#NEXUS [written Wed Oct 23 13:26:08 MST 2013 by Mesquite version 2.75 (build 564) at schumaker10/169.254.2.143] BEGIN TAXA; TITLE Taxa; DIMENSIONS NTAX=12; TAXLABELS Arabidopsis_lyrata_NHX6 Capsella_rubella_NHX6 Leavenworthia_alabamica_NHX6a Eutrema_salsugineum_NHX6 Brassica_rapa_NHX6b Schrenkiella_parvula_NHX6 Sisymbrium_irio_NHX6 Aethionema_arabicum_NHX6 Leavenworthia_alabamica_NHX6b Brassica_rapa_NHX6a Neslia_paniculata_NHX6 Arabidopsis_thaliana_NHX6 ; END; BEGIN CHARACTERS; TITLE 'NHX6_nucl'; DIMENSIONS NCHAR=1632; FORMAT DATATYPE = DNA GAP = - MISSING = ?; MATRIX Arabidopsis_lyrata_NHX6 ATG---TCGTCGGAGCTGCAGATTTCGCCGGCGATTCACGACCCGCAAGGTCAAGAGAAGCAGCAGCAAGCCGCCGGAGTCGGTATTTTGCTTCAGATCATGATGCTCGTCCTCTCTTTTGTACTCGGTCATGTCCTTCGCCGTCATAAGTTCTATTATCTACCTGAAGCTAGTGCTTCTCTCCTAATCGGGCTGATCGTTGGTGGTTTAGCGAACATCTCGAACACGGAGACTAGCATAAGGACATGGTTCAATTTCCACGACGAGTTCTTCTTTCTGTTTCTGCTGCCTCCCATCATATTCCAGTCAGGCTTCAGTCTACAACCTAAACCTTTCTTTTCAAACTTTGGAGCCATTGTCACTTTTTCAGTTCTTGGAACTTTTGTAGCTTCCATGGTTACTGGAGTGCTAGTGTACCTTGGCGGTGTGATGTTTCTCATGTACAGACTTCCATTCGTCGAGTGTCTCATGTTTGGCTCTCTTATCTCAGCCACTGATCCTGTCACTGTATTGTCGATATTTCAGGAACTTGGTTCAGATGTAAATTTGTATGCCTTGGTGTTTGGAGAATCAGTTTTAAATGATGCTATGGCGATATCTCTGTACAGGACAATGTCCTTGGTGAGAAGTCATTCCTCTGGACAGAATTTCTTTATGGTGATAGTCAGGTTTCTCGAAACGTTTGTCGGTTCAATGTCGGCAGGCGTTGGAGTTGGATTCACCTCTGCTCTACTATTCAAGTATGCAGGACTGGATGTTGACAATCTACAGAACTTGGAGTGCTGTCTCTTCGTGCTTTTTCCATATTTCTCATACATGCTTGCTGAAGGTCTCAGTCTATCTGGCATCGTATCGATCCTATTTACAGGGATTGTCATGAAACATTATACCTACTCAAACTTGTCTGCAAATTCTCAGCGATTTGTGTCTGCATTTTTCCATCTGATATCTTCACTGGCAGAGACTTTTGTGTTCATCTACATGGGTTTTGATATTGCCATGGAAAAGCATAGTTGGTCACACTTGGGATTCATCTTATTCTCTATTTTATTTATCGTAATAGCAAGGGCAGCTAATGTGTTTGGTTGTGGATATTTGGTCAATCTGGCACGACCTGCTCATAGGAAAATACCAATGACGCATCAAAAAGCACTTTGGTACAGTGGACTTCGAGGTGCTATGGCTTTTGCTCTTGCTCTACAATCTGTTCACGATCTCCCAGAAGGACATGGTCAAACTATATTTACTGCAACTACAGCCATTGTTGTTCTGACGGTGTTGCTGATTGGAGGATCCACTGGTACAATGCTTGAAGCCCTAGAGGTAGTAGGTGATAGCCACGATACATCCTTAGGTGATGGCTTTGAGGTGGTGAACAGTCGTTTTATGAAT---AGTTATGATGATGAAGATACACCGCCAGGAAGTGGATTCAGGACAAAACTAAGAGAGCTCCATAAGAGTGCGGCATCATTCACAGAACTAGATAGGAACTACCTAACACCGTTCTTCACAAGTAACAACGGAGATTATGATGATGAG------------GGTAACATTGAGCAACACCATGAAGAGCGAATACCATTTACTAGAAGAGGAAGTGTAAATAACCGCGGC--------- Capsella_rubella_NHX6 ATG---TCGTCGGAGGTACAGATTTCGCCGGCGATTCACGACCCGCAAGGGCAAGAGAAGCAGCAGCAAGCCGCCGGAGTCGGAATTTTGCTTCAGATCATGATGCTCGTCCTCTCTTTTGTACTGGGTCATGTCCTTCGCCGTCATAAGTTCTATTATCTGCCTGAAGCTTCTGCTTCGCTTCTAATCGGGCTGATCGTTGGTGGTTTAGCCAACATCTCGAACACGGAGACTAGCATAAGGACATGGTTCAATTTCCACGATGAGTTCTTCTTTCTGTTTCTGCTGCCTCCCATCATATTCCAGTCAGGCTTCAGTCTGCAACCTAAACCTTTCTTTTCAAACTTTGGAGCCATTGTCACTTTTTCAGTGCTTGGAACTTTTGTAGCTTCCATGGTCACTGGATTGCTAGTGTACCTTGGCGGAGTGATGTTTCTCATGTACAGACTTCCATTCGTTGAGTGTCTCATGTTTGGCTCTCTTATCTCAGCCACTGATCCTGTCACTGTATTGTCTATATTTCAGGAACTTGGTTCAGATGTAAATTTGTATGCCCTGGTGTTTGGAGAATCAGTTTTAAATGATGCTATGGCGATATCTCTCTACAGGACAATGTCCTTGGTGAGAAGTCATTCCTCTGGACAAAATTTCTTTATGGTGATAGTCAGGTTTCTCGAAACGTTTGTTGGTTCAATGTCTGCAGGCGTTGGAGTTGGATTTACCTCTGCCCTCCTATTCAAGTATGCAGGACTGGATGTTGACAATCTGCAGAACTTGGAGTGCTGTCTCTTTGTTCTTTTTCCATATTTCTCATACATGCTTGCTGAAGGTCTCAGTCTTTCTGGCATCGTATCGATTCTATTTACAGGGATTGTCATGAAACATTATACCTACTCAAACTTGTCTGCAAATTCTCAGCGATTTGTGTCTGCATTTTTTCATCTGATATCTTCACTGGCAGAGACTTTTGTGTTCATCTACATGGGTTTTGATATTGCCATGGAAAAGCATAGTTGGTCACATGTGGGATTCATCTTTTTCTCTATTTTATTTATCGTAATTGCAAGGGCAGCTAATGTGTTTGGTTGTGGATATTTGGTCAATCTGGCACGACCTGCTCATAGGAAAATACCAATGACGCACCAAAAAGCACTTTGGTATAGTGGACTTCGAGGTGCTATGGCTTTTGCTCTTGCTCTGCAATCTGTTCACGATCTCCCAGAAGGACATGGTCAAACTATATTCACTGCAACTACAGCCATTGTTGTTCTGACGGTGTTACTGATTGGAGGATCCACTGGTACAATGCTTGAAGCCCTAGAGGTTGTAGGTGATAGCCACGATCCATCTTTAGGTGATGGCTTTGAGGTGGTGAACAGTCGTTATATGACT---AGTTATGATGATGAAGATACACCGTCAGGGAGTGGATTCAGGACAAAATTAAGAGAGTTCCATAAGAGTGCGGCATCATTCACAGAACTAGATAGGAACTACCTAACACCGTTCTTCACAAGTAACAACGGAGATTATGATGATGAG------------GGTAACATACAGCAACACCATGAAGAACGAATCCCATTTACTAGAAGAGGAAATCTAAATAACCGCGGC--------- Leavenworthia_alabamica_NHX6a ATG---TTGTCGGAGCTGCAAATTTCGCCGTCGATTCACGACCCGCAAGGGCAAGAAAAGCAGCAGCAAGCCGCCGGAGTCGGGATTTTGCTTCAGATCATGATGCTTGTTCTCTCTTTTGTACTCGGTCATGTGCTTCGCCGTCATAAGTTCTATTATCTACCTGAAGCTAGTGCTTCTCTTCTAATCGGGCTGATCGTTGGTGGTTTAGCGAATATCTCGAACACGGAGACTAGCATAAGGACATGGTTCAACTTCCACGATGAGTTCTTCTTTCTGTTTCTGCTACCCCCCATTATATTCCAGTCAGGCTTCAGTCTACAACCCAAACCTTTCTTTTCAAACTTTGGGGCCATCGTCACTTTTTCTGTACTTGGAACTTTTGTAGCTTCCATGGTTACTGGGTTGCTAGTGTACCTTGGCGGTGTGATGTTTCTCATGTACAAACTTCCACTGGTTGAGTGTCTCATGTTTGGCTCTCTTATCTCAGCCACTGATCCTGTCACCGTCTTATCTATATTTCAGGAACTTGGTTCTGATGTAAATTTGTATGCCCTGGTGTTTGGAGAATCAGTTTTAAATGATGCAATGGCCATATCTCTGTACAGGACAATGTCCTTGGTTAGAAGTAACTCCTCTGGACAGAATGTCTTTATGGTGATAGTCAGGTTTCTAGAAACGTTTGTCGGTTCAATGTCTGCAGGCGTTGGAGTTGGATTCATCTCTGCTCTCTTATTCAAGTATGCTGGCCTGGATGTTGACAATCTGCAGAACTTGGAATGTTGTCTCTTCGTACTTTTTCCATATTTCTCATACATGCTTGCTGAAGGTCTCAGTCTATCTGGCATTGTATCGATTCTATTTACAGGGATTGTCATGAAGCATTATACCTACTCAAACTTGTCTGAAAATTCTCAGCAATTTGTGTCAGCATTTTTTCATCTGATATCTTCCCTGGCAGAGACATTTGTGTTCATCTATATGGGTTTTGATATTGCCATGGAAAAGCATAGTTGGTCACACGTGGGATTCATCTTTTTCTCTATTCTGTTTATCGTAATTGCAAGGGCAGCTAATGTGTTTGGTTGTGGATATTTGGTCAATCTGGCACGACCTACTCATAGGAAAATACCGATGACACATCAAAAAGCACTTTGGTACAGTGGGCTTAGAGGTGCTATGGCTTTTGCGCTTGCTCTGCAATCTGTTCACGATCTCCCAGAAGGACATGGTCAAACTATATTCACTGCAACTACAGCCATCGTTGTTCTGACGGTGTTGCTAATAGGAGGATCAACTGGTACAATGCTTGAAGCCCTAGAGGTTGTAGGTGATAGCCGTGATACATCCTTAGGTGATGGATTTGAGGTGGTGAACAGTCGTTATATGAAC---AGTTATGATGATGAAGACACACCTTCTGGAAGTGGATTCAGGACAAAACTAAGAGATTTCCATAGGAGTACGGCCTCGTTCACAGAACTAGACAGGAACTACCTAACACCGTTTTTCACAAGTAACAACGGAGATTATGATGAGGAA------------GGTGACACAGACCTACACCATGAAGAAAGAATTCCCTTTGCTAGAAGAGGAAATCTAAATAACCGCGGC--------- Eutrema_salsugineum_NHX6 ATG------TCGGAGCTGCAGATTTCGCCGGCGATTCACGATCCGCAAGGCCAAGAGAAGCAGCAGCAGGCCGCCGGAGTTGGGATTTTGCTTCAGATCATGATGCTTGTCCTCTCTTTTGTACTCGGTCATGTCCTTCGCCGTCATAAGTTCTATTATCTACCCGAAGCTAGTGCTTCGCTTCTCATCGGGTTGATCGTTGGTGGTTTGGCGAACATCTCGAACACGGAGACTAGCATAAGGACATGGTTCAATTTCCACGACGAGTTCTTCTTTCTGTTTCTGCTGCCACCCATTATATTCCAGTCAGGATTCAGTCTACAACCCAAACCATTCTTTTCAAACTTTGGAGCCATTGTCACTTTCTCCGTACTTGGAACTTTCGTAGCTTCCATGGTCACAGGCGTGCTAGTGTACCTTGGCGGTGTGATGTTTCTCATGTACAAACTTCCATTCGTTGAGTGTCTCATGTTTGGCTCTCTTATCTCAGCCACTGATCCTGTCACTGTCTTGTCCATATTTCAGGAACTTGGCTCCGATGTGAATTTGTATGCCCTGGTGTTTGGAGAATCAGTTTTGAATGATGCTATGGCCATATCTCTCTACAGGACAATGTCCTTGGTGAGAAGTCACTCATCTGGACAGAATATCTTTATGGTGGTAGTCAGGTTTCTCGAAACCTTTATCGGTTCAATGTCTGCAGGGGTTGGAGTTGGATTTACATCTGCTCTCCTCTTCAAGTATGCAGGGCTGGATGTTGATAATTTGCAGAACTTGGAGTGCTGCCTCTTTGTGCTTTTCCCATATTTCTCATACATGCTTGCTGAGGGTCTCAGTCTATCTGGCATTGTATCGATTCTATTTACTGGGATTGTCATGAAGCATTATACCTACTCAAACTTGTCTGTAAATTCTCAGCGATTTGTGTCTGCATTCTTTCATCTGATATCTTCGCTGGCAGAGACATTTGTGTTCATCTACATGGGTTTTGATATTGCCATGGAAAAGCATAGTTGGTCACACTTGGGATTCATCTTTTTTTCTATTCTGTTTATCGTTATTGCGAGGGCAGCTAATGTGTTTGGTTGTGGATATTTGGTCAACCTGGCACGACCTGCTCATAGGAAAATACCAATGACGCATCAAAAAGCACTTTGGTACAGTGGACTTCGAGGCGCTATGGCTTTTGCTCTTGCTCTACAATCTGTTCATGATCTTCCAGAAGGACATGGTCAAACCATCTTCACAGCAACGACAGCCATTGTTGTTCTGACGGTGTTGCTAATTGGAGGATCCACTGGTACAATGCTTGAAGCCCTAGAGGTTGTAGGCGATAGCCATGATACATCCCTTGGTGATGGCTTTGAGGTGGTGAACAATCGTTTCATGACA---AGTTATGATGATGAAGATTCACCATCAGGGAGTGGATTCAGGACAAAACTAAGAGAGTTCCATAAGAGCGCCGCGTCATTTACAGAACTAGACAGAAACTACCTAACACCGTTCTTCACAAGTAACAACGGAGATTATGATGATGAGGAT------------AACACTGAGCAAGACCATGAAGAACGAATGCCTTTCACTAGAAGAGGGAATTTTAATAACCGCGGC--------- Brassica_rapa_NHX6b ATG------TCGGAGCTGCAGATTTCGCCGGCGATTCACGATCCGCAGGGGCAAGAGAAGCAGCAGCAAGCCGCGGGAGTGGGGATTTTGCTTCAGATCATGATGCTTGTCCTCTCTTTCGTACTTGGCCATGTCCTTCGCCGTCACAAGTTCTATTACCTTCCCGAAGCTAGTGCTTCCCTTCTCATCGGATTGATCGTTGGTGGTTTAGCGAATGTCTCGAACACGGAGACTAGCATAAGGACATGGTTCAATTTCCACGATGAGTTCTTCTTCCTGTTTCTGCTGCCACCAATCATATTCCAGTCTGGATTCAGTCTACAGCCCAAACCTTTCTTTTCAAACTTCGGAGCCATTGTCACTTTTTCTGTACTTGGAACTTTTGTGGCGTCCATGGTTACTGGGGTGCTAGTGTACCTTGGCGGCGTGATGTTTCTAATGTACAAGCTTCCATTCGTTGAGTGTCTCATGTTTGGCTCCCTTATCTCAGCCACGGATCCTGTCACCGTCTTGTCTATATTTCAGGAACTTGGATCGGATGTAAATTTGTATGCTCTGGTCTTTGGGGAATCGGTTTTGAATGATGCTATGGCCATATCTCTGTACAGGACAATGTCCTTGGTAAGAAGTCAATCAGCTGGTCAGAATTTCTTTATGGTGATAGTCAGATTTCTCGAAACCTTTGTCGGTTCAATGTCTGCAGGGGTTGGAGTTGGATTTATATCTGCTCTCCTCTTCAAGTATGCAGGGCTAGATGTTGACAATCTGCAGAACTTGGAGTGCTGCCTCTTTGTGCTTTTTCCATATTTCTCATACATGCTTGCTGAAGGTCTCAGTCTATCTGGCATCGTATCGATTCTATTTACTGGGATTGTCATGAAGCATTACACCTACTCAAACTTGTCTACAAATTCTCAGCGATTTGTGTCTTCATTTTTTCATCTGATATCTTCCCTGGCAGAGACATTTGTGTTCATCTACATGGGTTTTGATATTGCCATGGAAAACCACAGTTGGTCACATGTGGGATTCATCCTTTTCTCTATTCTGTTCATCGTAATTGCAAGGGCAGCGAATGTGTTTGGTTGTGGATATTTGGTCAACCTTGTACGACCTGCACATAGGAAAATACCTATGACGCATCAAAAAGCACTTTGGTACAGTGGACTTCGAGGTGCTATGGCCTTTGCTCTTGCTCTGCAATCTGTTCATGATCTCCCGGAAGGACATGGTCAAACTATCTTCACAGCAACTACAGCAATTGTTGTTGTAACGGTGTTGCTTATTGGAGGATCCACTGGTACAATGCTTGAAGCCCTAGAGGTTGTAGGTGATGGCCATGATGCAACCCTTGGTGATGGCTTTGAGGTGGTGAACGATCTGTATATGAAT---AGGTTCGATGATGAAGATTCACCATCAGGAAGTGGATTCAGGACAAAACTAAGAGAGTTCCACAAGAGCGCTGCGTCATTTACAGAACTAGACAAGAACTACCTAACACCGTTCTTCACAAGTAATAACGGAGACTATGATGATGATGATGATGAC------AAT---GAGCATCACCATGAAGAAACAACTCCTTTTACTAGAAGAGTGGATTTTTATAACCGGGGA--------- Schrenkiella_parvula_NHX6 