCCCCGAAATACAGTGGCGGTCTCGCCGCAGCCTC-TCCTGCGCAGTAG-TTTGCACA-CTCGCATCGGGA-GCGCGGCGCGT
		Hypocrea_poronoidea                        GTTGCCTCGGCGGG---A------TCT---CT-GCCCCGGGCGCGTCGCAGCCCCGGATCCCATGGCGCCC-GCCGG-AGG--------ACCAACCC-GAAA--CTCTTTT-----TCTCTCC--GT----CG-CGA--TTCC-T-CGCGGCTC-TGTTTTT-------ATTTT------GCT-CTGAGCC---TTTCTCGG-CGACC-CT-AGCGGG-CGTCTCGAA--GCGTTGGGG-A--TCGGCCCC-----TCAC-----CG----GGCCGCCCCCTAAATCCAGTGGCGGTCTCGCCGCAGCCTC-TCCTGCGCAGTAG-TTTGCACA-CTCGCACCGGGA-GCGCGGCGCGG
		Hypocrea_pseudokoningii                    GTTGCCTCGGCGGG---A------TCT---C-TGCCCCGGGCGCGTCGCAGCCCCGGACCCCATGGCGCCC-GCCGG-AGG--------ACCAACC---AAA--CTCTTTTT----TCTCTCC--GTC--GCGGC---CTA-CGT-CGCGGCTC-TGTTTT--------AT-TTT-----GCT-CTGAGCC---TTTCTCGG-CGACC-CT-AGCGGG-CGTCTCGAA--GCGTTGGGG-A--TCGGCCCC-----TCAC-----CG----GGCCGCCCCCGAAATCCAGTGGCGGTCTCGCCGCAGCCTC-TCCTGCGCAGTAG-TTTGCACA-CTCGCACCGGGA-GCGCGGCGCGG
		Hypocrea_psychrophila                      GTTGCCTCGGCGGG---A--------T---C--GCCCCGGGCGCGTCGCAGCCCCGGA--CCCAGGCGCCC-GCCGG-AGG--------ACCAGT----AAA--CTCCATT--------GT-A----------------------------------TTTGTGTACC----TTA------CTT-CTGAGC----TTTCTCGG-CGCTCCC--AGCGAG-CGTTACGAA--GCGTTGGGG-A--TCGGCACCCCGCCCTCAAAA-GCGGG--AGCCGGCCCCGAAATGCAGTGGCGGTCTCGCCGCAGCCTC-TCCTGCGCAGTAGCTT-GCACA-CTCGCACCGGGA-GCGCGGCGCGG
		Hypocrea_pulvinata                         GTTGCCTCGGCGGG-TTAAA-----CTCTTC-TGCCCCGGGCGCGTCGCAGCCCCGGA--CCAAGGCGCCC-GCCGG-AGG--------ACCAACTCGCAAA--CTCTTTTT-------GT-ATCAT------------CCC-AT-CGCGGA-----TTTT--CT----AATAA------CTT-CTGAGC----TTTCTCGG-CGCCC-CT-AGCGGG-CGTTTCGAA--GCGTTGGGG-A--TCGGC-------TT-AC-A--CC----T-GCCGGCCCCGAAATACAGTGGCGGTCTCGCCGCAGCCTC-TCCTGCGCAGTAG-TTTGCACA-CTCGCAACGGGA-GCGCGGCGCGT
		Hypocrea_rufa                              GTTGCCTCGGCGGGG-----------T---CACGCCCCGGGTGCGTCGCAGCCCCGGAA-CCA-GGCGCCC-GCCGG-AGGG-------ACCAACC---AAA--CTCTTT-------CTGT-A--GT------------CCCC-T-CGCGGACG---TT----------ATTT--TTACAGCT-CTGAGCAAAAA---------------------------TTC-AA--GCGTTGGGG-ACTTCGGG-AA-CCCCTAAG-A---CGGGAT-CCCGGCCCCGAAATACAGTGGCGGTCTCGCCGCAGCCTC-TCATGCGCAGTAG-TTTGCACAACTCGCACCGGGA-GCGCGGCGCGT
		Hypocrea_andinensis                        GTTGCCTCGGCGGG---A------TCT---C-TGCCCCGGGCGCGTCGCAGCCCCGGATCCCATGGCGCCC-GCCGG-AGG--------ACCAACC---AAA--CTCTTTTT----TCTCTCC--GTCGCGTG-CC---TCGCGC-AGCGGCTC-TGTTAT--------ACTTTTTTT--GCT-CTGAGCC---TTTCTCGG-CGACC-CT-AGCGGG-CGTCTCGAA--GCGTTGGGG-A--TCGGCCCC-----TCAC-----CG----GGCCGCCCCCGAAATACAGTGGCGGTCTCGCCGCAGCCTC-TCCTGCGCAGTAG-TTTGCACA-CTCGCACCGGGA-GCGCGGCGCGG
		Hypocrea_atrogelatinosa                    GTTGCCTCGGCGGG---AA------CT---CATGCCCCGGGCGCGTCGCAGCCCCGGA--CCAAGGCGCCC-GCCGG-AGG--------ACCGACC---AAAA-CTCTTCTT-------GT-AT-A-------------CCCCCT-CGCGGG-----TTT---CCCC--A--TAA--------TCTGAGCC----TTCTCGG-CGCC-TC-CCGTAGG-CGTTTCGAA--GCGTTGGGG-A--TCGGCCC---TCCTCTC----GC-GGG-GGCCGTCTCCGAAATGCAGTGGCGGTCTCGCCGCAGCCTC-TCCTGCGCAGTAG-TTTGCACA-CTCGCACCGGGA-GCGCGGCGCGT
		Hypocrea_atroviridis                       GTTGCCTCGGCGGGG-----------T---CACGCCCCGGGTGCGTCGCAGCCCCGGAA-CCA-GGCGCCC-GCCGG-AGGG-------ACCAACC---AAA--CTCTTTT------CTGT-A--GT------------CCCC-T-CGCGGACG---TT----------ATTT-CTTACAGCT-CTGAGCAAAAA---------------------------TTC-AA--GCGTTGGGG-ACCTCGGG-AG-CCCCTAAG-A---CGGGAT-CCCGGCCCCGAAATACAGTGGCGGTCTCGCCGCAGCCTC-TCCTGCGCAGTAG-TTTGCACAACTCGCACCGGGA-GCGCGGCGCGT
