#NEXUS [written Fri Feb 21 00:12:45 JST 2014 by Mesquite version 2.75 (build 564) at Sotome-VAIO/192.168.100.36] BEGIN TAXA; TITLE Taxa; DIMENSIONS NTAX=28; TAXLABELS 'Aporpium hexagonoides_ML297' 'Auricularia_mesenterica' 'Auricularia polytricha_TUFC12920' 'Exidia glandulosa_TUFC34008' 'Exidiopsis_sp' 'Aporpium strigosum_WD1710' 'Heterochaete_delicata' 'Aporpium strigosum_WD680' 'Aporpium_caryae_WD2207' 'Protodaedalea foliace_WD548' 'Exidiopsis grisea_TUFC100049' 'Aporpium strigosum_TFM_F_27651' 'Basidiodendron_eyrei' 'Protodaedalea foliacea_E701' 'Aporpium strigosum_TUFC14542' 'Aporpium hexagonoides_TFM_F_27498' 'Aporpium caryae_Dai 3952' 'Aporpium caryae_Dai 4549' 'Aporpium strigosum_Wei5621' 'Aporpium strigosum_Wei5990' 'Aporpium dimidiata_O18238' 'Aporpium dimidiata_O18261' 'Protodaedalea foliacea_Yuan5691' 'Aporpium hexagonoides_Wei5584' 'Aporpium hexagonoides_Wei5680' 'Aporpium_efibulata' 'Aporpium strigosum_TUFC10589' 'Tremella_foliacea' ; END; BEGIN CHARACTERS; TITLE Character_Matrix; DIMENSIONS NCHAR=957; FORMAT DATATYPE = DNA INTERLEAVE GAP = - MISSING = ?; MATRIX 'Aporpium hexagonoides_ML297' tttgaaatctggcggtctcaggccgtccgagttgtaatctagagaggtgctttccgtgccggaccgcgtacaagtcccttggaacagggcgtcatagagg 'Auricularia_mesenterica' tttgaaatctggcggtctaaggccgtccgagttgtaatctagagaggtgttttccgtgccggaccgtgtacaagtcccttggaacagggcgtcgtagagg 'Auricularia polytricha_TUFC12920' -tttgaatctggcggtctcaggccgtccgagttgtaatctagagaggtgttttccgtgccggaccgtgtacaagtcccttggaacagggcgtcatagagg 'Exidia glandulosa_TUFC34008' -tttgaatctggcggtctcaggccgtccgagttgtaatctagagaggtgttttccgtgccggaccgtgtacaagtcccttggaacagggcgtcatagagg 'Exidiopsis_sp' -tttgaatctggcggtctacggccgtccgagttgtaatctatagaggtgttttccgtgccggaccgtgtacaagtcccttggaacagggcgtcatagagg 'Aporpium strigosum_WD1710' tttgaaatctggcggtctcaggccgtccgagttgtaatctagagaggtgttttccgtgccggaccgcgtacaagtcccttggaacagggcgtcatagagg 'Heterochaete_delicata' tttaaaatctggcggtctacggccgtccgagttgtaatctagagaggtgttttccgtgccggaccgtgtacaagtcccttggaacagggcgtcatagagg 'Aporpium strigosum_WD680' tttgaaatctggcggtctcaggccgtccgagttgtaatctagagaggtgttttccgtgccggaccgcgtacaagtcccttggaacagggcgtcatagagg 'Aporpium_caryae_WD2207' tttgaaatctggcggtctcaggccgtccgaattgtaatctagagaggtgttttccgtgccggaccgcgtacaagtcccttggaacagggcgtcatagagg 'Protodaedalea foliace_WD548' tttgaaatctggcggtccaaggccgtccgagttgtaatctagagaagcgttttccgcgccggaccgtgtacaagtcccttggaacagggcgtcatagagg 'Exidiopsis grisea_TUFC100049' -tttgaatctggcggtctacggccgtccgagttgtaatctagagaggtgttttccgtgccggaccgtgtacaagtcccttggaacagggcgtcatagagg 'Aporpium strigosum_TFM_F_27651' tttgaaatctggcggtctcaggccgtccgagttgtaatctagagaggtgttttccgtgccggaccgcgtacaagtcccttggaacagggcgtcatagagg 'Basidiodendron_eyrei' tttgaaatctggcgcctcc--ggcgtccgagttgtaatctggagaggcatcgtccgcggcggacctcgtacaagtcctttgggatgaggcgtcatagagg 'Protodaedalea foliacea_E701' tttgaaatctggcggcccaaggccgtccgagttgtaatctagagaagcgttttccgcgccggaccgtgtacaagtcccttggaacagggcgtcatagagg 'Aporpium strigosum_TUFC14542' tttgaaatctggcggtctcaggccgtccgagttgtaatctagagaggcgttttccgtgccggaccgcgtacaagtcccttggaacagggcgtcatagagg 'Aporpium hexagonoides_TFM_F_27498' tttgaaatctggcggtctcaggccgtccgagttgtaatctagagaggtgttttccgtgccggaccgcgtacaagtcccttggaacagggcgtcatagagg 'Aporpium caryae_Dai 3952' tttgaaatctggcggtctcaggccgtccgagttgtaatctagagaggtgttttccgtgccggaccgcgtacaagtcccttggaacagggcgtcatagagg 'Aporpium caryae_Dai 4549' tttgaaatctggcggtctcaggccgtccgagttgtaatctagagaggtgttttccgtgccggaccgcgtacaagtcccttggaacagggcgtcatagagg 'Aporpium strigosum_Wei5621' tttgaaatctggcggtctcaggccgtccgagttgtaatctagagaggtgttttccgtgccggaccgcgtacaagtcccttggaacagggcgtcatagagg 'Aporpium strigosum_Wei5990' tttgaaatctggcggtctcaggccgtccgagttgtaatctagagaggtgttttccgtgccggaccgcgtacaagtcccttggaacagggcgtcatagagg 'Aporpium dimidiata_O18238' tttgaaatctggcggtctcaggccgtccgagttgtaatctagagaggtgttttccgcgccggaccgcgtacaagtcccttggaacagggcgtcatagagg 'Aporpium dimidiata_O18261' tttgaaatctggcggtctcaggccgtccgagttgtaatctagagaggtgttttccgtgccggaccgcgtacaagtcccttggaacagggcgtcatagagg 'Protodaedalea foliacea_Yuan5691' tttgaaatctggcggtcccaggccgtccgagttgtaatctagagaagcgttttccgcgccggaccgtgtacaagtcccttggaacagggcgtcatagagg 'Aporpium hexagonoides_Wei5584' tttgaaatctggcggtctcaggccgtccgagttgtaatctagagaggtgttttccgtgccggaccgcgtacaagtcccttggaacagggcgtcatagagg 'Aporpium hexagonoides_Wei5680' tttgaaatctggcggtctcaggccgtccgagttgtaatctagagaggtgttttccgtgccggaccgcgtacaagtcccttggaacagggcgtcatagagg 'Aporpium_efibulata' tttgaaatctggcggtctcaggccgtccgagttgtaatctagagaggtgttttccgtgccggaccgcgtacaagtcccttggaacagggcgtcgtagagg 'Aporpium strigosum_TUFC10589' tttgaaatctggcggtctcaggccgtccgagttgtaatctagagaggtgttttccgtgccggaccgcgtacaagtcccttggaacagggcgtcatagagg 'Tremella_foliacea' tttgaaatctggcgtcctccgggcgtcagagttgtaatctacagaggcgttttccgcgccggtccgtgtccaattcccttggaacagggtatcaaagagg 'Aporpium hexagonoides_ML297' gtgagaatcccgtccgtgacgcgga-cttccggtgctctgtgatacaccttcgaagagtcgagttgtttgggaatgcagctcaaaatgggtggtaaattc 'Auricularia_mesenterica' gtgagaatcccgtccatgacacgga-ctaccggtgctctgtgatacaccttcaaagagtcgagttgtttgggaatgcagctcaaaacgggtggtaaattc 'Auricularia polytricha_TUFC12920' gtgagaatcccgtccatgacacgga-ctaccggtgctctgtgatacaccttcaaagagtcgagttgtttgggaatgcagctcaaaatgggtggtaaattc 'Exidia glandulosa_TUFC34008' gtgagaatcccgtccatgacacgga-ctcccggtgctctgtgatacaccttcaaagagtcgagttgtttgggaatgcagctcaaaatgggtggtaaattc 'Exidiopsis_sp' gtgagaatcccgtccatgacacgga-ctcccggtgctctgtgatacaccttc?aagagtcgagttgtttgggaatgcagctcaaaatgggtggtaaattc 'Aporpium strigosum_WD1710' gtgagaatcccgtccgtgacgcgga-cttccggtgctctgcgatacaccttcaaagagtcgagttgtttgggaatgcagctcaaaatgggtggtaaattc 'Heterochaete_delicata' gtgagaatcccgtccatgacacgga-ctcccggtgcactgtgatacgccttcgaagagtcgagttgtttgggaatgcagctcaaaatgggtggtaaattc 'Aporpium strigosum_WD680' gtgagaatcccgtccgtgacgcgga-cttccggtgctctgtgatacaccttcaaagagtcgagttgtttgggaatgcagctcaaaatgggtggtaaattc 'Aporpium_caryae_WD2207' gtgagaatcccgtccgtgacgcgga-ctaccggtgctctgtgatacaccttcaaagagtcgagttgtttgggaatgcagctcaaaatgggtggtaaattc 'Protodaedalea foliace_WD548' gtgagaatcccgtccgtgacacgga-cccccggcgcactgcgatacgctttcgaagagtcgagttgtttgggaatgcagctcaaaacgggtggtaaattc 'Exidiopsis grisea_TUFC100049' gtgagaatcccgtccatgacacgga-ctcccggtgctctgtgatacaccttcaaagagtcgagttgtttgggaatgcagctcaaaatgggtggtaaattc 