#NEXUS [written Mon Aug 19 10:10:52 CST 2013 by Mesquite version 2.75 (build 564) at yunxia-PC/210.29.141.243] BEGIN TAXA; TITLE AQP1; DIMENSIONS NTAX=26; TAXLABELS Bos_taurus Canis_familiaris Cavia_porcellus Echinops_telfairi Equus_caballus Felis_catus Gorilla_gorilla Homo_sapiens Macaca_mulatta Macropus_eugenii Microcebus_murinus Mus_musculus Ochotona_princeps Otolemur_garnettii Pan_troglodytes Pteropus_vampyrus Rattus_norvegicus Tupaia_belangeri Tursiops_truncatus Sousa_chinensis Grampus_griseus Balaenoptera_omurai Balaenoptera_acutorostrata Mesoplodon_densirostris Kogia_simus Delphinapterus_leucas ; END; BEGIN CHARACTERS; TITLE 'Matrix in file "AQP1.nexus"'; DIMENSIONS NCHAR=636; FORMAT DATATYPE = DNA GAP = - MISSING = ?; MATRIX Bos_taurus ATGGCCAGCGAGTTCAAGAAGAAGCTCTTTTGGAGGGCGGTGGTGGCCGAGTTCCTGGCCATGATCCTCTTCATCTTCATCAGCATCGGTTCAGCCCTGGGCTTCCACTACCCAATAAAGAGCAACCAGACGACAGGTGCAGTCCAGGATAACGTGAAGGTGTCACTGGCCTTTGGGTTGAGCATCGCCACGCTGGCCCAGAGCGTGGGCCACATCAGCGGTGCCCACCTCAACCCAGCCGTCACACTGGGGCTCCTGCTCAGCTGCCAGATCAGTGTCCTCCGGGCCATCATGTACATCATTGCCCAGTGCGTGGGGGCCATCGTTGCCACTGCCATCCTCTCGGGCATCACCTCCTCTCTGCCCGACAACTCGCTTGGCCTCAATGCGCTGGCCCCTGGCGTGAACTCGGGCCAGGGCCTGGGCATCGAGATCATCGGGACTCTGCAGCTGGTGCTGTGCGTGCTGGCCACCACCGACCGGAGGCGCCGTGACCTCGGGGGCTCTGGGCCCCTGGCCATTGGCTTCTCTGTGGCCCTGGGACATCTGCTGGCGATAGACTACACCGGCTGCGGTATTAACCCTGCCCGGTCCTTCGGCTCCTCGGTGATTACGCACAATTTCCAGGACCACTGG Canis_familiaris ATGGCCAGCGAGTTCAAGAAGAAGCTCTTCTGGAGGGCGGTGGTGGCCGAGTTCCTGGCCATGATCCTCTTCGTCTTCATCAGCATCGGTTCTGCCCTGGGCTTCAACTACCC---------------------------------GGATAACGTGAAGGTGTCACTGGCCTTCGGGCTGAGCATTGCCACCCTGGCCCAGAGCGTGGGCCACATTAGTGGCGCCCACCTCAACCCAGCTGTCACGCTGGGGCTGCTGCTCAGTTGCCAGATCAGCATCCTCAGGGCTGTCATGTACATCATCGCCCAGTGCGTGGGGGCCATCGTGGCCACCGCCATCCTCTCGGGCATCACCTCCTCCCTTCCGGACAACTCCCTCGGCCGAAACGAGCTGGCCCCTGGTGTGAACTCCGGTCAGGGCTTGGGCATCGAGATCATTGGCACCCTGCAGCTGGTGCTGTGCGTGCTGGCCACCACGGACAGGAGGCGGCGTGACCTCGGGGGCTCGGGCCCCCTGGCCATCGGCCTCTCTGTGGCCTTGGGACACCTGCTGGCGATCGACTACACAGGCTGCGGTATCAACCCCGCCCGGTCCTTCGGCTCCTCGGTGATCACACATAACTTCAAGGACCACTGG Cavia_porcellus ATGGCCAGCGAGTTCAAGAAGAAGATCTTCTGGAGGGCCGTGGTGGCCGAGTTCTTGGCTATGACCCTCTTCGTCTTCATCAGTATTGGCACTGCCCTGGGCTTCAAATACCCGGTGAAGGGAAACCAGACGGCGAATGCGGTGCAGGACAACGTGAAGGTGTCACTGGCCTTTGGGCTGAGCATTGCTACAATGGCCCAGAGTGTGGGCCACATCAGTGGCGCGCACCTCAACCCGGCTGTCACGCTGGGGCTGCTGCTCAGCTGTCAGATCAGCATCCTTCGGGCAGTCATGTACATCATCGCCCAGTGCGTGGGGGCCATCGTTGCCACTGCCATCCTCTCGGGCATCACCTCCAACCTGCCCATGAACACGCTTGGCCGAAATGACCTGGCTTCTGGCGTGAACTCAGGCCAGGGCCTGGGCATTGAGATCATTGGCACCCTGCAGCTGGTGCTGTGTGTACTGGCCACTACTGATCGGAGACGGCGTGACCTCGGTGGCTCAGCTCCCCTAGCCATTGGCTTCTCTGTGGCCCTGGGACACCTGCTGGCGATCGACTACACTGGCTGTGGTATTAACCCTGCTCGGTCCTTTGGCTCCGCGGTGCTCACCCGTGACTTCACCAACCACTGG