		Hypocrea_aureoviridis                      GTTGCCTCGGCGGG---A------TCT---C-TGCCCCGGGCGCTTCGCGGCCCCGGA-CCCAAGGCGCCCCGCCGG-AGG----AAGAAACAACC---AAAA-CT--CCTTTT-CCCC---AT-GCCCTCGCAC-G--CCCCCT-CGCGGG-----CCGCGTCGGGCTCTCT---------CTCTGAGCAAAACTTCTCGG-CGCCCC-TCACCGGG-CGCCTCGAA--GCGTTGGGG-A--TCGGCCTCCTCCCTCCG-CGGGCGGGG-GGCCGGCCCCGAAATTCAGTGGCGGTCTCGCCGCAGCCTC-TCCTGCGCAGTAG-TTTGCACA-CTCGCACCGGGA-GCGCGGCGCGT
		Hypocrea_aureoviridis_var.macrospora       GTTGCCTCGGCGGG---A------TCT---C-TGCCCCGGGCGCGTCGCAGCCCCGGA--CCAAGGCGCCC-GCCGGRRG---------ACCAACC---AAAAACCCTT----------GT-AT-G-------------CCCCCT-CGCGGG-----TTTTTTTTT---A----------CTGTCTGAGCC-A---TCTCGG-CGCCC-CT-CGCGGG-CGTTTCGAA--GCGTTGGGG-A--TCGGCCC------TTT--A---CC----GGCCGGCCCCGAAATACAGTGGCGGTCTCGCCGCAGCCTC-TCCTGCGCAGTAG-TTTGCACA-CTCGCACCGGGA-GCGCGGCGCAG
		Hypocrea_candida                           GTTGCCTCGGCGGG---A------TCT---C-TGCCCCGGGCGCGTCGCAGCCCCGGA-CCCACGGCGCCC-GCCGG-AGG--AAAAAAAACAACC---AAAA-CTCTCCTTTAC----GC-AT-G-------------CCCCCT-CGCGGG----CTGCC---------C-TATA------CTCTGAGC-AA-CTTCTCGG-CGCCCC-TCAGCGGG-CGTTCCGAA--GCGTTGGGG-A--TCGGCCC-CTCCCTT-----CGCGGGG-GGCCGGCCCCGAAATGCAGTGGCGGTCTCGCCGCAGCCTC-TCCTGCGCAGTAG-TTTGCACA-CTCGCAACGGGA-GCGCGGCGCGT
		Hypocrea_catoptron                         GTTGCCTCGGCGGG---A------TCTT--C-TGCCCCGGGCGCGTCGCAGCCCCGGA--CCAAGGCGCCC-GCCGG-AGG--------ACCAACC---AAAAACTCCCTTC-------GC-AT-G-------------CCCCCT-CGCGGG-----TTTTTT---C--AC--AA--------TCTGAGCC----TTCTCGG-CGCCC-CT-CGTGGG-CGTTTCGAA--GCGTTGGGG-A--TCGGCC---TCCCTCT-----GC-GGG-GGCCGTCTCCGAAATGCAGTGGCGGTCCCGCCGCAGCCTC-TCCTGCGCAGTAG-TTTGCACA-CTCGCACCGGGA-GCGCGGCGCGC
		Hypocrea_ceramica                          GTTGCCTCGGCGGG---A------TCT---C-TGCCCCGGGCGCGTCGCAGCCCCGGA--CCAAGGCGCCC-GCCGG-AGG--------ACCAACCC--AAA--CTCTTATT-------GT-AT-A-------------CCCCCT-CGCGGG-----TTTTTTCT----A-C-A------CTATCTGAGCC-A---TCTCGG-CGCCCC-T-CGCGGG-CGTTTCGAA--GCGTTGGGG-A--TCGGCCC------TTTC-A---CCGGG--GCCGGCCCCGAAATGCAGTGGCGGTCTCGCCGCAGCCTC-TCCTGCGCAGTAG-TTTGCACA-CTCGCACCGGGA-GCGCGGCGCGT
		Hypocrea_cerebriformis                     GTTGCCTCGGCGGG---A-----TTCT---CTTGCCCCGGGCGCGTCGCAGCCCCGGATCCCATGGCGCCC-GCCGG-AGG--------ACCAACTCC-AAA--CTCTTTTTT---TCTCTCC--GTC--GCGGC----TCCCGT-CGCGGCTC-TGTTTT--------ATTTTT-----GCT-CTGAGCC---TTTCTCGG-CGACC-CT-AGCGGG-CGTCTCGAA--GCGTTGGGG-A--TCGGCCCC-----TCAC-----CG----GGCCGCCCCCGAAATACAGTGGCGGTCTCGCCGCAGCCTC-TCCTGCGCAGTAG-TTTGCACA-CTCGCACCGGGA-GCGCGGCGCGG
		Hypocrea_chlorospora                       GTTGCCTCGGCGGG---A------TCT---C-TGCCCCGGGCGCGTCGCAGCCCCGGA--CCAAGGCGCCC-GCCGG-AGG-----AAAAACAACC---AAAA-CTCTTTT--------GT-AT-A-------------CCCCCT-CGCGGG-----TTTTCTT-----A-----------CTTCTGAG--AA-CTTCTCGG-CGCCCC-TTAGCGGG-CGTTTCGAA--GCGTTGGGG-A--TCGGCCC--TCCCT--T---CGCGGGGCGGCCGGCCCCGAAATACAGTGGCGGTCTCGCCGCAGCCTC-TCCTGCGCAGTAG-TTTGCACA-CTCGCATCGGGA-GCGCGGCGCGT
		Hypocrea_chromosperma                      GTTGCCTCGGCGGG---A------TCT---C-AGCCCCGGGCGCGTCGCAGCCCCGGA--CCAAGGCGCCC-GCCGG-AGG--------ACCGACCCCGAAA--CTCTT----------------GCCGCAACGA----CCCCCT-CGCGGG-----TCTCGCCCC-T-CACCG---------TCTGAGCC-A---CCTCGG-CGCCCC-T-CGCGGG-CGTTCCGAA--GCGTTGGGG-A--TCGGCCCCCCC-------A---CC--GGGGCCGGCCCCGAAATCCAGTGGCGGTCACGCCGCGGCCTC-CCCTGCGCAGTAGCTT-GCACA-CTCGCAACGGGA-GCGCGGCGCGC
		Hypocrea_cinnamomea                        GTTGCCTCGGCGGG---A------TCTT--C-TGCCCCGGGCGCGTCGCAGCCCCGGA--CCAAGGCGCCC-GCCGG-AGG-------AACCAACC---AAAA-CTCTT----------GC-AT-A-------------CCCCCT-CGCGGG-----TTTTTT--CC--AC--AA--------TCTGAGCC----TTCTCGG-CGCCC-CT-CGCGGG-CGTTCCGAA--GCGTTGGGG-A--TCGGCCCTCCTC-T--C----GC-GGG-GGCCGTCTCCGAAATACAGTGGCGGTCTCGCCGCAGCCTC-CCCTGCGCAGTAGCTT-GCACA-CTCGCACCGGGA-GCGCGGCGCGT