'Aporpium strigosum_TFM_F_27651' gtgagaatcccgtccgtgacgcgga-cttccggtgctctgtgatacaccttcaaagagtcgagttgtttgggaatgcagctcaaaatgggtggtaaattc 'Basidiodendron_eyrei' gtgagaatcccgtacgtgacgagga-ctaccgtcgctttgtgtcgtgccctcgaagagtcgagttgtttgggaatgcagctcaaaatgggaggtaaattc 'Protodaedalea foliacea_E701' gtgagaatcccgtccgtgacacgga-cccccggcgcactgcgatacgctttcgaagagtcgagttgtttgggaatgcagctcataacgggtggtaaattc 'Aporpium strigosum_TUFC14542' gtgagaatcccgtccgtgacgcgga-cttccggtgctctgtgatacaccttcaaagagtcgagttgtttgggaatgcagctcaaaatgggtggtaaattc 'Aporpium hexagonoides_TFM_F_27498' gtgagaatcccgtccgtgacgcgga-cttccggtgctctgtgataccccttcgaagagtcgagttgtttgggaatgccgctcaaaatgggtggtaaattc 'Aporpium caryae_Dai 3952' gtgagaatcccgtccgtgacgcgga-ctaccggtgctctgtgatacaccttcaaagagtcgagttgtttgggaatgcagctcaaaatgggtggtaaattc 'Aporpium caryae_Dai 4549' gtgagaatcccgtccgtgacgcgga-ctaccggtgctctgtgatacaccttcaaagagtcgagttgtttgggaatgcagctcaaaatgggtggtaaattc 'Aporpium strigosum_Wei5621' gtgagaatcccgtccgtgacgcgga-cttccggtgctctgtgatacaccttcaaagagtcgagttgtttgggaatgcagctcaaaatgggtggtaaattc 'Aporpium strigosum_Wei5990' gtgagaatcccgtccgtgacgcgga-cttccggtgctctgtgatacaccttcaaagagtcgagttgtttgggaatgcagctcaaaatgggtggtaaattc 'Aporpium dimidiata_O18238' gtgagaatcccgtccgtgacgcgga-ctcccggtgctctgcgatacgccttcgaagagtcgagttgtttgggaatgcagctcaaaatgggtggtaaattc 'Aporpium dimidiata_O18261' gtgagaatcccgtccgtgacgcgga-ctcccggtgctctgcgatacgccttcgaagagtcgagttgtttgggaatgcagctcaaaatgggtggtaaattc 'Protodaedalea foliacea_Yuan5691' gtgagaatcccgtccgtgacacggaccccccggcgcactgcgatacgctttcgaagagtcgagttgtttgggaatgcagctcaaaacgggtggtaaattc 'Aporpium hexagonoides_Wei5584' gtgagaatcccgtccgtgacgcgga-cttccggtgctctgtgatacaccttcgaagagtcgagttgtttgggaatgcagctcaaaatgggtggtaaattc 'Aporpium hexagonoides_Wei5680' gtgagaatcccgtccgtgacgcgga-cttccggtgctctgtgatacaccttcgaagagtcgagttgtttgggaatgcagctcaaaatgggtggtaaattc 'Aporpium_efibulata' gtgagaatcccgtccgtgacgcgga-ctcccggtgctctgcgatacaccttcgaagagtcgagttgtttgggaatgcagctcaaaacgggtggtaaattc 'Aporpium strigosum_TUFC10589' gtgagaatcccgtccgtgacgcgga-cttccggtgctctgtgatacaccttcaaagagtcgagttgtttgggaatgcagctcaaaatgggtggtaaattc 'Tremella_foliacea' gtgacaatcccgtacttgacac-ga-ccgccggtgctttgtgatacgtcttctaagagtcgagttgtttgggaatgcagctcaaaacgggtggtaaattc 'Aporpium hexagonoides_ML297' catctaaagctaaatacaggcgagagaccgatagcgaacaagtaccgtgagggaaagatgaaaagaactttggaaagagagttaaacagtacgtgaaatt 'Auricularia_mesenterica' catctaaagctaaatacaggcgagagaccgatagcgaacaagtaccgtgagggaaagatgaaaagaactttggaaagagagttaaacagtacgtgaaatt 'Auricularia polytricha_TUFC12920' catctaaagctaaatacaggcgagagaccgatagcgaacaagtaccgtgagggaaagatgaaaagaactttggaaagagagttaaacagtacgtgaaatt 'Exidia glandulosa_TUFC34008' catctaaagctaaatacaggcgagagaccgatagcgaacaagtaccgtgagggaaagatgaaaagaactttggaaagagagttaaacagtacgtgaaatt 'Exidiopsis_sp' catctaaagctaaatacaggcgagagaccgatagcgaacaagtaccgtgagggaaagatgaaaagaactttggaaagagagttaaacagtacgtgaaatt 'Aporpium strigosum_WD1710' catctaaagctaaatacaggcgagagaccgatagcgaacaagtaccgtgagggaaagatgaaaagaactttggaaagagagttaaacagtacgtgaaatt 'Heterochaete_delicata' catctaaagctaaatacaggcgagagaccgatagcgaacaagtaccgtgagggaaagatgaaaagaactttggaaagagagttaaacagtacgtgaaatt 'Aporpium strigosum_WD680' catctaaagctaaatacaggcgagagaccgatagcgaacaagtaccgtgagggaaagatgaaaagaactttggaaagagagttaaacagtacgtgaaatt 'Aporpium_caryae_WD2207' catctaaagctaaatacaggcgagagaccgatagcgaacaagtaccgtgagggaaagatgaaaagaactttggaaagagagttaaacagtacgtgaaatt 'Protodaedalea foliace_WD548' catctaaagctaaatacaggcgagagaccgatagcgaacaagtaccgtgagggaaagatgaaaagaactttggaaagagagttaaacagtacgtgaaatt 'Exidiopsis grisea_TUFC100049' catctaaagctaaatacaggcgagagaccgatagcgaacaagtaccgtgagggaaagatgaaaagaactttggaaagagagttaaacagtacgtgaaatt 'Aporpium strigosum_TFM_F_27651' catctaaagctaaatacaggcgagagaccgatagcgaacaagtaccgtgagggaaagatgaaaagaactttggaaagagagttaaacagtacgtgaaatt 'Basidiodendron_eyrei' cttctaaagctaaatattggcgagagaccgatagcgaacaagtaccgtgagggaaagatgaaaagaactttggaaagagagttaaacagtacgtgaaatt 'Protodaedalea foliacea_E701' catctaaagctaaatacaggcgagagaccgatagcgaacaagtaccgtgagggaaagatgaaaagaactttggaaagagagttaaacagtacgtgaaatt 'Aporpium strigosum_TUFC14542' catctaaagctaaatacaggcgagagaccgatagcgaacaagtaccgtgagggaaagatgaaaagaactttggaaagagagttaaacagtacgtgaaatt 'Aporpium hexagonoides_TFM_F_27498' catctaaagctaaatacaggcgagagaccgatagcgaacaagtaccgtgagggaaagatgaaaagaactttggaaagagagttaaacagtacgtgaaatt 'Aporpium caryae_Dai 3952' catctaaagctaaatacaggcgagagaccgatagcgaacaagtaccgtgagggaaagatgaaaagaactttggaaagagagttaaacagtacgtgaaatt 'Aporpium caryae_Dai 4549' catctaaagctaaatacaggcgagagaccgatagcgaacaagtaccgtgagggaaagatgaaaagaactttggaaagagagttaaacagtacgtgaaatt 'Aporpium strigosum_Wei5621' catctaaagctaaatacaggcgagagaccgatagcgaacaagtaccgtgagggaaagatgaaaagaactttggaaagagagttaaacagtacgtgaaatt 'Aporpium strigosum_Wei5990' catctaaagctaaatacaggcgagagaccgatagcgaacaagtaccgtgagggaaagatgaaaagaactttggaaagagagttaaacagtacgtgaaatt 'Aporpium dimidiata_O18238' catctaaagctaaatattggcgagagaccgatagcgaacaagtaccgtgagggaaagatgaaaagaactttggaaagagagttaaacagtacgtgaaatt 'Aporpium dimidiata_O18261' catctaaagctaaatattggcgagagaccgatagcgaacaagtaccgtgagggaaagatgaaaagaactttggaaagagagttaaacagtacgtgaaatt 'Protodaedalea foliacea_Yuan5691' catctaaagctaaatacaggcgagagaccgatagcgaacaagtaccgtgagggaaagatgaaaagaactttggaaagagagttaaacagtacgtgaaatt 'Aporpium hexagonoides_Wei5584' catctaaagctaaatacaggcgagagaccgatagcgaacaagtaccgtgagggaaagatgaaaagaactttggaaagagagttaaacagtacgtgaaatt 'Aporpium hexagonoides_Wei5680' catctaaagctaaatacaggcgagagaccgatagcgaacaagtaccgtgagggaaagatgaaaagaactttggaaagagagttaaacagtacgtgaaatt 'Aporpium_efibulata' catctaaagctaaatacgggcgagagaccgatagcgaacaagtaccgtgagggaaagatgaaaagaactttggaaagagagttaaacagtacgtgaaatt 'Aporpium strigosum_TUFC10589' catctaaagctaaatacaggcgagagaccgatagcgaacaagtaccgtgagggaaagatgaaaagaactttggaaagagagttaaacagtacgtgaaatt 'Tremella_foliacea' catctaaggctaaatattggcgagagaccgatagcgaacaagtaccgtgagggaaagatgaaaagcactttggaaagagagttaaacagtacgtgaaatt 'Aporpium hexagonoides_ML297' gttgaaagggaaacgcttgaagtcagtcgcgtctgccgggactcaaccttgcttctgcttggtgcaattctcggtagatgggccagcatcgattttggtc 'Auricularia_mesenterica' gttgaaagggaaacgcttgaagtcagtcgcgtccgccgggactcagccttgcttctgcttggtgcacttctcggtggatgggccagcatcgattttggcc 