#NEXUS [written Sat Sep 13 13:52:39 MDT 2014 by Mesquite version 2.75 (build 564) at donnatvcbook676.unm.edu/129.24.145.221] BEGIN TAXA; TITLE Taxa; DIMENSIONS NTAX=14; TAXLABELS Mycothermus_thermophilus_CBS_623.91_ Remersonia_thermophila_CBS_620.91 'Remersonia thermophila ATCC 22073 (type)' Mycothermus_thermophilus_CBS_621.91 'Sordaria macrospora K-hell' Scytalidium_hyalinum_FMR_8342 Neurospora_crassa_74A Neurospora_discreta_FGSC_8579 Mycothermus_thermophilus_CBS_622.91 Mycothermus_thermophilus_CBS_626.91 'Mycothermus thermophilus CBS 625.91 (type)' Aspergillus_nidulans Scytalidium_hyalinum_FMR_8343 Mycothermus_thermophilus_CBS_627.91 ; END; BEGIN CHARACTERS; TITLE Character_Matrix; DIMENSIONS NCHAR=2200; FORMAT DATATYPE = DNA GAP = - MISSING = ?; MATRIX Mycothermus_thermophilus_CBS_623.91_ ----------------ATGCGTGAGATTGTAAGTTTGGCTCTTCTTCCCAGCTACTTCGGCTCCCCCGCACTCCGAAGCCG-CACCACCGCCTGCGACGCGTCGAGGGAAAGCTGCTTGTTTTC---------TGTCCCTGGGTGGTCTA--CCCCACACGCGATATCCGCGGAGGAGGACGAGCTTCTGTGCCACCAACACAGCTGCTCGACGGCGCGA-GAGACGGGAGCCGAGGT---CGTCTTGACCATGATGGG-ATCGAC--GATGCTGACATTTGTTTTC-TTGTACAGGTTCACCTCCAGACCGGCCAGTGCGTAAGTATTTG---GATCGACCCGAGCGGTGTGTCGTCCGATCG---GATAGATTCGGTGGGCTGACCGATACTTTT-CTCGTCCTTCAGGGCAACCAAATCGGTGCTGCTTTCTGGTATGTTGACATCTGTG---------------------------CATCGATGATGACGGCCTCT-CGTGGAGATGGAT-CTGGTGG--------CTGACCCCTC-GACAGGCAGACCATCTCGGGCG----AGC-----------ATGGTCTCGACGCCA---------ATGGTGTCTACAATGGCACTTCCGAGCTCCAGCTTGAGCGCATGAACGTCTACTTCAACGAGGTGGGTTG---TCC-TCCTGTCTACTTCG---CGGCTTACACTTCGCCGGCTGCAGTAACTGACGCCGACATG-GCATCTAGGCCTCGGGCAACAAGTATGTTCCCCGCGCCGTCCTCGTCGATCTGGAGCCCGGCACCATGGATGCCGTCCGCGCCGGTCCTTTCGGCCAGCTCTTCCGCCCGGACAACTTCGTCTTCGGCCAGTCGGGTGCCGGCAACAACTGGGCCAAGGGTCACTACACTGAGGGTGCCGAGCTCGTCGACCAGGTCCTCGACGTCGTCCGCCGCGAGGCCGAGGGCTGCGACTGCCTCCAGGGCTTCCAGATCACTCACTCGCTCGGTGGCGGTACCGGTGCCGGTATGGGTACCCTCCTGATCTCCAAGATCCGCGAGGAGTTCCCCGACCGCATGATGGCCACCTTCTCGGTCGTCCCCTCCCCCAAGGTCTCGGATACCGTCGTCGAGCCCTACAACGCCACCCTCTCGGTCCACCAGCTGGTCGAGAACTCGGACGAGACCTTCTGCATTGATAACGAGG------------------------------------------------CTCTCTACGACATCTGCATGCGCACCCTGAAGCTGTCGAACCCCTCGTACGGCGACCTCAACTACCTCGTCTCGGCCGTCATGTCGGGCGTCACCGTCTCGCTGCGCTTCCCCGGCCAGCTCAACTCTGACCTCCGCAAGCTCGCCGTGAACATGGTTCCGTTCCCTCGTCTCCACTTCTTCATGGTCGGCTTCGCCCCGCTCACCAGCCGCGGCGCCCACTCGTTCCGCGCCGTCTCGGTGCCGGAGCTCACCCAGCAGATGTTCGACCCCAAGAACATGATGGCTGCCTCCGACTTCCGCAACGGTCGTTACCTGACCTGCTCTGCTATCTTGTAAGTTCTTTGACTCGACTCTTG-CTCAATTCTCCGTTCAACTTGTTAACCATGTTCTCCTCTCACAGCCGCGGCAAGGTTTCGATGAAGGAGGTCGAGGACCAGATGCGCAACGTCCAGAACAAGAACTCGTCGTACTTCGTCGAGTGGATTCCGAACAACGTCCAGACCGCTCTCTGCTCGATCCCGCCGCGCGGCCTCAAGATGTCGTCGACCTTCGTCGGCAACTCGACGGCCATCCAGGAGCTGTTCAAGCGTATTGGCGAGCAGTTCACGGCCATGTTCCGCCGCAAGGCCTTCTTGCACTGGTACACGGGTGAGGGTATGGACGAGATGGAGTTCACTGAGGCTGAGTCCAATATGAACGATCTCGTCTCGGAGTACCAGCAGTACCAGGATGCTGGCGTCGATGAGGAGGAGGAGGAGTACGAGG-------AGGAGGCTCCCGTTGAGCATGAGGAGTAA---------------------------------------------------------------------------------------------------------------------------------------------- Remersonia_thermophila_CBS_620.91 ----------------ATGCGTGAGATTGTAAGTT--------------------TT--------CCTTACCCCG---TCA-CAC----GCCTGCGACGCGTCGAGGGAAAGCTTGTGTTTTTTCCCGAG---TGCCCCTGGGCCG-CTA--CCCCACACGCGACAAC-GCGGAG---------CTTCACCACCGCCAT---GACTGCCCGACTGCTCGA-GCGACCCGGGC-GCGATGGGAGTT---GAGATTATTGT-GACGACAAGATGCTGACATTTCTTTTC-TACGACAGGTTCACCTCCAGACCGGCCAGTGTGTAAGTTGCTGCGAAACCGAATCCGGCGGTGTGTCGTCCGATCG---AGCGGACTGGGTGGGCTGACCGAATCT---------TCCTCAGGGCAACCAAATCGGTGCCGCTTTCTGGTATGTTCTTGACGATG---------------------------CGAAGACAAGA--CAATATC-GATGAGGAGGGTTTGTGATGG--------CTGACGTCTC-TGCAGGCAGACGATTTCCGGCG----AGC-----------ACGGCCTTGATAGCA---------ATGGCGTGTACAACGGCACTTCGGAGCTCCAGCTGGAGCGCATGAACGTCTACTTCAACGAGGTGGGTTTGGCTTT-TCTTGTCATTTTGC---CGTCTTGCGGTTCGTCGACGGCAGTG-CTGACGCGATTTCACGCATACAGGCCTCGGGCAACAAGTATGTTCCCCGCGCCGTCCTCGTCGATCTGGAGCCCGGCACCATGGACGCCGTCCGCGCCGGCCCCTTCGGCCAGCTCTTCCGCCCCGACAACTTCGTCTTCGGCCAGTCGGGCGCCGGCAACAACTGGGCCAAGGGTCACTACACTGAGGGTGCCGAGCTCGTCGACCAGGTCCTCGACGTGGTCCGCCGCGAGGCTGAGGGCTGCGACTGCCTTCAGGGCTTCCAGATCACCCACTCGCTCGGTGGTGGTACCGGTGCCGGTATGGGTACCCTCCTCATCTCCAAGATCCGCGAGGAGTTCCCCGACCGCATGATGGCCACCTTCTCGGTCGTGCCCTCGCCCAAGGTCTCGGATACCGTTGTCGAACCCTACAACGCCACTCTCTCGGTCCACCAGCTGGTCGAGAACTCGGACGAGACCTTCTGCATTGACAACGAGG------------------------------------------------CGCTGTACGACATCTGCATGCGCACCCTCAAGCTGTCCAACCCCTCGTATGGCGACCTCAACTACCTCGTGTCGGCCGTCATGTCGGGCGTCACGGTCTCGCTCCGCTTCCCTGGTCAGCTCAACTCGGATCTCCGCAAGCTGGCCGTCAACATGGTTCCCTTCCCTCGTCTCCACTTCTTCATGGTCGGCTTCGCCCCGCTTACGAGCCGCGGCGCCCACTCGTTCCGCGCCGTCTCGGTCCCGGAGCTCACCCAGCAGATGTTCGACCCTAAGAACATGATGGCTGCCTCCGACTTCCGCAACGGTCGTTACCTGACCTGCTCTGCTATCTTGTAAGTCG-TGGT-----CTCTTGAACCCGCTGAG-GTCCG-TTCGCTGACAAAACTCTC--CTCGCAGCCGTGGCAAGGTCTCGATGAAGGAGGTCGAGGACCAGATGCGCAACGTCCAGAACAAGAACTCGTCCTACTTCGTCGAGTGGATTCCCAACAACGTGCAGACGGCCCTGTGCTCGATCCCTCCGCGCGGCCTCAAGATGTCTTCGACCTTCGTCGGTAACTCGACGGCCATCCAGGAGCTGTTCAAGCGTATCGGCGAGCAGTTCACGGCCATGTTCCGTCGCAAGGCTTTCTTGCACTGGTACACGGGTGAGGGTATGGACGAGATGGAGTTCACTGAGGCCGAGTCCAATATGAACGATCTCGTCTCGGAGTACCAGCAGTACCAGGATGCTGGCATCGACGAGGAGGAGGAGGAGTACGAGG-------AGGAGGCTCCCCTTGAGCACGAGGAGTAA---------------------------------------------------------------------------------------------------------------------------------------------- 