		Hypocrea_citrina_var._americana            GTTGCCTCGGCGGG-TTAATT---T-TT--C-TGCCCCGGGCGCGTCGCAGCCCCGGA--CCAAGGCGCCC-GCTGG-AGG--------ACCAACTCGCAAA--CTCTTTTT-------GT-ATCAT------------CCC-TT-CGCGGA-----TTTT--CT----AT-TA------CTT-CTGAGC----TTTCTCGG-CGC-CCCT-AGCGGG-CGTTTCGAA--GCGTTGGGG-A--TCGGC--------TTAC-A---CC---T-GCCGGCTCCGAAATATAGTGGCGGTCTCGCCGCAGCCTC-TCCTGCGCAGTAG-TTTGCACA-CTCGCAACGGGA-GCGCGGCGCGT
		Hypocrea_costaricensis                     GTTGCCTCGGCGGG---A------TCT---C-TGCCCCGGGCGCGTAGCAGCCCCGGA--CCAAGGCGCCC-GCCGG-AGGAAAAAAAAAACAACC---AAAA-C--CCCT--T-----GC-AT-A-------------CCCCCC-CGCGGG-----TTTTTTAT----AC-----------CTCTGAG--AA-CTTCTCGG-CGCCCC-TCCGCGGG-CGCCCCGAA--GCGTTGGGG-A--TCGGCCC--TCCCT------CGCGGG-CGGCCGGCCCCGAAATGCAGTGGCGGTCCCGCCGCAGCCTC-CCCTGCGCAGTAGCTT-GCACA-CTCGCACCGGGA-GCGCGGCGCGC
		Hypocrea_crassa                            GTTGCCTCGGCGGG---A------TCT---C-TGCCCCGGGTGCGTCGCAGCCCCGGA--CCAAGGCGCCC-GCCGG-AGG--------ACCAACC---AAAA-CTCTTTAT-------GT-AT-A-------------CCCCCT-CGCGGG-----TTTTTT------A-C-AA--------TCTGAGCC-A---TCTCGG-CGCCC-CT-CGTGGG-CGTTTCGAA--GCGTTGGGG-A--TCGGCCC------TTT--A---C-GG--GGCCGGCCCCGAAATACAGTGGCGGTCTCGCCGCAGCCTC-TCCTGCGCAGTAG-TTTGCACA-CTCGCATCGGGA-GCGCGGCGCGT
		Hypocrea_cremea                            GTTGCCTCGGCGGG---A------TCT---C-TGCCCCGGGCGCGTCGCAGCCCCGGA--CCAAGGCGCCC-GCCGG-AGG----AAAAAACAACC---AAAA-CTCTTTTT-------GT-AT-A-------------CCCCCT-CGCGGG-----TTTTTT------A-----------CTTCTGAG--AA-CTTCTCGG-CGCCCC-TTTGCGGG-CGTTTCGAA--GCGTTGGGG-A--TCGGCCA-CTCCCTCCT-CTTTGGGGGCGGCCGGCCCCGAAATACAGTGGCGGTCTCGCCGCAGCCTC-TCCTGCGCAGTAG-TTTGCACA-CTCGCATCGGGA-GCGCGGCGCGT
		Hypocrea_cuneispora                        GTTGCCTCGGCGGG---A------TCT---C-TGCCCCGGGTGCGTCGCAGCCCCGGA--CCAAGGCGCCC-GCCGG-AGG--------ACCAACC---AAAA-CTCTTTAT-------GT-AT-A-------------CCCCCT-CGCGGG-----TTTTTT------A-C-AA--------TCTGAGCC-A---TCTCGG-GGCCC-CT-CGTGGG-CGTTTCGAA--GCGTTGGGG-A--TCGGCCC------TTT--A---C-GG--GGCCGGCCCCGAAATACAGTGGCGGTCTCGCCGCAGCCTC-TCCTGCGCAGTAG-TTTGCACA-CTCGCATCGGGA-GCGCGGCGCGT
		Hypocrea_estonica                          GTTGCCTCGGCGGG---A------TCT---C-TGCCCCGGGCGCGTCGCAGCCCCGGA--CCAAGGCGCCC-GCCGG-AGG--------ACCAACCC--AAA--CTCTT-ATTT-----GT-A-CA-------------CCCCCT-CGCGGG-----TTTGTTTTTTTTA----------CTGTCTGAGCC-AC---CTCGG-CGCCC-CT-CGCGGG-CGTTCCGAA--GCGTTGGGG-A--TCGGCCC------TTTC-A---CCGGG--GCCGGCCCCGAAATGCAGTGGCGGTCTCGCCGCAGCCTC-TCCTGCGCAGTAG-TTTGCACA-CTCGCACCGGGA-GCGCGGCGCGT
		Hypocrea_flavoconidia                      GTTGCCTCGGCGGGG-----------T---CACGCCCCGGGCGCGTAGAAGCCCCGGAA-CCA-GGCGCCC-GCCGG-AGGG-------ACCGACC---AAA--CTCTTT-------CTGT-A--GT------------CCCC-T-CGCGGACG---T-----------ATTT-CTTACAGCT-CTGAGCAAAAA---------------------------TTC-AA--GCGTTGGGG-A--TCGGG-A--CCCCTCAC-----CGGG-TG-CCGGCCCCGAAATGCAGTGGCGGTCTCGCCGCAGCCTC-TCCTGCGCAGTAG-TTTGCACAACTCGCACCGGGA-GCGCGGCGCGT
		Hypocrea_gelatinosa                        GTTGCCTCGGCGGG---A------TAT---C-TGCCCCGGGCGCGTCGCAGCCCCGGA--CCAAGGCGCCC-GCCGG-AGG--------ACCAACCCC-AAA--CCCTTTGCC------GC-AT-G-------------CCCCCT-CGCGGGCTCTTTTTTGTTTCT--A--CAG--------TCTGAGCCG----TCTCGG-CGCCCC-T-CGCGGG-CGTTCCGAA--GCGTTGGGG-A--TCGGCCCCC----T-C--A---CC--GGGGCCGGCCCCGAAATGCAATGGCGGTCTCGCCGCA-----------------------------------------------------
		Hypocrea_hunua                             GTTGCCTCGGCGGG---A------T-TT--C-TGCCCCGGGCGCGTCGCAGCCCCGGA--CCAAGGCGCCC-GCCGG-AGG--------ACCAACCC--AAAA-CTCTTTTT-------GT-AT-A-------------CCCCCT-CGCGGG-----TTTTTTT-----A--TA---------TCTGAGCC----TTCTCGG-CGCCC-CT-AGTGGG-CGTTTCGAA--GCGTTGGGG-A--TCGGCCC------TTA--A---CC----GGCCGGCCCCGAAATACAGTGGCGGCCTCGCCGCAGCCTC-TCATGCGCAGTAG-TTTGCACA-CTCGCACCGGGA-GCGCGGCGCGG