'Auricularia polytricha_TUFC12920' gttgaaagggaaacgcttgaagtcagtcgcgtctgccaggactcagccttgcttctgcttggtgcacttcttggtggatgggccagcatcgattttgatt 'Exidia glandulosa_TUFC34008' gttgaaagggaaacgcttgaagtcagtcgcgtctgccgggactcagccttgcttttgcttggtgcacttctcggtggatgggccagcatcgattttgatc 'Exidiopsis_sp' gttgaaagggaaacgcttgaagtcagtcgcgtttgccgggactcagctttgcttttgcttggtgcacttcccggtggatgggccagcatcgattttggtc 'Aporpium strigosum_WD1710' gttgaaagggaaacgcttgaagtcagtcgcgtctgccgggactcagccttgcttctgcttggtgcacttcccggtagatgggccagcgtcgattttggtc 'Heterochaete_delicata' gttgaaagggaaacgcttgaagtcagtcgcgtccgcagggactcagccttgcttttgcttggtgtacttctctgtggatgggccagcatcgattttagtc 'Aporpium strigosum_WD680' gttgaaagggaaacgcttgaagtcagtcgcgtctgccgggactcagccttgcttctgcttggtgcacttcccggtagatgggccagcgtcgattttggtc 'Aporpium_caryae_WD2207' gttgaaagggaaacgcttgaagtcagtcgcgtctgtcgggactcagccttgcttctgcttggtgcacttctcggtagatgggccagcatcaattttggtt 'Protodaedalea foliace_WD548' gttgaaagggaaacgcttgaagtcagtcgcgtccgccgggactcagcctcgcttttgctgggtgcacttctcggcggacgggccagcatcgatttcggtc 'Exidiopsis grisea_TUFC100049' gttgaaagggaaacgcttgaagtcagtcgcgtctgtcaggactcagccttgcttttgcttggtgcacttcctggtggatgggccagcatcgattttgatc 'Aporpium strigosum_TFM_F_27651' gttgaaagggaaacgcttgaagtcagtcgcgtctgccgggactcagccttgcttctgcttggtgcacttcccggtagatgggccagcgtcgattttggtc 'Basidiodendron_eyrei' gctcatagggaaacgcttgaagtcagtcgtctcggctgggactcagcccgggttctcctgggtgcacttcctagtcgaggggccagcgtcagtttcgagc 'Protodaedalea foliacea_E701' gttgaaagggaaacgcttgaagtcagtcgcgtccgccgggactcagccttgcttttgctgggtgcacttctcggcggacgggccagcatcgacttcggtc 'Aporpium strigosum_TUFC14542' gttgaaagggaaacgcttgaagtcagtcgcgtctgccgggactcagccttgcttctgcttggtgcacttcccggtagatgggccagcgtcgattttggtc 'Aporpium hexagonoides_TFM_F_27498' gttgaaagggaaacgcttgaagtcagtcgcgtctgcagggactcaaccttgcttctgcttggtgcaattctcggtagatgggccagcatcgattttggtc 'Aporpium caryae_Dai 3952' gttgaaagggaaacgcttgaagtcagtcgcgtctgtcgggactcagccttgcttctgcttggtgcacttctcggtagatgggccagcatcaattttggtt 'Aporpium caryae_Dai 4549' gttgaaagggaaacgcttgaagtcagtcgcgtctgtcgggactcagccttgcttctgcttggtgcacttctcggtagatgggccagcatcaattttggtt 'Aporpium strigosum_Wei5621' gttgaaagggaaacgcttgaagtcagtcgcgtctgccgggactcagccttgcttctgcttggtgcacttctcggtagatgggccagcatcgattttggtc 'Aporpium strigosum_Wei5990' gttgaaagggaaacgcttgaagtcagtcgcgtctgccgggactcagccttgcttctgcttggtgcacttctcggtagatgggccagcatcgattttggtc 'Aporpium dimidiata_O18238' gttgaaagggaaacgcttgaagtcagtcgcgtctgccgggactcagccttgcttctgcttggtgcacttctcggtagatgggccagcatcgattttggtt 'Aporpium dimidiata_O18261' gttgaaagggaaacgcttgaagtcagtcgcgtctgccgggactcagccttgcttctgcttggtgcacttctcggtagatgggccagcatcgattttggtt 'Protodaedalea foliacea_Yuan5691' gttgaaagggaaacgcttgaagtcagtcgcgtccgccgggactcaacctcgcttttgccgggtgcacttctcggcggacgggccagcatcgattttggtc 'Aporpium hexagonoides_Wei5584' gttgaaagggaaacgcttgaagtcagtcgcgtctgccgggactcaaccttgcttctgcttggtgcaattcttggtagatgggccagcatcgattttggtc 'Aporpium hexagonoides_Wei5680' gttgaaagggaaacgcttgaagtcagtcgcgtctgccgggactcaaccttgcttctgcttggtgcaattcttggtagatgggccagcatcgattttggtc 'Aporpium_efibulata' gttgaaagggaaacgcttgaagtcagtcgcgtctgccgggactcagccttgcttctgcttggtgcacttctcggtagatgggccagcatcgattttggtc 'Aporpium strigosum_TUFC10589' gttgaaagggaaacgcttgaagtcagtcgcgtctgccgggactcagccttgcttctgcttggtgcacttctcggtagatgggccagcatcgattttggtc 'Tremella_foliacea' gttgaaagggaaacgattgaagtcagtcgtgtccg-aggggttcagccggtcct---gccggtgcattcctc-tcggacgggtcaacatcggttttgtcc 'Aporpium hexagonoides_ML297' gccggaaaagggtgagagg-aatgtggcagc----ttgctgtgttatagcctcttatcgtacacggtgactgggatcgaggac?????acagctgtgcgc 'Auricularia_mesenterica' gccggaaaagggcgggagg-aatgtggcagct-ttttgctgtgttatagcctcccgtcgtacacggtggccgggatcgaggaa?????tcagctgtgcgc 'Auricularia polytricha_TUFC12920' gccggaaaagggcgggagg-aatgtggcagc--ttttgctgtgttatagccttctgtcgtacacggtggttgggatcgaggac?????tcagctgtgcgc 'Exidia glandulosa_TUFC34008' gccggaaaagggtgggagg-aatgtggcagc----ttgctgtgttatagcctcctatcgtacacggtggttgggatcgaggat?????tcagctgtgcgc 'Exidiopsis_sp' gccggagaagggtgggagg-aatgtggcagc----ttgctgtgttatagcctcctatcgtacacggtgattgggatcgaggac?????tcggctgtgcgc 'Aporpium strigosum_WD1710' gccggaaaagggtgggagg-aatgtggcagc----tcgctgtgttatagccttctatcgtacacggtgactgggatcgaggac?????gcagctgtgcgc 'Heterochaete_delicata' gccggaaaagggcgggagg-aatgtggcagc----ttgctgtgttatagcctctcgtcgtacacggtggccgggatcgaggac?????tcagctgtgcgc 'Aporpium strigosum_WD680' gccggaaaagggtgggagg-aatgtggcagc----ttgctgtgttatagccttctatcgtacacggtgactgggatcgaggac?????gcagctgtgcgc 'Aporpium_caryae_WD2207' gccggaaaagggtgggagg-aatgtggcagc----ttgctgtgttatagcctcctatcgtacacggtgactgggattgaggac?????ccagctgtgcgc 'Protodaedalea foliace_WD548' gccggaaaaggacgggaggaaatgtggcagc--tttggctgtgttatagactctcgtcgcacacggtggccgggatcgaggac?????tcggctgtgcgt 'Exidiopsis grisea_TUFC100049' gccggagaagggtgggagg-aatgtggcagc----ttgctgtgttatagcctcctatcgtacacggtgattgggatcgaggac?????tcggctgtgcgc 'Aporpium strigosum_TFM_F_27651' gccggaaaagggtgggagg-aatgtggcagc----ttgctgtgttatagccttctatcgtacacggtgactgggatcgaggac?????gcagctgtgcgc 'Basidiodendron_eyrei' gcggaagaagggcgtgagg-aatgtggcacc--ctcgggtgtgttatagcctcgcgtcggacgccgtgcttgggactgaggac?????ctcgctgtgcgg 'Protodaedalea foliacea_E701' gccggaaaaggacgggagggaatgtggcagct-tttagctgtgttatagactctcgtcgcacacggtggctgggatcgaggac?????tcggcagtgcgt 'Aporpium strigosum_TUFC14542' gccggaaaagggtgggagg-aatgtggcagc----ttgctgtgttatagccttctatcgtacacggtgactgggatcgaggac?????gcagctgtgcgc 'Aporpium hexagonoides_TFM_F_27498' gccggaaaagggtgagagg-aatgtggcagc----ttgctgtgttatagcctcttatcgtacacggtgactgggatcgaggac?????acagctgtgcgc 'Aporpium caryae_Dai 3952' gccggaaaagggtgggagg-aatgtggcagc----ttgctgtgttatagcctcctatcgtacacggtgactgggattgaggac?????ccagctgtgcgc 'Aporpium caryae_Dai 4549' gccggaaaagggtgggagg-aatgtggcagc----ttgctgtgttatagcctcctatcgtacacggtgactgggattgaggac?????ccagctgtgcgc 'Aporpium strigosum_Wei5621' gccggaaaagggtgggagg-aatgtggcagc----ttgctgtgttatagccttctatcgtacacggtgactgggatcgaggac?????gcagctgtgcgc 'Aporpium strigosum_Wei5990' gccggaaaagggtgggRgg-aatgtggcagc----ttgctgtgttatagccttctatcgtacacggtgactgggatcgaggac?????gcagctgtgcgc 'Aporpium dimidiata_O18238' gccggaaaagggcgggagg-aatgtggcagc----ttgctgtgttatagcctctcgtcgtacacggtgactgggatcgaggac?????tcagctgtgcgc 'Aporpium