#NEXUS [written Sat Mar 05 00:54:19 SGT 2016 by Mesquite version 3.03 (build 702) at MesemiteAir.local/10.0.1.21 (William Piel)] BEGIN TAXA; TITLE Taxa; DIMENSIONS NTAX=13; TAXLABELS Penicillium_brocae_CBS_116113T Penicillium_lilacinoechinulatum_CBS_45493T Penicillium_amaliae_CBS_134209T Penicillium_restingae_URM_7072 Penicillium_restingae_URM_7070 Penicillium_restingae_URM_7075T Penicillium_adametzii_CBS_20928T Penicillium_arianeae_CBS_134559T Penicillium_adametzioides_CBS_31359T Penicillium_bilaiae_NRRL_3391T Penicillium_jugoslavicum_CBS_19287T Penicillium_multicolor_CBS_50173T Penicillium_sp._Unnamed_Taxon ; END; BEGIN CHARACTERS; TITLE Penicillium_restingae_sp._nov._BTUB_CMD_ITS; DIMENSIONS NCHAR=1230; FORMAT DATATYPE = DNA GAP = - MISSING = ?; MATRIX Penicillium_brocae_CBS_116113T TTTTACTAACTATCTTCAAGGCAGAACATTGCTTCCGAGCACGGCCTCGACGGCGATGGCCAGTAAG-TTCC-TTATTCGACTCGAATGGATGATAC-GATGGGAATGGCGGTCTGATA----TTTT-CTAGCTTCACCGGTTCCTCCGACCTCCAGCTGGAGCGTATGAACGTCTACTTCAACCACGTAAGTATGACATTGATACCTG-GTAATATTCGACATCGTCTCATATAATGCG-TGTT--TAGGCCAGCGGTGACCGCTACGTTCCCCGTGCCGTTCTGGTTGATCTGGAGCCCGGTACCATGGACGCCGTCCGTGCCGGTCCATACTAATGGATAC-TTT-TCCC--GGTAATAGGACAAGGATGGCGATGGTGAGTGCGACCGTCTTCGATACCGATGA--TTTT-AGATGCGATCACGCCTG-ATTTATCGATTGAACAAATAACTGAGACGAAT-AAACTCGACAGGCCAGATTACCACCAAGGAGCTGGGCACTGTCATGCGCTCCCTCGGCCAGAACCCCTCCGAGTCTGAGTTGCAGGACATGATTAACGAGGTTGACGCTGATAACAACGGAACCATTGACTTCCCTGGTACGACCGTCCTTCCCTTCGAACGA----TTCAAGCTCC------------AGACCCATATTAACATGC-GACACAGAGTTCCTTACCATGATGGCACGTAAGATGAAGGACACCGACTCCGAGGTCC-AACCTCCCACCCGTG-TTTACCGTACCCTGTTGCTTCGGCGCGCCCGCCCTCGCGGCCGCCGGGGGGCCTCCGCCCCCGGGCCCGTGCCCGCCGAAGACACCC-CTGAACGCTGTCTGAAGATTGTCGTCTGAGCGAATAGCGAAAAA-TAAGTTAAAACTTTCAACAACGGATCTCTTGGTTCCGGCATCGATGAAGAACGCAGCGAAATGCGATAACTAATGTGAATTGCAGAATTCAGTGAATCATCGAGTCTTTGAACGCACATTGCGCCCCCTGGTATTCCGGGGGGCATGCCTGTCCGAGCGTCATTGCTGCCCTCAAGCCCGGCTTGTGTGTTGGGCCGCCGTCCCCCCCTTCCCGGGGGGACGGGCCCGAAAGGCAGCGGCGGCACCGCGTCCGGTCCTCGAGCGTATGGGGCTCTGTCACCCGCTCTGCAGGCCCGGCCGGC-GCCA-GCCGACCCCCCATCATCCTTTTTTTTCAGGTTGACCTCGG Penicillium_lilacinoechinulatum_CBS_45493T TTGTACTAACTACCTCTCAGGCAGAACATTGCCAGTGAGCACGGCCTCGATGGCGATGGCCAGTAAG-TTCC-ATTATCGACTCAATTGGATTATAT-GGTGGGAATGGCGGTCTGATA----TTTTACTAGCTTCACCGGTTCCTCCGACCTCCAGTTGGAGCGTATGAACGTCTACTTCAACCACGTAAGTGTGACATTAATATCTT-GAACCATTCGACCTTGTCTAACATGCCGAA-CTTTCATAGGCCAGCGGTGACCGCTACGTTCCCCGTGCCGTCCTGGTTGATCTGGAGCCCGGTACCATGGACGCTGTCCGTGCCGGTCCATACTAATGGATAC-TTT-CCCC--GGTAACAGGACAAGGATGGCGATGGTGAGTGCGGTCGTCTTCGATATCGATGA--TTTT-AGATCCGATTGTGCCTT-CTTTACCGAGTGAACAAATAACTGAGACGAAT-GAACTTGATAGGCCAGATCACTACCAAAGAGCTGGGCACTGTCATGCGCTCCCTCGGCCAGAACCCCTCCGAGTCCGAGCTGCAGGACATGATTAACGAGGTTGACGCCGATAACAACGGAACCATTGACTTCCCTGGTACGAATCCCCTTCCCCTCGATCGT----TTCAAGCTTC------------AGACCCGTATTGACATGC-GACATAGAGTTCCTTACCATGATGGCGCGTAAGATGAAGGACACCGACTCCGAGGTCC-AACCTCCCACCCGTG-TTTACCGTACCATGTTGCTTCGGCAGGCCCG-CCTCACGGCCGCCGGGGGGCCTCTGCCCCCGGGCCCGCGCCTGCCGAAGACCCCC-CTGAACGCTGTCTGAAGATTGCAGTCTGAGCGATT-A-GCGAAA-TTAATTAAAACTTTCAACAACGGATCTCTTGGTTCCGGCATCGATGAAGAACGCAGCGAAATGCGATAACTAATGTGAATTGCAGAATTCAGTGAATCATCGAGTCTTTGAACGCACATTGCGCCCCCTGGTATTCCGGGGGGCATGCCTGTCCGAGCGTCATTGCTGCCCTCAAGCACGGCTTGTGTGTTGGGCCTCCGTCCCCC--CGCCCCGGGGGACGGGCCCGAAAGGCAGCGGCGGCACCGTGTCCGGTCCTCGAGCGTATGGGGCTTTGTCACCCGCTCTGTAGGCCCGGCCGGC-GCCT-GCCGACCCCCAATCATCCTTTTTTTTCAGGTTGACCTCGG Penicillium_amaliae_CBS_134209T TTGTACTAACTATCTCTCAGGCAGAACATTGCCAGTGAGCACGGCCTCGACGGCGATGGCCAGTAAG-TTCC-TTTATCGACTCGATTGGATTATAT-GGTGGGAATGGCGGTCTAATA----TTTC-CTAGCTTCACTGGTTCCTCCGACCTCCAGTTGGAGCGTATGAACGTCTACTTCAACCACGTAAGTGTGATATTGATATCAT-GAACCATTCGACCTTGTCTAACGTGCCGGA-TTTTCATAGGCCAGCGGTGACCGCTACGTTCCCCGTGCCGTCTTGGTTGATCTGGAGCCCGGTACCATGGACGCTGTCCGTGCCGGTCCATACTAATGGGTGC-TTT-TCCC--GGTAACAGGACAAGGATGGCGATGGTGAGTGCGATCGTCTTCGATATCGATGATTTTTT-AAATCTGATTGTGTCCT-CTTTATCGAGTGAACAAATAACTGAGACGAAT-GAATTTGATAGGCCAGATCACTACCAAGGAGCTGGGCACTGTCATGCGCTCCCTCGGCCAGAACCCCTCCGAGTCTGAGCTGCAGGACATGATTAACGAGGTTGACGCCGATAACAACGGAACCATTGACTTCCCTGGTACGAATCTCCTTCCCCTCGATCGT----TTCAAGCTTC------------AGACCCGTATTGACATGC-GACATAGAGTTCCTTACCATGATGGCGCGTAAGATGAAGGACACCGACTCCGAGGTCC-AACCTCCCACCCGTG-TTTACTGTACCATGTTGCTTCGGCAGGCCCG-CCTCACGGCCGCCGGGGGGCCTCTGCCCCCGGGCCCGCGCCTGCCGAAGAC-CCC-CTGAACGCTGTCTGAAGATTGCAGTCTGAGCGATT-A-GCGAAA-TTAATTAAAACTTTCAACAACGGATCTCTTGGTTCCGGCATCGATGAAGAACGCAGCGAAATGCGATAACTAATGTGAATTGCAGAATTCAGTGAATCATCGAGTCTTTGAACGCACATTGCGCCCCCTGGTATTCCGGGGGGCATGCCTGTCCGAGCGTCATTGCTGCCCTCAAGCACGGCTTGTGTGTTGGGCCTCCGTCCCCC----ACCCGGGGGACGGGCCCGAAAGGCAGCGGCGGCACCGTGTCCGGTCCTCGAGCGTATGGGGCTTTGTCACCCGCTCTGTAGGCCCGGCCGGC-GCCT-GCCGACCCCCAATCATCCTTTTTTTTCAGGTTGACCTCGG Penicillium_restingae_URM_7072 TTTTACTAACTATCTCTCAGGCAGAACATTGCCAGTGAGCACGGCCTCGATGGCGATGGCCAGTAAGTTTCT-CGAATGAAGTTGATTGGATTGTGT-GGTGGGAATGGCAGTCTGATG----TTTT-CTAGCTTCACCGGTTCTTCCGACCTCCAGCTGGAGCGTATGAACGTCTACTTCAACCATGTAAGTGTGGCATTGATATATT-AATTCATTCGACCCGGTCTAATGCGTTGGA-TTTTCATAGGCCAGCGGTGACCGCTACGTTCCCCGTGCCGTCCTGGTTGACTTGGAGCCTGGTACCATGGACGCTGTCCGTGCCGGTCC------------------------------CAGGACAAGGATGGCGATGGTGAGTGCGATCGTCTTCAA------TGA--CTTT-CGATCGGATTGTGCTCT-GTCCATTGAGCGACCGAATAACTGAGACGAATGAAATTCAACAGGCCAGATCACTACTAAGGAGCTGGGCACTGTCATGCGCTCCCTCGGCCAGAACCCCTCCGAATCCGAGCTGCAGGATATGATCAACGAGGTCGACGCCGATAACAACGGTACCATTGACTTCCCTGGTACGATATGCCTCCCCTACATTCAAGAACTCTAAGACCA------ATCTTGGGACTCGTATTGACATGC-GACGCAGAGTTCCTTACCATGATGGCACGTAAGATGAAGGACACCGACTCCGAGGTCCCAACCTCCCACCCGTGTTTTATTGTACCTTGTTGCTTCGGCAGGCCCG-CCTCACGGCCGCCGGGGGGCCTCCGCCCCCGGGCCCGTGCCTGCCGAAGACCCCT-TTGAACGCTGTCTGAAGTTTGCAGTCTGAGCGAAT-A-GCAAAAATTTGTTAAAACTTTCAACAACGGATCTCTTGGTTCCGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAGTCTTTGAACGCACATTGCGCCCCCTGGTATTCCGGGGGGCATGCCTGTCCGAGCGTCATTGCTGCCCTCAAGCACGGCTTGTGTGTTGGGCCTCCGTCCCCC---TCCCCGGGGGACGGGCCCGAAAGGCAGCGGCGGCACCGTGTCCGGTCCTCGAGCGTATGGGGCTTTGTCACCCGCTCTGTAGGCCCGGCCGGC-GCCT-GCCGACCCTC-ATCATCC--TTTCTTCAGG---------- Penicillium_restingae_URM_7070 TTTTACTAACTATCTCTCAGGCAGAACATTGCCAGTGAGCACGGCCTCGATGGCGATGGCCAGTAAGTTTCT-CGAATGAAGTTGATTGGATTGTGT-GGTGGGAATGGCAGTCTGATG----TTTT-CTAGCTTCACCGGTTCTTCCGACCTCCAGCTGGAGCGTATGAACGTCTACTTCAACCATGTAAGTGTGGCATTGATATATT-AATTCATTCGACCCGGTCTAATGCGTTGGA-TTTTCATAGGCCAGCGGTGACCGCTACGTTCCCCGTGCCGTCCTGGTTGACTTGGAGCCTGGTACCATGGACGCTGTCCGTGCCGGTCC------------------------------CAGGACAAGGATGGCGATGGTGAGTGCGATCGTCTTCAA------TGA--CTTT-CGATCGGATTGTGCTCT-GTCCATTGAGCGACCGAATAACTGAGACGAATGAAATTCAACAGGCCAGATCACTACTAAGGAGCTGGGCACTGTCATGCGCTCCCTCGGCCAGAACCCCTCCGAATCCGAGCTGCAGGATATGATCAACGAGGTCGACGCCGATAACAACGGTACCATTGACTTCCCTGGTACGATATGCCTCCCCTACATTCAAGAACTCTAAGACCA------ATCTTGGGACTCGTATTGACATGC-GACGCAGAGTTCCTTACCATGATGGCACGTAAGATGAAGGACACCGACTCCGAGGTCCCAACCTCCCACCCGTGTTTTATTGTACCTTGTTGCTTCGGCAGGCCCG-CCTCACGGCCGCCGGGGGGCCTCCGCCCCCGGGCCCGTGCCTGCCGAAGACCCCT-TTGAACGCTGTCTGAAGTTTGCAGTCTGAGCGAAT-A-GCAAAAATTTGTTAAAACTTTCAACAACGGATCTCTTGGTTCCGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAGTCTTTGAACGCACATTGCGCCCCCTGGTATTCCGGGGGGCATGCCTGTCCGAGCGTCATTGCTGCCCTCAAGCACGGCTTGTGTGTTGGGCCTCCGTCCCCC---TCCCCGGGGGACGGGCCCGAAAGGCAGCGGCGGCACCGTGTCCGGTCCTCGAGCGTATGGGGCTTTGTCACCCGCTCTGTAGGCCCGGCCGGC-GCCT-GCCGACCCTC-ATCATCC--TTTCTTCAGG---------- Penicillium_restingae_URM_7075T TTTTACTAACTATCTCTCAGGCAGAACATTGCCAGTGAGCACGGCCTCGATGGCGATGGCCAGTAAGTTTCT-CGAATGAAGTTGATTGGATTGTGT-GGTGGGAATGGCAGTCTGATG----TTTT-CTAGCTTCACCGGTTCTTCCGACCTCCAGCTGGAGCGTATGAACGTCTACTTCAACCATGTAAGTGTGGCATTGATATATT-AATTCATTCGACCCGGTCTAATGCGTTGGA-TTTTCATAGGCCAGCGGTGACCGCTACGTTCCCCGTGCCGTCCTGGTTGACTTGGAGCCTGGTACCATGGACGCTGTCCGTGCCGGTCC------------------------------CAGGACAAGGATGGCGATGGTGAGTGCGATCGTCTTCAA------TGA--CTTT-CGATCGGATTGTGCTCT-GTCCATTGAGCGACCGAATAACTGAGACGAATGAAATTCAACAGGCCAGATCACTACTAAGGAGCTGGGCACTGTCATGCGCTCCCTCGGCCAGAACCCCTCCGAATCCGAGCTGCAGGATATGATCAACGAGGTCGACGCCGATAACAACGGTACCATTGACTTCCCTGGTACGATATGCCTCCCCTACATTCAAGAACTCTAAGACCA------ATCTTGGGACTCGTATTGACATGC-GACGCAGAGTTCCTTACCATGATGGCACGTAAGATGAAGGACACCGACTCCGAGGTCCCAACCTCCCACCCGTGTTTTATTGTACCTTGTTGCTTCGGCAGGCCCG-CCTCACGGCCGCCGGGGGGCCTCCGCCCCCGGGCCCGTGCCTGCCGAAGACCCCT-TTGAACGCTGTCTGAAGTTTGCAGTCTGAGCGAAT-A-GCAAAAATTTGTTAAAACTTTCAACAACGGATCTCTTGGTTCCGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAGTCTTTGAACGCACATTGCGCCCCCTGGTATTCCGGGGGGCATGCCTGTCCGAGCGTCATTGCTGCCCTCAAGCACGGCTTGTGTGTTGGGCCTCCGTCCCCC---TCCCCGGGGGACGGGCCCGAAAGGCAGCGGCGGCACCGTGTCCGGTCCTCGAGCGTATGGGGCTTTGTCACCCGCTCTGTAGGCCCGGCCGGC-GCCT-GCCGACCCTC-ATCATCC--TTTCTTCAGG---------- Penicillium_adametzii_CBS_20928T TTTTACTTACTACCTCTTAGGCAGAACATTGCCAGTGAGCACGGCCTCGATGGCGATGGCCAGTAAGTTTCT-CGATT-AAGTCGATTGGGTTATGT-GGTGGGAATGGCGGTCTGATG----TTTT-CTAGCTTCACCGGTTCCTCCGACCTCCAGCTGGAGCGTATGAACGTCTACTTCAACCACGTAAGTATGACATTGATATATT-GAATAATTCGACCCTGTCTAATATTTTTGA-TTTTCACAGGCCAGCGGTGACCGCTATGTTCCCCGTGCCGTCCTGGTCGACTTGGAGCCCGGTACCATGGACGCTGTCCGTGCCGGTCCATACTAATGGATAC-TTT-TCCC--GGTAACAGGACAAGGATGGCGATGGTGAGTGCGATCGTCTTCGA------TGA--CTTC-AGATCAGATTGTGCTCT-CTCCATTGAGCGAACGAATAACTAAGACGAATAAAATTCAACAGGCCAGATCACTACCAAGGAGCTGGGCACTGTCATGCGCTCTCTCGGCCAGAACCCCTCCGAGTCCGAGCTGCAGGATATGATCAACGAGGTCGACGCCGATAATAACGGTACAATTGACTTCCCTGGTACGATATGCCTCCCCTATATTCAAGAAACCCAA-------------CCTAGGACTCGTATTGACATGC-GACACAGAGTTCCTTACCATGATGGCGCGTAAGATGAAGGATACCGACTCCGAGGTCC-AACCTCCCACCCGTGTTTTATTGTACCTTGTTGCTTCGGCAGGCCCG-CCTCACGGCCGCCGGGGGGCCTCTGCCCCCGGGCCCGCGCCTGCCGAAGACACCC-TTGAACGCTGTCTGAAGTTTGCAGTCTGAGCGAAA-A-GCAAAA-TTTATTAAAACTTTCAACAACGGATCTCTTGGTTCCGGCATCGATGAAGAACGCAGCGAAATGCGATAACTAATGTGAATTGCAGAATTCAGTGAATCATCGAGTCTTTGAACGCACATTGCGCCCCCTGGTATTCCGGGGGGCATGCCTGTCCGAGCGTCATTGCTGCCCTCAAGCACGGCTTGTGTGTTGGGCCTCCGTCCCCC----ACCCGGGGGACGGGCCCGAAAGGCAGCGGCGGCACCGTGTCCGGTCCTCGAGCGTATGGGGCTTTGTCACCCGCTCTGTAGGCCCGGCCGGC-GCCT-GCCGACCCTC-ATCATCC--TTTTTTCAGGTTGACCTCGG Penicillium_arianeae_CBS_134559T TTTTACTAACTATCTTTCAGGCAGAACATTGCCAGTGAGCACGGCCTCGATGGCGATGGCCAGTAAGTTCCT-TGGATCGACCGGATTGCATTCTGTGGGTGGGAATGGCGGTCTGATT-TTTTTTT-ATAGCTTCACCGGCTCTTCTGACCTCCAGCTGGAGCGTATGAACGTCTACTTCAACCACGTAAGTGTGGCATCGATATCTT-GAATCATTCGACATTGTCTAATATCATGGA-TTTTCATAGGCCAGCGGTGACCGCTATGTTCCCCGTGCCGTCCTGGTTGATCTGGAGCCCGGTACCATGGATGCTGTCCGTGCCGGTCCATGCTAATGCATAC-TTTCCCCC--GGTGACAGGACAAGGATGGCGATGGTGAGTGCGATCGTCTTCGATACCGATGA--CTTT-AGATCCGATCGTGCCCT-ATTCATTGGGTAACCGCATAACTGAGACGAAT-AAATTTGATAGGCCAGATCACTACCAAGGAGTTGGGCACTGTCATGCGCTCCCTTGGCCAGAACCCCTCCGAGTCCGAGCTGCAGGACATGATCAACGAGGTCGACGCCGATAACAACGGTACCATTGACTTCCCTGGTACGAACTCGCTTTCCTTCGAGCAA----CCCAAGCTTC-----------