#NEXUS Begin taxa; Dimensions ntax=25; Taxlabels Herzogiella_seligeri_Denmark Isopterygiopsis_muelleriana_Scotland Plagiothecium_cavifolium_Denmark Plagiothecium_cavifolium_Germany Plagiothecium_curvifolium_Denmark Plagiothecium_curvifolium_Germany Plagiothecium_denticulatum_Denmark Plagiothecium_denticulatum_var_obtusifolium_Germany Plagiothecium_draytonii_HI_USA Plagiothecium_euryphyllum_Yunnan_China Plagiothecium_handelii_Yunnan_China Plagiothecium_laetum_Germany Plagiothecium_latebricola_Denmark Plagiothecium_neckeroideum_Yunnan_China Plagiothecium_nemorale_Germany Plagiothecium_nemorale_Iran Plagiothecium_nemorale_aquatic_Germany Plagiothecium_piliferum_WA_USA Plagiothecium_platyphyllum_Finland Plagiothecium_ruthei_Denmark Plagiothecium_succulentum_Denmark Plagiothecium_succulentum_concave_leaves_Denmark Plagiothecium_undulatum_Denmark Pseudotaxiphyllum_elegans_Germany Taxiphyllum_sp_Yunnan_China ; End; Begin paup; Set storebrlens=y; End; Begin trees; [Treefile saved Thursday, January 1, 1970 10:30 PM] [! >Data file = rbcL_Wynns_10_Jan_14.nex >Branch-and-bound search settings: > Optimality criterion = parsimony > Character-status summary: > Of 1284 total characters: > All characters are of type 'unord' > All characters have equal weight > 1156 characters are constant > 69 variable characters are parsimony-uninformative > Number of parsimony-informative characters = 59 > Gaps are treated as "missing" > Initial upper bound: unknown (compute heuristically) > Addition sequence: furthest > Initial 'MaxTrees' setting = 100 (will be auto-increased by 100) > Branches collapsed (creating polytomies) if maximum branch length is zero > 'MulTrees' option in effect > Topological constraints not enforced > Trees are unrooted > >Branch-and-bound search completed: > Score of best tree found = 196 > Number of trees retained = 6 > Time used = 00:03:50.0 ] Translate 1 Herzogiella_seligeri_Denmark, 2 Isopterygiopsis_muelleriana_Scotland, 3 Plagiothecium_cavifolium_Denmark, 4 Plagiothecium_cavifolium_Germany, 5 Plagiothecium_curvifolium_Denmark, 6 Plagiothecium_curvifolium_Germany, 7 Plagiothecium_denticulatum_Denmark, 8 Plagiothecium_denticulatum_var_obtusifolium_Germany, 9 Plagiothecium_draytonii_HI_USA, 10 Plagiothecium_euryphyllum_Yunnan_China, 11 Plagiothecium_handelii_Yunnan_China, 12 Plagiothecium_laetum_Germany, 13 Plagiothecium_latebricola_Denmark, 14 Plagiothecium_neckeroideum_Yunnan_China, 15 Plagiothecium_nemorale_Germany, 16 Plagiothecium_nemorale_Iran, 17 Plagiothecium_nemorale_aquatic_Germany, 18 Plagiothecium_piliferum_WA_USA, 19 Plagiothecium_platyphyllum_Finland, 20 Plagiothecium_ruthei_Denmark, 21 Plagiothecium_succulentum_Denmark, 22 Plagiothecium_succulentum_concave_leaves_Denmark, 23 Plagiothecium_undulatum_Denmark, 24 Pseudotaxiphyllum_elegans_Germany, 25 Taxiphyllum_sp_Yunnan_China ; tree PAUP_1 = [&U] (((((1:10,2:27):2,((((((3:0,4:0,22:1):1,(15:0,16:0,17:0,21:0):4):5,((((5:0,6:0):2,12:2):7,13:7):3,(9:3,23:1):3):2):2,((7:0,20:4):2,(8:1,19:0):1):2):2,14:4):3,10:14):7):7,(18:8,24:14):7):31,11:50):0,25:0); tree PAUP_2 = [&U] ((((((1:11,2:28):2,((((((3:0,4:0,22:1):1,(15:0,16:0,17:0,21:0):4):5,((((5:0,6:0):2,12:2):7,13:7):3,(9:3,23:1):3):2):2,((7:0,20:4):2,(8:1,19:0):1):2):2,14:4):3,10:14):6):3,24:16):7,18:13):33,11:50):0,25:0); tree PAUP_3 = [&U] (((((1:12,2:27):1,(((((((3:0,4:0,22:1):1,(15:0,16:0,17:0,21:0):4):5,((((5:0,6:0):2,12:2):7,13:7):3,(9:3,23:1):3):2):2,((7:0,20:4):2,(8:1,19:0):1):2):2,14:4):3,10:14):5,24:14):3):6,18:13):33,11:50):0,25:0); tree PAUP_4 = [&U] (((((1:10,2:27):2,(18:7,24:15):3):6,((((((3:0,4:0,22:1):1,(15:0,16:0,17:0,21:0):4):5,((((5:0,6:0):2,12:2):7,13:7):3,(9:3,23:1):3):2):2,((7:0,20:4):2,(8:1,19:0):1):2):2,14:4):3,10:14):11):32,11:50):0,25:0); tree PAUP_5 = [&U] ((((1:11,2:26):6,(((((((3:0,4:0,22:1):1,(15:0,16:0,17:0,21:0):4):5,((((5:0,6:0):2,12:2):7,13:7):3,(9:3,23:1):3):2):2,((7:0,20:4):2,(8:1,19:0):1):2):2,14:4):3,10:14):4,(18:9,24:13):2):8):31,11:50):0,25:0); tree PAUP_6 = [&U] ((((1:13,(((((((3:0,4:0,22:1):1,(15:0,16:0,17:0,21:0):4):5,((((5:0,6:0):2,12:2):7,13:7):3,(9:3,23:1):3):2):2,((7:0,20:4):2,(8:1,19:0):1):2):2,14:4):3,10:14):4,(18:9,24:13):2):8):6,2:26):33,11:50):0,25:0); End;