dimidiata_O18261' gccggaaaagggcgggagg-aatgtggcagc----ttgctgtgttatagcctctcgtcgtacacggtgactgggatcgaggac?????tcagctgtgcgc 'Protodaedalea foliacea_Yuan5691' gccggaaaaggacgggagg-aatgtggcagctttttagttgtgttatagactctcgttgtacacggtggccgggatcgaggac?????tcggctgtgcgc 'Aporpium hexagonoides_Wei5584' gccggaaaagggtgagagg-aatgtggcagc----ttgctgtgttatagcctcttatcgtacacggtgactgggatcgaggac?????acagctgtgcgc 'Aporpium hexagonoides_Wei5680' gccggaaaagggtgagagg-aatgtggcagc----ttgctgtgttatagcctcttatcgtacacggtgactgggatcgaggac?????acagctgtgcgc 'Aporpium_efibulata' gtcggaaaagggcgggagg-aatgtggcagc----ttgctgtgttatagcctctcgtcgtacacgatgactgggatcgaggac?????tcagctgtgcgc 'Aporpium strigosum_TUFC10589' gccggaaaagggtgggagg-aatgtggcagc----ttgctgtgttatagccttctatcgtacacggtgactgggatcgaggac?????gcagctgtgcgc 'Tremella_foliacea' ggcggaaaagggcgtgagg-aatgtggcacc--tccgggtgtgttatagccttgcgtcgcatacgtcggtcgagaccgaggaa?????cctgcggaagga 'Aporpium hexagonoides_ML297' -ttct-----cgctgcacgccgtgtgaaat-cctttctcacacctgtgaacgcattcgg----gggtcgctgt-gaagcgcttccgccttaaaaacatac 'Auricularia_mesenterica' -ttt------ggctgcacgctgtcgaac------aactcacacctgtgcaccttttcggttgcggcctgc----cggtcgcttccgctt----tacatgc 'Auricularia polytricha_TUFC12920' -ccttcaccgggctgcacgctggagcaa-----gaccccacacctgtgcaccttttcggttgcggctt------cggtcgctgccgcttt---caaatgc 'Exidia glandulosa_TUFC34008' -ttc------ggctgcacgctgtcgaaa-----cctctcacacctgtgcaccttttcggttgcggcgttc----gcgtcgcttccgctt--tacacattt 'Exidiopsis_sp' -ttc------ggctgcacgccgttggatta----ccttcacacctgtgcaccccttcggtcgcggcgctttgcggcgtcgcttccgctt----cacatac 'Aporpium strigosum_WD1710' -tctt---tgggccgcacgccgcgtgatacacaaccctcgcacctgtgaacgtatcggg----ggcgcgt-----aagcgcttctgcct--gaaacattt 'Heterochaete_delicata' -tcc------ggctgcacgctgtcgaac------tacacacacctgtgcaccttatcggtttcggcctca----ccgccgtcgccgctt----tacatct 'Aporpium strigosum_WD680' -tctt---tgggccgcacgctgtgcgatacacaaccctcacacctgtgaacgtatcggg----ggcgcgt-----aagcgcttctgcct--gaaacattt 'Aporpium_caryae_WD2207' -ttc------ggctgcacgctggagaaatccaaccttccacacctgtgaacctttcggg----ggcgct------ctgcgcttccgctt----tacatgt 'Protodaedalea foliace_WD548' cctc------tctcgcacgccgttccgaat----atctcaccaccgtgaacgtctcggg----ggtgtta---------gccctcgctc---ttacttgt 'Exidiopsis grisea_TUFC100049' -tcc------cgctgcacgccgttggatta----ccttcacacctgtgcaccttctcggttgcggcgctttgcggcgtcgcttccgctt----cacatat 'Aporpium strigosum_TFM_F_27651' -tctt---tgggctgcacgctgcgtgatacacaaccctcgcacctgtgaacgtatcggg----ggcgcgt-----aagcgcttctgcct--gaaacattt 'Basidiodendron_eyrei' -ctt------cggcctgcacgcttggaa------tccacacacctgtgcacttcgttcg-------------gggaaacctgatcgcca----cacttac 'Protodaedalea foliacea_E701' -ctc------tctcgcacgccgttccgaat------atcacccctgtgaacgtctcggg----ggtttac---------gcccccgctt----tacgtgt 'Aporpium strigosum_TUFC14542' -tctt---tgggctgcacgctgcgtgatacacaaccctcacacctgtgaacgtatcggg----ggcgcgt-----aagcgcttctgcct--aaaacattt 'Aporpium hexagonoides_TFM_F_27498' -ttct-----cgctgcacgccgtgtgaaat-cctttctcacacctgtgaacgcattcgg----gggtcgctgt-gaagcgcttccgccttaaaaacatac 'Aporpium caryae_Dai 3952' -ttc------ggctgcacgctgttgaaatccaa-ccttcacacctgtgaacctttcggg----ggcgct------ctgcgcttccgctt----tacatgt 'Aporpium caryae_Dai 4549' -ttc------ggctgcacgctgttgaaatccaa-ccttcacacctgtgaacctttcggg----ggcgct------ctgcgcttccgctt----tacatgt 'Aporpium strigosum_Wei5621' -tctt---tgggctgcacgctgtgYgatacacaaccctcacacctgtgaacgtatcggg----ggcgcgt-----aagcgcttctgccc--aaaacattt 'Aporpium strigosum_Wei5990' -Yctt---tgggctgcacgctgtgtgatacacaaccctcacacctgtgaacgtatcggg----ggcgcgt-----aagcgcttctgccc--aaaacattt 'Aporpium dimidiata_O18238' -ttc------ggctgcacgctgtcggataa-aatctctcacacctgtgaacatttcggg----ggcgctt----cttgcgcttccgctt----tacatg- 'Aporpium dimidiata_O18261' -ttc------ggctgcacgctgtcggataa-aatctctcacacctgtgaacatttcggg----ggcgctt----cttgcgcttccgctt----tacatg- 'Protodaedalea foliacea_Yuan5691' -ctc----------gcacgccgttccgaat----atcccaccaccgtgaacgtctcggg----ggtttac--------gtcccccgctt----tacttgt 'Aporpium hexagonoides_Wei5584' -ttcK-----cgctgcacgccgtgtgaaat-cctttctcacacctgtgaacgcattcgg----gggtcgctgt-gaagcgcttccgctt-aaacacatac 'Aporpium hexagonoides_Wei5680' -ttct-----cgctgcacgccgtgtgaaat-cctttctcacacctgtgaacgcattcgg----gggtcgctgt-gaagcgcttccgctt-aaacacatac 'Aporpium_efibulata' -ttc------ggctgcacgctgttggataa-aatctctcacacctgtgaacctttcggg----ggcgctt-----ttgcgctttcgctt----tacatg- 'Aporpium strigosum_TUFC10589' -tctt---tgggctgcacgctgtgtgatacacaaccctcacacctgtgaacgtatcggg----ggcgtgt-----aagcgcttctgccc--aaaacattt 'Tremella_foliacea' ---------tcattagagatgccgaaaggc-ttatccaaacacctgtgcacatcggacc--gcgccccctcccgggggccgggccgcct---tcacaca- 'Aporpium hexagonoides_ML297' aaccac-ttatgttcagaatgt----ta-aaaactataacaagta--acaactttcaacaacggatctcttggctctcgcatcgatgaagaacgcagcga 'Auricularia_mesenterica' aaccacgatcggtctagaatgt--gtat-aaaactat-aaaagta--acaactttcaacaacggatctcttggctctcgcatcgatgaagaacgcagcga 'Auricularia polytricha_TUFC12920' aacaac-tcaagtctcgaatgt--taac-aaaaccataaaaagta--acaactttcaacaacggatctcttggctctcgcatcgatgaagaacgcagcga 'Exidia glandulosa_TUFC34008' tactac-aaaagtccagaatgt------caaaactat-aaacataatacaactttcaacaacggatctcttggctctcgcatcgatgaagaacgcagcga 'Exidiopsis_sp' aactac-a?aagtccagaatgt----aa-taaac?tt-aaacata--acaactttcaacaacggatctcttggctctcgcatcgatgaagaacgcagcga 'Aporpium strigosum_WD1710' aactac-ttatgttcagaatgtaaaaaa-aaaactataacaaata--acaactttcaacaacggatctcttggctctcgcatcgatgaagaacgcagcga 'Heterochaete_delicata' tacaac-gtcagttcagaatgt------ttaaactat-aaaagta--acaactttcaacaacggatctcttggctctcgcatcgatgaagaacgcagcga 'Aporpium strigosum_WD680' aactac-ttatgttcagaatgtaaaaaa-aaaactataacgaata--acaactttcaacaacggatctcttggctctcgcatcgatgaagaacgcagcga 'Aporpium_caryae_WD2207' aacaac-ttaagtttagaatgt----tttaatactat--aaagta--acaactttcaacaacggatctcttggctctcgcatcgatgaagaacgcagcga 'Protodaedalea foliace_WD548' aactac-ttttgtcgaggatgt----aa-actataat-aaaagta--acaactttcaacaacggatctcttggctctcgcatcgatgaagaacgcagcga 'Exidiopsis grisea_TUFC100049' aactac----agtctagaatgt----aa-taaacttt-aaacata--acaactttcaacaacggatctcttggctctcgcatcgatgaagaacgcagcga 'Aporpium strigosum_TFM_F_27651' aactac-ttatgttcagaatgt-aaaaa-aaaactataacaagta--acaactttcaacaacggatctcttggctctcgcatcgatgaagaacgcagcga 'Basidiodendron_eyrei' a------tcttgtctcgaatgt----ct-aatactat---acaat--acaactatgagcaacggatctcttggctctcgcatcgatgaagaacgcagcga 