NEXUS
[File created by TreeBASE:  7/26/07  21:11:48]
[Matrix accession#: M2637]

BEGIN TAXA;
	TITLE M2637;
	DIMENSIONS  NTAX=19;
	TAXLABELS
		Trichonympha_agilis	Pseudotrichonympha_grassii_02A38	Holomastigotoides_mirabile_04A74	Spirotrichonympha_leidyi_Sp28	Tritrichomonas_foetus	Monocercomonas_sp._1	Monocercomonas_sp._2	Trichomitus_batrachorum_1	Trichomitus_batrachorum_2	Hypotrichomonas_acosta_2	Hypotrichomonas_acosta_3	Trichomonas_vaginalis	Tetratrichomonas_gallinarum_1	Tetratrichomonas_gallinarum_2	Tetratrichomonas_gallinarum_3	Devescovina_sp._D14	Devescovina_sp._D16	Stephanonympha_sp._St20	Stephanonympha_sp._St19
	;
END;

BEGIN CHARACTERS;
	TITLE M2637;
	DIMENSIONS NCHAR=380;
	FORMAT datatype = protein gap = - ;
	MATRIX
		Trichonympha_agilis                    IGAKFWEVVSDEHGIDPTGSYHGDSDLQLERINVYYNEATGGKYVPRAVLVDLEPGTMDSVRAGQYGQLFRPDNFVFGQSGAGNNWAKGFYTEGQELAESILDVVRKEAESCDSLQGFQLVHSLGGGTGAGLGTLLLNKLREEYPDRILSTYSIVPSPKVSDTVVEPYNCTLSVHQLVESADEVFCIDNEALYDICFRTLKLTTPTYGDLNHLVSMVMSGTTCSLRFPGQLNAD?RKLAVNLVPFPRLHFFICGFAPLTSRGSQQYRALTVPELTSQLFDNKNMMAACDPRRGVYLTVSAHFRGRMSSKEVDEQMLNIQARNTSYFVEWIPNNVKSSITDIPPRGLKMAATFIGNSTSFRELFTRVDSQFQKMYARRAFI
		Pseudotrichonympha_grassii_02A38       IGAKFWEVVSDEHGIDPTGSYHGDSDLQLERINVYYNEATGGKYVPRAVLVDLEPGTMDSVRAGQFGQLFRPDNFVFGQSGAGNNWAKGFYTEGQELCESILDVVRKEAESCDALQGFQLVHSLGGGTGAGLGTLLLNKLREEYPDRILSTYSIVPSPKVSDTVVEPYNCTLSVHQLVESADEVFCIDNEALYDICFRTLKLTTPTYGDLNHLVSMVMSGTTCSLRFPGQLNADLRKLAVNLVPFPRLHFFICGFAPLTSRGSQQYRALTVPELTSQLFDNKNMMAACDPRRGVYLTVSAHFRGRMSSKEVDEQMLNIQARNTSYFVEWIPNNVKCSITDIPPRGLKMAATFIGNSTSFRELFTRVDSQFTKMYARRAFI
		Holomastigotoides_mirabile_04A74       IGAKFWEVISDEHGIDPTGSYHGDSDLQLERINVYYNEATGGKYVPRAILVDLEPGTMDSVRAGQYGQLFRPDNFVFGQSGAGNNWAKGYYTEGQELCESILDVIRKEAESCDALQGFQLCHSLGGGTGSGLGTLLLNKLREEYPDRILSTYSVVPSPKVSDTVVEPYNCTLSVHQLVESADEVFCIDNEALYDICFRTLKLTTPTYGDLNHLVTMVMSGTTCSLRFPGQLNADLRKLAVNLVPFPRLHFFICEFAPLTSRGSQQYRALTVPELTSQLFDNKNMMAACDPRRGVYLTVSAHFRGRMSSKEVDEQMLNIQARNTSYFVEWIPSNVKSSICDIPPRGLKMAATFIGNTTAFRELFTRVDAQFQKMYARRAFI