'Remersonia thermophila ATCC 22073 (type)' ----------------ATGCGTGAGATTGTAAGTTT------------------CTT--------TCGTACCCCG---CCA-TAC----GCATGCGACGCGTCGGGCCAGAGCTGGGTGTTTTTCCCGGCCTCTGCCCCTGGGCTG-CTA--CCCCACACGCGACAAC-GCGGAG---------CTTCAGCACCGCCAG---GCCTGCCCGACGGCTCGA-GCGACCCAGGCCGCGATGGGCGTCGTCGAGGTTATCGT-GACCACAGGATGCTGACATTTCTCTTC-TACGACAGGTTCACCTCCAGACCGGCCAGTGTGTAAGTTGCTGCGAAACCGAATCCAGCGGTGTGTCGTTCGATCGACGAGCAGACTGGGTGGGCTGACCGAATCT---------CCCTCAGGGCAACCAAATCGGTGCCGCTTTCTGGTATGTTCTTGATGATGATGATGATGATTATGATG---------CAAAGACAAGACCCATGGTC-CACGAGGAGGGTT-GCGATGG--------CTGACACGTC-CGCAGGCAGACGATTTCCGGCG----AGC-----------ACGGCCTCGACAGCA---------ATGGCGTGTACAACGGCACCTCGGAGCTCCAGCTGGAGCGCATGAACGTCTACTTCAACGAGGTGGGTTTCGCTCC-TCTTGCCGCTTTCCTTCCGTCTTGGGGTTCGTCGACGGCAGCG-CTGACGCGATTTTATGCTTGCAGGCCTCGGGCAACAAGTATGTTCCCCGTGCCGTCCTCGTCGATCTGGAGCCCGGCACCATGGACGCCGTCCGCGCCGGCCCCTTCGGCCAGCTCTTCCGCCCCGACAACTTCGTCTTCGGCCAGTCGGGTGCCGGCAACAACTGGGCCAAGGGTCACTACACCGAGGGTGCCGAGCTCGTCGACCAGGTCCTCGACGTGGTCCGCCGCGAGGCTGAGGGCTGCGACTGCCTCCAGGGCTTCCAGATCACCCACTCGCTCGGTGGTGGTACCGGTGCCGGTATGGGTACTCTCCTCATCTCCAAGATCCGCGAGGAGTTCCCCGACCGCATGATGGCCACCTTCTCGGTCGTGCCCTCGCCCAAGGTCTCGGACACCGTCGTCGAGCCCTACAACGCCACCCTCTCGGTCCACCAGCTGGTCGAGAACTCGGACGAGACCTTCTGCATTGACAACGAGG------------------------------------------------CGCTGTACGACATCTGCATGCGCACCCTCAAGCTGTCCAACCCCTCGTACGGCGACCTCAACTACCTCGTGTCGGCCGTCATGTCGGGCGTGACCGTCTCGCTCCGCTTCCCTGGCCAGCTCAACTCGGATCTCCGCAAGCTGGCCGTCAACATGGTTCCTTTCCCTCGTCTCCACTTCTTCATGGTCGGCTTCGCCCCGCTTACGAGCCGCGGCGCCCACTCGTTCCGCGCCGTCTCGGTTCCGGAGCTCACCCAGCAGATGTTCGACCCCAAGAACATGATGGCTGCCTCCGACTTCCGCAACGGTCGCTACCTGACCTGCTCTGCTATCTTGTAAGCTT-TGGTT----CCCTCGACCTCGTTGAC-GTCCGCTTTGCTGACAAGACTCTC--CCCGCAGCCGTGGCAAGGTCTCGATGAAGGAGGTCGAGGACCAGATGCGCAACGTCCAGAACAAGAACTCGTCGTACTTCGTCGAGTGGATCCCCAACAACGTCCAGACGGCCCTGTGCTCGATCCCGCCGCGCGGCCTCAAGATGTCCTCGACCTTCGTCGGCAACTCGACCGCCATCCAGGAGCTGTTCAAGCGTATTGGCGAGCAGTTCACGGCCATGTTCCGCCGCAAGGCCTTCTTGCACTGGTACACGGGTGAGGGCATGGACGAGATGGAGTTCACTGAGGCCGAGTCCAATATGAACGATCTCGTCTCGGAGTACCAGCAGTACCAGGATGCTGGCGTCGACGAGGAGGAGGAGGAGTACGAGG-------AGGAGGCTCCCATTGAGCACGAGGAGTAA---------------------------------------------------------------------------------------------------------------------------------------------- Mycothermus_thermophilus_CBS_621.91 ----------------ATGCGTGAGATTGTAAGTTTGGCTCTTCTTCCCAGCTACTTCGGCTCCCCCGCACTCCGAAGCCG-CACCACCGCCTGCGACGCGTCGAGGGAAAGCTGCTTGTTTTC---------TGTCCCTGGGTGGTCTA--CCCCACACGCGATATCCGCGGAGGAGGACGAGCTTCTGTGCCACCAACACAGCTGCTCGACGGCGCGA-GAGACGGGAGCCGAGGT---CGTCTTGACCATGATGGG-ATCGAC--GATGCTGACATTTGTTTTC-TTGTACAGGTTCACCTCCAGACCGGCCAGTGCGTAAGTATTTG---GATCGACCCGAGCGGTGTGTCGTCCGATCG---GATAGATTCGGTGGGCTGACCGATACTTTT-CTCGTCCTTCAGGGCAACCAAATCGGTGCTGCTTTCTGGTATGTTGACATCTGTG---------------------------CATCGATGATGACGGCCTCT-CGTGGAGATGGAT-CTGGTGG--------CTGACCCCTC-GACAGGCAGACCATCTCGGGCG----AGC-----------ATGGTCTCGACGCCA---------ATGGTGTCTACAATGGCACTTCCGAGCTCCAGCTTGAGCGCATGAACGTCTACTTCAACGAGGTGGGTTG---TCC-TCCTGTCTACTTCG---CGGCTTACACTTCGCCGGCTGCAGTAACTGACGCCGACATG-GCATCTAGGCCTCGGGCAACAAGTATGTTCCCCGCGCCGTCCTCGTCGATCTGGAGCCCGGCACCATGGATGCCGTCCGCGCCGGTCCTTTCGGCCAGCTCTTCCGCCCGGACAACTTCGTCTTCGGCCAGTCGGGTGCCGGCAACAACTGGGCCAAGGGTCACTACACTGAGGGTGCCGAGCTCGTCGACCAGGTCCTCGACGTCGTCCGCCGCGAGGCCGAGGGCTGCGACTGCCTCCAGGGCTTCCAGATCACTCACTCGCTCGGTGGCGGTACCGGTGCCGGTATGGGTACCCTCCTGATCTCCAAGATCCGCGAGGAGTTCCCCGACCGCATGATGGCCACCTTCTCGGTCGTCCCCTCCCCCAAGGTCTCGGATACCGTCGTCGAGCCCTACAACGCCACCCTCTCGGTCCACCAGCTGGTCGAGAACTCGGACGAGACCTTCTGCATTGATAACGAGG------------------------------------------------CTCTCTACGACATCTGCATGCGCACCCTGAAGCTGTCGAACCCCTCGTACGGCGACCTCAACTACCTCGTCTCGGCCGTCATGTCGGGCGTCACCGTCTCGCTGCGCTTCCCCGGCCAGCTCAACTCTGACCTCCGCAAGCTCGCCGTGAACATGGTTCCGTTCCCTCGTCTCCACTTCTTCATGGTCGGCTTCGCCCCGCTCACCAGCCGCGGCGCCCACTCGTTCCGCGCCGTCTCGGTGCCGGAGCTCACCCAGCAGATGTTCGACCCCAAGAACATGATGGCTGCCTCCGACTTCCGCAACGGTCGTTACCTGACCTGCTCTGCTATCTTGTAAGTTCTTTGACTCGACTCTTG-CTCAATTCTCTGTTCAACTTGTTAACCATGTTCTCCTCTCACAGCCGCGGCAAGGTTTCGATGAAGGAGGTCGAGGACCAGATGCGCAACGTCCAGAACAAGAACTCGTCGTACTTCGTCGAGTGGATTCCGAACAACGTCCAGACCGCTCTCTGCTCGATCCCGCCGCGCGGCCTCAAGATGTCGTCGACCTTCGTCGGCAACTCGACGGCCATCCAGGAGCTGTTCAAGCGTATTGGCGAGCAGTTCACGGCCATGTTCCGCCGCAAGGCCTTCTTGCACTGGTACACGGGTGAGGGTATGGACGAGATGGAGTTCACTGAGGCTGAGTCCAATATGAACGATCTCGTCTCGGAGTACCAGCAGTACCAGGATGCTGGCGTCGATGAGGAGGAGGAGGAGTACGAGG-------AGGAGGCTCCCGTTGAGCATGAGGAGTAA---------------------------------------------------------------------------------------------------------------------------------------------- 