NEXUS
[File created by TreeBASE:  7/26/07  21:11:42]
[Matrix accession#: M2625]

BEGIN TAXA;
	TITLE M2625;
	DIMENSIONS  NTAX=23;
	TAXLABELS
		Tenrec_ecaudatus	Sorex_palustris	Setifer	Protenrec	Procavia_capensis	Potamogale	Parageogale	Oryzorictes_talpoides	Orycteropus_afer	Micropotamogale	Microgale_talazaci	Limnogale	Hemicentetes	Geogale	Erythrozootes	Erinaceus_europaeus	Elephantulus_rufescens	Echinops_telfairi	Crocidura_russula	Chrysochloris	Canis_familiaris	Blarina_brevicauda	Didelphis
	;
END;

BEGIN CHARACTERS;
	TITLE M2625;
	DIMENSIONS NCHAR=126;
	FORMAT SYMBOLS = " 0 1 2 3 4 " MISSING = ? GAP = - ;
	CHARSTATELABELS
		1 post_stap_ramus / present reduced, 2 sup_stap_ramus / present reduced, 3 inf_stap_ramus / present reduced, 4 opthart / IC SS IS EC, 5 inf_alveolar / inf_stapedial ext_carotid, 6 promontory_art / medial_cochlea lateral_cochlea, 7 staped_bifurc / within_midear within_brcase, 8 infraorb_in_cavepi / no yes, 9 prox_ext_crtd / med_constrictor lat_constrictor, 10 VNO_duct / into_NP_duct into_nasal_fossa, 11 outer_bar / lat_closed lat_open, 12 nasopal_duct / paired single, 13 'NPduct cart-PRS' / absent present, 14 'NPduct cart-CNX' / isolated cnx_parasept, 15 'nasolac duct-PRS' / present reduced, 16 'nasolac duct-SHLD' / unshielded shielded, 17 papillary_cart / present reduced, 18 VNO_vessels / large_superolat inconspic, 19 Inf_nasal_sept / inf_parallel inf_rounded, 20 zona_annularis / complete reduced, 21 tymp_proc_basisphenoid / reduced present, 22 piriform_fenestra / absent present, 23 caudal_tymp_proc_petrosal / reduced shields_post_bulla, 24 rostral_tymp_proc_petrosal / present nonapical, 25 anterior_tympanic_roof / neither squamosal alisphenoid, 26 epitympanic_recess / contin_w.midear enlarged, 27 tubal_canal / not_closed_by_sph closed_by_sph, 28 'ectotymp-PHAN' / aphaneric semiphan phaneric, 29 'ectotymp-EXPND' / simple expanded, 30 entotympanic / absent small contrib_bulla, 31 infstap_for_alisph / absent present, 32 'alisph canal-pres' / absent present, 33 'alisph canal-pos' / lat_V contin_V, 34 basisphenoid_pit / absent present, 35 fenestrate_basioccip / no yes, 36 suboptic_foramen / absent present, 37 'mtuber-PM' / reduced present hyper, 38 'mtuber-SQ' / reduced present, 39 'SQtuber-jaw dist' / short elongate, 40 dual_ectopterygoid / no yes, 41 maxilla_on_pteryg / no yes, 42 postpal_spine / reduced present, 43 petmast_position / expsd_posteriorly expsd_laterally not_expsd, 44 'optic for-PRS' / present absent, 45 'optic for-SIZE' / caliber_as_V smaller_V, 46 ethmoid_for / anterior_SF within_SF, 47 'sincan-PRS' / present absent, 48 'sincan-OPN' / confl_w_SF 'inbt SF-EF' confl_w_EF, 49 dorsal_palatine_for. / confl_w_sphpal separate, 50 'entoglen-PRS' / abs pres, 51 'entoglen-JA' / no_jaw_artic jaw_artic, 52 'entoglen-COMP' / all_squam half_alisph all_alisph, 53 'lac formn-PRS' / reduced present, 54 'lac formn-OPN' / open_post open_lat, 55 orbital_wing_maxilla / no partial yes, 56 'zygarch-PRS' / complete incomplete, 57 'zygarch-build' / robust slender, 58 origin_max_zygoma / M1_or_ant M2 M3, 59 size_max_zygoma / posterolat_proj reduced, 60 length_of_infraorb_canal / long short, 61 Frontal_proportions / elongate even_w_parietal reduced, 62 nasal_shape / broad narrow, 63 nasal_length / ant_or_at_antorb post_to_antorb, 64 lacrimal_flange / reduced prominent