#NEXUS [written Thu Nov 21 01:10:31 CET 2013 by Mesquite version 2.75 (build 564) at Jose-PC/192.168.0.198] BEGIN TAXA; TITLE Taxa; DIMENSIONS NTAX=17; TAXLABELS R3 R26 R24 R13 R14 R4 R1 R19 R20 R21 R23 R22 R18 R15 R17 R16 R25 ; END; BEGIN CHARACTERS; TITLE Character_Matrix; DIMENSIONS NCHAR=119; FORMAT DATATYPE = DNA INTERLEAVE GAP = - MISSING = N; MATRIX R3 AGGTGCGATCATACCAGCACTAATGCACCGGATCCCATCAGAACTCCGCA R26 AGGTGCGATCATACCAGCACTAATGCACCGGATCCCATCAGAACTCCGCA R24 AGGTGCGATCATACCAGCACAAATGCTCCGGATCCCATCAGAACTCTGAA R13 AGGTGCGATCATACCAGCACTAATGCACCGGATCCCATCGGAACTCCGCA R14 AGGTGCGACCATACCAGCACTAATGCACCGGATCCCATCAGAACTCCGCA R4 AGGTGCGATCATACCAGCGCTAATGCACCGGATCCCATCAGAACTCCGCA R1 AGGTGCGATCATACCAGCACTAATGCACCGGATCCCATCAGAACTCCGCA R19 AGGTGCGATCATACCAGCACTAATGCACCGGATCCCATCAGAACTCCGCA R20 AGGTGCGATCATACCAGCACTAATGCACCGGATCCCATCAGAACTCCGCA R21 AGGTGCGATCATACCAGCATTAATGCACCGGATCCCATCAAAACTCCGCA R23 AGGTCCTATCATACCATCACTAATGCACCGGATCCCATCAGAACTTCGCA R22 AGGTGCGATCATACCAGCACTAATGCACCGGATCCCATCAGAACTTCGCA R18 AGTTGCGATCATGCCAGCACTAATGCACTGGATCCCATCAGAACTTCGCA R15 AGGTGCGATCATGCCAGCACTAATGCACCGGATCCCATCAGAACTCCGCA R17 AGGTGCGATCATACCAGCACTAATGCATCGGATCCCATCAGAACTCCGCA R16 AGGTGCGATCATACCAGCACTAATGCAGCGGATCCCATCAGAACTCCACA R25 AGGTGCGATCATACCAGCACTAATGTATCGAATCCCATCAGAACTTCACA R3 GTTAAGCGTGCTTGGGCGAGTGTAGTACTGGGATGGGTGACCTCCTGGGA R26 GTTAAGCG-------------GTAGTACTGGGATGGGTGACCTCCTGGGA R24 GTTAAGCGTGCTTGGGCGAGAGTAGTACTGGGATGGGTGACCTCCTCCGA R13 GTTAAGCGTGCTTGGGCGAGAGTAGTACTGGGATGGGTGACCTCCTGGGA R14 GTTAAGCGTGCTTGGGCGAGAGTAGTACTGGGATGGGTGACCTCCTGGGA R4 GTTAAGCGTGCTTGGGCGAGAGTAGTACTGGGATGGGTGACCTCCTGGGA R1 GTTAAGCGTGCTTGGGCGAGAGTAGTACTGGGATGGGTGACCTCCTGGGA R19 GTCACGCGTGCTTGGGCGAGAGTTGTACTGGGATGGGTGACCTCCTGGGA R20 GTCACGCGTGCTTGGGCGAGAGTTGTACTGGG-TGGGTGACCTCCTGGGA R21 GTTAAGCGTGCTTGGGCGGGAGTTGTACTGGGATGGGTGACCTCCTGGGA R23 GTTAAGCTTGCTTGGGCTGGAGTAGTACTGGGATGGGTGACCTCCTGGGA R22 GTTAAGCGTGCTTGGGCGAGAGTAGTACTGGGATGGATGACCTCCTGGAA R18 GTTAAGCGTGCTTGGGCGAGAGTAGTACTGGGATGGGTGACCTCCTGGGA R15 GTTAAGCGTGCTTGGGCGAGAGTAGTACTGGGATGGGTGACCTCCTGGGA R17 GTTAAGCGTGTTTGGGCGAGAGTAGTACTGGGATGGGTGACCTCCTGGGA R16 GTTAAGCGTGCTTGGGCGAGAGTAGTACTGGGATGGGTGACCTCCTGGGA R25 GTTAAGTGTGCTTGCACGAGAGTAGTACTGGGATGGGTGACCTCCTGGGA R3 AGTCCTTGTGTTGCACCTC R26 AGTCCTTGTGCTGCACCTC R24 AGTCCTTGTGTTGCACCTC R13 AGTCCTTGTGTTGCACCTC R14 AGTCCTTGTGTTGCACCTC R4 AGTCCTTGTGTTGCACCTC R1 AGTCCTTGTGTTGCACCTC R19 AGTCCTTGTGTTGCACCTC R20 AGTCCTTGTGTTGCACCTC R21 AGTCCTTGTGTTGCACCTC R23 AGTCCTGGTGTTGCACCTC R22 TGTCCTTGTGTTGCACCTC R18 AGTCCTTGTGTTGCACCTC R15 AGTCCTTGTGTTGCACCTC R17 AGTCGTTGTGTTGCACCTC R16 AGTCCTTGTGTTGCACCTC R25 AGTCCTAGTGTTGCACCTC ; END; BEGIN ASSUMPTIONS; options deftype = unord; TYPESET * UNTITLED = unord: 1 - 119; END; BEGIN TREES; Title Imported_trees; LINK Taxa = Taxa; TRANSLATE 1 R3, 2 R26, 3 R24, 4 R13, 5 R14, 6 R4, 7 R1, 8 R19, 9 R20, 10 R21, 11 R23, 12 R22, 13 R18, 14 R15, 15 R17, 16 R16, 17 R25; TREE Imported_tree_0 = (((((((((8,9)0.9000,10)0.6800,2)0.1000,(3,6)0.1300)0.0200,(5,7)0.1100)0.0200,(1,4)0.0600)0.0100,(15,16)0.2100)0.2500,(13,14)0.4200)0.3200,(12,(11,17)0.3500)0.3200); END; BEGIN CODONS; CODESET * UNTITLED = universal: 1 - 119; END; BEGIN MESQUITECHARMODELS; ProbModelSet * UNTITLED = 'Jukes-Cantor': 1 - 119; END; Begin MESQUITE; MESQUITESCRIPTVERSION 2; TITLE AUTO; tell ProjectCoordinator; timeSaved 1384992631930; getEmployee #mesquite.minimal.ManageTaxa.ManageTaxa; tell It; setID 0 133448040570028271; endTell; getEmployee #mesquite.charMatrices.ManageCharacters.ManageCharacters; tell It; setID 0 3372172426127964925; mqVersion 275; checksumv 0 3 1697917367 null getNumChars 119 numChars 119 getNumTaxa 17 numTaxa 17 short true bits 15 states 15 sumSquaresStatesOnly 42035.0 sumSquares 42035.0 longCompressibleToShort false usingShortMatrix true NumFiles 1 NumMatrices 1; mqVersion; endTell; getWindow; tell It; suppress; setResourcesState true false 371; setPopoutState 400; setExplanationSize 0; setAnnotationSize 0; setFontIncAnnot 0; setFontIncExp 0; setSize 1280 682; setLocation -8 -8; setFont SanSerif; setFontSize 10; getToolPalette; tell It; endTell; setActive; desuppress; endTell; endTell; end;