'Sordaria macrospora K-hell' TCACAAAACCGTCAAGATGCGTGAAATTGTAAGTCT----CCCTATGCTGACCACCACGCCGCGCACGCAGAACAATCC---TTTTTTTTG-------CTCCCTAGA--CCCCTGATTGTCCTA---------CCCCACCAAACTGCCTCGTCTCCTTCTGTGCCTCTGCCTACCGCTTCCTGATATCATCATGATCCTC----CTGCTCGCTCCCTCGCCGTCGCGGGCACTGCTAT--CTCTCGAGGATATCATGGACATAGAC--GCTGACACGATCTCTTTGCGTGCTATAGGTTCATCTCCAGACCGGCCAATGCGTAAGTCGATA----ATAGCT-----CCCCGTCGCGATCCAACAAC-AACAAAAACAGCAGGACTGACACGACACCC-----ACAATCAGGGTAACCAAATCGGTGCCGCCTTCTGGTACGTCGTCATCATCTCGAATAACGGCGCCTTTG-----GTGAACGGGACACTGACAGAATAAACAGGCAGACTATCTCTGGCGAGCACGGCCTCGACGCCTCCGGTGTGTACGTAACTTCGTGCCTGATAAC--TATCCGGTGATGACCTCGAAAGCTCACCGCCCCATAACAGCTACAATGGCACTTCGGAGCTCCAGCTCGAGCGCATGAACGTCTACTTCAACGAGGTGAGCAACAACCAGACCCGATGACCTC------CCTCTAGAGGGGTTGGGT-TGCTAACTAGCTTCGCGCTT----CATAGGCTTCCGGCAACAAGTATGTCCCTCGTGCCGTCCTCGTCGATCTCGAGCCCGGTACCATGGATGCCGTCCGCGCCGGTCCCTTCGGCCAGCTCTTCCGCCCCGACAACTTCGTCTTCGGCCAGTCCGGTGCCGGCAACAACTGGGCCAAGGGTCATTACACTGAGGGTGCTGAGCTTGTTGACCAGGTTCTCGATGTCGTCCGTCGCGAGGCTGAGGGCTGCGACTGCCTCCAGGGTTTCCAGATCACCCACTCCCTCGGTGGTGGTACCGGTGCCGGTATGGGTACCCTCCTTATCTCCAAGATTCGTGAGGAGTTCCCCGACCGCATGATGGCCACCTTCTCCGTCGTGCCCTCCCCCAAGGTCTCCGATACCGTTGTCGAGCCCTACAACGCCACCCTCTCCGTCCATCAGCTCGTTGAGAACTCCGACGAGACCTTCTGCATTGACAACGAGG------------------------------------------------CTCTTTACGACATTTGCATGAGGACTCTCAAGCTCTCCAACCCCTCTTACGGCGATCTTAACCACCTCGTCTCGGCCGTCATGTCCGGTGTTACCGTCTCCCTTCGTTTCCCCGGCCAGCTCAACTCCGATCTCCGCAAGCTCGCCGTCAACATGGTTCCCTTCCCCCGTCTCCATTTCTTCATGGTCGGCTTCGCTCCCCTTACCAGCCGCGGCGCCCACCACTTCCGTGCCGTCTCCGTGCCCGAGTTGACCCAGCAGATGTTCGACCCCAAGAACATGATGGCCGCTTCTGACTTCCGCAACGGCCGTTACCTCACCTGCTCTGCCATCTTGTAAGTTTCC--TCG-AAAATGCTGCTC--TTGTG-ACTAG---TACTGACAAAAT------CAAACAGCCGTGGCAAGGTCTCCATGAAGGAGGTTGAGGACCAGATGCGCAACGTTCAGAACAAGAACTCTTCCTACTTCGTCGAGTGGATCCCGAACAACGTCCAGACTGCCCTCTGCTCCATTCCTCCCCGCGGCCTCAAGATGTCCTCCACCTTCGTCGGTAACTCCACCGCCATCCAGGAGCTCTTCAAGCGTATCGGCGAGCAGTTCACTGCCATGTTCAGGCGCAAGGCTTTCTTGCATTGGTACACTGGTGAGGGTATGGACGAGATGGAGTTCACTGAGGCTGAGTCCAACATGAACGATCTCGTCTCCGAGTACCAGCAATACCAGGATGCTGGTGTTGACGAGGAGGAGGAGGAGTACGAGG-------AGGAGGCCCCTCTTGAGGGCGAGGAGTAGGCAATTCCACTCACTATTC-GGGCTCCTCTGCGCA----------------------------------------------------------------------------------------------------------- Scytalidium_hyalinum_FMR_8342 -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGCGTTTCCCCGGCCAGCTGAACTCTGACCTGCGCAAGCTTGCCGTCAACATGGTTCCTTTCCCTCGTCTCCACTTCTTCATGGTCGGCTTCGCTCCTCTGACCAGCCGTGGCGCCCACTCTTTCCGCGCCGTCACCGTTCCCGAGCTCACCCAGCAGATGTTCGACCCCAAGAACATGATGGCTGCTTCTGACTTCCGCAACGGCCGCTACCTCACCTGCTCCGCCATCTT---------------------------------------------------------------------CCGCGGTAAGGTCTCGATGAAGGAGGTCGAGGACCAGATGCGCAACGTCCAGAACAAGAACTCGTCCTACTTCGTTGAGTGGATCCCCAACAACGTCCAGACCGCCCTTTGCTCTATTCCTCCTCGTGGCCTCAAGATGTCGTCGACTTTCGTCGGCAACTCGACCTCGATCCAGGAGCTGTTCAAGCGTGTCGGTGACCAGTTCACTGCT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Neurospora_crassa_74A TCACCAAACCGTCAAGATGCGTGAAATTGTAAGTCT----CCCTCTGATGCCTACTGTGCCGCGCACGCAGAGCAATCCCTCTTTTTTTTCTCTTTCCCTCCCAAGAGACCCCTGATTGCTCTA---------CCCCACCAAACTGCCTCGTCCCCTTCTGTGCCTCTACCTACTGCTGCCCGAC-TCATTATGATCCT-------GCTCGCTTTCTCGCCATCGCGG--ACTGCCAT--CTATCGCGAGTATTATGGACATCGAC--GCTGACACGATTTCTTCACGTGCTATAGGTTCATCTCCAAACCGGCCAATGCGTAAGTCGATG----ATGGCTTCCACCCCCGTCGCGATCCAACAAC-AACA------GCAGGACTAACACAACAGCC-----ACGATCAGGGTAACCAAATCGGTGCTGCTTTCTGGTACGTCGTCATCATCGCGAACAACCACACCTTTGAGCGAGGGAGCCCGACGCTGACAGAATAAACAGGCAGACTATCTCCGGCGAGCACGGCCTCGATGCCTCCGGTGTGTACGTAACCTCGTGCCCAATAACCATATCTGGTGATGGCCTCGAAAGCTCACCGCCC-ACTACAGGTACAATGGCACCTCTGAGCTCCAGCTCGAGCGCATGAACGTCTACTTCAACGAGGTGAGCAACAACCGGTCTCGACGATCTC----CCCCTCCTCGAGAATTCGCT-CGCTAACTAGCTTCGCGCTT----GACAGGCTTCCGGCAACAAGTATGTCCCTCGTGCCGTCCTCGTCGATCTCGAGCCCGGTACCATGGACGCCGTTCGCGCCGGTCCCTTCGGCCAGCTCTTCCGCCCCGATAACTTCGTCTTCGGCCAGTCCGGTGCTGGCAACAACTGGGCCAAGGGTCACTACACTGAGGGTGCTGAGCTTGTTGACCAGGTTCTCGATGTCGTCCGTCGCGAGGCTGAGGGCTGCGACTGCCTCCAGGGCTTCCAGATCACCCACTCCCTCGGTGGTGGTACCGGTGCCGGTATGGGTACCCTCCTTATCTCCAAGATTCGTGAGGAGTTCCCCGACCGCATGATGGCTACCTTCTCCGTCGTGCCCTCCCCCAAGGTCTCCGATACCGTTGTCGAGCCCTACAACGCCACCCTCTCCGTCCATCAGCTCGTTGAGAACTCCGACGAGACCTTCTGCATTGACAACGAGG------------------------------------------------CGCTTTACGACATTTGCATGAGGACCCTCAAGCTCTCCAACCCCTCTTACGGCGATCTTAACCACCTCGTCTCCGCCGTCATGTCCGGTGTCACCGTCTCCCTCCGTTTCCCCGGCCAGCTGAACTCCGATCTCCGCAAGCTCGCCGTCAACATGGTTCCCTTCCCCCGTCTCCACTTCTTCATGGTCGGCTTCGCTCCCCTTACCAGCCGCGGCGCCCACCACTTCCGTGCCGTCTCCGTGCCCGAGTTGACCCAGCAGATGTTCGACCCCAAGAACATGATGGCTGCTTCTGACTTCCGCAACGGTCGTTACCTCACCTGCTCTGCCATCTTGTAAGTTGCTGATCATGGAATGCTGCTT--TTGACCACTAA---TACTGACGAA-T------CAAACAGCCGTGGCAAGGTCTCCATGAAGGAGGTTGAGGACCAGATGCGCAACGTTCAGAACAAGAACTCTTCCTACTTCGTCGAGTGGATCCCCAACAACGTCCAGACTGCCCTCTGCTCTATCCCTCCCCGCGGTCTCAAGATGTCCTCCACCTTCGTCGGTAACTCCACCGCCATCCAGGAGCTCTTCAAGCGTATCGGCGAGCAGTTCACTGCCATGTTCAGGCGCAAGGCTTTCTTGCATTGGTACACTGGTGAGGGTATGGACGAGATGGAGTTCACTGAGGCTGAGTCCAACATGAACGATCTCGTCTCCGAGTACCAGCAGTACCAGGATGCTGGTGTTGACGAGGAGGAGGAGGAGTACGAGG-------AGGAGGCCCCCCTTGAGGGCGAGGAGTAAATCATTCCACTCA--------------------------------------------------------------------------------------------------------------------------------- Neurospora_discreta_FGSC_8579 TCACCAAACCGTCAAAATGCGTGAAATTGTAAGTCT----CTCTTGGGTGACTACTGCGCCGCGCACGCAGAGCAACCC---TTTTTTTCCCCTTTCCCTCCCAAGA--CCCCTGATTGCTCTA---------CCCCACCAAACTGCCTCGTCTCCTTCTATGGCTCTGCCTACCGCTGCCCGAT-TCATCATGATCCT-------GCTCGCTTTCTCGCCGTCGCGG--ACTGCCAT--CTCTCGCGAGTATCATGGACATCGAC--GCTGACACGATTTCTTCACGTGCTATAGGTTCATCTCCAGACCGGCCAATGCGTAAGTCGATG----ATGGC-------CCCGTCGCGATTCAACGAC-ATTA------GTGGGACTAACACGACAGCC-----ACGATCAGGGTAACCAAATCGGTGCTGCTTTCTGGTACGTAGTCATGATCACGAATAATCACACTTTTGAGCGAGGGAACCAGATGCTGACAGATCCAACAGGCAGACTATCTCCGGCGAGCACGGCCTCGACGCCTCCGGTGTGTACGTAACCTCGTGCCCGATAACGATATATGGTGATGACCTCGAAAGCTCACCGCCC-GCTACAGTTACAATGGCACCTCTGAGCTCCAGCTCGAGCGCATGAACGTCTACTTCAACGAGGTGAGCAACAACCAGGCTCGACGATCTTA---CCCCTCCTAGAGGGTTTGCT-CGCTAACTAGCTTCCCGCTT----GACAGGCTTCCGGCAACAAGTATGTCCCTCGTGCCGTCCTCGTCGATCTCGAGCCCGGTACCATGGACGCCGTCCGCGCCGGTCCCTTCGGCCAGCTCTTCCGCCCCGACAACTTCGTCTTCGGCCAGTCTGGTGCTGGCAACAACTGGGCCAAGGGTCATTACACTGAGGGTGCTGAGCTTGTTGACCAGGTTCTCGATGTTGTCCGTCGCGAGGCTGAGGGCTGCGACTGCCTCCAGGGTTTCCAGATCACCCACTCCCTCGGTGGTGGTACCGGTGCCGGTATGGGTACCCTCCTTATTTCCAAGATTCGTGAGGAGTTCCCCGACCGCATGATGGCTACCTTCTCCGTCGTGCCCTCCCCCAAGGTCTCCGATACCGTTGTCGAGCCCTACAACGCCACCCTCTCCGTCCATCAGCTCGTTGAGAACTCCGACGAGACCTTCTGCATTGACAACGAGG------------------------------------------------CTCTTTACGACATTTGCATGAGGACCCTCAAGCTCTCCAACCCCTCTTACGGCGATCTTAACCATCTCGTCTCTGCCGTCATGTCCGGCGTCACCGTCTCCCTCCGTTTCCCCGGCCAGCTCAACTCCGATCTCCGCAAGCTCGCCGTCAACATGGTTCCCTTCCCCCGTCTCCACTTCTTCATGGTCGGCTTCGCTCCCCTTACCAGCCGCGGCGCCCACCACTTCCGTGCCGTCTCCGTTCCCGAGTTGACCCAGCAGATGTTCGACCCTAAGAACATGATGGCTGCTTCTGACTTCCGCAACGGTCGTTACCTCACCTGCTCTGCCATCTTGTAAGTTGTTGATCACGGAATGCTGCTT--TTGGACACAAA---TACTAACGAA-T------CAAATAGCCGTGGCAAGGTCTCCATGAAGGAGGTTGAGGACCAGATGCGCAACGTTCAAAACAAGAACTCTTCCTACTTCGTCGAGTGGATCCCGAACAACGTCCAGACTGCCCTCTGCTCCATCCCTCCCCGCGGCCTCAAGATGTCCTCCACCTTCGTCGGTAACTCCACCGCCATCCAGGAGCTCTTCAAGCGTATCGGCGAGCAGTTCACTGCCATGTTCAGGCGCAAGGCTTTCTTGCATTGGTACACTGGTGAGGGTATGGACGAGATGGAGTTCACTGAGGCCGAGTCCAACATGAACGATCTCGTCTCCGAGTACCAGCAGTATCAGGATGCTGGTGTTGACGAGGAAGAGGAGGAGTACGAGG-------AGGAGGCCCCCATTGAGGGCGAGGAGTAAGCAATTCCACTCAACATTCCAGGCTCCTCTGCGCA----------------------------------------------------------------------------------------------------------- Mycothermus_thermophilus_CBS_622.91 ----------------ATGCGTGAGATTGTAAGTTTGGCTCTTCTTCCCAGTCACTT-GGCTCCCCCGCACTCCGAAGCCG-CACCACCGCCTGCGACGCGTCGAGGGAAAGCTGCTTGCTTTC---------TGCCCCTGGGTGGTCTA--CCCCACACGCGATATCCGCGGAGGAGGACGAGCTTCAGTGCCACCAACACAGCGGCTCGACGGCGCGA-GAGACGGGAGTCGAGGT---CGTCTTGACGATGATGGA-ATCGGC--GATGCTGACATTTGTTTTC-TTGTACAGGTTCACCTCCAGACCGGCCAGTGCGTAAGTATTTG---GATCGACCCGAGCGGTGTGTCGTCCGATCG---GATAGATTCGGTGGGCTGACCGATACTTTTTCTCGTCCTTCAGGGCAACCAAATCGGTGCTGCTTTCTGGTATGTTGACATCTCTG---------------------------CATCGATGATGACAGGTTCT-CGTGAAGATGGAT-CTGGTGG--------CTGACCCCTC-GACAGGCAGACCATCTCGGGCG----AGC-----------ATGGTCTCGACTCCA---------ATGGTGTCTACAACGGCACTTCCGAGCTCCAGCTTGAGCGCATGAACGTCTACTTCAACGAGGTGGGTTG---TC--TCCTGTCGACCTTG---CCACTTACAATTCGCCAGCAACAGTAACTGACGCCGACATG-GCATTTAGGCCTCGGGCAACAAGTATGTTCCCCGCGCCGTCCTCGTCGATCTGGAGCCCGGCACCATGGATGCCGTCCGCGCCGGTCCCTTCGGCCAGCTCTTCCGCCCGGACAACTTCGTCTTCGGCCAGTCGGGTGCCGGCAACAACTGGGCCAAGGGTCACTACACTGAGGGTGCCGAGCTCGTCGACCAGGTTCTCGACGTCGTCCGCCGCGAGGCCGAGGGCTGCGACTGCCTCCAGGGTTTCCAGATCACCCACTCGCTCGGTGGTGGTACCGGTGCCGGTATGGGTACCCTCCTGATCTCCAAGATCCGTGAGGAGTTCCCCGACCGCATGATGGCCACCTTCTCGGTCGTCCCCTCCCCCAAGGTCTCGGATACCGTCGTCGAGCCCTACAACGCCACCCTCTCGGTCCACCAGCTGGTCGAGAACTCGGACGAGACCTTCTGCATTGATAACGAGG------------------------------------------------CTCTCTACGACATCTGCATGCGCACCCTGAAGCTGTCGAACCCCTCGTACGGCGACCTCAACTACCTCGTCTCGGCCGTCATGTCGGGCGTCACCGTCTCGCTGCGCTTCCCCGGCCAGCTCAACTCTGACCTCCGCAAGCTCGCCGTGAACATGGTTCCCTTCCCTCGTCTCCACTTCTTCATGGTCGGCTTCGCCCCGCTCACCAGCCGCGGCGCCCACTCGTTCCGCGCCGTCTCGGTGCCGGAGCTCACCCAGCAGATGTTCGACCCCAAGAACATGATGGCTGCGTCCGACTTCCGCAACGGTCGTTACCTGACTTGCTCTGCTATCTTGTAAGTTTATGATTTTGGCTCTTTTCCCAATTGTCCATTCAACTTGCTAATCATGTTTTCCTCTCACAGCCGCGGCAAGGTTTCGATGAAGGAGGTCGAGGACCAGATGCGCAACGTCCAGAACAAGAACTCGTCGTACTTCGTCGAGTGGATTCCGAACAACGTCCAGACCGCTCTCTGCTCGATCCCGCCGCGCGGCCTCAAGATGTCGTCGACCTTCGTCGGCAACTCGACGGCCATCCAGGAGCTGTTCAAGCGTATTGGCGAGCAGTTCACGGCCATGTTCCGCCGCAAGGCCTTCTTGCACTGGTACACGGGTGAGGGTATGGACGAGATGGAGTTCACTGAGGCTGAGTCCAATATGAACGATCTCGTCTCGGAGTACCAGCAGTACCAGGATGCTGGTGTCGATGAGGAGGAGGAGGAGTACGAGG-------AGGAGGCTCCCGTTGAGCACGAGGAGTAA---------------------------------------------------------------------------------------------------------------------------------------------- Mycothermus_thermophilus_CBS_626.91 ----------------ATGCGTGAGATTGTAAGTTTGGCTCTTCTTCCCAGTCACTT-GGCTCCCCCGCACTCCGAAGCCG-CACCACCGCCTGCGACGCGTCGAGGGAAAGCTGCTTGCTTTC---------TGCCCCTGGGTGGTCTA--CCCCACACGCGATATCCGCGGAGGAGGACGAGCTTCAGTGCCACCAACACAGCGGCTCGACGGCGCGA-GAGACGGGAGTCGAGGT---CGTCTTGGCGATGATGGA-ATCGGC--GATGCTGACATTTGTTTTC-TTGTACAGGTTCACCTCCAGACCGGCCAGTGCGTAAGTATTTG---GATCGACCCGAGCGGTGTGTCGTCCGATCG---GATAGATTCGGTGGGCTGACCGATACTTTTTCTCGTCCTTCAGGGCAACCAAATCGGTGCTGCTTTCTGGTATGTTGACATCTCTG---------------------------CATCGATGATGACAGGTTCT-CGTGAAGATGGAT-CTGGTGG--------CTGACCCCTC-GACAGGCAGACCATCTCGGGCG----AGC-----------ATGGTCTCGACTCCA---------ATGGTGTCTACAACGGCACTTCCGAGCTCCAGCTTGAGCGCATGAACGTCTACTTCAACGAGGTGGGTTG---TC--TCCTGTCGACCTTG---CCACTTACAATTCGCCAGCAACAGTAACTGACGCCGACATG-GCATTTAGGCCTCGGGCAACAAGTATGTTCCCCGCGCCGTCCTCGTCGATCTGGAGCCCGGCACCATGGATGCCGTCCGCGCCGGTCCCTTCGGCCAGCTCTTCCGCCCGGACAACTTCGTCTTCGGCCAGTCGGGTGCCGGCAACAACTGGGCCAAGGGTCACTACACTGAGGGTGCCGAGCTCGTCGACCAGGTTCTCGACGTCGTCCGCCGCGAGGCCGAGGGCTGCGACTGCCTCCAGGGTTTCCAGATCACCCACTCGCTCGGTGGTGGTACCGGTGCCGGTATGGGTACCCTCCTGATCTCCAAGATCCGTGAGGAGTTCCCCGACCGCATGATGGCCACCTTCTCGGTCGTCCCCTCCCCCAAGGTCTCGGATACCGTCGTCGAGCCCTACAACGCCACCCTCTCGGTCCACCAGCTGGTCGAGAACTCGGACGAGACCTTCTGCATTGATAACGAGG------------------------------------------------CTCTCTACGACATCTGCATGCGCACCCTGAAGCTGTCGAACCCCTCGTACGGCGACCTCAACTACCTCGTCTCGGCCGTCATGTCGGGCGTCACCGTCTCGCTGCGCTTCCCCGGCCAGCTCAACTCTGACCTCCGCAAGCTCGCCGTGAACATGGTTCCCTTCCCTCGTCTCCACTTCTTCATGGTCGGCTTCGCCCCGCTCACCAGCCGCGGCGCCCACTCGTTCCGCGCCGTCTCGGTGCCGGAGCTCACCCAGCAGATGTTCGACCCCAAGAACATGATGGCTGCCTCCGACTTCCGCAACGGTCGTTACCTGACTTGCTCTGCTATCTTGTAAGTTTATGATTTTGGCTCTTTTCCCAATTGTCCATTCAACTTGCTAATCATGTTTTCCTCTCACAGCCGCGGCAAGGTTTCGATGAAGGAGGTCGAGGACCAGATGCGCAACGTCCAGAACAAGAACTCGTCGTACTTCGTCGAGTGGATTCCGAACAACGTCCAGACCGCTCTCTGCTCGATCCCGCCGCGCGGCCTCAAGATGTCGTCGACCTTCGTCGGCAACTCGACGGCCATCCAGGAGCTGTTCAAGCGTATTGGCGAGCAGTTCACGGCCATGTTCCGCCGCAAGGCCTTCTTGCACTGGTACACGGGTGAGGGTATGGACGAGATGGAGTTCACTGAGGCTGAGTCCAATATGAACGATCTCGTCTCGGAGTACCAGCAGTACCAGGATGCTGGTGTCGATGAGGAGGAGGAGGAGTACGAGG-------AGGAGGCTCCCGTTGAGCACGAGGAGTAA---------------------------------------------------------------------------------------------------------------------------------------------- 'Mycothermus thermophilus CBS 625.91 (type)' ----------------ATGCGTGAGATTGTAAGTTTGGCTCTTCTTCCCAGTCACTT-GGCCCCCCCGCACTCCGAAGCCG-CACCACCGCCTGCGACGCGTCGAGGGAAAGCTGCTTGTTTTC---------TGCCCCTGGGTGGTCTA--CCCCACACGCGATATCCGCGGAGGAGGACGAGCTTCAGTGCCACCAACACAGCGGCTCGACGGCGCGA-GAGACGGGAGTCGAGGT---CGTCTTGACGATGATGGA-ATCGGC--GATGCTGACATTTGTTTTC-TTGTACAGGTTCACCTCCAGACCGGCCAGTGCGTAAGTATTTG---GATCGACCCGAGCGGTGTGTCGTCCGATCG---GATAGATTCGGTGGGCTGACCGATACTTTTTCTCGTCCTTCAGGGCAACCAAATCGGTGCTGCTTTCTGGTATGTTGACATCTCTG---------------------------CATCGATGATGACCGGTTCT-CGTGAAGATGGAT-CTGGTGG--------CTGACCCCTC-GACAGGCAGACCATCTCGGGCG----AGC-----------ATGGTCTCGACTCCA---------ATGGTGTCTACAACGGCACTTCCGAGCTCCAGCTTGAGCGCATGAACGTCTACTTCAACGAGGTGGGTTG---TC--TCCTGTCGACCTTG---CCGCTTACAATTCGCCAGCAACAGTAACTGACGCCGACATG-GCATTTAGGCCTCGGGCAACAAGTATGTTCCCCGCGCCGTCCTCGTCGATCTGGAGCCCGGCACCATGGATGCCGTCCGCGCCGGTCCCTTCGGCCAGCTCTTCCGCCCGGACAACTTCGTCTTCGGCCAGTCGGGTGCCGGCAACAACTGGGCCAAGGGTCACTACACTGAGGGTGCCGAGCTCGTCGACCAGGTCCTCGACGTCGTCCGCCGCGAGGCCGAGGGCTGCGACTGCCTCCAGGGTTTCCAGATCACCCACTCGCTCGGTGGTGGTACCGGTGCCGGTATGGGTACCCTCCTGATCTCCAAGATCCGTGAGGAGTTCCCCGACCGCATGATGGCCACCTTCTCGGTCGTCCCCTCCCCCAAGGTCTCGGATACCGTCGTCGAGCCCTACAACGCCACCCTCTCGGTCCACCAGCTGGTCGAGAACTCGGACGAGACCTTCTGCATTGATAACGAGG------------------------------------------------CTCTCTACGACATCTGCATGCGCACCCTGAAGCTGTCGAACCCCTCGTACGGCGACCTCAACTACCTTGTCTCGGCCGTCATGTCGGGCGTCACCGTCTCGCTGCGCTTCCCCGGCCAGCTCAACTCTGACCTCCGCAAGCTCGCCGTGAACATGGTTCCCTTCCCTCGTCTCCACTTCTTCATGGTCGGCTTCGCCCCGCTCACCAGCCGCGGCGCCCACTCGTTCCGCGCCGTCTCGGTGCCGGAGCTCACCCAGCAGATGTTCGACCCCAAGAACATGATGGCTGCCTCCGACTTCCGCAACGGTCGTTACCTGACCTGCTCTGCTATCTTGTAAGTTTATGATTTTGGCTCTTTTCCCAATTGTCCATTCAACTTGCTAACCATGTTTTCTTCTCACAGCCGCGGCAAGGTTTCGATGAAGGAGGTCGAGGACCAGATGCGCAACGTCCAGAACAAGAACTCGTCGTACTTCGTCGAGTGGATTCCGAACAACGTCCAGACCGCTCTGTGCTCGATCCCGCCGCGCGGCCTCAAGATGTCGTCGACCTTCGTCGGCAACTCGACGGCCATCCAGGAGCTGTTCAAGCGTATTGGCGAGCAGTTCACGGCCATGTTCCGCCGCAAGGCCTTCTTGCACTGGTACACGGGTGAGGGTATGGACGAGATGGAGTTCACTGAGGCTGAGTCCAATATGAACGATCTCGTCTCGGAGTACCAGCAGTACCAGGATGCTGGCATCGATGAGGAGGAGGAGGAGTACGAGG-------AGGAGGCTCCCGTTGAGCACGAGGAGTAA---------------------------------------------------------------------------------------------------------------------------------------------- Aspergillus_nidulans ----------------------------------------------------------------------------------CGATTCTTTTTACGGTTTCTGCAAATAATCCTTTTTTTAATCCTC------TATACCCGTCCACACCCTTCACAATGCGTGAGATCGTATGTTGACACTCCCTGTTTGACGCGTCTTGAGGGGTCCCCTTCCCATTAAGGATACCGGGGACCCCAC--CGGTTCTACATACCACGATCTCAGATATGCTGACCATGTGTTTCCCC---AAATAGGTTCACCTTCAGACCGGCCAGTGTGTAAGTGGCAG--AAACAGGGGAATTGGTTGTCTCTGAAAACAGAATACTAAAC----TTGGATGCGTGA-----------------CAGGGTAACCAAATTGGTGCTGCTTTCTGGTGAGCGAAAATTTCACCTTTTTGGAATGATTTCTTTCT--TCGTACACCTGCTAACAAGCCAA-CAGGCAGACCATCTCCGGTGAGCACGGCCTCGATGGCTCCGGTGTGTGAGTACAATCCGTCCAGCATCCGCTGAAAACACGACACCTCAACAGAAC-CTGACACAACCCAGTTACAATGGTACCTCCGACCTTCAACTCGAGCGTATGAACGTCTACTTCAATGAGGTCAGTGG---------ATGA-GATAT------------CAGGTAGCAGTTTGGTGTGTCTGACTTCGTC---------CAGGCCAGCGGTAACAAGTACGTTCCCCGTGCCGTCCTCGTCGATCTCGAGCCCGGTACTATGGATGCCGTCCGCGCCGGTCCCTTCGGCGAGCTCTTCCGTCCCGACAACTTCGTTTTCGGCCAGTCCGGTGCTGGTAACAACTGGGCCAAGGGTCACTACACTGAGGGTGCTGAGCTTGTTGACAACGTCGTCGATGTTGTCCGTCGTGAGGCCGAGGGTTGCGACTGCCTCCAGGGTTTCCAGATCACCCACTCTCTCGGTGGTGGTACCGGTGCCGGTATGGGTACTCTTTTGATCTCCAAGATTCGTGAGGAGTTCCCCGACCGCATGATGGCCACCTTCTCCGTCGTTCCCTCTCCCAAGGTCTCCGACACCGTTGTTGAGCCTTACAACGCCACCCTTTCCGTTCACCAGCTCGTTGAGCACTCCGATGAGACTTTCTGTATTGACAACGAGGTTAGCTATCTCCAGAACTGGGGCCTGGGCTCGTACTGACTTGTAAAGGCTCTCTACGATATCTGCATGCGCACCCTCAAGCTCTCCAACCCCTCCTACGGTGATCTGAACCACCTCGTCTCCGCCGTCATGTCCGGTGTCACCACTTGCCTTCGATTCCCTGGTCAGCTGAACTCTGACCTGCGCAAGCTGGCTGTCAACATGGTTCCCTTCCCTCGTCTGCACTTCTTCATGGTCGGCTTCGCTCCTCTGACCAGCCGTGGCGCCTACTCCTTCCGCGCTGTTTCCGTTCCCGAGTTGACCCAGCAGATGTTCGACCCCAAGAACATGATGGCTGCCTCTGACTTCCGCAACGGCCGCTACCTCACCTGCTCCGCTATCTTGTATGT--------------CATTATCCTTCTTTACATTTATTACTCTGACTAACATC----TTTTCAGCCGTGGAAAGGTCTCCATGAAGGAGGTTGAGGACCAGATGCGCAACATCCAGAGCAAGAACCAGTCCTACTTCGTCGAGTGGATTCCCAACAACATCCAGACCGCTCTCTGCTCCATTCCTCCCCGCGGCCTCAAGATGTCTTCCACCTTCATTGGAAACTCTACTTCCATCCAGGAGCTCTTCAAGCGTGTCGGTGACCAGTTCACTGCTATGTTCCGTCGCAAGGCTTTCTTGCATTGGTACACTGGTGAGGGTATGGACGAGATGGAGTTCACTGAGGCTGAGAGCAACATGAACGATCTCGTCTCCGAGTACCAGCAGTACCAGGACGCCTCCATCTCCGAAGGCGAGGAGGAGTAGTAAGTAATTCGATATCGCTTTTGTCGTGTACCCAATCTAACGTTTTTGCAGCGCCGAGGAGGAGATCATGGAGGGTGAGGAATAAATCATTAGCCAATAGCGATGAATTGAGATCAGCTCATAATAATACCCCTGGTAAACCATGCACGGACTGCAAAAAGGTTCAGTTTCAGCATGCGTCT Scytalidium_hyalinum_FMR_8343 -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGCGTTTCCCCGGCCAGCTGAACTCTGACCTGCGCAAGCTTGCCGTCAACATGGTTCCTTTCCCTCGTCTCCACTTCTTCATGGTCGGCTTCGCTCCTCTGACCAGCCGTGGCGCCCACTCTTTCCGCGCCGTCACCGTTCCCGAGCTCACCCAGCAGATGTTCGACCCCAAGAACATGATGGCTGCTTCTGACTTCCGCAACGGCCGCTACCTCACCTGCTCCGCCATCTT---------------------------------------------------------------------CCGCGGTAAGGTCTCGATGAAGGAGGTCGAGGACCAGATGCGCAACGTCCAGAACAAGAACTCGTCCTACTTCGTTGAGTGGATCCCCAACAACGTCCAGACCGCCCTTTGCTCTATTCCTCCTCGTGGCCTCAAGATGTCGTCGACTTTCGTCGGCAACTCGACCTCGATCCAGGAGCTGTTCAAGCGTGTCGGTGACCAGTTCACTGCT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Mycothermus_thermophilus_CBS_627.91 ----------------ATGCGTGAGATTGTAAGTTTGGCTCTTCTTCCCAGTCACTT-GGCTCCCCCGCACTCCGAAGCCG-CACCACCGCCTGCGACGCGTCGAGGGAAAGCTGCTTGCTTTC---------TGCCCCTGGGTGGTCTA--CCCCACACGCGATATCCGCGGAGGAGGACGAGCTTCAGTGCCACCAACACAGCGGCTCGACGGCGCGA-GAGACGGGAGTCGAGGT---CGTCTTGACGATGATGGA-ATCGGC--GATGCTGACATTTGTTTTC-TTGTACAGGTTCACCTCCAGACCGGCCAGTGCGTAAGTATTTG---GATCGACCCGAGCGGTGTGTCGTCCGATCG---GATAGATTCGGTGGGCTGACCGATACTTTTTCTCGTCCTTCAGGGCAACCAAATCGGTGCTGCTTTCTGGTATGTTGACATCTCTG---------------------------CATCGATGATGACAGGTTCT-CGTGAAGATGGAT-CTGGTGG--------CTGACCCCTC-GACAGGCAGACCATCTCGGGCG----AGC-----------ATGGTCTCGACTCCA---------ATGGTGTCTACAACGGCACTTCCGAGCTCCAGCTTGAGCGCATGAACGTCTACTTCAACGAGGTGGGTTG---TC--TCCTGTCGACCTTG---CCACTTACAATTCGCCAGCAACAGTAACTGACGCCGACATG-GCATTTAGGCCTCGGGCAACAAGTATGTTCCCCGCGCCGTCCTCGTCGATCTGGAGCCCGGCACCATGGATGCCGTCCGCGCCGGTCCCTTCGGCCAGCTCTTCCGCCCGGACAACTTCGTCTTCGGCCAGTCGGGTGCCGGCAACAACTGGGCCAAGGGTCACTACACTGAGGGTGCCGAGCTCGTCGACCAGGTTCTCGACGTCGTCCGCCGCGAGGCCGAGGGCTGCGACTGCCTCCAGGGTTTCCAGATCACCCACTCGCTCGGTGGTGGTACCGGTGCCGGTATGGGTACCCTCCTGATCTCCAAGATCCGTGAGGAGTTCCCCGACCGCATGATGGCCACCTTCTCGGTCGTCCCCTCCCCCAAGGTCTCGGATACCGTCGTCGAGCCCTACAACGCCACCCTCTCGGTCCACCAGCTGGTCGAGAACTCGGACGAGACCTTCTGCATTGATAACGAGG------------------------------------------------CTCTCTACGACATCTGCATGCGCACCCTGAAGCTGTCGAACCCCTCGTACGGCGACCTCAACTACCTCGTCTCGGCCGTCATGTCGGGCGTCACCGTCTCGCTGCGCTTCCCCGGCCAGCTCAACTCTGACCTCCGCAAGCTCGCCGTGAACATGGTTCCCTTCCCTCGTCTCCACTTCTTCATGGTCGGCTTCGCCCCGCTCACCAGCCGCGGCGCCCACTCGTTCCGCGCCGTCTCGGTGCCGGAGCTCACCCAGCAGATGTTCGACCCCAAGAACATGATGGCTGCCTCCGACTTCCGCAACGGTCGTTACCTGACTTGCTCTGCTATCTTGTAAGTTTATGATTTTGGCTCTTTTCCCAATTGTCCATTCAACTTGCTAATCATGTTTTCCTCTCACAGCCGCGGCAAGGTTTCGATGAAGGAGGTCGAGGACCAGATGCGCAACGTCCAGAACAAGAACTCGTCGTACTTCGTCGAGTGGATTCCGAACAACGTCCAGACCGCTCTCTGCTCGATCCCGCCGCGCGGCCTCAAGATGTCGTCGACCTTCGTCGGCAACTCGACGGCCATCCAGGAGCTGTTCAAGCGTATTGGCGAGCAGTTCACGGCCATGTTCCGCCGCAAGGCCTTCTTGCACTGGTACACGGGTGAGGGTATGGACGAGATGGAGTTCACTGAGGCTGAGTCCAATATGAACGATCTCGTCTCGGAGTACCAGCAGTACCAGGATGCTGGTGTCGATGAGGAGGAGGAGGAGTACGAGG-------AGGAGGCTCCCGTTGAGCACGAGGAGTAA---------------------------------------------------------------------------------------------------------------------------------------------- ; END; BEGIN TREES; Title 'Trees from "beta tubulin all plus Shyal Nexus Mesquite"'; LINK Taxa = Taxa; TRANSLATE 1 Mycothermus_thermophilus_CBS_623.91_, 2 Remersonia_thermophila_CBS_620.91, 3 'Remersonia thermophila ATCC 22073 (type)', 4 Mycothermus_thermophilus_CBS_621.91, 5 'Sordaria macrospora K-hell', 6 Scytalidium_hyalinum_FMR_8342, 7 Neurospora_crassa_74A, 8 Neurospora_discreta_FGSC_8579, 9 Mycothermus_thermophilus_CBS_622.91, 10 Mycothermus_thermophilus_CBS_626.91, 11 'Mycothermus thermophilus CBS 625.91 (type)', 12 Aspergillus_nidulans, 13 Scytalidium_hyalinum_FMR_8343, 14 Mycothermus_thermophilus_CBS_627.91; TREE tree_1 = (((6:1000.0,13:1000.0):1000.0,(((8:1000.0,7:1000.0):544.5,5:1000.0):1000.0,((3:1000.0,2:1000.0):1000.0,((11:1000.0,(14:1000.0,9:1000.0,10:1000.0):999.0):1000.0,(1:1000.0,4:2000.0):1000.0):1000.0):1000.0):871.0):500.0,12:500.0); END; BEGIN ASSUMPTIONS; TYPESET * UNTITLED = unord: 1 - 2200; END; BEGIN CODONS; CODESET * UNTITLED = universal: 1 - 2200; END; BEGIN MESQUITECHARMODELS; ProbModelSet * UNTITLED = 'Jukes-Cantor': 1 - 2200; END; Begin MESQUITE; MESQUITESCRIPTVERSION 2; TITLE AUTO; tell ProjectCoordinator; timeSaved 1410637959799; getEmployee #mesquite.minimal.ManageTaxa.ManageTaxa; tell It; setID 0 2254912381584514115; endTell; getEmployee #mesquite.charMatrices.ManageCharacters.ManageCharacters; tell It; setID 0 6899049425339954503; mqVersion 275; checksumv 0 3 3194009778 null getNumChars 2200 numChars 2200 getNumTaxa 14 numTaxa 14 short true bits 15 states 15 sumSquaresStatesOnly 480401.0 sumSquares 480401.0 longCompressibleToShort false usingShortMatrix true NumFiles 1 NumMatrices 1; mqVersion; endTell; getWindow; tell It; suppress; setResourcesState false false 100; setPopoutState 400; setExplanationSize 0; setAnnotationSize 0; setFontIncAnnot 0; setFontIncExp 0; setSize 700 464; setLocation 126 34; setFont SanSerif; setFontSize 10; getToolPalette; tell It; endTell; desuppress; endTell; getEmployee #mesquite.minimal.ManageTaxa.ManageTaxa; tell It; showTaxa #2254912381584514115 #mesquite.lists.TaxonList.TaxonList; tell It; setTaxa #2254912381584514115; getWindow; tell It; newAssistant #mesquite.lists.DefaultTaxaOrder.DefaultTaxaOrder; newAssistant #mesquite.lists.TaxonListCurrPartition.TaxonListCurrPartition; getTable; tell It; rowNamesWidth 292; endTell; setExplanationSize 30; setAnnotationSize 20; setFontIncAnnot 0; setFontIncExp 0; setSize 600 397; setLocation 126 34; setFont SanSerif; setFontSize 10; getToolPalette; tell It; setTool mesquite.lists.TaxonList.TaxonListWindow.ibeam; endTell; setActive; endTell; showWindow; getEmployee #mesquite.lists.ColorTaxon.ColorTaxon; tell It; setColor Red; removeColor off; endTell; getEmployee #mesquite.lists.TaxonListAnnotPanel.TaxonListAnnotPanel; tell It; togglePanel off; endTell; endTell; endTell; getEmployee #mesquite.trees.BasicTreeWindowCoord.BasicTreeWindowCoord; tell It; makeTreeWindow #2254912381584514115 #mesquite.trees.BasicTreeWindowMaker.BasicTreeWindowMaker; tell It; suppressEPCResponse; setTreeSource #mesquite.trees.StoredTrees.StoredTrees; tell It; setTreeBlock 1; toggleUseWeights off; endTell; setAssignedID 1196.1387468438113.2214909880935763294; getTreeWindow; tell It; setExplanationSize 30; setAnnotationSize 20; setFontIncAnnot 0; setFontIncExp 0; setSize 600 