ATG------TCGGAGCTGCAGATTTCGCCGTCGATTCACGACCCGCAAGGGCAAGAGAAGCAGCAGCAGGCCGCCGGAGTCGGGATTTTGCTTCAGATCATGATGCTTGTCCTCTCTTTTGTGCTCGGTCATGTCCTTCGTCGTCACAAGTTCTATTATATACCCGAAGCTAGTGCTTCGCTTCTCATCGGGCTGATCGTTGGTGGTTTAGCGAACATCTCGAACACGGAGACTAGTATAAGGACATGGTTCAATTTCCACGATGAGTTCTTCTTTCTCTTTCTGCTGCCGCCCATCATATTCCAATCAGGATTCAGTCTACAACCCAAACCTTTCTTTTCAAACTTTGGAGCCATTGTCACTTTTTCTGTACTTGGAACTTTTGTAGCTTCCATTGTTACTGGCGTGCTAGTGTACCTTGGCGGCGTGATGTTTCTCATGTACAGACTTCCATTCGTTGAGTGTCTCATGTTTGGCTCTCTTATCTCAGCCACTGATCCTGTCACTGTCCTGTCTATATTTCAGGAGCTTGGCTCGGATGTAAATTTGTATGCCCTGGTGTTTGGAGAATCAGTGTTGAATGATGCTATGGCTATATCTCTGTACAGGGCAATGTCCTTGGTGAGAAGTCACTCATCTGGTCAGAATTTCTTTATGGTGATAGTCAGGTTTCTCGAAACCTTTGTCGGTTCAATGTCTGCAGGAGTTGGAGTTGGATTTACTTCTGCTCTCCTCTTCAAGTATGCAGGGCTGGATGTTGACAATCTGCAGAACTTGGAGTGCTGCCTCTTCGTGCTTTTTCCATATTTCTCATACATGCTTGCTGAAGGTCTCAGTCTATCTGGCATCGTATCGATTCTATTTACTGGGATTGTCATGAAGCATTATACCTACTCAAACTTGTCTGCAAACTCTCAACGATTTGTGTCTGCATTTTTTCATCTGATATCTTCCCTGGCAGAGACATTTGTGTTCATCTACATGGGTTTTGATATTGCCATGGAAAAGCATAGTTGGTCACACGTGGGGTTCATCTTTTTCTCTATTCTGTTTATTGTAATTGCGAGGGCAGCTCATGTATTTGGTTGTGGATATTTGATCAACCTGGCACGACCTGCACATCGGAAGATACCAATGACACATCAAAAAGCACTTTGGTACAGTGGACTTCGAGGTGCTATGGCTTTTGCTCTTGCTCTGCAATCTGTTCACGATCTCCCAGAAGGACATGGTCAAACTATATTCACAGCAACTACAGCCATTGTTGTTTTGACGGTGCTGCTAATTGGAGGATCCACTGGTACAATGCTTGAATCCCTAGAGGTTGTTGGCGATAACCGTGATACATCCCTTGGTGATGGCTTTGAGGTGGTGAACAATCGTTATATGACT---AGTTATGATGATGAAGATTCACCATCAGGAAGTGGATTCAGGACAAAATTAAGAGAGTTGCATAAAAGCGCTGCTTCATTTACAGAACTAGACAGGAACTACTTAACACCGTTCTTCACAAGTAATAACGGAGATTCTGATGATGATGATGATGATGATGGTAACACTGAGCAACACCATGAAGAACGAATTCCATTTACTAGAAGAGGGAATTTGAATAACCGGAGC--------- Sisymbrium_irio_NHX6 ATG------TCGGAGCTGCAGATTTCGCCGGCGATTCACGACCCGCAAGGTCAAGAGAAGCAGCAGCAGGCCGCCGGAGTGGGGATTTTGCTTCAGATCATGATGCTTGTTCTCTCTTTTGTACTCGGTCATGTCCTTCGCCGTCACAAGTTCTATTATCTACCTGAAGCTAGTGCTTCGCTTCTCATCGGTATGATCGTTGGTGGTTTAGCGAACATCTCGAACACGGAGACTAGCATTAGGACTTGGTTTAATTTCCACGATGAGTTCTTCTTTCTGTTTCTGTTGCCGCCCATCATATTCCAGTCAGGATTCAGTCTTCAACCCAAACCTTTCTTTTCAAACTTTGGAGCCATTGTTACCTTTTCTGTGCTTGGAACTTTTGTAGCTTCAATTGTTACTGGCGTGCTTGTGTACCTTGGTGGCGTGATGTTTCTCATGTACAGACTTCCATTCGTTGAGTGTCTCATGTTTGGCTCTCTTATCTCAGCCACTGATCCTGTCACTGTCTTGTCTATATTTCAGGAACTTGGATCGGATGTAAATTTGTATGCCCTGGTGTTCGGAGAATCAGTTTTGAATGATGCTATGGCCATATCACTGTACAGGACAATGTCCTTGGTGAGAAGTCACACATCTGGTCAAAATTTCTTTATGGTGATAGTCAGATTTCTCGAAACCTTTGTCGGTTCAATGTCTGCAGGGGTTGGAGTTGGATTTACTTCTGCTCTCCTCTTCAAGTATGCAGGGCTGGATGTTGACAATCTGCAGAACTTGGAATGCTGCCTGTTTGTGCTTTTTCCATATTTCTCATACATGCTTGCAGAAGGTCTCAGTCTCTCTGGCATCGTATCGATTCTATTTACTGGGATTGTCATGAAGCATTATACCTACTCAAACTTGTCTGCAAATTCTCAGCGATTTGTGTCTGCGTTTTTTCATCTGATATCTTCCCTGGCAGAGACATTTGTGTTCATCTACATGGGTTTCGATATTGCCATGGAAAAGCACAGTTGGTCACACTTGGGATTCATATTTTTCTCTATTCTGTTCATCGTTATTGCGAGGGCAGCGAATGTGTTTGGTTGTGGATATTTGGTCAACCTAGCACGACCTGCACATAGGAAAATACCTATGACGCATCAAAAAGCACTTTGGTACAGTGGACTTCGAGGTGCTATGGCTTTTGCTCTTGCTCTGCAATCTGTTCACGATCTCCCAGAAGGACATGGTCAGACTATCTTCACAGCAACTACAGCCATTGTTGTTGTAACGGTGTTGCTGATTGGAGGATCCACTGGTACAATGCTTGAAGCCCTAGAGGTCGTTGGCGATAGCCGTGATACATCCCTTGGTGACGGCTTTGAGGTGGTGAACAATCGTTATATGACT---AGCTTTGATGATGAAGATTCACCATCAGGAAGTGGATTCAGGACAAGACTAAGAGAGTTCCATAAAAGCGCTGCGTCGTTTACAGAACTAGACAGGAACTACCTAACACCGTTCTTCACAAGTAATAACGGAGATTATGATGATGATGATGAT------GGTAACAATGAGCAACACCATGAAGAACGAATTCCTTTTACTAGAAGAGGGAATTTTAATAACCGGGGA--------- Aethionema_arabicum_NHX6 