		Hypocrea_jecorina                          GTTGCCTCGGCGGG---A-----TTCT---C-TGCCCCGGGCGCGTCGCAGCCCCGGATCCCATGGCGCCC-GCCGG-AGG--------ACCAACTC--AAA--CTCTTTTT----TCTCTCC--GTC--GCGGC----TTCCGT-CGCGGCTC-TGTTTT--------ACCTTT-----GCT-CTGAGCC---TTTCTCGG-CGACC-CT-AGCGGG-CGTCTCGAA--GCGTTGGGG-A--TCGGCCCC-----TCAC-----CG----GGCCGCCCCCGAAATACAGTGGCGGTCTCGCCGCAGCCTC-TCCTGCGCAGTAG-TTTGCACA-CTCGCACCGGGA-GCGCGGCGCGG
		Hypocrea_lacuwombatensis                   GTTGCCTCGGCGGG---AA-----T-T---CATGCCCCGGGCGCGTCGCAGCCCCGGA--CCAAGGCGCCC-GCCGG-AGG--------ACCAACC---AAAA-CTCTTTT--------GT-AT-GT------------CCCC-T-CGCGGAC----TTTT--------A--TTAT-------TCTGAACC-AC---CTCGG-CGCCC-CT-AGCGGG-CGTTTCGAA--GCGTTGGGG-A--TCGGCCC------TTT--A---CC----GGCCGGCCCCGAAATACAGTGGCGGTCTCGCCGCAGCCTC-TCCTGCGCAGTAG-TTTGCACA-CTCGCACCGGGA-GCGCGGCGC--
		Hypocrea_lixii                             GTTGCCTCGGCGGG---A------TCT---C-TGCCCCGGGTGCGTCGCAGCCCCGGA--CCAAGGCGCCC-GCCGG-AGG--------ACCAACCT--AAAA-CTCTTATT-------GT-AT-A-------------CCCCCT-CGCGGG-----TTTTTTTTT---A--TAA--------TCTGAGCC----TTCTCGG-CGCC-TCT-CGTAGG-CGTTTCGAA--GCGTTGGGG-A--TCGGCCCT--CCCTT---A--GC-GGGTGGCCGTCTCCGAAATACAGTGGCGGTCTCGCCGCAGCCTC-TCCTGCGCAGTAG-TTTGCACA-CTCGCATCGGGA-GCGCGGCGCGT
		Hypocrea_lutea                             GTTGCCTCGGCGGG---A------T-TT--C-TGCCCCGGGCGCGTCGCAGCCCCGGA--CCAAGGCGCCC-GCCGG-AGG--------ACCAATTTACAAA--CTCTTT---------GT-AT-GT------------CCC--TCTGCGGA-----TTTTTATTAT--A-C-A-------TT-CTGAGC----TTTCTCGG-CGCTC-CT-AGCGAG-CGTTTCGAA--GCGTTGGGG-A--TCGGCC-------TTCT-A---CC----GGCCGGCCCCGAAATACAGTGGCGGTCTCGCCGCAGCCTC-TCCTGCGCAGTAG-TTTGCACA-CTCGCACCGGGA-GCGCGGCGCGT
		Hypocrea_megalosulphurea                   GTTGCCTCGGCGGG---A--------T---C--GCCCCGGGCGCGTCGCAGCCCCGGG--CCAAGGCGCCC-GCCGG-AGG--------ACC-G-----AAAA-CTCCT----------GT-AT--T------------------------------TTT--GTA----TTTTA------CCT-CTGAGC----CTTCTCGG-CGCTCCC--AGCGAG-CGTTCCGAA--GCGTTGGGG-A--TCGGCACCCCGCCCCTG-A-GGCGGG--CGCCGGCCCCGAAATACAGTGGCGGTCTCGCCGCAGCCTC-CCCTGCGCAGTAGCTTTGCACA-CTCGCACCGGGA-GCGCGGCGCGG
		Hypocrea_melanomagnum                      GTTGCCTCGGCGGG---A------T-TT--C-TGCCCCGGGCGCGTCGCAGCCCCGGA--CCAAGGCGCCC-GCCGG-AGG--------ACCAATTTACAAA--CTCTTT---------GT-AT-GT------------CCC--TCTGCGGA-----TTTTTATTAT--A-C-A-------TT-CTGAGC----TTTCTCGG-CGCTC-CT-AGCGAG-CGTTTCGAA--GCGTTGGGG-A--TCGGCC-------TTCT-A---CC----GGCCGGCCCCGAAATACAGTGGCGGTCTCGCCGCAGCCTC-TCCTGCGCAGTAG-TTTGCACA-CTCGCACCGGGA-GCGCGGCGCGT
		Hypocrea_minutispora                       GTTGCCTCGGCGGG---AAAA---T-TT--CATGCCCCGGGCGCGTCGCAGCCCCGGAA-CCA-GGCGCCC-GCCGG-AGG--------ACCAACC---AAAA-CTCTTTT--------GT-AT-GT------------CCCC-T-CGCGGAC----TTTT--------A-TTA-T-------TCTGAACC-A---TCTCGG-CGCCC-CT-AGCGGG-CGTTTCGAA--GCGTTGGGG-A--TCGGCCC------TTT--A---C-GG--GGCCGGCCCCGAAATACAGTGGCGGTCTCGCCGCAGCCTC-TCCTGCGCAGTAG-TTTGCACA-CTCGCACCGGGA-GCGCGGCGCGT
		Hypocrea_muroiana                          GTTGCCTCGGCGGGG-----------T---CACGCCCCGGGTGCGTCGCAGCCCCGGAA-CCA-GGCGCCC-GCCGG-AGGG-------ACCAACC---AAA--CTCTTT-------C-GT-A--GT------------CCCC-T-CGCGGACG---TT----------ATTT-CTTACAGCT-CTGAGCAAAAAAA---------------------------C-AA--GCGTTGGGG-A--TCGGGGA--CCCCTAAG-A---CGGGAT-CCCGGCCCCGAAATACAGTGGCGGTCTCGCCGCAGCCTC-TCCTGCGCAGTAG-TTTGCACAACTCGCACCGGGA-GCGCGGCGCGT