Echinops_telfairi ATGGCCAGCGAGTTCAAGAAGAAGCTCTTCTGGAGGGCAGTGGTGGCCGAGTTCCTGGCCATGACCCTCTTCATCTTCATCAGCATCGGGTCCGCCCTGGGCGTCAACTACCAGGTGGTGGGCAACCACACC------CCCACCCAGGACATCGTGAAGGTGTCGCTGGCCTTCGGGCTGAGCATCGCCACGCTGGCCCAGAGTGTGGGCCACATCAGCGGGGCCCACCTCAACCCGGCCGTCACACTGGGCCTGCTGCTCAGCTGCCAGATCAGCATCCTCCGGGCTGTCATGTACATCATCGCTCAGTGCGTGGGCGCCATCGTCGCCACCGCCATCCTCTCGGGCATCACCTCCTCGCTGAACCCCAACTCTCTTGGCCTCAATACGCTGGCGAGTGGAGTGAACCCAGGCCAAGGCCTGGGCATCGAGATCATTGGCACGCTGCAGCTGGTGCTGTGTGTGCTGGCCACCACTGACCGCCGTCGCCGCGACCTTGGAGGCTCCGGGCCCCTGGCCATCGGCCTCTCGGTGGCACTAGGGCACCTGCTGGCGATTGACTACACCGGCTGTGGAATCAACCCCGCTCGCTCCTTCGGCTCTGCGGTGATCACCAACAACTTCATTGATCACTGG Equus_caballus ATGGCCAGCGAGTTCAAGACGAAGCTCTTTTGGAGGGCAGTGGTGGCTGAGTTCCTGGCTATGATCCTCTTCGTCTTCATCAGCATTGGTTCCGCCCTGGGCTTCCAATACCCGGTGAAGAGCAACCAGACAGCAGGTGCGGCCCAGGACAACGTGAAGGTGTCGCTGGCCTTTGGGCTGAGCATCGCCACACTGGCCCAGAGCGTGGGCCACATCAGTGGCGCCCACCTCAACCCGGCCGTCACACTGGGGCTGCTGCTCAGCTGCCAGATCAGCATCCTCCGGGCCCTCATGTACATCATTGCCCAGTGTGTGGGTGCCATCGTCGCCACTGCCATCCTCTCAGGCATCACCTCCTCCCTGCCCGACAACTCACTCGGCCGCAACGAGCTGGCCTCTGGCGTGAACTCGGGCCAAGGCCTGGGCATCGAGATCATCGGCACCCTGCAGCTGGTGCTGTGTGTGCTGGCCACCACTGACCGGAGACGCCGTGACCTCGGGGGCTCAGCCCCTCTTGCTATCGGCTTCTCTGTGGCCCTGGGACACCTGCTGGCGATCGACTACACCGGCTGCGGTATTAACCCTGCCCGGTCCTTTGGCTCCTCGGTGATCACCCACAACTTCAAGGATCACTGG Felis_catus ATGGCCAGCGAGTTCAAGAAGAAGCTCTTCTGGAGGGCCGTGGTGGCCGAGTTCCTGGCCATGACCCTCTTCGTCTTCATCAGCATCGGTTCCGCCCTGGGCTTCCATTACCCGGTGAAGAACAACCAGACAGCAGGTGCCTCCCAGGACAACGTGAAGGTGTCACTGGCCTTCGGGCTGAGCATCGCCACCCTGGCCCAGAGCGTGGGCCACATCAGTGGCGCCCACCTCAACCCGGCCGTCACGCTGGGGCTGTTGCTCAGCTGCCAGATCAGCATCCTCAGGGCTATCATGTACATCATCGCCCAGTGCGTGGGGGCCATCGTGGCCACTGCCATCCTCTCGGGCGTCACCTCCTCCCTGCCGGACAACTCGCTCGGCCGAAACGAGCTGGCCCCCGGTGTGAACTCTGGCCAGGGCCTGGGCATCGAAATCATCGGCACCCTGCAGCTGGTGCTTTGTGTGCTGGCCACCACTGACAGGAGGCGCCGTGATCTCGGGGGCTCGGGCCCCCTCGCCATCGGCCTCTCTGTGGCCCTGGGACATCTGCTCGCGATCGACTACACAGGCTGCGGCATTAACCCCGCCCGGTCCTTTGGCTCGTCAGTGATTACTCATAACTTCAAGGACCACTGG Gorilla_gorilla ATGGCCAGCGAGTTCAAGAAGAAGCTCTTCTGGAGGGCAGTGGTGGCCGAGTTCCTGGCCACGACCCTCTTTGTCTTCATCAGCATCGGTTCTGCCCTGGGCTTCAAATACCCGGTGGGGAACAACCAGACG------GCGGTCCAGGACAACGTGAAGGTGTCGCTGGCCTTCGGGCTGAGCATCGCCACGCTGGCGCAGAGTGTGGGCCACATCAGCGGCGCCCACCTCAACCCGGCTGTCACACTGGGGCTGCTGCTCAGCTGTCAGATCAGCATCTTCCGTGCCCTCATGTACATCATCGCCCAGTGTGTGGGGGCCATCGTCGCCACCGCCATCCTCTCAGGCATCACCTCCTCCCTGACTGGGAACTCGCTTGGCCGCAATGACCTGGCTGATGGTGTGAACTCGGGCCAGGGCCTGGGCATCGAGATCATCGGGACCCTCCAGCTGGTGCTGTGCGTGCTGGCTACTACCGACCGGAGGCGCCGCGACCTTGGTGGCTCAGCCCCCCTTGCCATCGGCCTCTCTGTAGCCCTTGGACACCTCCTGGCT????????????????????????????????????????????????????????????????????????????????? Homo_sapiens