		Spirotrichonympha_leidyi_Sp28          IGAKFWEVISDEHGIDPTGSYHGDSDLQLERINVYFNEATGGKYVPRAILVDLEPGTMDSVRAGQYGQLFRPDNFVFGQSGAGNNWAKGYYTEGQELCESILDVIRKEAESCDALQGFQLTHSLGGGTGSGLGTLLLNKLREEYPDRILSTYSVVPSPKVSDTVVEPYNCTLSVHQLVESADEVFCIDNEALYDICFRTLKLTTPTYGDLNHLVTMVMSGTTCSLRFPGQLNADLRKLAVNLVPFPRLHFFICGFAPLTSRGSQQYRALTVPELTSQLFDNKNMMAACDPRRGVYLTVSAHFRGRMSSKEVDEQMLNIQARNTSYFVEWIPSNVKSSICDIPPRGLKMAATFIGNTTAFRELFTRVDAQFQKMYARRAFI
		Tritrichomonas_foetus                  IGAKFWEVISDEHGIDPTGSYHGDSDLQLERINVYYNEATGGKYVPRAILVDLEPGTMDSVRAGQYGQLFRPDNFVFGQSGAGNNWAKGYYTEGQELAESILDVIRKEAESCDALQGFQLVHSLGGGTGSGLGTLLLNKLREEYPDRILSTYSIVPSPKVSDTVVEPYNCTLSVHQLVESADEVFCIDNEALYDICFRTLKLTTPTYGDLNHLVSMVMSGTTCSLRFPGQLNADLRKLAVNLVPFPRLHFFIVGFAPLTSRGSQQYRALTVPELTSQLFDNKNMMAACDPRRGVYLTVSAHFRGRMSSKEVDEQMLNIQARNTSYFVEWIPNNVKSSICDIPPRGLKMAATFIGNTTAFRELFTRVDSQFQKMYARRAFI
		Monocercomonas_sp._1                   IGAKFWEVISDEHGIDPTGSYHGDSDLQLERINVYYNEATGGKYVPRAVLVDLEPGTMDSVRAGQYGQLFRPDNFVFGQSGAGNNWAKGYYTEGQELAESILDVIRKEAESCDALQGFQLVHSLGGGTGSGLGTLLLNKLREEYPDRILSTYSIVPSPKVSDTVVEPYNCTLSVHQLVESADEVFCIDNEALYDICFRTLKLTTPTYGDLNHLVSMVMSGTTCSLRFPGQLNADLRKLAVNLVPFPRLHFFIVGFAPLTSRGSQQYRALTVPELTSQLFDNKNMMAACDPRRGVYLTVSAHFRGRMSSKEVDEQMLNIQARNTSYFVEWIPNNVKSSICDIPPRGLKMAATFIGNTTAFRELFTRVDSQFQKMYARRAFI
		Monocercomonas_sp._2                   IGAKFWEVISDEHGIDPTGSYHGDSDLQLERINVYYNEATGGKYVPRAVLVDLEPGTMDSVRAGQYGQLFRPDNFVFGQSGAGNNWAKGYYTEGQELAESILDVIRKEAESCDALQGFQLVHSLGGGTGSGLGTLLLNKLREEYPDHILFTYSIVPSPKVSDTVVEPYNCTLSVHQLVESADEVFCIDNEALYDICFRTLKLTTPTYGDLNHLVSMVMSGTTCSLRFPGQLNADLRKLAVNLVPFPRLHFFIVGFAPLTSRGSQQYRALTVPELTSQLFDNKNMMAACDPRRGVYLTVSAHFRGRMSSKEVDEQMLNIQARNTSYFVEWIPNNVKSSICDIPPRGLKMAATFIGNTTAFRELFTRVDSQFQKMYARRAFI
		Trichomitus_batrachorum_1              -------VISDEHGIDPTGSYHGDSDLQLERINVYYNEATGGKYVPRAVLVDLEPGTMDSVRAGQYGQLFRPDNFVFGQSGAGNNWAKGYYTEGQELCESILDVIRKEAESCDALQGFQLVHSLGGGTGSGLGTLLLNKLREEYPDRILSTYSIVPSPKVSDTVVEPYNCTLSVHQLVESADEVFCIDNEALYDICFRTLKLTTPTYGDLNHLVSMVMSGTTCALRFPGQLNSDLRKLAVNLVPFPRLHFFICGFAPLTSRGSQQYRALTVPELTSQLFDNKNMMAACDPRRGVYLTVSAHFRGRMSSKEVDEQMLNIQARNTSYFVEWIPNNVKSSICDIPPRGLKMAATFIGNTTAFRELFTRVDGQLQKMYARRAFI
		Trichomitus_batrachorum_2              IGAKFWEVISDEHGIDPTGSYHGDSDLQLERINVYYNEATGGKYVPRAVLVDLEPGTMDSVRAGQYGQLFRPDNFVFGQSGAGNNWAKGYYTEGQELCESILDVIRKEAESCDALQGFQLVHSLGGGTGSGLGTLLLNKLREEYPDRILSTYSIVPSPKVSDTVVEPYNCTLSVHQLVESADEVFCIDNEALYDICFRTLKLTTPTYGDLNHLVSMVMSDTTCALRFPGQLNSDLRKLAVNLVPFPRLHFFICGFAPLTSRGSQQYRALTVPELTSQLFDNKNMMAACDPRRGVYLTVSAHFRGRMSSKEVDEQMLNIQARNTSYFVEWIPNNVKSSICDIPPRGLKMAATFIGNTTAFRELFTRVDGQFQKMYARRAFI