		Hypocrea_neorufa                           GTTGCCTCGGCGGGG-----------T---CACGCCCCGGGCGCGTCGCAGCCCCGGAA-CCA-GGCGCCC-GCCGG-AGGG-------ACCAACC---AAA--CTCTT--------CTGC-A--GT------------CCGC-T-CGCGGACG---T-----------ATTT-CTTACAGCT-CTGAGCAAAAA---------------------------CAC-AA--GCGTTGGGG-A--TCGGG-A--CCCCTCAC-A---CGGG-TG-CCGGCCCCGAAATGCAGTGGCGGTCTCGCCGCAGCCTC-CCCTGCGCAGTAG-TTTGCACAACTCGCACCGGGA-GCGCGGCGCGT
		Hypocrea_nigrovirens                       GTTGCCTCGGCGGG---A------TCT---C-TGCCCCGGGCGCGTCGCAGCCCCGGA-CCCA-GGCGCCC-GCCGG-AGGG-------ACCAACCAAAAAAA-CCCTTACC-------GT-ATCAG------------CCCCCT-CGCGGGCG---TTT--CC-----ACCCCCGA------TCTGAGCC----TTCTCGG-CGCCCCCT-CGCGGG-CGTTCCGAA--GCGTTGGGG-A--TCGGCCC--TCCCT--------CGCGGGGGCCGGCCCCGAAATGCAGTGGCGGTCTCGCCGCAGCCTC-TCCTGCGCAGTAG-TTTGCACA-CTCGCACCGGGA-GCGCGGCGCGG
		Hypocrea_novaezelandiae                    GTTGCCTCGGCGGG---A------TCT---C-TGCCCCGGGCGCGTCGCAGCCCCGGATCCCATGGCGCCC-GCCGG-AGG--------ACCAACC---AAAA-CTCCTTTT----TATCTCC--GTC--GCGGC----T-CCGT-CGCGGCTC-TGTTTT--------ATTTT------GCT-CTGAGCC---TTTCTCGG-CGACC-CT-AGCGGG-CGTCTCGAA--GCGTTGGGG-A--TCGGCCCC-----TCAC-----CG----GGCCGCCCCCGAAATCCAGTGGCGGTCTCGCCGCAGCCTC-TCCTGCGCAGTAG-TTTGCACA-CTCGCACCGGGA-GCGCGGCGCGG
		Hypocrea_orientalis                        GTTGCCTCGGCGGG---A-----TTCT---CTTGCCCCGGGCGCGTCGCAGCCCCGGATCCCATGGCGCCC-GCCGG-AGG--------ACCAACTCC-AAA--CTCTTTTT----TCTCTCC--GTC--GCGGC----TCCCGT-CGCGGCTC-TGTTTT--------ATTTTT-----GCT-CTGAGCC---TTTCTCGG-CGACC-CT-AGCGGG-CGTCTCGAA--GCGTTGGGG-A--TCGGCCCC-----TCAC-----CG----GGCCGCCCCCGAAATACAGTGGCGGTCTCGCCGCAGCCTC-TCATGCGCAGTAG-TTTGCACA-CTCGCACCGGGA-GCGCGGCGCGG
		Hypocrea_schweinitzii                      GTTGCCTCGGCGGG---A-----TTCT---C-TGCCCCGGGCGCGTCGCAGCCCCGGATCCCATGGCGCCC-GCCGG-AGG--------ACCAACTC--AAA--CTCTTTTT----TCTCTCC--GTC--GCGGC---CTA-CGT-CGCGGCTC-TGTTTT--------ATTTTT-----GCT-CTGAGCC---TTTCTCGG-CGACC-CT-AGCGGG-CGTCTCGAA--GCGTTGGGG-A--TCGGCCCC-----TCAC-----CG----GGCCGCCCCCGAAATACAGTGGCGGTCTCGCCGCAGCCTC-TCCTGCGCAGTAG-TTTGCACA-CTCGCACCGGGA-GCGCGGCGCGG
		Hypocrea_semiorbis                         GTTGCCTCGGCGGG---AA-----T-T---C-TGCCCCGGGCGCGTCGCAGCCCCGGA--CCAAGGCGCCC-GCCGG-AGG--------ACCAACC---AAAA-CTCTTTAT-------GT-AT-A-------------CCCCAT-CGCGGG-----TTTTTT------A--TA---------TCTGAGCC----TTCTCGG-CGCCC-CT-CGTGGG-CGTTTCGAA--GCGTTGGGG-A--TCGGCCC------TTA--A---CC----GGCCGGCCCCGAAATACAGTGGCGGCCTCGCCGCAGCCTC-TCATGCGCAGTAG-TTTGCACA-CTCGCACCGGGA-GCGCGGCGCGG
		Hypocrea_sinuosa                           GTTGCCTCGGCGGG---A------TCT---C-TGCCCCGGGCGCGTCGCAGCCCCGGA--CCAAGGCGCCC-GCCGG-AGG----AAAAAACAACC---AAAA-CTCTTTTT-------GT-AT-A-------------CCCCCT-CGCGGG-----TTTTTTTT----A-----------CTTCTGAG--AA-CTTCTCGG-CGCCCC-TTAGCGGG-CGTTTCGAA--GCGTTGGGG-A--TCGGCCA-CTCCCTCCT-CTTTGGGGGCGGCCGGCCCCGAAATACAGTGGCGGTCTCGCCGCAGCCTC-TCCTGCGCAGTAG-TTTGCACA-CTCGCACCGGGA-GCGCGGCGCGT
		Hypocrea_sp._WJ2305                        GTTGCCTCGGCGG----A------------C--GCCCCGGGCGCGTCGCAGCCCCGGA--CCAAGGCGCCC-GCCGG-AGG--------ACCAACC---GAAA-CTCTTTCTT------GTGA--GT------------CCCCCA--GCGGACG---------------AA-TATTTTTTCTT-CTGAGCAAAC---CTCGGGCGCCC-CTTAGCGGG-CGTTTCGAA--GCGTTGGGGGA--CCGGCCCCCCGCTATCC-AC-GC-GG-CGGCCGGCCCCGAAATGCAGTGGCGGTCTCGCCGCANCCTC-TCCTGCGCAGTAN-TTTGCACA-CTCGCACCGGGA-GCGCGGCGGGC
		Hypocrea_stellata                          GTTGCCTCGGCGGG---AAA----T-T---CATGCCCCGGGCGCGTCGCAGCCCCGGA--CCAAGGCGCCC-GCCGG-AGG--------ACCAACC---AAAA-CTCTTTT--------GT-AT-GT------------CCC--T-CGCGGAC----TTTT--------A--TAAT-------TCTGAACC-A---TCTCGG-CGCCC-CT-AGCGGG-CGTTTCGAA--GCGTTGGGG-A--TCGGCCC------TTT--A---CC----GGCCGGCCCCGAAATACAGTGGCGGTCTCGCCGCAGCCTC-TCCTGCGCAGTAG-TTTGCACA-CTCGCACCGGGA-GCGCGGCGC--