into_orbit, 65 crista_galli / median_ridge flat, 66 upper_ant_dent / ant_I_enlarged Is_equal, 67 premaxillary_dentition / none 1ui 2ui 3ui 5ui, 68 up.antmol_excl_Is / 5am 4am 3am '< 3am', 69 upper_Canine / premolariform bulbous trenchant, 70 molariform_P3 / no yes, 71 molariform_P4 / no yes, 72 carnassial_P4 / no yes, 73 metacone / present connate_w_paracone absent, 74 protocone / present reduced, 75 hypocone / present reduced, 76 M1_parastyle / flush_wcing ant_proj, 77 'M2/CBC' / abs pres, 78 'upper M3-PRS' / pres abs, 79 'upper M3-styshelf' / short long, 80 'upper M3-mstyle' / lingual_meta buccal_meta, 81 lower_ant_dent / ant_I_enlarged is_equal i2_enlarged, 82 lower_antemolars / 8_antemolars 7_am 6_am 5_am 3_am less_or_equal_to_2_am, 83 'molariform p/3' / no_meta yes, 84 'molariform p/4' / no_meta yes, 85 talonid_basin / present reduced, 86 'm1-2 hypocnld' / reduced present, 87 'hypoflxd-pc occl' / absent present, 88 2dary_hypoflxd_basin / closed open, 89 'lower m3-PRS' / present absent, 90 'lower m3-LEN' / m3_long 'as m1-2' m3_short, 91 mental_foramnia / p4 p3 multiple m1, 92 'mandib cond-LEN' / narrow elongate, 93 'mandib cond-NUM' / single dual, 94 condyle_height / at_toothrow above_toothrow, 95 int_coronoid_fossa / _flat pocketed, 96 ventral_crest_on_C2 / present absent, 97 sacral_vertebrae / '2-4 verts' '> 4 verts', 98 'verts in sacro-iliac art' / s1_alone 's1-2' 's1-3', 99 sacral_neural_spines / weak_or_not_fused fused abs_neural_spines, 100 clavicles / present shortened absent, 101 scapula / triangular elongate, 102 'metacromion-PRS' / present absent, 103 'metacromion-shape' / blunt elongate, 104 'acromion-PRS' / present absent, 105 'acromion-shape' / blunt elongate, 106 'scapspine-len' / short elongate, 107 entepicondylar_for / present absent, 108 medial_epicondyle / abs pres, 109 'medepicond-shape' / promin hypertr, 110 olecranon_fenestra / absent thin_or_present, 111 distal_ulna / present reduced, 112 ulnocarpal_art / broad styloid_only, 113 forearm_longbones / two three, 114 iliac_blades / sag_or_rounded coronal, 115 proximal_ilia / 'cranial s-i joint' 'even s-i joint', 116 'iliopec tuber-PRS' / weak prominent, 117 'iliopec tuber-shape' / extends_medially extends_inferiorly, 118 internal_acetab_pelv_shape / smooth concave, 119 pubic_symphysis / extensive reduced, 120 pubis_length / as_isch_or_shorter longer_than_isch, 121 angle_of_pubic_ramus / ' > 15 angle' parallel, 122 3rd_trochanter / proximal distal, 123 'fusion of distal tibia-fib' / no yes, 124 distal_fibula / lateral_astrag socket_for_calc ball_for_astrag, 125 calcaneal_tubercle / blunt elongate sep_fibular_facet, 	126 'interinc-gap' / narrow wide
	;
	MATRIX
		Tenrec_ecaudatus             101(03)10-10010110010101(01)0(01)20020001110001001000110001111121-101110011(23)12110211000111(12)1110110(01)20010101000000000101010110-011000010
		Sorex_palustris              100?0?0??00011011010011100020000-000001000101000111?11?1-110???010310010000000100400000-02301010001010101001000000010111101010
		Setifer                      00000001001111001110100120020011110001001010110001111121-(01)010110102121102110001112111011022001010100000000010(01)010010-01100001(01)
		Protenrec                    ????????????????????????????????????????????????????10?1-100???0?????01020111010??011011003???0???????????????????????????????