'Protodaedalea foliacea_E701' aactac-ttttgtcgaggatgt----aa-accataat-aaaagta--acaactttcaacaacggatctcttggctctcgcatcgatgaagaacgcagcga 'Aporpium strigosum_TUFC14542' aactac-ttatgttcagaatgt-aaaaa-aaaactataacgaata--acaactttcaacaacggatctcttggctctcgcatcgatgaagaacgcagcga 'Aporpium hexagonoides_TFM_F_27498' aaccac-ttatgttcagaatgt----ta-aaaactataacaagta--acaactttcaacaacggatctcttggctctcgcatcgatgaagaacgcagcga 'Aporpium caryae_Dai 3952' aacaac-ttaagtttagaatgt----tttaatactat--aaagta--acaactttcaacaacggatctcttggctctcgcatcgatgaagaacgcagcga 'Aporpium caryae_Dai 4549' aacaac-ttaagtttagaatgt----tttaatactat--aaagta--acaactttcaacaacggatctcttggctctcgcatcgatgaagaacgcagcga 'Aporpium strigosum_Wei5621' aactac-ttatgttcagaatgt----aa-aaaactataacaaata--acaactttcaacaacggatctcttggctctcgcatcgatgaagaacgcagcga 'Aporpium strigosum_Wei5990' aactac-ttatgttcagaatgt----aa-aaaactataacaaata--acaactttcaacaacggatctcttggctctcgcatcgatgaagaacgcagcga 'Aporpium dimidiata_O18238' --aaac-tccagtttagaatgt----aa-tatactat-aaaagta--acaactttcaacaacggatctcttggttctcgcatcgatgaagaacgcagcga 'Aporpium dimidiata_O18261' --aaac-tccagtttagaatgt----aa-tatactat-aaaagta--acaactttcaacaacggatctcttggttctcgcatcgatgaagaacgcagcga 'Protodaedalea foliacea_Yuan5691' aactac-ttttgtcgaggatgt----aa-accataataaaaagta--acaactttcaacaacggatctcttggctctcgcatcgatgaagaacgcagcga 'Aporpium hexagonoides_Wei5584' aaccac-ttatgttcagaatgt----ta-aaaactataacaagta--acaactttcaacaacggatctcttggctctcgcatcgatgaagaacgcagcga 'Aporpium hexagonoides_Wei5680' aaccac-ttatgttcagaatgt----ta-aaaactataacaagta--acaactttcaacaacggatctcttggctctcgcatcgatgaagaacgcagcga 'Aporpium_efibulata' --aaac-tccagtttagaatgt----aa-tatactat--aaagta--acaactttcaacaacggatctcttggttctcgcatcgatgaagaacgcagcga 'Aporpium strigosum_TUFC10589' aactac-ttatgttcagaatgt----aa-aaaactataacaaata--acaactttcaacaacggatctcttggctctcgcatcgatgaagaacgcagcga 'Tremella_foliacea' ---aac-gcatgtcacgaacgt----aa-tgcatcataacatgaa--acaactttcaacaacggatctcttggctctcgcatcgatgaagaacgcagcga 'Aporpium hexagonoides_ML297' aatgcgataagtaatgtgaattgcagaattcagtgaatcatcgaatctttgaacgcatcttgcgctctgtggtattccgcagagcatgcctgtttgagtg 'Auricularia_mesenterica' aatgcgataagtaatgtgaattgcagaattcagtgaatcatcgaatctttgaacgcatcttgcgctccttggtattccatggagcatgcctgtttgagtg 'Auricularia polytricha_TUFC12920' aatgcgataagtaatgtgaattgcagaattcagtgaatcatcgaatctttgaacgcatcttgcgctccttggtattccatggagcatgcctgtttgagtg 'Exidia glandulosa_TUFC34008' aatgcgataagtaatgtgaattgcagaattcagtgaatcatcgaatctttgaacgcaccttgcgctccatggtattccgtggagcatgcctgtttgagtg 'Exidiopsis_sp' aatgcgataagtaatgtgaattgcagaattcagtgaatcatcgaatctttgaacgcatcttgcgctccatggtattccgtggagcatgcctgtttgagtg 'Aporpium strigosum_WD1710' aatgcgataagtaatgtgaattgcagaattcagtgaatcatcgaatctttgaacgcaccttgcgctctgtggtattccgcaaagcatgcctgtttgagtg 'Heterochaete_delicata' aatgcgataagtaatgtgaattgcagaattcagtgaatcatcgaatctttgaacgcatcttgcgctccatggtattccgtggagcatgcctgttcgagtg 'Aporpium strigosum_WD680' aatgcgataagtaatgtgaattgcagaattcagtgaatcatcgaatctttgaacgcaccttgcgctctgtggtattccgcagagcatgcctgtttgagtg 'Aporpium_caryae_WD2207' aatgcgataagtaatgtgaattgcagaattcagtgaatcatcgaatctttgaacgcatcttgcgctccgtggtattccgcggagcatgcctgtttgagtg 'Protodaedalea foliace_WD548' aatgcgataagtaatgtgaattgcagaattcagtgaatcatcgaatctttgaacgcaccttgcgctccgtggtattccgcggagcatgcctgtttgagtg 'Exidiopsis grisea_TUFC100049' aatgcgataagtaatgtgaattgcagaattcagtgaatcatcgaatctttgaacgcatcttgcgctccatggtattccgtggagcatgcctgtttgagtg 'Aporpium strigosum_TFM_F_27651' aatgcgataagtaatgtgaattgcagaattcagtgaatcatcgaatctttgaacgcaccttgcgctctgtggtattccgcagagcatgcctgtttgagtg 'Basidiodendron_eyrei' aatgcgatacgtaatgtgaattgcagaattcagtgaatcatcgaatctttgaacgcaccttgcactccgtggtttaccacggagtacgcccgttcgagtg 'Protodaedalea foliacea_E701' aatgcgataagtaatgtgaattgcagaattcagtgaatcatcgaatctttgaacgcaccttgcgccccgtggtattccgcggagcatgcctgtttgagtg 'Aporpium strigosum_TUFC14542' aatgcgataagtaatgtgaattgcagaattcagtgaatcatcgaatctttgaacgcaccttgcgctctgtggtattccgcagagcatgcctgtttgagtg 'Aporpium hexagonoides_TFM_F_27498' aatgcgataagtaatgtgaattgcagaattcagtgaatcatcgaatctttgaacgcatcttgcgctctgtggtattccgcagagcatgcctgtttgagtg 'Aporpium caryae_Dai 3952' aatgcgataagtaatgtgaattgcagaattcagtgaatcatcgaatctttgaacgcatcttgcgctccgtggtattccgcggagcatgcctgtttgagtg 'Aporpium caryae_Dai 4549' aatgcgataagtaatgtgaattgcagaattcagtgaatcatcgaatctttgaacgcatcttgcgctccgtggtattccgcggagcatgcctgtttgagtg 'Aporpium strigosum_Wei5621' aatgcgataagtaatgtgaattgcagaattcagtgaatcatcgaatctttgaacgcaccttgcgctctgtggtattccgcagagcatgcctgtttgagtg 'Aporpium strigosum_Wei5990' aatgcgataagtaatgtgaattgcagaattcagtgaatcatcgaatctttgaacgcaccttgcgctctgtggtattccgcagagcatgcctgtttgagtg 'Aporpium dimidiata_O18238' aatgcgataagtaatgtgaattgcagaattcagtgaatcatcgaatctttgaacgcatcttgcgctctgtggtattccgcagagcgtgcctgtttgagtg 'Aporpium dimidiata_O18261' aatgcgataagtaatgtgaattgcagaattcagtgaatcatcgaatctttgaacgcatcttgcgctctgtggtattccgcagagcatgcctgtttgagtg 'Protodaedalea foliacea_Yuan5691' aatgcgataagtaatgtgaattgcagaattcagtgaatcatcgaatctttgaacgcaccttgcgctccgcggcattccgcggagcatgcctgtttgagcg 'Aporpium hexagonoides_Wei5584' aatgcgataagtaatgtgaattgcagaattcagtgaatcatcgaatctttgaacgcatcttgcgctctgtggtattccgcagagcatgcctgtttgagtg 'Aporpium hexagonoides_Wei5680' aatgcgataagtaatgtgaattgcagaattcagtgaatcatcgaatctttgaacgcatcttgcgctctgtggtattccgcagagcatgcctgtttgagtg 'Aporpium_efibulata' aatgcgataagtaatgtgaattgcagaattcagtgaatcatcgaatctttgaacgcatcttgcgctctgtggtattccgcagagcatgcctgtttgagtg 'Aporpium strigosum_TUFC10589' aatgcgataagtaatgtgaattgcagaattcagtgaatcatcgaatctttgaacgcaccttgcgctctgtggtattccgcagagcatgcctgtttgagtg 'Tremella_foliacea' aatgcgataagtaatgtgaattgcagaattcagtgaatcatcgaatctttgaacgcaccttgcgccttttggtattccgaaaggcatgcctgtttgagtg 'Aporpium hexagonoides_ML297' tcacgt-aaaccatcgcc-cttgggatt----tcgatctt-cttgtggtggacttggactg-tgccgtagta---ggctcgtcttgaaatgcattagctt 'Auricularia_mesenterica' tcacgt-aaaccctcacc-cttgcgatg----taacagtcgttcgcggtggacttggaccg-tgccgtagtt---ggctcgtcctgaaatgcattagctg 'Auricularia polytricha_TUFC12920' tcacgtaaaaccctcacc-cttgcgatg----taacagttgctcgcggtggacttggactg-tgccgtaacc---ggctcgtcttgaaatgcattagctg 'Exidia glandulosa_TUFC34008' tcacgt-caaccctcatt-catgtgatg----ttacagtc-gcatgaatggatttggaccg-tgtcgtaatc---gactcgtcccgaaatgcattagctt 