AAGACTCGTATTGACATGC-GACACAGAGTTCCTTACCATGATGGCGCGTAAGATGAAGGACACCGACTCCGAGGTCC-AACCTCCCACCCGTG-TTTACTGTACCCTGTTGCTTCGGCGGGCCCG-CCTCACGGCCGCCGGGGGGCCTCTGCCCCCGGGCCTGTGCCTGCCGAAGACCCCC-CTGAACGCTGTCTGAAGATTGCAGTCTGAGCGGTT-A-GCGAAT-TTAGTTAAAACTTTCAACAACGGATCTCTTGGTTCCGGCATCGATGAAGAACGCAGCGAAATGCGATAACTAATGTGAATTGCAGAATTCAGTGAATCATCGAGTCTTTGAACGCACATTGCGCCCCCTGGTATTCCGGGGGGCATGCCTGTCCGAGCGTCATTGCTGCCCTCAAGCCCGGCTTGTGTGTTGGGTCTTCGTCCCCC-CCACCCGGGGGGACGGGCCCGAAAGGCAGTGGCGGCACCGCGTCCGGTCCTCGAGTGTATGGGGCTCTGTCACTCACTCCGTAGGCCTGGCCGGT-GCCC-GCCGACCCCCCGTCTTCC-TTTTTTCCAGGTTGACCTCGG Penicillium_adametzioides_CBS_31359T TTTTACTAACTACCCTCTAGGCAGAACATTGCCTCCGAGCACGGTCTTGATGGCGATGGACAGTAAGTTCTT-TGATTCGAGTCGATTGGTATATAT-GGTGGGAATGGCGGTCTGATA-TTTTTTT-CTAGCTTCACCGGCCAGTCCGACCTCCAGCTGGAGCGTATGAACGTCTACTTCAACCACGTAAGTGTGGAATTGATCCCTC-GAGCCATTCGATATTGGCTAATATTTGGAT-TGTTTATAGGCCAGCGGTGACCGTTACGTTCCCCGTGCCGTCCTGGTCGATTTGGAGCCCGGTACCATGGACGCTGTCCGTGCCGGTCCAGACTAATGGATACTTTT-TCCC--GGTAACAGGACAAGGATGGCGATGGTGAGTGCGATCGTTATCAAGCTCGATGA--TTTG-AGGACCGATTATGTCTT-CTATGTTGAGCGAACGAATAACTGAGACGAAT-ACACTCGATAGGACAAATCACCACCAAGGAGCTGGGCACTGTCATGCGCTCCCTCGGTCAGAACCCCTCCGAGTCCGAGCTGCAGGACATGATCAACGAGGTCGACGCCGATAACAACGGTACCATTGACTTCCCTGGTACGATTTCCCTCCCCTCCGAATAA----CCCAAGCCTC---------GAAACACTCGTATTGATATGTGGACACAGAGTTCCTTACCATGATGGCGCGTAAGATGAAGGACACCGACTCCGAGGTCC-AACCTCCCACCCGTG-TCTATTGTACCATGTTGCTTCGGCAGGCCCG-CCTTATGGCCGCCGGGGGCTAACCG-CCCCGGGCCCGCGCCTGCCGAAGACCCCT-CTGAACGCTGTCTGAAGATTGCCGTCTGAGCGAAACA-TATAAA-TTATTTAAAACTTTCAACAACGGATCTCTTGGTTCCGGCATCGATGAAGAACGCAGCGAAATGCGATAACTAATGTGAATTGCAGAATTCAGTGAATCATCGAGTCTTTGAACGCACATTGCGCCCTCTGGTATTCCGGAGGGCATGCCTGTCCGAGCGTCATTGCTGCCCTCAAGCCCGGCTTGTGTGTTGGGTCTCGTCCCCCC-------CGGGGGACGGGCCCGAAAGGCAGCGGCGGCACCGTGTCCGGTCCTCGAGCGTATGGGGCTTTGTCACCCGCTCTGTAGGCCCGGCCGGC-GCCT-GTCGACCCCCAATCTA---TTTTTTTCAGGTTGACCTCGG Penicillium_bilaiae_NRRL_3391T TTTTACTGACTACCTTCCAGGCAGAACATTGCCTCCGAGCACGGTCTCGATGGCGATGGACAGTAAG-TCTCGATCATCGACTCGATTGAATGAAGT-GGTGGGAATGGCGGTCTGATA---TTTTT-CTAGCTTCACCGGTTCCTCCGACCTCCAGCTGGAGCGTATGAACGTCTACTTCAACCACGTAAGTGTGGCATTGATATCCC-GAGTCACTCGAACACGGCTAATATGTCGGGTTTTTTATAGGCCAGCGGTGACCGCTACGTTCCCCGTGCCGTCCTAGTCGATCTGGAGCCTGGTACCATGGACGCTGTCCGTGCCGGTCCACACTAATGGATGC-TTT-TTCCCGGGAAATAGGACAAGGATGGCGATGGTGAGTGCGATCGTACTCGGGCTCGATAA--TTTCAAGATCCGATTATGTCCT-CTTGACCGAGTGAACAAATCACTGAGATGAAT-AAATTCGATA-GACAAATCACCACCAAGGAGCTGGGCACTGTCATGCGCTCCCTCGGCCAGAACCCTTCCGAGTCTGAGCTGCAGGATATGATCAACGAGGTCGACGCCGATAATAACGGTACCATCGATTTTCCTGGTACGCTCTCCCTCCCCTCCGAATGATGATCTCAAAGCCC--------GAGAAGACTGATATTGACATTGCGACACAGAGTTCCTTACCATGATGGCACGTAAGATGAAGGACACCGACTCCGAGGTCC-AACCTCCCACCCGTG-TCTCTTGTACCATGTTGCTTCGGCGAGCCCG-CCTCACGGCCGCCGGGGGGCATCTGCCCCCGGGCCCGCGCCCGCCGAAGCCCCCT-CTGAACGCTGTCTGAAGATTGCAGTCTGAGCGATAAG-CAAAAA-TTATTTAAAACTTTCAACAACGGATCTCTTGGTTCCGGCATCGATGAAGAACGCAGCGAAATGCGATAACTAATGTGAATTGCAGAATTCAGTGAATCATCGAGTCTTTGAACGCACATTGCGCCCCCTGGTATTCCGGGGGGCATGCCTGTCCGAGCGTCATTGCTGCCCTCAAGCACGGCTTGTGTGTTGGGCCTCCGTCCTCC---CCCCGGGGGGACGGGCCCGAAAGGCAGCGGCGGCACCGTGTCCGGTCCTCGAGCGTATGGGGCTTTGTCACCCGCTCTGTAGGCCCGGCCGGC-GCTG-GCCGACCCTCCAACCCCA--TTTTTTCAGGTTGACCTCGG Penicillium_jugoslavicum_CBS_19287T TTTTACTGACTACTCTATAGGCAGAACATTGCCAGCGAGCACGGTCTCGACGGCGATGGCCAGTAAG-TTTC--TC-TCGACTCGATTGGATTCAGT-GGTGGGAATGGCGGTCTGATATTTTTTTT-CTAGCTTCACCGGCCAATCCGACCTCCAGCTGGAGCGTATGAACGTCTACTTCAACCACGTAAGTGTGGCTTCGATACCTTGGAGTTATTTGACATGGACTAATATGCTGTG-TTTTCACAGGCCAGCGGTGACCGCTACGTTCCCCGTGCCGTCCTGGTTGATCTGGAGCCTGGTACCATGGACGCTGTCCGTGCCGGTCCAGACTAATGGATAC-TTT-CCCC--GGTAACAGGACAAGGATGGCGATGGTGAGTGCGATTATCCTCGGTGCCAATGA--TTC---GACGCGATGCTGCCCTATCTTATCGAGTGAGCCCATAACTGAGACAACA-TAACTCGACAGGCCAGATCACTACCAAGGAGCTGGGCACTGTCATGCGCTCTCTCGGCCAGAACCCCTCCGAGTCCGAGCTGCAGGATATGATCAACGAAGTCGACGCCGATAACAACGGTACCATTGACTTTCCTGGTACGACTTTCCTTCCCCTCGAGTCC--ATCCCAAACCTC-------------CCCTTGTATTGACATGG-GATACAGAGTTCCTTACCATGATGGCGCGTAAGATGAAGGACACCGACTCCGAGGTCC-AACCTCCCACCCGTG-TCTCCTGTACCATGTTGCTTCGGCGGGCCCG-CCTCACGGCCGCCGGGGGGCCTCTGCCCCCGGGCCCGCGCCCGCCGAAGACCCCCTCTGAACGCTGTCTGAAGATTGCAGTCTGAGCGAAATA-GCAAAA-TTAATTAAAACTTTCAACAACGGATCTCTTGGTTCCGGCATCGATGAAGAACGCAGCGAAATGCGATAACTAATGTGAATTGCAGAATTCAGTGAATCATCGAGTCTTTGAACGCACATTGCGCCCCCTGGTATTCCGGGGGGCATGCCTGTCCGAGCGTCATTGCTGCCCTCAAGCCCGGCTTGTGTGTTGGGCCGCCGTCCCCC-CGCCCCGGGGGGACGGGCCCGAAAGGCAGCGGCGGCACCGTGTCCGGTCCTCGAGCGTATGGGGCTTTGTCACCCGCTCTGAAGGCCCGGCCGGC-GCTG-GCCGACCCCCAACCATTT-TTTTTTTCAGGTTGACCTCGG Penicillium_multicolor_CBS_50173T TCTTGCTAATTTTGTTATAGGCAGCAGATTGCTAGCGAGCACGGCCTCGACGGTGATGGACAGTGAG-TTTG-GATCACGGTCAATTC----------GTCCAGAACAGCGGTCTGATA--TTTTTC-TTAGCTTCACCGGTGCCTCCGACCTCCAGCTGGAGCGTATGAACGTCTACTTCAACCACGTAAGTTCA-CGTAAATGCGAGCAGAGCGGTCGAAATGTCTCTGACCTTTGTT-TACCTTTAGGCCAGCGGTGACCGTTACGTTCCCCGTTCCGTCTTGGTTGACTTGGAGCCCGGTACCATGGACGCTGTTCGTGCCGGTCCACGCAGCTAACCAT-GT--TATT--TTCAACAGGACAAGGATGGCGATGGTGAGTGC--------CCGA------CGA--CACC-AGACATAAAAGTCCCCC-AGCAATTGGAATCA-TTTTTACTGAGACGAA--ATGGTGATTAGGACAAATCACCACCAAGGAGCTTGGCACTGTCATGCGCTCGCTTGGCCAGAACCCCTCCGAGTCTGAGCTGCAGGACATGATCAACGAAGTCGACGCCGATAACAACGGCACCATTGATTTCCCCGGTACAAAATTGCTGCACCACCCCCTC----TCCGGCCCTTCTCAGCTGACCCGGACTGTTACTGATTTCG---ACTAGAATTCCTTACCATGATGGCCCGCAAGATGAAGGATACCGACTCAGAGGTCC-AACCTCCCACCCGTG-TTTATTGTACCTTGTTGCTTCGGCAGGCCCG-CCTCACGGCCGCCGGGGGGCTTCTGCCCCCGGGCCCGCGCCTGCCGGAGACAATC-TTGAACGCTGTCTGAAGAATGCAGTCTGAGCGATT-AAGCAAAA-TTAGTTAAAACTTTCAACAACGGATCTCTTGGTTCCGGCATCGATGAAGAACGCAGCGAAATGCGATAATTAATGTGAATTGCAGAATTCAGTGAATCATCGAGTCTTTGAACGCACATTGCGCCCCCTGGTATTCCGGGGGGCATGCCTGTCCGAGCGTCATTGCTGCCCTCAAGCCCGGCTTGTGTGTTGGGTCTTGTCCCCCC-----CCCGGGGGACAGGCCCGAAAGGCAGTGGCGGCACCG--TCCGATCCTCGAGCGTATGGGGCTTTGTCACCCGCTCTGTAGGCCCGGCCGGCTGC-TTGCCGACCCCCATCAATC---TTTTTTCAGGTTGACCTCGG Penicillium_sp._Unnamed_Taxon ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ; END; BEGIN TREES; Title Penicillium_restingae_sp._nov._BTUB_CMD_ITS; LINK Taxa = Taxa; TRANSLATE [0] 1 Penicillium_brocae_CBS_116113T, [1] 2 Penicillium_lilacinoechinulatum_CBS_45493T, [2] 3 Penicillium_amaliae_CBS_134209T, [3] 4 Penicillium_restingae_URM_7072, [4] 5 Penicillium_restingae_URM_7070, [5] 6 Penicillium_restingae_URM_7075T, [6] 7 Penicillium_adametzii_CBS_20928T, [7] 8 Penicillium_arianeae_CBS_134559T, [8] 9 Penicillium_adametzioides_CBS_31359T, [9] 10 Penicillium_bilaiae_NRRL_3391T, [10] 11 Penicillium_jugoslavicum_CBS_19287T, [11] 12 Penicillium_multicolor_CBS_50173T, [12] n12 Penicillium_sp._Unnamed_Taxon; TREE Fig._1 = (((((((9:0.07468068,10:0.05467333):0.02184781,11:0.06465084):0.01291322,1:0.07575145):0.00743836,8:0.06132658):0.0063522,(2:0.00916474,3:0.01262069):0.02352423):0.01738079,(7:0.01758679,(4:0.0,(5:0.0,6:0.0):0.0):0.02623426):0.0213811):0.0989282,12:0.23954125); END; BEGIN ASSUMPTIONS; TYPESET * UNTITLED (CHARACTERS = Penicillium_restingae_sp._nov._BTUB_CMD_ITS) = unord: 1 - 1230; END; BEGIN CODONS; CODESET * UNTITLED (CHARACTERS = Penicillium_restingae_sp._nov._BTUB_CMD_ITS) = universal: 1 - 1230; END; BEGIN MESQUITECHARMODELS; ProbModelSet * UNTITLED (CHARACTERS = Penicillium_restingae_sp._nov._BTUB_CMD_ITS) = 'Jukes-Cantor': 1 - 1230; END; Begin MESQUITE; MESQUITESCRIPTVERSION 2; TITLE AUTO; tell ProjectCoordinator; timeSaved 1457110459987; getEmployee #mesquite.minimal.ManageTaxa.ManageTaxa; tell It; setID 0 4455751177490901779; endTell; getEmployee #mesquite.charMatrices.ManageCharacters.ManageCharacters; tell It; setID 0 5599315089606765889; mqVersion 303; checksumv 0 3 2585894062 null getNumChars 1230 numChars 1230 getNumTaxa 13 numTaxa 13 short true bits 15 states 15 sumSquaresStatesOnly 294593.0 sumSquares 294593.0 longCompressibleToShort false usingShortMatrix true NumFiles 1 NumMatrices 1; mqVersion; endTell; getWindow; tell It; suppress; setResourcesState true false 118; setPopoutState 