ATGGCCAGCGAGTTCAAGAAGAAGCTCTTCTGGAGGGCAGTGGTGGCCGAGTTCCTGGCCACGACCCTCTTTGTCTTCATCAGCATCGGTTCTGCCCTGGGCTTCAAATACCCGGTGGGGAACAACCAGACG------GCGGTCCAGGACAACGTGAAGGTGTCGCTGGCCTTCGGGCTGAGCATCGCCACGCTGGCGCAGAGTGTGGGCCACATCAGCGGCGCCCACCTCAACCCGGCTGTCACACTGGGGCTGCTGCTCAGCTGCCAGATCAGCATCTTCCGTGCCCTCATGTACATCATCGCCCAGTGCGTGGGGGCCATCGTCGCCACCGCCATCCTCTCAGGCATCACCTCCTCCCTGACTGGGAACTCGCTTGGCCGCAATGACCTGGCTGATGGTGTGAACTCGGGCCAGGGCCTGGGCATCGAGATCATCGGGACCCTCCAGCTGGTGCTATGCGTGCTGGCTACTACCGACCGGAGGCGCCGTGACCTTGGTGGCTCAGCCCCCCTTGCCATCGGCCTCTCTGTAGCCCTTGGACACCTCCTGGCTATTGACTACACTGGCTGTGGGATTAACCCTGCTCGGTCCTTTGGCTCCGCGGTGATCACACACAACTTCAGCAACCACTGG Macaca_mulatta ATGGCCAGCGAGTTCAAGAAGAAGCTCTTCTGGAGGGCAGTGGTGGCCGAGTTCCTGGCCACGACCCTCTTTGTCTTCATCAGCATTGGCTCTGCCCTGGGCTTCAAATACCCGGTGGGGAACAACCAGACG------GTGGTCCAGGACAATGTGAAGGTGTCGCTGGCCTTCGGACTGAGCATCGCCACGCTGGCACAGAGCGTGGGTCACATCAGTGGCGCCCACCTCAACCCGGCTGTCACGGTGGGGCTGCTGCTCAGCTGCCAGATCAGCATCTTCCGTGCCCTCATGTACATCATCGCCCAGTGCGTGGGGGCCATCGTCGCCGCCGCCATCCTCTCGGGCATCACCTCCTCCCTGCCTGGGAACTCGCTCGGCCGCAATGATCTGGCTGATGGCGTGAACTCAGGCCAGGGCCTGGGCATCGAGATCATCGGGACCCTCCAGCTGGTGCTGTGTGTGCTGGCCACTACTGACCGAAGGCGCCGCGACCTTGGTGGCTCAGCCCCCCTTGCCATTGGCCTCTCTGTAGCCCTTGGACACCTCCTGGCTATTGACTACACCGGCTGTGGGATTAACCCTGCTCGGTCCTTCGGCTCCGCGGTGATCACACACAACTTCAGCAACCACTGG Macropus_eugenii ATGGCCAGCGAGTTCAAAAAGAAGATCTTTTGGAGGGCAGTGGTGGCTGAGTTCCTGGCCATGATCCTCTTTGTGTTCATCAGCATTGGCTCAGCCCTGGGCTACAATTACCCAGTGGAGGGCAACAAGACCTCCGGTGCCACCCAGGACAACGTGAAAGTCTCACTGGCCTTCGGCCTCAGCATCGCCACGCTGGCGCAGAGCGTGGGCCACATCAGCGGTGCCCACCTCAACCCTGCCGTCACCCTGGGGCTCCTGCTCAGCTGTCAGATCAGCATCCTCCGGGCCATCGTGTACATCATTGCCCAGTGTGTGGGGGCCATTGTAGCCGCGGCCATCCTCTCCGGCATCACGTCAAACCTCCCTGGCAACAGCCTCGGGCTCAATGGGCTCGCCAAAGGAGTCAATTCAGGCCAGGGACTGGGCATCGAGATCATTGGCACCCTGCAGCTGGTGTTGTGTGTACTGGCCACCACAGACCGCAGGCGCCATGACATCACAGGCTCCGCTCCGTTGGCTATTGGCTTCTCTGTTGCCCTGGGCCACCTCCTCGCGATTGATTACACTGGTTGCGGCATCAACCCTGCGCGCTCCTTCGGCCCAGCGGTTATAACCAACAACTTCGAGCACCATTGG Microcebus_murinus ATGGCCAGCGAGTTCAAGAAGAAGCTCTTCTGGAGGGCGGTGGTGGCCGAGTTCCTGGCCATGACCCTCTTCATCTTCATCAGCATCGGCTCTGCCCTGGGCTTCAACTACCCGGTGGGGAGCAACCAGACG------GCGGTCCAGGACAACGTGAAGGTGTCGCTGGCCTTCGGGCTGAGCATCGCCACGCTGGCCCAGAGCGTGGGCCACATCAGCGGCGCCCACCTCAACCCGGCCGTCACACTGGGGCTGCTGCTCAGCTGCCAGATCAGCATCCTGCGGGCCGTCATGTACATCGTGGCCCAGTGCGTGGGGGCCATCGTCGCCACCGCCATCCTCTCGGGCATCACCTCCTCCTTGTCCGTGAACTCACTCGGCCGCAACGAGCTGGCGAAAGGCGTGAACTCAGGCCAGGGCCTGGGCGTCGAGATCATCGCCACCCTGCAGCTGGTGCTGTGCGTGCTGGCCACCACCGACCGCAGGCGCCGCGACCTCGGGGGCTCGGCCCCGCTCGCCATTGGCCTCTCTGTCGCCCTGGGACACCTGCTGGCGATTGACTACACCGGCTGCGGCATCAACCCCGCGCGGTCCTTCGGCTCTGCGGTGATCACCCACAATTTCATCAACCACTGG