'Exidiopsis_sp' tcacgt-caaccctcacc-ctcgtgatg----ttacagtc-tcgagagtggacttggaccg-tgccgtagct---ggctcgtcctgaaatgcattagctc 'Aporpium strigosum_WD1710' tcacgt-aaaccatcgcc-cttgggatt----tcgatctc-tatgaggtggacttggactgttgccgtagtc---ggctcgtcttgaaatgaattagctt 'Heterochaete_delicata' tcacgt-caaccctcaccgcttgcgatg----tcaaagt?gctcgaggtggatttggaccg-tgccgcgtctcgcggctcgtcttgaaatgcattagctt 'Aporpium strigosum_WD680' tcacgt-aaaccatcgcc-cttgggatt----tcgatctc-tatgaggtggacttggactgttgccgtagtc---ggctcgtctcgaaatgaattagctt 'Aporpium_caryae_WD2207' tcacgt--aaccatcgcc-cctcagatcgttaacgcggtctgtcgaggtggatttggactg-tgccgtagtt---ggctcgtcttgaaatacattagctt 'Protodaedalea foliace_WD548' tcacgt-gaaccctcgcc-ctcgagatt----tcg--atctcccgaggcggacttggactcttgccgtcgcc---ggctggtcctgaaatgcattagctt 'Exidiopsis grisea_TUFC100049' tcacgt-aaaccctcacc-ctcgtgatg----ttacaatc-tcgagagtggacttggaccg-tgccgtagtY---ggctcgtcctgaaatgcattagctc 'Aporpium strigosum_TFM_F_27651' tcacgt-aaaccatcgcc-cttgggatt----tcgatctc-tatgaggtggacttggactgttgccgtagtc---ggctcgtcttgaaatgaattagctt 'Basidiodendron_eyrei' tcacgt-taaccatcgca-aagggatct-----------ttctctgagcggatctgggtgt-tgccgtag----aggctcgcctt-aaatgcattagcg- 'Protodaedalea foliacea_E701' tcacgt-gaaccctcgcc-ctcgagatt----tcg--atctcccgaggcggacttggactcttgccgtcgcc---ggctggtcccgaaacgcattagctt 'Aporpium strigosum_TUFC14542' tcacgt-aaaccatcgcc-cttgggatt----tcgatctc-tacgaggtggacttggactgttgccgtagtc---ggctcgtcttgaaatgaattagctt 'Aporpium hexagonoides_TFM_F_27498' tcacgt-aaaccatcgcc-cttgggatt----tcgatctt-cttgtggtggacttggactg-tgccgtagta---ggctcgtcttgaaatgcattagctt 'Aporpium caryae_Dai 3952' tcacgt--aaccatcgcc-cctcagatcgttaacgcggtctgtcgaggtggatttggactg-tgccgtagtt---ggctcgtcttgaaatacattagctt 'Aporpium caryae_Dai 4549' tcacgt--aaccatcgcc-cctcagatcgttaacgcggtctgtcgaggtggatttggactg-tgccgtagtt---ggctcgtcttgaaatacattagctt 'Aporpium strigosum_Wei5621' tcacgt-aaaccatcgcc-cttgggatt----tcgatctc-tatgaggtggacttggactg-tgccgtagtc---ggctcgtcttgaaatgaattagctt 'Aporpium strigosum_Wei5990' tcacgt-aaaccatcgcc-cttgggatt----tcgatctc-tatgaggtggacttggactg-tgccgtagtc---ggctcgtcttgaaatgaattagctt 'Aporpium dimidiata_O18238' tcacgt-aaaccctcacc-ctggagatt----ttatgatctccagcggtggatttggaccg-tgccgtagtt---ggctcgtcctgaaatgcattagctt 'Aporpium dimidiata_O18261' tcacgt-aaaccctcacc-ctggagatt----ttacgatctccagcggtggatttggaccg-tgccgtagtt---ggctcgtcctgaaatgcattagctt 'Protodaedalea foliacea_Yuan5691' tcacgt-aaaccctcgcc-ctcgagatt---------------cgaggcggacttggactcttgccgtcgcc---ggctggtcccgaaacgcattagctt 'Aporpium hexagonoides_Wei5584' tcacgt-aaaccatcgcc-cttgggatt----tcgatctt-cttgtggtggacttggactg-tgccgtagta---ggctcgtcttgaaatgcattagctt 'Aporpium hexagonoides_Wei5680' tcacgt-aaaccatcgcc-cttgggatt----tcgatctt-cttgtggtggacttggactg-tgccgtagta---ggctcgtcttgaaatgcattagctt 'Aporpium_efibulata' tcacgt-aaaccctcgcc-cttgagatt----tcacgatctcctgaggtggatttggaccg-tgccgtagtt---ggctcgtcctgaaatgcattagctt 'Aporpium strigosum_TUFC10589' tcacgt-aaaccatcgcc-cttgggatt----tcgatctc-tatgaggtggacttggactg-tgccgtagtc---ggctcgtctcgaaatgaattagctt 'Tremella_foliacea' tcatgt-agactcaaccc-cccgggttt----ctg-acccggcggcgttggatttgggccc-tgcctttacc---ggctggcctt-aaatgcgttagtgg 'Aporpium hexagonoides_ML297' gtac--tctttag--agtgc--ccggcaccggtgtgataattatctgcgccaacgcc 'Auricularia_mesenterica' gcgc---ttttag--agtgc--tgggcgacggtgtgataattatctgcgccaatgcc 'Auricularia polytricha_TUFC12920' gcgc---ttttag--agtgc--tgggcgacggtgtgataattatctgcgccaatgcc 'Exidia glandulosa_TUFC34008' gcgc---ttttag--agtgc--tgggcaccggtgtgataattatctgcgccaacgcc 'Exidiopsis_sp' g?gc--tttttag--agtgcg-ggggcatcggtgtgataattatctgcgccaacgcc 'Aporpium strigosum_WD1710' gcgc--tctttag--agtgt--ccggcaccggtgtgataattatctgcgccaacgcc 'Heterochaete_delicata' gcgc--tttttag--agtgc--tcggcaccggtgtgataattatctgcgccaacgcc 'Aporpium strigosum_WD680' gcgc--tctttag--agtgt--ccggcaccggtgtgataattatctgcgccaacgcc 'Aporpium_caryae_WD2207' gcgc---ttttag--agtgc--cgggcaccggtgtgataattatctgcgccacagcc 'Protodaedalea foliace_WD548' ttgcgcctcttag--ggtgctttggtgaacggtgtgataattatctacgcttgaaac 'Exidiopsis grisea_TUFC100049' gtgc---ttttag--agtgc--ggggcataggtgtgataattatctgcgccgacgcc 'Aporpium strigosum_TFM_F_27651' gcgc--cctttag--agtgt--ccggcaccggtgtgataattatctgcgccaacgcc 'Basidiodendron_eyrei' --------------aaggtg--taaaccacggcgtgataatgtctcgtccttatggt 'Protodaedalea foliacea_E701' tcgcgcctcttag--ggtgcttcggtgaacggtgtgataattatctacgcttgaacc 'Aporpium strigosum_TUFC14542' gcgc--tctttag--agtgt--ccggcaccggtgtgataattatctgcgccaacgcc 'Aporpium hexagonoides_TFM_F_27498' gtac--tctttag--agtgc--ccggcaccggtgtgataattatctgcgccaacgcc 'Aporpium caryae_Dai 3952' gcgc---ttttgg--agtgc--cgggcaccggtgtgataattatctgcgccacagcc 'Aporpium caryae_Dai 4549' gcgc---ttttag--agtgc--cgggcaccggtgtgataattatctgcgccacagcc 'Aporpium strigosum_Wei5621' gcgc--tctttag--agtgt--ccggcaccggtgtgataattatctgcgccaacgcc 'Aporpium strigosum_Wei5990' gcgc--tctttag--agtgt--ccggcaccggtgtgataattatctgcgccaacgcc 'Aporpium dimidiata_O18238' gcgc--tcgttag--agtgc--cgggcaccggtgtgataattatctgcgccaacgcc 'Aporpium dimidiata_O18261' gcgc--tcgttag--agtgc--cgggcaccggtgtgataattatctgcgccaacgcc 'Protodaedalea foliacea_Yuan5691' tcgtgcctcttaggaggtgcttcggtggacggcgtgataattatctacgcttaaaac 'Aporpium hexagonoides_Wei5584' gtac--tctttag--agtgc--ccggcaccggtgtgataattatctgcgccaacgcc 'Aporpium hexagonoides_Wei5680' gtac--tctttag--agtgc--ccggcaccggtgtgataattatctgcgccaacgcc 'Aporpium_efibulata' gcgc--tcgttag--agtgc--cgggcaccggtgtgataattatctgcgccaacgcc 'Aporpium strigosum_TUFC10589' gcgc--tctttag--agtgt--ccggcaccggtgtgataattatctgcgccaacgcc 'Tremella_foliacea' tttc---acgcag-acgtcg--taagttacgcgtcgactgtgggccgctcacaaccc ; END; BEGIN TREES; Title 'Trees from "MPcombrevised20140215????????.trees"'; LINK Taxa = Taxa; TRANSLATE 1 'Aporpium hexagonoides_ML297', 2 'Auricularia_mesenterica', 3 'Auricularia polytricha_TUFC12920', 4 'Exidia glandulosa_TUFC34008', 5 'Exidiopsis_sp', 6 'Aporpium strigosum_WD1710', 7 'Heterochaete_delicata', 8 'Aporpium strigosum_WD680', 9 'Aporpium_caryae_WD2207', 10 'Protodaedalea foliace_WD548', 11 'Exidiopsis grisea_TUFC100049', 12 'Aporpium strigosum_TFM_F_27651', 13 'Basidiodendron_eyrei', 14 'Protodaedalea foliacea_E701', 15 