		Hypotrichomonas_acosta_2               IGAKFWEVVSDEHGIDPTGSYHGDSDLQLERINVYYNEATGGKYVPRAVLVDLEPGTMDSVRAGQYGQLFRPDNFVFGQSGAGNNWAKGYYTEGQELCESILDVVRKEAESCDALQGFQLVHSLGGGTGAGLGTLLLNKLREEYPDRILSTYSIVPSPKVSDTVVEPYNCTLSVHQLVESADEVFCIDNEALYDICFRTLKLTTPTYGDLNHLVSMVMSGTTCSLRFPGRLNSDLRKLAVNLVPFPRLHFSIVGFAPLTSRGSQQYRALTVPELTSQLFDNKNMMAACDPRRGVYLTVSAHFRGRMSSKEVDEQMLNIQARNTSYFVEWIPSNVKSSITDIPPRGLKMAATFIGNTTAFRELFTRVDSQFQKMYARRAFI
		Hypotrichomonas_acosta_3               IGAKFWEVVSDEHGIDPTGSYHGDSDLQLERINVYYNEATSGKYVPRAVLVDLEPGTMDSVRAGQYGQLFRPDNFVFGQSGAGNNWAKGYYTEGQELCESILDVVRKEAESCDALQGFQLVHSLGGGTGAGLGTLLLNKLREEYPDRILSTYSIVPSPKVSDTVVEPYNCTLSVHQLVESADEVFCIDNEALYDICFRTLKLTTPTYGDLNHLVSMVMSGTTCSLRFPGQLNSDLRKLAVNLVPFPRLHFFIVGFAPLTSRGSQQYRALTVPELTSQLFDNKNMMAACDPRRGVYLTVSAHFRGRMSSKEVDEQMLNIQARNTSYFVEWIPSNVKSSITDIPPRGLKMAATFIGNTTAFRELFTRVDSQFQKMYARRAFI
		Trichomonas_vaginalis                  IGAKFWEVISDEHGIDPTGSYHRDSDLQLERINVYYNEATGAKYVPRAILVDLEPGTSESVRAGQFGQLFRPDNFVFGQSGAGNNWAKGYYTEGQELCESILDVIRKEAESCDCLQGFQLVHSLGGGTGAGLGTLLLNKLREEYPDRILSTYSIVPSPKVSDTVVEPYNCTLSVHQLVESADEVFCIDNEALYDICFRTLKLTTPTYGDLNHLVSMVMSGTTCALRFPGQLNSDLRKLAVNLVPFPRLHFFIVGFAPLTSRGSQQYRALTVPELTSQLFDNKNMMAACDPRRVSYLT-SAHFRGRMSSKEVDEQMLNIQARNTSYFVEWIPSNVKSAICDIPPRGLKMAATFIGNTTAFRELFTRVDSQFQKMYARRAFI
		Tetratrichomonas_gallinarum_1          IGAKFWEVISDEHGIDPTGSYHGDSDLQLERINVYFNEATGGKYVPRAILVDLEPGTMDSVRAGQYGQLFRPDNFVFGQSGAGNNWAKGYYTEGQELCESILDVIRKEAESCDALQGFQLVHSLGGGTGAGLGTLLLNKLREEYPDRILCTYSIVPSPKVSDTVVEPYNCTLSVHQLVESADEVFCIDNEALYDICLRTLKLTTPTYGDLNHLVSMVMSGSTCSLRFPGQLNSDLRKLAVNLVPFPRLHFFIVGFAPLTSRGSQQYRALTVPELTSQLFDNKNMMAACDPRRGVYLTCSAHFRGRMSSKEVDEQMLNIQARNTSYFVEWIPSNVKCAICDIPPRGLKMAATFIGNTTAFRELFTRVDSQFQKMYARKAFI
		Tetratrichomonas_gallinarum_2          IGAKFWEVISDEHGIDPTGSYHGDSDLQLERINVYFNEATGGKYVPRAILVDLEPGTMDSVRAGQYGQLFRPDNFVFGQSGAGNNWAKGYYTEGQELCESILDVIRKEAESCDALQGFQLVHSLGGGTGAGLGTLLLNKLREEYPDRILCTYSIVPSPKVSDTVVEPYNCTLSVHQLVESADEVFCIDNEALYDICFRTLKLTTPTYGDLNHLVSMVMSGSTCSLRFPGQLNSDLRKLAVNLVPFPRLHFFIVGFAPLTSRGSQQYRALTVPELTSQLFDNKNMMAACDPRRGVYLTCSAHFRGRMSSKEVDEQMLNIQARNTSYFVEWIPSNVKCAICDIPPRGLKMAATFIGNTTAFRELFTRVDSQFQKMYARKAFI