		Procavia_capensis            111010-1?000110?111001010002110110000011(01)120001-0111100000001002001101100000000-2211000-01210100111201-1-010-1000100-000000000
		Potamogale                   010000011010101-1110101010110001101(01)01001010101-01100-01-1012100(01)031011010111010210100100(01)210000010201-1-010-00000011011011010
		Parageogale                  ?????????????????????????????????????????0?????????????1-110?????022?01021111010????1????????????????????????????????????????1
		Oryzorictes_talpoides        ????????????????????111020020011100000001010100001101(01)21-10111001131201021111010110110110011000101000000000100010000-011001010
		Orycteropus_afer             101011-??00011001?00000121020000-00001000000000101011000010010000-0---------0--?----------20010111000000000100000001110001001-
		Micropotamogale              000100011010101-1110101010110001101101001010100101100-21-1012110103101102011101021(01)1101101310000010201-1-011000100011011101010
		Microgale_talazaci           000(01)000100101000101011102002001110(01)100001010100(01)01101121-10111101031(02)01021111010210110110011000101000000100100010000-011001010
		Limnogale                    ????????????????????1110000200(01)1101100001010100101100-21-10121101031011021111010210110110011000001000000000100010000-011001010
		Hemicentetes                 001110-11010110010101(01)0120020001100001001000110001111121-201(01)1001131(02)000211110111100100-0120010101000000000100010110-011000010
		Geogale                      0001001100101000001011102002001110(01)101001010100001101121-11011101021001021111010030110110020000001000000001101010000-011000??1
		Erythrozootes                ?????????????????????????????????????????????0??0???11???100?????021011020110010???1101100???????????????????????????????????0
		Erinaceus_europaeus          100(02)000010(01)0110110101000200200(01)(01)01001001010010011101102000001111103100100000000-03-1000-02210101020000000010-1000000-011011001
		Elephantulus_rufescens       1001111110001000001000102012121(01)0001000101100001110110000101110111300110000001--1001000-(01)2200101010000100000-11-00011100001000
		Echinops_telfairi            0001000100010-001010100120020010-10001001010110001111121-001011010212110211101--221110111-2001010100000000010(01)010010-010000010
		Crocidura_russula            00010100100010011111011100020000-000011000101(01)0(02)11101101-011?110(01)03300100000(01)0100400000-02301?10011000101001000000010111101010
		Chrysochloris                100-01001(01)000-011110101021021110-00000000001-101010?11201001?10010310110211010112111100-(01)21000010(12)100000010110001010-011101110
		Canis_familiaris             111(03)10-0101011001110000120021101100101000100001-10--10000000011011302011000001--1000000-02210000010201-00010-10100011000000000
		Blarina_brevicauda           00010100100011011010011100020000-000011000101000111011?1-110?11010??0010000000100400000-02301?10001010101001000000010111101010
		Didelphis                    111010-010000-00(01)000000120020000-00001000001-01-110210000000101011412000001110111000010-0121010101000000000100010000-0000000(01)0
	;
END;

BEGIN ASSUMPTIONS;
OPTIONS DEFTYPE = unord PolyTcount = MINSTEPS ; 
 END;