		Hypocrea_stilbohypoxyli                    GTTGCCTCGGCGGGG-----------T---CACGCCCCGGGTGCGTCGCAGCCCCGGAA-CCA-GGCGCCC-GCCGG-AGGG-------ACCAACC---AAA--CTCTTT------CCTGA-A--GT------------CCCC-T-CGCGGACG---TT----------ATTT-CTTACAGCT-CTGAGCAAGAA---------------------------TTC-AA--GCGTTGGGG-A--TCGGGGA--CCCCTAAG-A---CGGGAT-CCCGGCCCCGAAATACAGTGGCGGTCTCGCCGCAGCCTC-TCCTGCGCAGTAG-TTTGCACAACTCGCACCGGGA-GCGCGGCGCGC
		Hypocrea_straminea                         GTTGCCTCGGCGGG---A------TCTT--C-TGCCCCGGGTGCGTCGCAGCCCCGGA--CCAAGGCGCCC-GCCGG-AGG-------AATCAACC---AAAA-CTCTTATT-------GT-AT-A-------------CCCCCT-CGCGGG-----TTTTTT------A--TAA--------TCTGAGCC----TTCTCGG-CGCC-TCT-CGTAGG-CGTTTCGAA--GCGTTGGGG-A--TCGGCC----TCCTTT--A---C-GGG-GGCCGTCTCCGAAATACAGTGGCGGTCTCGCCGCAGCCTC-TCCTGCGCAGTAG-TTTGCACA-CTCGCATCGGGA-GCGCGGCGCGT
		Hypocrea_strictipilosa                     GTTGCCTCGGCGGG---A------TCT---C-TGCCCCGGGCGCGTCGCAGCCCCGGA--CCAAGGCGCCC-GCCGG-AGG--------ACCAACC---AAAAACCCTT----------GT-AT-G-------------CCCCCT-CGCGGG-----TTTTTTTTT---A----------CTGTCTGAGCC-A---TCTCGG-CGCCC-CT-CGCGGG-CGTTTCGAA--GCGTTGGGG-A--TCGGCCC------TTT--A---CC----GGCCGGCCCCGAAATACAGTGGCGGTCTCGCCGCAGCCTC-TCCTGCGCAGTAG-TTTGCACA-CTCGCACCGGGA-GCGCGGCGCAG
		Hypocrea_sulawesensis                      GTTGCCTCGGCGGG---A------CAT---C-TGCCCCGGGCGCGTCGCAGCCCCGGA--CCAAGGCGGCCCGCCGG-AGG-------AACCAACCCCCAAAAACCCCT----------GTCTCGTG------------CCCCCT-CGCGGGCTCTCTCT---------GA----------CCTCTGAGCC----TTCTCGG-CGCCC-GCCCGCGGG-CGTTCCGAA--GCGTTGGGG-A--TCGGCCACCC---T------CGCCGGGGGGCCGGCCCCGAAATGCAGTGGCGGCCTCGCCGCGGCCTCCCCATGCGCAGTAGCTTTGCACG-CTCGCACCGGGA-CCGCGGCGCGT
		Hypocrea_sulfurea                          GTTGCCTCGGCGGG-TTA-TT----CTCA-C-TGCCCCGGGCGCGTCGCAGCCCCGGA--CCAAGGCGCCC-GCCGG-AGG--------ACCAACTCTCAAA--CTCTTCTT-------GT-AACAT------------CCC-TT-CGCGGA-----TTTT--CT----AA-TA-----CTCT-CTGAGC----TTTCTCGG-CGCTCCC--AGCGAG-CGTTTCGAA--GCGTTGGGG-A--TCGGC-------TTAAC-A---C----TTGCCGGCCCCGAAATGCAGTGGCGGTCTCGCCGCAGCCTC-TCCTGCGCAGTAG-TTTGCACA-CTCGCAACGGGA-GCGCGGCGCGT
		Hypocrea_surrotunda                        GTTGCCTCGGCGGG---A------TCT---C-TGCCCCGGGCGCGTCGCAGCCCCGGA--CCAAGGCGCCC-GCCGG-AGGG-AAAAAAAACAACC---AAAA-CTCTTTTT-------GT-AT-A-------------CCCCCT-CGCGGG-----TTTTTTTT----A-----------CTTCTGAG--AA-CTTCTCGG-CGCCCC-TTAGCGGG-CGTTTCGAA--GCGTTGGGG-A--TCGGCCA-CTCCCTCCT-CTTTGGGGGCGGCCGGCCCCGAAATACAGTGGCGGTCTCGCCGCGGCCTC-TCCTGCGCAGTAG-TTTGCACA-CTCGCATCGGGA-GCGCGGCGCGT
		Hypocrea_tawa                              GTTGCCTCGGCGGG---A------TCT---C-TGCCCCGGGTGCGTCGCAGCCCCGGA--CCAAGGCGCCC-GCCGG-AGG--------ACCAACCC--AAAA-CTCTTATT-------GT-AT-A-------------CCCCCT-CGCGGG-----TTTTTTTTT---A--AAA--------TCTGAGCC----ATCTCGG-CGCC-TCT-CGTAGG-CGTTTCGAA--GCGTTGGGG-A--TCGGCCC--TCCCTC------GC-GGGGAGCCGTCTCCGAAATACAGTGGCGGTCTCGCCGCAGCCTC-TCCTGCGCAGTAG-TTTGCACA-CTCGCACCGGGA-GCGCGGCGCGT
		Hypocrea_thailandica                       GTTGCCTCGGCGGG---A------TCT---C-TGCCCCGGGTGCGTCGCAGCCCCGGA--CCAAGGCGCCC-GCCGG-AGG--------ACCAACC---AAAA-CTCCTAGT-------GT-AT-A-------------CCCCCT-CGCGGG-----TTTTTTTTT---AC-AA---------TCTGAGCC----TTCTCGG-CGCCC-CT-CGTGGG-CGTTCCGAA--GCGTTGGGG-A--TCGGCCC--TCCCTCT-----GC-GGGGGGCCGTCTCCGAAATGCAGTGGCGGTCCCGCCGCAGCCTC-TCCTGCGCAGTAG-TTTGCACA-CTCGCACCGGGA-GCGCGGCGCGT