Mus_musculus ATGGCCAGTGAAATCAAGAAGAAGCTCTTCTGGAGGGCTGTGGTGGCTGAGTTCCTGGCCATGACCCTCTTCGTCTTCATCAGCATTGGTTCTGCCCTAGGCTTCAATTACCCACTGGAGAGAAACCAGACG------CTGGTCCAGGACAACGTGAAGGTGTCGCTGGCCTTTGGTTTGAGCATCGCTACTCTGGCCCAAAGTGTGGGTCACATCAGCGGTGCTCACCTCAACCCTGCGGTCACACTGGGGCTCCTGCTCAGCTGTCAGATCAGCATCCTCCGGGCTGTCATGTACATCATCGCCCAGTGTGTGGGAGCCATCGTCGCCACGGCCATTCTCTCGGGCATCACCTCCTCCCTAGTCGACAATTCACTTGGCCGCAATGACCTGGCTCACGGTGTGAACTCTGGCCAGGGCCTGGGCATTGAGATCATTGGCACTCTGCAGCTGGTACTGTGCGTTCTGGCCACCACTGACCGGAGGCGCCGAGACTTAGGTGGCTCAGCCCCGCTTGCCATTGGCTTGTCTGTGGCCCTTGGACACCTGCTGGCGATTGACTACACTGGCTGCGGTATCAACCCTGCCCGGTCATTTGGCTCTGCTGTGCTCACCCGCAACTTCTCAAACCACTGG Ochotona_princeps ATGGCCAGCGAGTTTAAGAAGAAGATCTTCTGGAGGGCGGTGGTGGCTGAGTTCCTGGCCATGATCCTCTTCATCTTCATCAGCATCGGCACTGCCTTGGGCTTCCAGTACCCAGTGGGCAGCAACCAGACG------GCTGTGCAGGACAACGTGAAGGTTTCACTGGCCTTCGGCCTGAGCATCGCCACGCTGGCCCAGAGCGTGGGCCACATCAGCGGCGCCCACCTCAACCCAGCTGTCACGCTCGGGTTGCTGCTCAGCTGCCAGATTAGCATCCTTCGGGCCGTGCTGTACATCGTGGCCCAGTGTGTGGGCGCCATCGTCGCCACTGCCATCCTCTCTGGCATCACCTCCTCCCTGCCTGATAACTCGCTGGGCCGCAACGAT???????????????????????CCAGGGCCTGGGCATCGAGATCATTGGCACCCTGCAGTTGGTGCTGTGCGTACTGGCTACCACTGACCGCCGGCGCCGCGACCTGGGCGGCTCAGCACCCCTCGCCATTGGCTTCTCTGTGGCCCTGGGACACCTGCTGGCAATTGACTACACAGGCTGCAGCATTAACCCGGCTCGGTCCTTCGGCTCCGCGGTGCTCACCCACAACTTCAATAACCACTGG Otolemur_garnettii ATGGCCAGCGAGTTCAAAAAGAAGCTCTTCTGGAGGGGAGTGGTGGGTGAGTTCCTGGCCATGACCCTCTTCGTCTTCATCAGCATTGGCTCTGCCCTGGGCTTCAACTACCCGGTGGGGAGCAACCAGACG------GCGGTGCAGGACAATGTGAAGGTGTCACTGGCCTTCGGGCTGAGCATTGCCACACTAGCCCAGAGTGTGGGCCACATCAGTGGTGCCCACCTCAACCCGGCCGTAACACTGGGGCTGCTGCTCAGCTGCCAGATCAGCATTCTCCGGGCTGTCATGTACATCATCGCCCAGTGTGTGGGGGCCATTGTCGCCACCGCCATCCTCTCAGGCATCACTTCCTCCCTGCCCATGAACTCGCTCGGCCGCAATGACCTGGCCAATGGTGTGAACGCAGGCCAAGGCCTGGGCATCGAGATCATCGGCACCCTGCAGCTAGTACTGTGTGTGCTGGCCACCACGGACCGGAGGCGCCGTGACCTTGGTGGCTCAGCCCCCCTTGCCATTGGCCTTTCTGTAGCCCTGGGACATCTGCTGGCGATTGACTACACCGGCTGTGGTATTAACCCTGCTCGGTCCTTTGGCTCTGCGGTGATCACCCACAATTTTAGCAACCACTGG Pan_troglodytes ATGGCCAGCGAGTTCAAGAAGAAGCTCTTCTGGAGGGCAGTGGTGGCCGAGTTCCTGGCCACGACCCTCTTTGTCTTCATCAGCATCGGTTCTGCCCTGGGCTTCAAATACCCGGTGGGGAACAACCAGACG------GCGGTCCAGGACAACGTGAAGGTGTCGCTGGCCTTCGGGCTGAGCATCGCCACGCTGGCGCAGAGTGTGGGCCACATCAGCGGCGCCCACCTCAACCCGGCTGTCACACTGGGGCTGCTGCTCAGCTGCCAGATCAGCATCTTCCGTGCCCTCATGTACATCATCGCCCAGTGCGTGGGGGCCATCGTCGCCACCGCCATCCTCTCAGGCATCACCTCCTCCCTGAATGGGAACTCGCTTGGCCGCAATGACCTGGCTGATGGTGTGAACTCGGGCCAGGGCCTGGGCATCGAGATCATCGGGACCCTCCAGCTGGTGCTATGCGTGCTGGCTACTACCGACCGGAGGCGCCGCGACCTTGGTGGCTCAGCCCCCCTTGCCATCGGCCTCTCTGTAGCCCTTGGACACCTCCTGGCTATTGACTACACTGGCTGTGGGATTAACCCTGCTCGGTCCTTCGGCTCTGCGGTGATCACACACAACTTCAGCAACCACTGG