ATG------TCGGAGGTGCAGATTTCGCCGTCGATTCACGACCCGCAAGGGCAAGAGAAGCAGCAGCAAGCCGCTGGAGTCGGGATTTTGCTTCAGATCATGATGCTTGTTCTCTCTTTTGTACTCGGTCATGTTCTTCGTCGTCATAAGTTCTATTATCTACCTGAAGCTAGTGCTTCTCTTCTCATCGGGCTGATCGTTGGTATTTTAGCGAATATTTCGAATACGGAGACCAGCATAAGGACATGGTTCAATTTCCACGACGAGTTCTTCTTCTTGTTTCTGCTGCCGCCTATTATCTTTCAGTCAGGGTTCAGTCTCCAACCCAAACCTTTCTTCTCGAACTTTGGAGCCATTGTCACTTTTTCTGTACTTGGCACCTTTGTCGCTTCAGTTGTTACTGGCTTGCTAGTGTACCTTGGCGGTGTGATGTTTCTTATGTACAGACTTCCATTAGTTGAGTGTCTCATGTTTGGCTCTCTTATCTCAGCCACCGATCCTGTCACTGTCTTGTCTATATTTCAGGAGCTTGGGTCAGATGTGAACCTGTATGCTCTAGTGTTTGGTGAATCAGTTTTAAATGATGCTATGGCCATTTCTCTGTATAGGACAATGTCCTTAGTGAGAAGTAACTCATCTGGACAAAATTTCCTTATGGTTATAGTCAGGTTTCTGGAAACCTTTATCGGCTCAATGTCTGCAGGGGTTGGAGTTGGATTTATTTCTGCTCTCCTCTTCAAGTATGCAGGTCTGGATGTTGAAAATTTGCAGAACTTAGAGTGCTGCCTCTTTGTGCTTTTTCCATATTTTTCATACATGCTTGCTGAAGGTCTCAGCCTATCTGGCATTGTATCAATTCTATTTACCGGGATTGTCATGAAGCATTACACCTTCTCAAATTTGTCTGGAAATTCTCAACGATTTGTATCTGCATTTTTTCATCTGATATCTTCATTGGCTGAGACGTTTACGTTCATCTACATGGGTTTTGATATTGCTATGGAAAAGCATAGTTGGTCACACTTGGGGTTCATCTTTTTCTCAATTCTGTTTATCATAATTGCGAGGGCAGCTAATGTGTTTGGGTGTGGATATTTAGTTAATCTGGTACGACCTTCACATAGGAAAATACCAATGACACATCAAAAAGCACTTTGGTACAGTGGACTTCGAGGTGCTATGGCGTTTGCTCTTGCTCTGCAATCGGTTCACGATCTCCCAGAAGGACATGGTCAAACTATATTCACAGCAACTACAGCCATTGTTGTTCTGACGGTGTTGCTAATTGGAGGATCCACTGGTACAATGCTTGAAGCCCTAGAGGTTGTAGGCGATAACCATGATACATCCCTTGGTGATGGATTTGAAGTGGTGACCAATCGTTACATGAGT---AATTATGATGAAGGAGATTCACCATCAGGAAGTGGATTCAGGACAAAACTAAGAGAATTTCATAGGAGCGCTGCATCCTTCACAGAACTAGACAGGAACTACCTAACACCATTCTTCACTAGTAACAATGGAGAATCTGATGATGAGGTTGAAGAA------AAT---GAACAACAACATGCAGAGCGAATTTCGTTTAGCAGAAGAGGAAATTTGAGCAACCGC------------ Leavenworthia_alabamica_NHX6b ATG---ACGTCGAAGCTGCAGATTTCGCCGTCGATTCACGACCCGCAAGGTCAAGAGAAGCAGCAACAAGCCGCAGGAGTCGGGATTTTGCTTCAGATCATGATGCTTGTCTTATCTTTTGTACTCGGTCATGTCCTTCGCCGTCATAAGTTCTATTATCTACCTGAAGCTAGTGCTTCTCTTCTAATAGGGCTGCTCGTTGGTGGTTTAGCGAATATTTCGAACACAGAGACTAGCATAAGGATATGGTTCAATTTCCACGATGAGTTCTTCTTTTTGTTTCTGTTACCGCCCATCATATTTCAGTCAGGCTTCAGTCTACAACCCAAACCTTTCTTCTCAAACTTTGGAGCCATTGTCACTTTTTCTGTACTTGGAACTTTTGTAGCTTCCATGGTTACTGGATTGCTAGTGTACCTTGGTGGTGTGATGTTTCTCATGTACAGACTTCCATTGGTTGAGTGTCTCATGTTTGGCTCTCTTATCTCTGCCACTGATCCTGTCACCGTCTTGTCTATATTTCAGGAACTTGGTTCTGATGTAAATTTGTATGCCCTGGTGTTTGGAGAATCAGTTTTAAATGATGCTATGGCCATATCTCTGTACAGGACAATGTCCTTGGTGAGAAGACACTCCTCTGGACAGAATTTCTTTATGGTGATACTCAGGTTTCTCGAGACATTTATTGGTTCAATGTCTGCAGGAGTTGGAGTTGGATTCACCTCTGCTCTCCTATTCAAGTATGCAGGGCTGGATGTTGACAATCTGCAGAACTTGGAGTGCTGTCTCTTCGTGCTTTTCCCATATTTCTCATACATGCTTGCTGAAGGTCTCAGTCTATCTGGCATTGTATCAATTCTGTTTACTGGGATTGTCATGAAGCATTATACCTACTCAAATTTGGCTCCAAATTCTCAGCGATTTGTGTCTGCATTTTTTCATCTGATATCTTCCCTGGCAGAAACATTTGTGTTCATCTACATGGGTTTTGATATTGCCATGGAAAAGCATAGTTGGTCACATGTGGGATTCATCTTTTTCTCTATTCTGTTTATCATAATTGCAAGGGCAGCTAATGTGTTTGGTTGTGGATATTTGGTAAACTTGGCACGACCTACGCATCGGAAAATACCGATGACGCATCAAAAAGCACTTTGGTACAGTGGACTACGAGGTGCTATGGCTTTTGCTCTTGCCTTGCAATCTGTTCATGAGCTCCCAGAAGGACATGGTCAAACTATATTCACTGCAACTACTGCCATAGTCGTTCTGACGGTGTTGGTAATTGGAGGATCGACAGGTACAATGCTTGAAGCCCTAGAGGTTGTAGGTGATAGCCGTGATACATCTTTAGGTGATGGATTTGAGGTGGTGAACAATCGTTATATGATGAGTAGTTATGATGAAGAAGATAGAGAGACAGGAAGTGGATTCAGGACAAAACTAAGAGACTTCCATAAGAGGGCGTCGTCATTTACAGAACTAGACAGGAACTACCTAAGACCCTTCTTCACAAGTAACAATGGAGAATATGATGATGATGATGATGAGAGTGAC---ACTGAGCAACACCATGAAGAAAGAATACCGTTTGCTAGAAGAGGAAATCTAAATAATAGAGGA--------- Brassica_rapa_NHX6a