		Hypocrea_thelephoricola                    GTTGCCTCGGCGGG---A------TCT---C-TGCCCCGGGCGCGTCGCAGCCCCGGA--CCAAGGCGCCC-GCCGG-AGG--AGGAAAAA-AACC---AAAAACT-CCCTTT------GT-AT-A-------------CCCCCT-CGCGGG-----TTTTCT------A-----------CCTCTGAG--AA-CTTCTCGG-CGCCCCCT-AGCGGG-CGTTCCGAA--GCGTTGGGG-A--TCGGCCC--TCCCT-----CCGCGGGGCGGCCGGCCCCGAAATGCAGTGGCGGTCTCGCCGCAGCCTC-CCCTGCGCAGTAG-TTTGCACA-CTCGCACCGGGA-GCGCGGCGCGC
		Hypocrea_virens                            GTTGCCTCGGCGGG---A------TCT---C-TGCCCCGGGTGCGTCGCAGCCCCGGA--CCAAGGCGCCC-GCCGG-AGG--------ACCAACC---AAAA-CTCTTATT-------GT-AT-A-------------CCCCCT-CGCGGG-----TTTTTT------A-CTA---------TCTGAGCC-A---TCTCGG-CGCCC-CT-CGTGGG-CGTTTCGAA--GCGTTGGGG-A--TCGGCCC------TTT--A---C-GG--GGCCGGCCCCGAAATACAGTGGCGGTCTCGCCGCAGCCTC-TCCTGCGCAGTAG-TTTGCACA-CTCGCATCGGGA-GCGCGGCGCGT
		Hypocrea_virescentiflava                   GTTGCCTCGGCGGG---A------TCT---C-TGCCCCGGGCGCGTCGCAGCCCCGGA--CCAAGGCGCCC-GCCGG-AGG------AAAACAACC---AAAA-CTCTTTT--------GT-AT-A-------------CCCCCT-CGCGGG-----TTTTTT------A-----------CTTCTGAG---A-CTTCTCGG-CGCCCC-TTAGTGGG-CGTTTCGAA--GCGTTGGGG-A--TCGGCCC--TCCCT------CGCGGGG--GCCGGCCCCGAAATACAGTGGCGGTCTCGCCGCAGCCTC-TCCTGCGCAGTAG-TTTGCACA-CTCGCACCGGGA-GCGCGGCGCGT
		Trichoderma_aggressivum                    GTTGCCTCGGCGGG---A------TCT---C-TGCCCCGGGTGCGTCGCAGCCCCGGA--CCAAGGCGCCC-GCCGG-AGG--------ACCAACCC--AAAA-CTCTTATT-------GT-AT-A-------------CCCCCT-CGCGGG-----TTATTTTT----A-CTA---------TCTGAGCC----TTCTCGG-CGCC-TCT-CGTAGG-CGTTTCGAA--GCGTTGGGGGA--TCGGCCC--TCCCTC------GC-GGG-GGCCGTCTCCGAAATGCAGTGGCGGTCTCGCCGCAGCCTC-TCCTGCGCAGTAG-TTTGCACA-CTCGCACCGGGA-GCGCGGCGCGT
		Trichoderma_asperellum                     GTTGCCTCGGCGGGG-----------T---CACGCCCCGGGTGCGTCGCAGCCCCGGAA-CCA-GGCGCCC-GCCGG-AGG-------AACCAACC---AAA--CTCTTT-------CTGT-A--GT------------CCCC-T-CGCGGACG---T-----------ATTT-CTTACAGCT-CTGAGCAAAAA---------------------------TTC-AA--GCGTTGGGG-A--TCGGG-A--CCCCTCAC-A---CGGG-TG-CCGGCCCCGAAATACAGTGGCGGTCTCGCCGCAGCCTC-TCCTGCGCAGTAG-TTTGCACAACTCGCACCGGGA-GCGCGGCGCGT
		Trichoderma_brevicompactum                 GTTGCCTCGGCGGG---A------T-TT--C-TGCCCCGGGCGCGTCGCAGCCCCGGA--CCAAGGCGCCC-GCCGG-AGG--------ACCAATTTACAAA--CTCTTTT--------GT-AT-AT------------CCC-AT-CGCGGA-----TTCTTT------A-C-A-------TT-CTGAGC----TTTCTCGG-CGCTC-CT-AGCGAG-CGTTTCGAA--GCGTTGGGG-A--TCGGC-AC-----TTA------CC---T-GCCGGCTCCGAAATACAGTGGCGGTCTCGCCGCAGCCTC-TCCTGCGCAGTAG-TTTGCACA-CTCGCACCGGGA-GCGCGGCGCGT
		Trichoderma_cerinum                        GTTGCCTCGGCGGG---AA------CT---CATGCCCCGGGTGCGTCGCAGCCCCGGA--CCAAGGCGCCC-GCCGG-AGG--------ACCAACC---AAAA-CTCTTTTT-------GT-AT-A-------------CCCCCT-CGCGGG-----TTTTTT------A--TAA--------TCTGAGCC----TTCTCGG-CGCC-TCT-CGTAGG-CGTTTCGAA--GCGTTGGGG-A--TCGGCC-T--TCCTT-C-A---C-GGG-GGCCGTCTCCGAAATACAGTGGCGGTCTCGCCGCAGCCTC-TCCTGCGCAGTAG-TTTGCACA-CTCGCATCGGGA-GCGCGGCGCGT
		Trichoderma_effusum                        GTTGCCTCGGCGGG---A------TCT---C-TGCCCCGGGCGCGTCGCAGCCCCGGATCCCATGGCGCCC-GCCGG-AGG--------ACCAACC---AAA--CTCTTTTT----TCTCTCC--GTC--GCGGC----CCTCGT-CGCGGCTC-TGTTTT--------ACTTTT-----GCT-CTGAGCC---TTTCTCGG-CGACC-CT-AGCGGG-CGTCTCGAA--GCGTTGGGG-A--TCGGCCCC-----TCAC-----CG----GGCCGCCCCCGAAATCCAGTGGCGGTCTCGCCGCAGCCTC-TCCTGCGCAGTAG-TTTGCACA-CTCGCACCGGGA-GCGCGGCGCGG
		Trichoderma_erinaceum                      GTTGCCTCGGCGGGG-----------T---CACGCCCCGGGTGCGTCGCAGCCCCGGAA-CCA-GGCGCCC-GCCGG-AGGG-------ACCAACC---AAA--CTCTTTA------CTGT-A--GT------------CCCC-T-CGCGGACG---TT----------ATTT-CTTACAGCT-CTGAGCAAAAAA--------------------------TTC-AA--GCGTTGGGG-A--TCGGG-AA-CCCCTCAG-A---CGGGAT-CCCGGCCCCGAAATACAGTGGCGGTCTCGCCGCAGCCTC-TCCTGCGCAGTAG-TTTGCACAACTCGCACCGGGA-GCGCGGCGCGT