'Aporpium strigosum_TUFC14542', 16 'Aporpium hexagonoides_TFM_F_27498', 17 'Aporpium caryae_Dai 3952', 18 'Aporpium caryae_Dai 4549', 19 'Aporpium strigosum_Wei5621', 20 'Aporpium strigosum_Wei5990', 21 'Aporpium dimidiata_O18238', 22 'Aporpium dimidiata_O18261', 23 'Protodaedalea foliacea_Yuan5691', 24 'Aporpium hexagonoides_Wei5584', 25 'Aporpium hexagonoides_Wei5680', 26 'Aporpium_efibulata', 27 'Aporpium strigosum_TUFC10589', 28 'Tremella_foliacea'; TREE PAUP_1 = (((((((1:2.0,16:4.0,(24:0.0,25:0.0):2.0):28.0,(((6:4.0,12:1.0):1.0,(8:3.0,15:2.0):1.0):3.0,(19:0.0,20:0.0,27:1.0):1.0):26.0):9.0,(9:4.0,17:0.0,18:0.0):21.0):16.0,((21:2.0,22:0.0):8.0,26:7.0):23.0):33.0,((2:5.0,(3:14.0,(4:12.0,(5:6.0,11:6.0):17.0):17.0):11.0):14.0,7:17.0):39.0):49.0,(10:2.0,(14:12.0,23:16.0):5.0):86.0):4.0,13:101.0,28:108.0); TREE PAUP_2 = ((((((((1:2.0,16:4.0):13.0,(24:0.0,25:0.0):14.0):15.0,(((6:4.0,12:1.0):1.0,(8:3.0,15:2.0):1.0):3.0,(19:0.0,20:0.0,27:1.0):1.0):26.0):9.0,(9:4.0,17:0.0,18:0.0):21.0):16.0,((21:2.0,22:0.0):8.0,26:7.0):23.0):33.0,((2:5.0,(3:14.0,(4:12.0,(5:6.0,11:6.0):17.0):17.0):11.0):14.0,7:17.0):39.0):49.0,(10:2.0,(14:12.0,23:16.0):5.0):86.0):4.0,13:101.0,28:108.0); TREE PAUP_3 = (((((((1:2.0,16:4.0,(24:0.0,25:0.0):2.0):28.0,((((6:4.0,12:1.0):2.0,15:2.0):1.0,8:2.0):3.0,(19:0.0,20:0.0,27:1.0):1.0):26.0):9.0,(9:4.0,17:0.0,18:0.0):21.0):16.0,((21:2.0,22:0.0):8.0,26:7.0):23.0):33.0,((2:5.0,(3:14.0,(4:12.0,(5:6.0,11:6.0):17.0):17.0):11.0):14.0,7:17.0):39.0):49.0,(10:2.0,(14:12.0,23:16.0):5.0):86.0):4.0,13:101.0,28:108.0); TREE PAUP_4 = ((((((((1:2.0,16:4.0):13.0,(24:0.0,25:0.0):14.0):15.0,((((6:4.0,12:1.0):2.0,15:2.0):1.0,8:2.0):3.0,(19:0.0,20:0.0,27:1.0):1.0):26.0):9.0,(9:4.0,17:0.0,18:0.0):21.0):16.0,((21:2.0,22:0.0):8.0,26:7.0):23.0):33.0,((2:5.0,(3:14.0,(4:12.0,(5:6.0,11:6.0):17.0):17.0):11.0):14.0,7:17.0):39.0):49.0,(10:2.0,(14:12.0,23:16.0):5.0):86.0):4.0,13:101.0,28:108.0); END; BEGIN TREES; Title 'Trees from "MLCom.nwk"'; LINK Taxa = Taxa; TRANSLATE 8 'Aporpium hexagonoides_ML297', 18 'Auricularia_mesenterica', 19 'Auricularia polytricha_TUFC12920', 21 'Exidia glandulosa_TUFC34008', 22 'Exidiopsis_sp', 1 'Aporpium strigosum_WD1710', 20 'Heterochaete_delicata', 3 'Aporpium strigosum_WD680', 12 'Aporpium_caryae_WD2207', 25 'Protodaedalea foliace_WD548', 23 'Exidiopsis grisea_TUFC100049', 2 'Aporpium strigosum_TFM_F_27651', 27 'Basidiodendron_eyrei', 24 'Protodaedalea foliacea_E701', 4 'Aporpium strigosum_TUFC14542', 9 'Aporpium hexagonoides_TFM_F_27498', 13 'Aporpium caryae_Dai 3952', 14 'Aporpium caryae_Dai 4549', 6 'Aporpium strigosum_Wei5621', 7 'Aporpium strigosum_Wei5990', 16 'Aporpium dimidiata_O18238', 17 'Aporpium dimidiata_O18261', 26 'Protodaedalea foliacea_Yuan5691', 10 'Aporpium hexagonoides_Wei5584', 11 'Aporpium hexagonoides_Wei5680', 15 'Aporpium_efibulata', 5 'Aporpium strigosum_TUFC10589', 28 'Tremella_foliacea'; TREE PHYLIP_1 = (28,(27,((((((((1,2),(3,4)),(5,(6,7))),((8,9),(10,11))),(12,(13,14))),(15,(16,17))),((20,(18,19)),(21,(22,23)))),(24,(25,26))))); END; BEGIN MESQUITECHARMODELS; ProbModelSet * UNTITLED = 'Jukes-Cantor': 1 - 957; END; BEGIN CODONS; CODESET * UNTITLED = universal: 1 - 957; END; BEGIN ASSUMPTIONS; TYPESET * UNTITLED = unord: 1 - 957; END; Begin MESQUITE; MESQUITESCRIPTVERSION 2; TITLE AUTO; tell ProjectCoordinator; timeSaved 1392909165854; getEmployee #mesquite.minimal.ManageTaxa.ManageTaxa; tell It; setID 0 7334562793143618854; endTell; getEmployee #mesquite.charMatrices.ManageCharacters.ManageCharacters; tell It; setID 0 6532744905021176819; mqVersion 275; checksumv 0 3 1885322042 null getNumChars 957 numChars 957 getNumTaxa 28 numTaxa 28 short true bits 3458764513820540943 states 15 sumSquaresStatesOnly 548889.0 sumSquares -2.3787076483048467E22 longCompressibleToShort false usingShortMatrix true NumFiles 1 NumMatrices 1; mqVersion; endTell; getWindow; tell It; suppress; setResourcesState false false 486; setPopoutState 400; setExplanationSize 0; setAnnotationSize 0; setFontIncAnnot 0; setFontIncExp 0; setSize 1281 825; setLocation 170 174; setFont SanSerif; setFontSize 10; getToolPalette; tell It; endTell; desuppress; endTell; getEmployee #mesquite.minimal.ManageTaxa.ManageTaxa; tell It; showTaxa #7334562793143618854 #mesquite.lists.TaxonList.TaxonList; tell It; setTaxa #7334562793143618854; getWindow; tell It; newAssistant #mesquite.lists.DefaultTaxaOrder.DefaultTaxaOrder; newAssistant #mesquite.lists.TaxonListCurrPartition.TaxonListCurrPartition; getTable; tell It; rowNamesWidth 307; endTell; setExplanationSize 30; setAnnotationSize 20; setFontIncAnnot 0; setFontIncExp 0; setSize 795 758; setLocation 170 174; setFont SanSerif; setFontSize 10; getToolPalette; tell It; setTool mesquite.lists.TaxonList.TaxonListWindow.ibeam; endTell; setActive; endTell; showWindow; getEmployee #mesquite.lists.ColorTaxon.ColorTaxon; tell It; setColor Red; removeColor off; endTell; getEmployee #mesquite.lists.TaxonListAnnotPanel.TaxonListAnnotPanel; tell It; togglePanel off; endTell; endTell; endTell; getEmployee #mesquite.trees.BasicTreeWindowCoord.BasicTreeWindowCoord; tell It; makeTreeWindow #7334562793143618854 #mesquite.trees.BasicTreeWindowMaker.BasicTreeWindowMaker; tell It; suppressEPCResponse; setTreeSource #mesquite.trees.StoredTrees.StoredTrees; tell It; setTreeBlock 1; toggleUseWeights off; endTell; setAssignedID 833.1392873767626.1499360824788714622; getTreeWindow; tell It; setExplanationSize 30; setAnnotationSize 20; setFontIncAnnot 0; setFontIncExp 0; setSize 795 758; setLocation 170 174; setFont SanSerif; setFontSize 10; getToolPalette; tell It; endTell; getTreeDrawCoordinator #mesquite.trees.BasicTreeDrawCoordinator.BasicTreeDrawCoordinator; tell It; suppress; setTreeDrawer #mesquite.trees.SquareTree.SquareTree; tell It; setNodeLocs #mesquite.trees.NodeLocsStandard.NodeLocsStandard; tell It; branchLengthsToggle off; toggleScale on; toggleBroadScale off; toggleCenter on; toggleEven on; endTell; setEdgeWidth 6; orientUp; setCornerMode Right_Angle 50; endTell; setBackground White; setBranchColor Black; showNodeNumbers off; showBranchColors on; labelBranchLengths