ATGTCGTCGTCGGAGCTGCAGATTTCGCCGGCGATTCACGACCCGCAGGGGCAAGAGAAGCAGCAGCAAGCCGCCGGAGTCGGGATTTTGCTCCAGATCATGATGCTCGTCCTCTCTTTCGTACTCGGCCACGTCCTTCGCCGTCATAAGTTCTATTATCTACCCGAAGCTAGTGCTTCGCTTCTCATCGGGTTGATCGTTGGTGGTTTAGCGAACGTCTCCAACACGGAGACTAGCATAAGGACATGGTTCAATTTCCACGATGAATTCTTCTTTCTGTTTCTGCTTCCGCCCATCATATTCCAATCAGGATTCAGCCTACAACCCAAACCTTTCTTTTCAAACTTTGGAGCCATTGTCACTTTCTCTGTACTTGGAACTTTTGTGGCTTCCATTGTTACTGGCGTGCTAGTGTACCTTGGCGGCGTGATGTTTCTCATGTACAGGCTTCCATTCGTCGAGTGTCTCATGTTTGGCTCTCTTATCTCAGCCACTGATCCTGTCACTGTCTTGTCTATATTCCAGGAACTTGGATCGGATGTTAATTTGTATGCCCTGGTGTTTGGAGAATCGGTTTTAAATGATGCTATGGCCATATCTCTGTACAGGACAATGTCCTTGGTAAGAAGTCACTCAACTGGTCAGAATTTCTTTATGGTGATAGTCAGGTTTCTTGAAACCTTTGTCGGGTCAATGTCTGCAGGGGTTGGAGTTGGATTTACTTCTGCTCTCCTCTTCAAGTATGCAGGGTTGGATGTTGACAATCTTCAGAACTTGGAGTGCTGCCTCTTTGTGCTTTTTCCATATTTCTCATACATGCTTGCTGAAGGTCTCAGTCTATCTGGCATCGTATCGATTCTATTTACTGGGATTGTCATGAAGCATTATACCTACTCAAACTTGTCTACAAATTCTCAGCGATTTGTGTCTGCATTTTTTCATCTGATATCTTCCCTGGCAGAGACATTTGTGTTCATCTACATGGGTTTTGATATTGCAATGGAAAAGCACAGTTGGTCACACGTGGGATTCATCTTTTTCTCGATTCTGTTCATCGTAATTGCGAGGGCAGCTAATGTGTTTGGTTGTGGATATTTGGTCAACTTAGCACGACCTGCACATAGGAAAATACCTATGACGCATCAAAAAGCACTATGGTACAGTGGACTTCGAGGGGCTATGGCTTTTGCTCTTGCTCTACAATCTGTTCACGAACTCCCAGACGGGCATGGTCAAACTATTTTCACGGCAACTACAGCCATTGTTGTTGTAACGGTGTTACTGATTGGAGGATCCACAGGTACAATGCTTGAAGCCCTAGAGGTTGTAGGCGATAGCCGTGATACATCCCTTGGTGATGGGTTTGAAGTGGTGAACAATCGGTATATGACT---AGGTTTGATGATGAAGGTTCACCATCAGAAAGTGGATTCAGGACAAAACTACGAGAGTTCCATAAGAGCGCAAAGTCATTTTCAGAACTAGACAGGAACTACTTAACACCGTTCTTCACAAGTAATAACGGAGATTATGATGAAGATGATGAT------ATTAACGATGACCAACACCATGAAGAACGGATTCCTTTTACTAGAAGAGGGAACTTTAATAACCGGGGGCTAACTTTC Neslia_paniculata_NHX6 ATG---TCGTCGGAGCTGCAGATTTCGCCGGCGATTCACGACCCGCAAGGGCAAGAAAAGCAGCAGCAAGCCGCCGGAGTCGGGATTTTGCTTCAGATCATGATGCTTGTCCTCTCTTTTGTACTCGGTCATGTTCTTCGCCGTCATAAGTTCTATTATCTACCTGAAGCTTCTGCTTCGCTTCTAATCGGGCTGATCGTTGGTGGTTTAGCGAACATCTCGAACACGGAGACTAGCATAAGGACATGGTTCAATTTCCACGATGAGTTCTTCTTTCTGTTTCTGCTGCCTCCCATCATATTCCAGTCAGGCTTCAGTCTACAACCTAAACCTTTCTTTTCAAACTTTGGAGCCATTGTCACTTTTTCAGTGCTTGGAACATTTGTAGCTTCCATGGTTACTGGATTGCTAGTGTACCTTGGCGGTGTGATGTTTCTCATGTACAGACTTCCATTCGTCGAGTGTCTCATGTTTGGCTCTCTTATCTCGGCCACTGATCCTGTTACTGTATTGTCTATATTTCAGGAACTTGGTTCAGATGTAAATTTGTATGCCCTGGTGTTTGGAGAATCAGTTTTAAATGATGCTATGGCGATATCTCTTTACAGGACAATGTCCTTGGTGAGAAGTCATTCCTCTGGACAGAATTTCTTTATGGTGATAGTCAGGTTTCTCGAAACGTTTGTGGGTTCAATGTCTGCAGGCGTTGGAGTTGGATTCACCTCTGCTCTCCTATTCAAGTATGCAGGACTGGATGTTGACAATCTGCAGAACTTGGAGTGCTGTCTCTTCGTACTTTTTCCATATTTCTCATACATGCTTGCTGAAGGTCTCAGTCTATCTGGCATCGTATCGATTCTATTTACAGGGATTGTCATGAAACATTATACCTACTCAAACTTGTCTGCAAATTCTCAGCGATTTGTGTCTGCATTTTTTCATCTGATATCTTCACTGGCAGAGACATTTGTGTTCATCTATATGGGTTTTGATATTGCCATGGAAAAGCATAGTTGGTCACACTTGGGATTCATCTTTTTCTCTATTTTATTTATCGTAATTGCAAGGGCAGCTAATGTGTTTGGTTGTGGATATTTGGTCAATCTGGCACGACCTGCTCATAGGAAAATACCAATGACGCATCAAAAAGCACTTTGGTACAGTGGACTTCGAGGTGCTATGGCTTTTGCTCTTGCTCTGCAATCTGTTCACGATCTCCCAGAAGGACATGGTCAAACTATATTTACTGCAACTACAGCCATTGTTGTTCTGACGGTGTTGCTGATTGGAGGATCCACTGGTACAATGCTTGAAGCCCTAGAGGTTGTAGGTGATAGCCACGATACATCCTTAGGTGATGGCTTTGAGGTGGTGAACAGTCGTTATATGACT---AGTTATGATGATGAAGATACACCGTCAGGAAGTGGATTCAGGACAAAACTAAGAGAGTTCCATAAGAGCGCGGCATCATTCACAGAACTAGATAAGAACTACCTAACACCGTTCTTCACAAGTAACAACGGAGATTATGATGATGAGGAT------------AACATAGAGCAACACCATGAAGAACGAATCCCATTTACTAGAAGAGGAAATCTAAATAACCGCAGC--------- Arabidopsis_thaliana_NHX6 