400; setExplanationSize 0; setAnnotationSize 0; setFontIncAnnot 0; setFontIncExp 0; setSize 1103 701; setLocation 8 23; setFont SanSerif; setFontSize 10; getToolPalette; tell It; endTell; setActive; desuppress; endTell; getEmployee #mesquite.charMatrices.BasicDataWindowCoord.BasicDataWindowCoord; tell It; showDataWindow #5599315089606765889 #mesquite.charMatrices.BasicDataWindowMaker.BasicDataWindowMaker; tell It; getWindow; tell It; setExplanationSize 30; setAnnotationSize 20; setFontIncAnnot 0; setFontIncExp 0; setSize 0 -72; setLocation 8 23; setFont SanSerif; setFontSize 10; getToolPalette; tell It; endTell; setTool mesquite.charMatrices.BasicDataWindowMaker.BasicDataWindow.arrow; colorCells #mesquite.charMatrices.ColorByState.ColorByState; tell It; setStateLimit 9; toggleUniformMaximum on; endTell; colorRowNames #mesquite.charMatrices.TaxonGroupColor.TaxonGroupColor; colorColumnNames #mesquite.charMatrices.CharGroupColor.CharGroupColor; colorText #mesquite.charMatrices.NoColor.NoColor; setBackground White; toggleShowNames on; toggleShowTaxonNames on; toggleTight off; toggleThinRows off; toggleShowChanges off; toggleSeparateLines off; toggleShowStates on; toggleAutoWCharNames off; toggleAutoTaxonNames off; toggleShowDefaultCharNames off; toggleConstrainCW on; toggleBirdsEye off; toggleShowPaleGrid off; toggleShowPaleCellColors off; toggleShowPaleExcluded off; togglePaleInapplicable on; toggleShowBoldCellText off; toggleAllowAutosize off; toggleColorsPanel off; toggleLinkedScrolling on; toggleScrollLinkedTables off; endTell; getWindow; tell It; forceAutosize; endTell; hideWindow; getEmployee #mesquite.charMatrices.ColorCells.ColorCells; tell It; setColor Red; removeColor off; endTell; getEmployee #mesquite.categ.StateNamesStrip.StateNamesStrip; tell It; showStrip off; endTell; getEmployee #mesquite.charMatrices.AnnotPanel.AnnotPanel; tell It; togglePanel off; endTell; getEmployee #mesquite.charMatrices.CharReferenceStrip.CharReferenceStrip; tell It; showStrip off; endTell; getEmployee #mesquite.charMatrices.QuickKeySelector.QuickKeySelector; tell It; autotabOff; endTell; getEmployee #mesquite.charMatrices.SelSummaryStrip.SelSummaryStrip; tell It; showStrip off; endTell; getEmployee #mesquite.align.AlignToDropped.AlignToDropped; tell It; gapCosts 8 3 2 2; subCosts 10 5 10 10 10 5 5 10 10 10 5 10; endTell; getEmployee #mesquite.molec.ColorByAA.ColorByAA; tell It; emphasizeDegeneracy off; endTell; getEmployee #mesquite.molec.SequenceInfoEditor.SequenceInfoEditor; tell It; panelOpen false; endTell; endTell; endTell; endTell; end;