		Trichoderma_fertile                        GTTGCCTCGGCGGG---A------T-TT--C-TGCCCCGGGCGCGTCGCAGCCCCGGA--CCAAGGCGCCC-GCCGG-AGG--------ACCAACCC--AAAA-CTCTTTT--------GT-AT-A-------------CCCCCT-CGCGGG-----TTTTTT------A--TA---------TCTGAGCC----TTCTCGG-CGCC--CT-AGTGGG-CGTTTCGAA--GCGTTGGGG-A--TCGGCCC------TTA--A---CC----GGCCGGCCCCGAAATACAGTGGCGGCCTCGCCGCAGCCTC-TCATGCGCAGTAG-TTTGCACA-CTCGCACCGGGA-GCGCGGCGCGG
		Trichoderma_ghanense                       GTTGCCTCGGCGGG---A------TCT---C-TGCCCCGGGCGCGTCGCAGCCCCGGATCCCATGGCGCCC-GCCGG-AGG--------ACCAACC---AAA--CTCTTTTT----TCTCTCC--GTC--GCGGC----TTCCGT-CGCGGCTC-TGTTTT--------AACTTT-----GCT-CTGAGCC---TTTCTCGG-CGACC-CT-AGCGGG-CGTCTCGAA--GCGTTGGGG-A--TCGGCAC-G-CCCTCAC-A---CGGG-T-GCCGGCCCCGAAATCCAGTGGCGGTCTCGCCGCAGCCTC-TCCTGCGCAGTAG-TTTGCACA-CTCGCACCGGGA-GCGCGGCGCGG
		Trichoderma_hamatum                        GTTGCCTCGGCGGGG-----------T---CACGCCCCGGGTGCGTAAAAGCCCCGGAA-CCA-GGCGCCC-GCCGG-AGG-------AACCAACC---AAA--CTCTTT-------CTGT-A--GT------------CCCC-T-CGCGGACG---T-----------ATTT-CTTACAGCT-CTGAGCAAAAA---------------------------TTC-AA--GCGTTGGGG-A--TCGGG-A--CCCCTCAC-----CGGG-TG-CCGGCCCTGAAATACAGTGGCGGTCTCGCCGCAGCCTC-TCCTGCGCAGTAG-TTTGCACAACTCGCACCGGGA-GCGCGGCGCGT
		Trichoderma_helicum                        GTTGCCTCGGCGGG---A------TCTT--C-TGCCCCGGGTGCGTCGCAGCCCCGGA--CCAAGGCGCCC-GCCGG-AGG-------AACCAACC---AAAAACTCTTTTT-------GC-AT-A-------------CCCCCT-CGCGGG-----TTTTTT------A--ATTA-------TCTGAGCC---TTTCTCGG-CGCCC-CTTCGTGGG-CGTTTCGAA--GCGTTGGGGGA--TCGGCCACCC---T-CC-AAA-CCGGGCGGCCGTCTCCGAAATACAGTGGCGGTCTCGCCGCATCTCTCTCCTGCGCAGTAG-TTTGCACA-CTCGCAACGGGA-GCGCGGCGCGT
		Trichoderma_konilangbra                    GTTGCCTCGGCGGG---A------TCT---CTTGCCCCGGGCGCGTCGCAGCCCCGGACCCCATGGCGCCC-GCCGG-AGG--------ACCAACC---AAA--CTCTTTTT----TCTCTCC--GTC--GCGGC----TCCCGT-CGCGGCTC-TGTTTT--------ATTTT------GCT-CTGAGCC---TTTCTCGG-CGACC-CT-AGCGGG-CGTCTCGAA--GCGTTGGGG-A--TCGGCCCC-----TCAC-----CG----GGCCGCCCCCGAAATCCAGTGGCGGTCTCGCCGCAGCCTC-TCCTGCGCAGTAG-TTTGCACA-CTCGCACCGGGA-GCGCGGCGCGG
		Trichoderma_koningii                       GTTGCCTCGGCGGGG-----------T---CACGCCCCGGGTGCGTCGCAGCCCCGGAA-CCA-GGCGCCC-GCCGG-AGGG-------ACCAACC---AAA--CTCTTT-------CTGT-A--GT------------CCCC-T-CGCGGACG---TT----------ATTT-CTTACAGCT-CTGAGCAAAAA---------------------------TTC-AA--GCGTTGGGG-A--TCGGG-AA-CCCCTAAG-A---CGGGAT-CCCGGCCCCGAAATACAGTGGCGGTCTCGCCGCAGCCTC-TCATGCGCAGTAG-TTTGCACAACTCGCACCGGGA-GCGCGGCGCGT
		Trichoderma_longibrachiatum                GTTGCCTCGGCGGG---A-----TTCT---CTTGCCCCGGGCGCGTCGCAGCCCCGGATCCCATGGCGCCC-GCCGG-AGG--------ACCAACTCC-AAA--CTCTTTTT----TCTCTCC--GTC--GCGGC----TCCCGT-CGCGGCTC-TGTTTT--------ATTTTT-----GCT-CTGAGCC---TTTCTCGG-CGACC-CT-AGCGGG-CGTCTCGAA--GCGTTGGGG-A--TCGGCCCC-----TCAC-----CG----GGCCGCCCCCGAAATACAGTGGCGGTCTCGCCGCAGCCTC-TCCTGCGCAGTAG-TTTGCACA-CTCGCACCGGGA-GCGCGGCGCGG
		Trichoderma_longipile                      GTTGCCTCGGCGGG---A------TCT---C-TGCCCCGGGTGCGTCGCAGCCC-GGA--CCAAGGCGCCC-GCCGG-AGG--------ACCAACC---AAAA-CTCTTTAT-------GT-AT-A-------------CCCCCT-CGCGGG-----TTTTTT------A-C-AA--------TCTGAGCC-A---TCTCGG-CGCCC-CT-CGTGGG-CGTTTCGAA--GCGTTGGGG-A--TCGGCCC------TTT--A---C-GG--GGCCGGCCCCGAAATACAGTGGCGGTCTCGCCGCAGCCTC-TCCTGCGCAGTAG-TTTGCACA-CTCGCATCGGGA-GCGCGGCGCGT
	;
END;

BEGIN CODONS;
CODONPOSSET * CodonPositions = 
 N: 1 - 359 ; 
 CODESET * UNTITLED = Universal: all ; 
 END;

BEGIN ASSUMPTIONS;
OPTIONS DEFTYPE = unord PolyTcount = MINSTEPS ; 
 END;