off; centerBrLenLabels on; showBrLensUnspecified on; showBrLenLabelsOnTerminals on; setBrLenLabelColor 0 0 255; setNumBrLenDecimals 6; desuppress; getEmployee #mesquite.trees.BasicDrawTaxonNames.BasicDrawTaxonNames; tell It; setColor Black; toggleColorPartition on; toggleShadePartition off; toggleShowFootnotes on; toggleNodeLabels on; toggleCenterNodeNames off; toggleShowNames on; namesAngle ?; endTell; endTell; setTreeNumber 1; setDrawingSizeMode 0; toggleLegendFloat on; scale 0; toggleTextOnTree off; showWindow; endTell; desuppressEPCResponse; getEmployee #mesquite.trees.ColorBranches.ColorBranches; tell It; setColor Red; removeColor off; endTell; getEmployee #mesquite.ornamental.BranchNotes.BranchNotes; tell It; setAlwaysOn off; endTell; getEmployee #mesquite.ornamental.ColorTreeByPartition.ColorTreeByPartition; tell It; colorByPartition off; endTell; getEmployee #mesquite.ornamental.DrawTreeAssocDoubles.DrawTreeAssocDoubles; tell It; setOn on; setDigits 4; writeAsPercentage off; toggleCentred on; toggleHorizontal on; toggleWhiteEdges on; setFontSize 10; setOffset 0 0; endTell; getEmployee #mesquite.ornamental.DrawTreeAssocStrings.DrawTreeAssocStrings; tell It; setOn on; toggleCentred on; toggleHorizontal on; setFontSize 10; setOffset 0 0; endTell; getEmployee #mesquite.trees.TreeInfoValues.TreeInfoValues; tell It; panelOpen false; endTell; endTell; makeTreeWindow #7334562793143618854 #mesquite.trees.BasicTreeWindowMaker.BasicTreeWindowMaker; tell It; suppressEPCResponse; setTreeSource #mesquite.trees.StoredTrees.StoredTrees; tell It; setTreeBlock 2; toggleUseWeights off; endTell; setAssignedID 864.1392873898245.8141136140142467697; getTreeWindow; tell It; setExplanationSize 30; setAnnotationSize 20; setFontIncAnnot 0; setFontIncExp 0; setSize 795 758; setLocation 170 174; setFont SanSerif; setFontSize 10; getToolPalette; tell It; endTell; getTreeDrawCoordinator #mesquite.trees.BasicTreeDrawCoordinator.BasicTreeDrawCoordinator; tell It; suppress; setTreeDrawer #mesquite.trees.SquareTree.SquareTree; tell It; setNodeLocs #mesquite.trees.NodeLocsStandard.NodeLocsStandard; tell It; branchLengthsToggle off; toggleScale on; toggleBroadScale off; toggleCenter on; toggleEven on; endTell; setEdgeWidth 6; orientUp; setCornerMode Right_Angle 50; endTell; setBackground White; setBranchColor Black; showNodeNumbers off; showBranchColors on; labelBranchLengths off; centerBrLenLabels on; showBrLensUnspecified on; showBrLenLabelsOnTerminals on; setBrLenLabelColor 0 0 255; setNumBrLenDecimals 6; desuppress; getEmployee #mesquite.trees.BasicDrawTaxonNames.BasicDrawTaxonNames; tell It; setColor Black; toggleColorPartition on; toggleShadePartition off; toggleShowFootnotes on; toggleNodeLabels on; toggleCenterNodeNames off; toggleShowNames on; namesAngle ?; endTell; endTell; setTreeNumber 1; setDrawingSizeMode 0; toggleLegendFloat on; scale 0; toggleTextOnTree off; showWindow; endTell; desuppressEPCResponse; getEmployee #mesquite.trees.ColorBranches.ColorBranches; tell It; setColor Red; removeColor off; endTell; getEmployee #mesquite.ornamental.BranchNotes.BranchNotes; tell It; setAlwaysOn off; endTell; getEmployee #mesquite.ornamental.ColorTreeByPartition.ColorTreeByPartition; tell It; colorByPartition off; endTell; getEmployee #mesquite.ornamental.DrawTreeAssocDoubles.DrawTreeAssocDoubles; tell It; setOn on; setDigits 4; writeAsPercentage off; toggleCentred on; toggleHorizontal on; toggleWhiteEdges on; setFontSize 10; setOffset 0 0; endTell; getEmployee #mesquite.ornamental.DrawTreeAssocStrings.DrawTreeAssocStrings; tell It; setOn on; toggleCentred on; toggleHorizontal on; setFontSize 10; setOffset 0 0; endTell; getEmployee #mesquite.trees.TreeInfoValues.TreeInfoValues; tell It; panelOpen false; endTell; endTell; endTell; getEmployee #mesquite.charMatrices.BasicDataWindowCoord.BasicDataWindowCoord; tell It; showDataWindow #6532744905021176819 #mesquite.charMatrices.BasicDataWindowMaker.BasicDataWindowMaker; tell It; getWindow; tell It; setExplanationSize 30; setAnnotationSize 20; setFontIncAnnot 0; setFontIncExp 0; setSize 795 758; setLocation 170 174; setFont SanSerif; setFontSize 10; getToolPalette; tell It; endTell; setTool mesquite.charMatrices.BasicDataWindowMaker.BasicDataWindow.arrow; colorCells #mesquite.charMatrices.ColorByState.ColorByState; tell It; setStateLimit 9; toggleUniformMaximum on; endTell; colorRowNames #mesquite.charMatrices.TaxonGroupColor.TaxonGroupColor; colorColumnNames #mesquite.charMatrices.CharGroupColor.CharGroupColor; colorText #mesquite.charMatrices.NoColor.NoColor; setBackground White; toggleShowNames on; toggleShowTaxonNames on; toggleTight off; toggleThinRows off; toggleShowChanges off; toggleSeparateLines off; toggleShowStates on; toggleAutoWCharNames off; toggleAutoTaxonNames off; toggleShowDefaultCharNames off; toggleConstrainCW on; toggleBirdsEye off; toggleShowPaleGrid off; toggleShowPaleCellColors off; togglePaleInapplicable on; toggleShowBoldCellText off; toggleAllowAutosize off; toggleColorsPanel off; toggleLinkedScrolling on; toggleScrollLinkedTables off; endTell; showWindow; getWindow; tell It; forceAutosize; endTell; getEmployee #mesquite.charMatrices.ColorCells.ColorCells; tell It; setColor Red; removeColor off; endTell; getEmployee #mesquite.categ.StateNamesStrip.StateNamesStrip; tell It; showStrip off; endTell; getEmployee #mesquite.charMatrices.AnnotPanel.AnnotPanel; tell It; togglePanel off; endTell; getEmployee #mesquite.charMatrices.CharReferenceStrip.CharReferenceStrip; tell It; showStrip off; endTell; getEmployee #mesquite.charMatrices.QuickKeySelector.QuickKeySelector; tell It; autotabOff; endTell; getEmployee #mesquite.charMatrices.SelSummaryStrip.SelSummaryStrip; tell It; showStrip off; endTell; getEmployee #mesquite.align.AlignToDropped.AlignToDropped; tell It; gapCosts 8 3 2 2; subCosts 10 5 10 10 10 5 5 10 10 10 5 10; endTell; getEmployee #mesquite.molec.ColorByAA.ColorByAA; tell It; emphasizeDegeneracy off; endTell; getEmployee #mesquite.molec.SequenceInfoEditor.SequenceInfoEditor; tell It; panelOpen false; endTell; endTell; endTell; endTell; end;