		Tetratrichomonas_gallinarum_3          IGAKFWEVISDEHGIDPTGSYHGDSDLQLERINVYFNEATGGKYVPRAILVDLEPGTMDSVRAGQYGQLFRPDNLVFGQSGAGNNWAKGYYTEGQELCESILDVIRKEAESCDALQGFQLVHSLGGGTGAGLGTLLLNKLREEYPDRILCTYSIVPSPKVSDTVVEPYNCTLSVHQLVESADEVFCIDNEALYDICFRTLKLTTPTYGDLNHLVSMVMSGSTCSLRFPGQLNSDLRKLAVNLVPFPRLHFFIVGFAPLTSRGSQQYRALTVPELTSQLFDNKNMMAACDPRRGVYLTCSAHFRGRMSSKEVDEQMLNIQARNTSYFVEWIPSNVKCAICDIPPRGLKMAATFIGNTTAFRELFTRVDSQFQKMYARKAFI
		Devescovina_sp._D14                    IGAKFWEVISDEHGIDPTGSYHGDSDLQLERINVYYNEATGGKYVPRAILVDLEPGTMDSVRAGQYGQLFRPDNFVFGQSGAGNNWAKGYYTEGQELAESILDVIRKEAESCDALQGFQLVHSLGGGTGSGLGTLLLNKLREEYPDRILSTYSIVPSPKVSDTVVEPYNCTLSVHQLVESADEVFCIDNEALYDICFRTLKLTTPTYGDLNHLVSMVMSGTTCALRFPGQLNADLRKLAVNLVPFPRLHFFICGFAPLTSRGSQQYRALTVPELTSQLFDNKNMMAACDPRRGVYLTVSAHFRGRMSSKEVDEQMLNIQARNTSYFVEWIPNNVKSSICDIPPRGLKMASTFIGNTTAFRELFTRVDNQFSKMYARRAFI
		Devescovina_sp._D16                    IGAKFWEVISDEHGIDPTGSYHGDSDLQLERINVYYNEATGGKYVPRAILVDLEPGTMDSVRAGQYGQLFRPDNFVFGQSGAGNNWAKGYYTEGQELAESILDVIRKEAESCDALQGFQLVHSLGGGTGSGFGTLLLNKLREEYPDRILSTYTIVPSPKVSDTVVEPYNCTLSVHQLVESADEVFCIDNEALYDICFRTLKLTTPTYGDLNHLVSMVMSGTTCALRFPGQLNADLRKLAVNLVPFPRLHFFICGFAPLTSRGSQQYRALTVPELTSQLFDNKNMMAACDPRRGVYLTVSAHFRGRMSSKEVDEQMLNIQARNTSYFVEWIPNNVKSSICDIPPRGLKMASTFIGNTTAFRELFTRVDNQFSKMYARRAFI
		Stephanonympha_sp._St20                IGAKFWEVISDEHGIDPTGSYHGDSDLQLERINVYYNEATGGKYVPRAILVDLEPGTMDSVRAGQYGQLFRPDNFVFGQSGAGNNWAKGYYTEGQELCESILDVIRKEAESCDALQGFQLVHSLGGGTGSGLGTLLLNKLREEYPDRILSTYSIVPSPKVSDTVVEPYNCTLSVHQLVESADEVFCIDNEALYDICFRTLKLTTPTYGDLNHLVSMVMSGTTCSLRFPGQLNADLRKLAVNLVPFPRLHFFICGFAPLTSRGSQQYRALTVPELTSQLFDNKNMMAACDPRRGVYLTVSAHFRGRMSSKEVDEQMLNIQARNTSYFVEWIPNNVKSSICDIPPRGLKMAATFIGNTTAFRELFTRVDSQFSKMYARRAFI
		Stephanonympha_sp._St19                IGAKFWEVISDEHGIDPTGSYHGDSDLQLERINVYYNEATGGKYVPRAILVDLEPGTMDSVRAGQYGQLFRPDNFVFGQSGAGNNWAKGYYTEGQEPCESILDVIRKEAESCDALQGFQLVHSLGGGTGSGLGTLLLNKLREEYPDRILSTYSIVPSPKVSDTVVEPYNCTLSVHQLVESADEVFCIDNEALYDICFRTLKLTTPTYGDLNHLVSMVMSGTTCSLRFPGQLNADLRKLAVNLVPFPRLHFFICGFAPLTSRGSQQYRALTVPELTSQLFDNKNMMAACDPRRGVYLTVSAHFRGRMSSKEVDEQMLNIQARNTSYFVEWIPNNVKSSICDIPPRGLKMAATFIGNTTAFRELFTRVDSQFSKMYARRAFI
	;
END;