Pteropus_vampyrus ATGGCCAGCGAGTTCAAGAAGAAGCTCTTCTGGAGGGCGGTGGTGGCCGAGTTCCTGGCCATGACCCTCTTCGTCTTCATCAGCATTGGTTCTGCCTTGGGCTTCAACTACCCGTTGAAGAACAACCAGACGTCGGGTGCGACTCAGGACAACGTGAAGGTGTCACTGGCTTTCGGGCTGAGCATCGCCACGCTGGCCCAGAGCGTGGGCCACATCAGCGGTGCCCACCTCAACCCGGCCGTCACGCTGGGGCTGCTGCTCAGCTGCCAGATCAGCATCCTCCGGGCCGTCATGTACATCATCGCCCAGTGCGTGGGGGCCATCGTCGCCACCGCCATCCTCTCAGGCATCACCTCCTCCCTGAGCAACAACTCTCTCGGCCGCAATGAGCTGGCCCCTGGCGTGAACTCAGGCCAGGGCCTGGGCATCGAGATCATCGGCACCCTGCAGCTGGTGCTGTGCGTGCTGGCCACCACTGATCGGAGGCGGCGTGACCTCGGGGGCTCAGCGCCCCTTGCCATAGGCCTCTCTGT??????????????????????????????????????????????????????????????????????????????????????????????????????? Rattus_norvegicus ATGGCCAGCGAAATCAAGAAGAAGCTCTTCTGGAGGGCTGTGGTGGCTGAGTTCCTGGCCATGACCCTCTTCGTCTTCATCAGCATCGGTTCTGCCCTAGGCTTCAATTACCCACTGGAGAGAAACCAGACG------CTGGTCCAGGACAATGTGAAGGTGTCACTGGCCTTTGGTCTGAGCATCGCTACTCTGGCCCAAAGTGTGGGTCACATCAGTGGTGCTCACCTCAACCCAGCGGTCACACTGGGGCTTCTGCTCAGCTGTCAGATCAGCATCCTCCGGGCTGTCATGTATATCATCGCCCAGTGTGTGGGAGCCATCGTTGCCTCCGCCATCCTCTCCGGCATCACCTCCTCCCTGCTCGAGAACTCACTTGGCCGAAATGACCTGGCTCGAGGTGTGAACTCCGGCCAGGGCCTGGGCATTGAGATCATTGGCACCCTGCAGCTGGTGCTGTGCGTTCTGGCTACCACTGACCGGAGGCGCCGAGACTTAGGTGGCTCAGCCCCACTTGCCATTGGCTTGTCTGTGGCTCTTGGACACCTGCTGGCCATTGACTACACTGGCTGTGGGATCAACCCTGCCCGGTCATTTGGCTCTGCTGTGCTCACCCGCAACTTCTCAAACCACTGG Tupaia_belangeri ATGGCCAGCGAGTTCAAGAAGAAGCTCTTCTGGAGGGCAGTGGTGGCCGAGTTCCTGGCCATGACCCTCTTCGTCGTCATCAGCATCGGTTCTGCCCTGGGCTTCCGTTACCCCGTGGGGAGCAACCAGACA------GTGGTGCAGGACAACGTGAAGGTATCACTGGCCTTCGGGCTGAGCATCGCCACGCTGGCCCAGAGCGTGGGCCACATCAGCGGTGCCCACCTCAACCCGGCCGTCACGCTGGGCCTGCTGCTCAGCTGTCAGATCAGCATCCTCCGGGCCATCATGTACATCATCGCCCAGTGCGTGGGGGCCATCGTCGCCACCGCCATCCTCTCGGGCATCACTTCCTCTCTGTCCAACAACTCTCTCGGCCGCAACGACCTGGCTAAGGGAGTGAACTCGGGCCAGGGCCTGGGCATCGAGATCATCGGTACCCTGCAGCTGGTGCTCTGCGTGCTAGCCACCACCGACCGGCGGCGCCGTGACCTCGGAGGCTCGGCCCCGCTGGCCATCGGCCTGTCTGTAGCCTTGGGTCACCTGCTGGCGATTGACTACACCGGCTGTGGCATTAACCCTGCCCGGTCTTTCGGCTCTGCGGTGATCACCCACGACTTCAGCAACCACTGG Tursiops_truncatus