397; setLocation 126 34; setFont SanSerif; setFontSize 10; getToolPalette; tell It; endTell; getTreeDrawCoordinator #mesquite.trees.BasicTreeDrawCoordinator.BasicTreeDrawCoordinator; tell It; suppress; setTreeDrawer #mesquite.trees.SquareTree.SquareTree; tell It; setNodeLocs #mesquite.trees.NodeLocsStandard.NodeLocsStandard; tell It; branchLengthsToggle on; toggleScale on; toggleBroadScale off; toggleCenter on; toggleEven on; endTell; setEdgeWidth 6; orientUp; setCornerMode Right_Angle 50; endTell; setBackground White; setBranchColor Black; showNodeNumbers off; showBranchColors on; labelBranchLengths off; centerBrLenLabels on; showBrLensUnspecified on; showBrLenLabelsOnTerminals on; setBrLenLabelColor 0 0 255; setNumBrLenDecimals 6; desuppress; getEmployee #mesquite.trees.BasicDrawTaxonNames.BasicDrawTaxonNames; tell It; setColor Black; toggleColorPartition on; toggleShadePartition off; toggleShowFootnotes on; toggleNodeLabels on; toggleCenterNodeNames off; toggleShowNames on; namesAngle ?; endTell; endTell; setTreeNumber 1; setTree '(((6:1000.0,13:1000.0):1000.0,(((8:1000.0,7:1000.0):544.5,5:1000.0):1000.0,((3:1000.0,2:1000.0):1000.0,((11:1000.0,(14:1000.0,9:1000.0,10:1000.0):999.0):1000.0,(1:1000.0,4:2000.0):1000.0):1000.0):1000.0):871.0):500.0,12:500.0);'; setDrawingSizeMode 0; toggleLegendFloat on; scale 0; toggleTextOnTree off; showWindow; endTell; desuppressEPCResponse; getEmployee #mesquite.trees.ColorBranches.ColorBranches; tell It; setColor Red; removeColor off; endTell; getEmployee #mesquite.ornamental.BranchNotes.BranchNotes; tell It; setAlwaysOn off; endTell; getEmployee #mesquite.ornamental.ColorTreeByPartition.ColorTreeByPartition; tell It; colorByPartition off; endTell; getEmployee #mesquite.ornamental.DrawTreeAssocDoubles.DrawTreeAssocDoubles; tell It; setOn on; setDigits 4; writeAsPercentage off; toggleCentred on; toggleHorizontal on; toggleWhiteEdges on; setFontSize 10; setOffset 0 0; endTell; getEmployee #mesquite.ornamental.DrawTreeAssocStrings.DrawTreeAssocStrings; tell It; setOn on; toggleCentred on; toggleHorizontal on; setFontSize 10; setOffset 0 0; endTell; getEmployee #mesquite.trees.TreeInfoValues.TreeInfoValues; tell It; panelOpen false; endTell; endTell; endTell; getEmployee #mesquite.charMatrices.BasicDataWindowCoord.BasicDataWindowCoord; tell It; showDataWindow #6899049425339954503 #mesquite.charMatrices.BasicDataWindowMaker.BasicDataWindowMaker; tell It; getWindow; tell It; getTable; tell It; rowNamesWidth 185; endTell; setExplanationSize 30; setAnnotationSize 20; setFontIncAnnot 0; setFontIncExp 0; setSize 600 397; setLocation 126 34; setFont SanSerif; setFontSize 10; getToolPalette; tell It; endTell; setTool mesquite.charMatrices.BasicDataWindowMaker.BasicDataWindow.arrow; colorCells #mesquite.charMatrices.ColorByState.ColorByState; tell It; setStateLimit 9; toggleUniformMaximum on; endTell; colorRowNames #mesquite.charMatrices.TaxonGroupColor.TaxonGroupColor; colorColumnNames #mesquite.charMatrices.CharGroupColor.CharGroupColor; colorText #mesquite.charMatrices.NoColor.NoColor; setBackground White; toggleShowNames on; toggleShowTaxonNames on; toggleTight off; toggleThinRows off; toggleShowChanges off; toggleSeparateLines off; toggleShowStates on; toggleAutoWCharNames off; toggleAutoTaxonNames off; toggleShowDefaultCharNames off; toggleConstrainCW on; toggleBirdsEye off; toggleShowPaleGrid off; toggleShowPaleCellColors off; togglePaleInapplicable on; toggleShowBoldCellText off; toggleAllowAutosize off; toggleColorsPanel off; toggleLinkedScrolling on; toggleScrollLinkedTables off; endTell; showWindow; getWindow; tell It; forceAutosize; endTell; getEmployee #mesquite.charMatrices.ColorCells.ColorCells; tell It; setColor Red; removeColor off; endTell; getEmployee #mesquite.categ.StateNamesStrip.StateNamesStrip; tell It; showStrip off; endTell; getEmployee #mesquite.charMatrices.AnnotPanel.AnnotPanel; tell It; togglePanel off; endTell; getEmployee #mesquite.charMatrices.CharReferenceStrip.CharReferenceStrip; tell It; showStrip off; endTell; getEmployee #mesquite.charMatrices.QuickKeySelector.QuickKeySelector; tell It; autotabOff; endTell; getEmployee #mesquite.charMatrices.SelSummaryStrip.SelSummaryStrip; tell It; showStrip off; endTell; getEmployee #mesquite.align.AlignToDropped.AlignToDropped; tell It; gapCosts 8 3 2 2; subCosts 10 5 10 10 10 5 5 10 10 10 5 10; endTell; getEmployee #mesquite.molec.ColorByAA.ColorByAA; tell It; emphasizeDegeneracy off; endTell; getEmployee #mesquite.molec.SequenceInfoEditor.SequenceInfoEditor; tell It; panelOpen false; endTell; endTell; endTell; endTell; end;