ATG---TCGTCGGAGCTGCAGATTTCGCCGGCGATTCACGACCCGCAAGGTCAAGAGAAGCAGCAGCAAGCCGCCGGAGTCGGGATTTTGCTTCAGATCATGATGCTTGTCCTCTCTTTTGTACTCGGTCATGTCCTTCGCCGTCATAAGTTCTATTATCTACCTGAAGCTAGTGCTTCTCTTCTAATTGGGCTGATCGTTGGTGGTTTAGCGAACATCTCGAACACGGAGACTAGCATAAGGACATGGTTCAATTTCCACGATGAGTTCTTCTTTCTGTTTCTGCTGCCTCCCATCATATTCCAGTCAGGCTTCAGTTTACAACCTAAACCTTTCTTCTCAAACTTTGGAGCCATTGTCACTTTTTCAGTGCTTGGAACTTTTGTAGCTTCCATGGTTACTGGATTGCTTGTGTACCTTGGCGGTGTGATGTTTCTCATGTACAGACTTCCATTCGTCGAGTGTCTCATGTTTGGCTCTCTTATCTCAGCCACTGATCCTGTCACTGTATTGTCGATATTTCAGGAACTTGGTTCAGATGTAAATTTGTATGCCCTGGTGTTTGGAGAATCAGTTTTAAATGATGCTATGGCGATATCTCTGTACAGGACAATGTCCTTGGTGAGAAGTCATTCCTCTGGACAGAATTTCTTTATGGTGATAGTCAGGTTTCTCGAAACGTTTGTCGGTTCAATGTCTGCAGGCGTTGGAGTTGGATTCACCTCTGCTCTCCTATTCAAGTATGCAGGACTGGATGTTGACAATCTACAGAACTTGGAGTGCTGTCTCTTCGTACTTTTTCCATATTTCTCTTACATGCTTGCTGAAGGTCTCAGTCTATCTGGCATCGTATCGATTCTATTTACAGGGATTGTCATGAAACATTATACCTACTCAAACTTGTCTGCAAATTCTCAGCGATTTGTGTCTGCATTTTTCCATCTGATATCTTCACTGGCAGAGACATTTGTGTTCATCTACATGGGTTTTGATATTGCCATGGAAAAGCATAGTTGGTCACACTTGGGATTCATATTTTTTTCTATTTTATTTATCGTAATTGCAAGGGCAGCTAATGTGTTTGGTTGTGGATATTTGGTCAATCTGGCACGACCTGCTCATAGGAAAATACCAATGACACATCAAAAAGCACTTTGGTACAGTGGACTTCGAGGTGCTATGGCATTTGCTCTTGCTCTGCAATCTGTTCACGATCTTCCAGAAGGACATGGTCAAACTATATTCACTGCAACTACAGCCATTGTTGTTCTGACGGTGTTGCTGATTGGAGGATCGACTGGTACAATGCTAGAAGCCCTAGAGGTTGTAGGTGATAGCCACGATACATCCTTAGGTGATGGATTTGAGGTGGTGAACAGTCGTTATATGACT---AGTTATGATGATGAAGATACACCGCCAGGAAGTGGATTCAGGACAAAACTAAGAGAGTTCCATAAGAGTGCGGCATCATTCACAGAACTAGATAGGAATTACCTAACACCGTTCTTCACAAGTAACAACGGAGATTATGATGATGAG------------GGTAACATGGAGCAACACCATGAAGAACGAATCCCATTTACTAGAAGAGGAAATCTAAATAACCGCGGC--------- ; END; BEGIN ASSUMPTIONS; TYPESET * UNTITLED = unord: 1 - 1632; END; BEGIN CODONS; CODESET * UNTITLED = universal: 1 - 1632; END; BEGIN MESQUITECHARMODELS; ProbModelSet * UNTITLED = 'Jukes-Cantor': 1 - 1632; END; BEGIN TREES; Title 'NHX6_tree'; LINK Taxa = Taxa; TRANSLATE 1 Arabidopsis_lyrata_NHX6, 2 Capsella_rubella_NHX6, 3 Leavenworthia_alabamica_NHX6a, 4 Eutrema_salsugineum_NHX6, 5 Brassica_rapa_NHX6b, 6 Schrenkiella_parvula_NHX6, 7 Sisymbrium_irio_NHX6, 8 Aethionema_arabicum_NHX6, 9 Leavenworthia_alabamica_NHX6b, 10 Brassica_rapa_NHX6a, 11 Neslia_paniculata_NHX6, 12 Arabidopsis_thaliana_NHX6; TREE 'NHX6_tree' = ((((((10:0.03499289890050258,5:0.047599466585681635):0.007571876316101095,7:0.02658382021555321):0.00876391311292847,6:0.025733476348362788):0.006173694979468486,4:0.03453731081911269):0.004934111493579418,(((12:0.00963214053497747,1:0.015893185927691893):0.003343673448992522,(11:0.007294119135157304,2:0.019276302782382584):0.002637254380537593):0.01401411299262273,(3:0.038351382547306884,9:0.05799960769154308):0.008360411982101898):0.01933024686916522):0.04566363479710242,8:0.04566363479710242)[% ] [% ] [% setBetweenBits = selected ]; END; Begin MESQUITE; MESQUITESCRIPTVERSION 2; TITLE AUTO; tell ProjectCoordinator; timeSaved 1382559969013; getEmployee #mesquite.minimal.ManageTaxa.ManageTaxa; tell It; setID 0 7281037522225581768; endTell; getEmployee #mesquite.charMatrices.ManageCharacters.ManageCharacters; tell It; setID 0 3689746911693277758; mqVersion 275; checksumv 0 3 1235674989 null getNumChars 1632 numChars 1632 getNumTaxa 12 numTaxa 12 short true bits 15 states 15 sumSquaresStatesOnly 491184.0 sumSquares 491184.0 longCompressibleToShort false usingShortMatrix true NumFiles 1 NumMatrices 1; mqVersion; endTell; getWindow; tell It; suppress; setResourcesState true false 100; setPopoutState 400; setExplanationSize 0; setAnnotationSize 0; setFontIncAnnot 0; setFontIncExp 0; setSize 944 946; setLocation 960 0; setFont SanSerif; setFontSize 10; getToolPalette; tell It; endTell; setActive; desuppress; endTell; getEmployee #mesquite.charMatrices.BasicDataWindowCoord.BasicDataWindowCoord; tell It; showDataWindow #3689746911693277758 #mesquite.charMatrices.BasicDataWindowMaker.BasicDataWindowMaker; tell It; getWindow; tell It; setExplanationSize 30; setAnnotationSize 20; setFontIncAnnot 0; setFontIncExp 0; setSize 0 -67; setLocation 960 0; setFont SanSerif; setFontSize 10; getToolPalette; tell It; endTell; setTool mesquite.charMatrices.BasicDataWindowMaker.BasicDataWindow.arrow; colorCells #mesquite.charMatrices.ColorByState.ColorByState; tell It; setStateLimit 9; toggleUniformMaximum on; endTell; colorRowNames #mesquite.charMatrices.TaxonGroupColor.TaxonGroupColor; colorColumnNames #mesquite.charMatrices.CharGroupColor.CharGroupColor; colorText #mesquite.charMatrices.NoColor.NoColor; setBackground White; toggleShowNames on; toggleShowTaxonNames on; toggleTight off; toggleThinRows off; toggleShowChanges off; toggleSeparateLines off; toggleShowStates on; toggleAutoWCharNames off; toggleAutoTaxonNames off; toggleShowDefaultCharNames off; toggleConstrainCW on; toggleBirdsEye off; toggleShowPaleGrid off; toggleShowPaleCellColors off; togglePaleInapplicable on; toggleShowBoldCellText off; toggleAllowAutosize off; toggleColorsPanel off; toggleLinkedScrolling on; toggleScrollLinkedTables off; endTell; getWindow; tell It; forceAutosize; endTell; hideWindow; getEmployee #mesquite.charMatrices.ColorCells.ColorCells; tell It; setColor Red; removeColor off; endTell; getEmployee #mesquite.categ.StateNamesStrip.StateNamesStrip; tell It; showStrip off; endTell; getEmployee #mesquite.charMatrices.AnnotPanel.AnnotPanel; tell It; togglePanel off; endTell; getEmployee #mesquite.charMatrices.CharReferenceStrip.CharReferenceStrip; tell It; showStrip off; endTell; getEmployee #mesquite.charMatrices.QuickKeySelector.QuickKeySelector; tell It; autotabOff; endTell; getEmployee #mesquite.charMatrices.SelSummaryStrip.SelSummaryStrip; tell It; showStrip off; endTell; getEmployee #mesquite.align.AlignToDropped.AlignToDropped; tell It; gapCosts 8 3 2 2; subCosts 10 5 10 10 10 5 5 10 10 10 5 10; endTell; getEmployee #mesquite.molec.ColorByAA.ColorByAA; tell It; emphasizeDegeneracy off; endTell; getEmployee #mesquite.molec.SequenceInfoEditor.SequenceInfoEditor; tell It; panelOpen false; endTell; endTell; endTell; endTell; end;