ATGGCCAGCGAGTTCAAGAAGAAGCTCTTTTGGAGGGCGGTGGTGGCCGAGTTCCTGGCCATGACCCTCTTCATCTTCATCAGCATCGGTTCCGCCCTGGGCTTCCAGTACCCGATAAAGAGCAACCAGACGACAGGTGCCGTCCAGGATAATGTGAAGGTGTCACTGGCCTTTGGGCTGAGCATTGCCACGCTGGCCCAGAGCGTGGGCCACATCAGCGGCGCCCACCTCAACCCGGCTGTCACGCTGGGGATCCTGCTTAGCTGCCAGATGAGCGTCCTCCGGGCTGTCATGTATATCATGGCCCAGTGCGTGGGGGCCATCGTCGCCACTGCCATCCTCTCGGGCATTACCTCCTCCCTGCCCAACAACTCGCTTGGCCTCAATGCGCTGGCCCCTGGCGTGAACTCGGGCCAGGGGCTGGGCATCGAGATCATCGGCACCCTGCAGCTGGTGCTATGCGTGCTGGCCACCACGGACCGGAGGCGCCGGGACCTCGGGGGCTCGGCCCCGCTCGCCATCGGCCTCTCTGTGGCCCTGGGGCACCTGCTGGCCATCGACTACACAGGCTGCAGTATTAACCCAGCCCGGTCCTTCGGCTCCGCGGTGATCACACACAACTTCCAGGACCACTGG Sousa_chinensis ATGGCCAGCGAGTTCAAGAAGAAGCTCTTTTGGAGGGCGGTGGTGGCCGAGTTCCTGGCCATGACCCTCTTCATCTTCATCAGCATCGGTTCCGCCCTGGGCTTCCAGTACCCGATAAAGAGCAACCAGACGACAGGTGCCGTCCAGGATAATGTGAAGGTGTCACTGGCCTTTGGGCTGAGCATTGCCACGCTGGCCCAGAGCGTGGGCCACATCAGCGGCGCCCACCTCAACCCGGCTGTCACGCTGGGGATCCTGCTTAGCTGCCAGATGAGCGTCCTCCGGGCTGTCATGTATATCATGGCCCAGTGCGTGGGGGCCATCGTCGCCACTGCCATCCTCTCGGGCATTACCTCCTCCCTGCCCAACAACTCGCTTGGCCTCAATGCGCTGGCCCCTGGCGTGAACTCGGGCCAGGGGCTGGGCATCGAGATCATAGGAACCCTGCAGCTGGTGCTATGCGTGCTGGCCACCACGGACCGGAGGCGCCGGGACCTCGGGGGCTCGGCCCCGCTCGCCATCGGCCTCTCTGTGGCCCTGGGGCACCTGCTGGCCATCGACTACACAGGCTGCAGTATTAACCCCGCCCGGTCCTTCGGCTCCGCGGTGATCACACACAACTTCCAGGACCACTGG Grampus_griseus ATGGCCAGCGAGTTCAAGAAGAAGCTCTTTTGGAGGGCGGTGGTGGCCGAGTTCCTGGCCATGACCCTCTTCATCTTCATCAGCATCGGTTCCGCCCTGGGCTTCCAGTACCCGATAAAGAGCAACCAGACGACAGGTGCCGTCCAGGATAATGTGAAGGTGTCACTGGCCTTTGGGCTGAGCATTGCCACGCTGGCCCAGAGCGTGGGCCACATCAGCGGCGCCCACCTCAACCCGGCTGTCACGCTGGGGATCCTGCTTAGCTGCCAGATGAGCGTCCTCCGGGCTGTCATGTATATCATGGCCCAGTGCGTGGGGGCCATCGTCGCCACTGCCATCCTCTCGGGCATTACCTCCTCCCTGCCCAACAACTCGCTTGGCCTCAATGCGCTGGCCCCTGGCGTGAACTCGGGCCAGGGGCTGGGCATCGAGATCATAGGAACCCTGCAGCTGGTGCTATGCGTGCTGGCCACCACGGACCGGAGGCGCCGGGACCTCGGGGGCTCGGCCCCGCTCGCCATCGGCCTCTCTGTGGCCCTGGGGCACCTGCTGGCCATCGACTACACAGGCTGCAGTATTAACCCCGCCCGGTCCTTCGGCTCCGCGGTGATCACACACAACTTCCAGGACCACTGG Balaenoptera_omurai ATGGCCAGCGAGTTCAAGAAGAAGCTCTTTTGGAGGGCAGTGGTGGCCGAGTTCCTGGCCATGACCCTCTTCATCTTCATCAGCATCGGTTCTGCCCTGGGCTTCCAGTACCCGATAAAGAGCAACCAGACGACAGGTGCCGTCCAGGATAATGTGAAGGTGTCACTGGCCTTTGGGCTGAGCATTGCCACGCTGGCCCAGAGCGTGGGCCACATCAGCGGAGCCCACCTCAACCCGGCTGTCACGCTGGGGCTCCTGCTCAGCTGCCAGATAAGTGTCCTCCGGGCTGTCATGTACATCATGGCCCAGTGCGTGGGGGCCATCGTCGCCACTGCCATCCTCTCGGGCGTTACCTCCTCCCTGCCCAACAACTCGCTTGGCCTCAATGCGCTGGCCCCTGGCGTGAACTCGGGCCAGGGCCTGGGCATCGAGATCATCGGCACCCTGCAGCTGGTGCTGTGCGTGCTGGCCACCACGGACCGGAGGCGCCGGGACCTCGGGGGCTCGGCCCCGCTCGCCATCGGCCTCTCTGTGGCCCTGGGGCACCTGCTGGCCATCGACTACACAGGCTGCAGTATTAACCCCGCCCGGTCCTTCGGCTCTGCGGTGATCACGCGCAACTTCCAGGACCACTGG Balaenoptera_acutorostrata ATGGCCAGCGAGTTCAAGAAGAAGCTCTTTTGGAGGGCAGTGGTGGCCGAGTTCCTGGCCATGACCCTCTTCATCTTCATCAGCATCGGTTCTGCCCTGGGCTTCCAGTACCCGATAAAGAGCAACCAGACGACAGGTGCCGTCCAGGATAATGTGAAGGTGTCACTGGCCTTTGGGCTGAGCATTGCCACGCTGGCCCAGAGCGTGGGCCACATCAGCGGAGCCCACCTCAACCCGGCTGTCACGCTGGGGCTCCTGCTCAGCTGCCAGATAAGTGTCCTCCGGGCTGTCATGTACATCATGGCCCAGTGCGTGGGGGCCATCGTCGCCACTGCCATCCTCTCGGGCGTTACCTCCTCCCTGCCCAACAACTCGCTTGGCCTCAATGCGCTGGCCCCTGGTGTGAACTCGGGCCAGGGCCTGGGCATCGAGATCATCGGCACCCTGCAGCTGGTGCTGTGCGTGCTGGCCACCACGGACCGGAGGCGCCGGGACCTCGGGGGCTCGGCCCCGCTCGCCATCGGCCTCTCTGTGGCCCTGGGGCACCTGTTGGCCATCGACTACACAGGCTGCAGTATTAACCCCGCCCGGTCCTTCGGCTCTGCGGTGATCACGCGCAACTTCCAGGACCACTGG Mesoplodon_densirostris ATGGCCAGCGAGTTCAAGAAGAAGCTCTTTTGGAGGGCAGTGGTGGCTGAGTTCCTGGCCATGACCCTCTTCATCTTCATCAGCATCGGTTCTGCCCTGGGCTTCCAGTACCCGATAAGGAGCAACCAGACGACAGGTGCCGTCCAGGATAATGTGAAGGTGTCCCTGGCCTTTGGGCTGAGCATTGCCACGCTGGCCCAGAGCGTGGGCCACATCAGCGGAGCCCACCTCAACCCGGCTGTCACGCTGGGGCTCCTGCTCAGCTGCCAGATAAGTGTCCTCCGGGCTGTCATGTACATCATAGCCCAGTGCGTGGGGGCGATCGTCGCCACTGCCATCCTTTCGGGCATTACCTCCTCCCTGCCCAACAACTCGCTTGGCCTCAATGCGCTGGCCCCTGGCGTGAACACGGGCCAGGGGCTGGGCATCGAGATCATCGCCACCCTGCAGCTGGTGCTGTGCGTGCTCGCCACCACGGACCGGAGGCGCCGGGACCTCGGGGGCTCGGCGCCACTCGCCATCGGCCTCTCTGTGGCCCTGGGGCACCTGCTGGCCATCGACTACACAGGCTGCAGTATTAACCCAGCCCGGTCCTTCGGCTCCGCGGTGATCACGCACAACTTCCAGGACCACTGG Kogia_simus ATGGCCAGCGAGTTCAAGCAGAAGCTCTTTTGGAGGGCAGTGGTGGCCGAGTTCCTGGCCATGACCCTCTTCATCTTCATCAGCATCGGTTCTGCCCTGGGCTTCCAGTACCCGATAAAGAGCAACCAGACGACAGGTGCGGTCCAGGATAACGTGAAGGTGTCGCTGGCCTTTGGGCTGAGTATTGCCACGCTGGCCCAAAGCGTGGGCCACATCAGCGGAGCCCACCTCAACCCGGCTGTCACGCTGGGGCTCCTGCTCAGCTGCCAGATGAGTGTCCTCCGGGCTGTCATGTACATCATGGCCCAGTGCGTGGGGGCCATCGTCGCCACTGCCATCCTCTCGGGCATTACCTCCTCCCTGCCCAACAACTCGCTTGGCCTCAATGCGCTGGCCCCTGGCGTGAACTCAGGCCAGGGCCTGGGCATCGAGATCATCGGCACCCTGCAGCTGGTGCTGTGCGTGCTGGCCACCACGGACCGGAGGCGCCGGGACCTCGGCGGCTCGGCCCCGCTCGCCATCGGCCTCTCTGTGGCCCTGGGGCACCTGCTGGCCATCGACTACACAGGCTGCAGTATTAACCCAGCCCGGTCCTTCGGCTCCGCGGTGATCACGCATAACTTCCAGGACCACTGG Delphinapterus_leucas ATGGCCAGCGAGTTCAGGAAGAAGCTCTTCTGGAGGGCAGTGGTGGCCGAGTTCCTGGCCATGACCCTCTTCATTTTCATCAGCATTGGTTCCGCCCTGGGCTTCCAGTACCCGATAAAGAGCAACCAGACGGCAGGTGCCATCCAGGATAACGTGAAGGTGTCTCTGGCCTTTGGGCTGAGCATTGCCACGCTGGCCCAGAGCGTGGGCCACATCAGCGGAGCCCACCTCAACCCGGCTGTCACGCTGGGGATCCTGCTTAGCTGCCAGATGAGTGTCCTCCGGGCTGTCATGTACATCATGGCCCAGTGCGTGGGGGCCATCGTCGCCACTGCCATCCTCTCGGGCATTACCTCCTCTCTGCCCAACAACTCGCTTGGCCTCAATGCGCTGGCCCCTGGCGTGAACTCGGGCCAGGGGCTGGGCATCGAGATCATCGGCACCCTGCAGCTGGTGCTATGCGTGCTGGCCACCACGGACCGGAGGCGCCGGGACCTCGGGGGCTCGGCCCCGCTCGCCATCGGCCTCTCTGTGGCCCTGGGGCACCTGCTGGCCATCGACTACACAGGCTGCAGTATTAACCCAGCCCGGTCCTTCGGCTCCGCGGTGATCACACACAACTTCCAGGACCACTGG ; END; BEGIN ASSUMPTIONS; TYPESET * UNTITLED = unord: 1 - 636; END; BEGIN TREES; Title 'Trees from "AQP1.tree"'; LINK Taxa = AQP1; TRANSLATE 1 Bos_taurus, 2 Canis_familiaris, 3 Cavia_porcellus, 4 Echinops_telfairi, 5 Equus_caballus, 6 Felis_catus, 7 Gorilla_gorilla, 8 Homo_sapiens, 9 Macaca_mulatta, 10 Macropus_eugenii, 11 Microcebus_murinus, 12 Mus_musculus, 13 Ochotona_princeps, 14 Otolemur_garnettii, 15 Pan_troglodytes, 16 Pteropus_vampyrus, 17 Rattus_norvegicus, 18 Tupaia_belangeri, 19 Tursiops_truncatus, 20 Sousa_chinensis, 21 Grampus_griseus, 22 Balaenoptera_omurai, 23 Balaenoptera_acutorostrata, 24 Mesoplodon_densirostris, 25 Kogia_simus, 26 Delphinapterus_leucas; TREE AQP1_tree = (4,10,((16,((5,(1,((25,(24,(26,(21,(20,19))))),(22,23)))),(2,6))),((13,(14,(3,(12,17)))),(11,(18,(9,(7,(8,15))))))))[% ] [%unrooted = on ]; END; BEGIN CODONS; CODESET * UNTITLED = universal: 1 - 636; END; BEGIN MESQUITECHARMODELS; ProbModelSet * UNTITLED = 'Jukes-Cantor': 1 - 636; END; Begin MESQUITE; MESQUITESCRIPTVERSION 2; TITLE AUTO; tell ProjectCoordinator; timeSaved 1376878253035; getEmployee #mesquite.minimal.ManageTaxa.ManageTaxa; tell It; setID 0 8827610872482107439; tell It; attachments ; endTell; endTell; getEmployee #mesquite.charMatrices.ManageCharacters.ManageCharacters; tell It; setID 0 1627465939778673396; mqVersion 275; checksumv 0 3 994116616 null getNumChars 636 numChars 636 getNumTaxa 26 numTaxa 26 short true bits 15 states 15 sumSquaresStatesOnly 313941.0 sumSquares 313941.0 longCompressibleToShort false usingShortMatrix true NumFiles 1 NumMatrices 1; mqVersion; endTell; getWindow; tell It; suppress; setResourcesState false false 100; setPopoutState 400; setExplanationSize 0; setAnnotationSize 0; setFontIncAnnot 0; setFontIncExp 0; setSize 700 464; setLocation 8 8; setFont SanSerif; setFontSize 10; getToolPalette; tell It; endTell; desuppress; endTell; getEmployee #mesquite.trees.ManageTrees.ManageTrees; tell It; showTrees 0 #mesquite.lists.TreesList.TreesList; tell It; setTreeBlock 1; getWindow; tell It; newAssistant #mesquite.lists.NumForTreeList.NumForTreeList; tell It; suppress; setValueTask #mesquite.trees.NumberOfTaxa.NumberOfTaxa; desuppress; endTell; newAssistant #mesquite.lists.TreeListRooted.TreeListRooted; newAssistant #mesquite.lists.TreeListPolys.TreeListPolys; newAssistant #mesquite.lists.TreeListPolyAssumption.TreeListPolyAssumption; setExplanationSize 30; setAnnotationSize 20; setFontIncAnnot 0; setFontIncExp 0; setSize 600 397; setLocation 8 8; setFont SanSerif; setFontSize 10; getToolPalette; tell It; setTool mesquite.lists.TreesList.TreesListWindow.ibeam; endTell; setActive; endTell; showWindow; endTell; endTell; endTell; end;