#NEXUS [written Tue Feb 25 12:47:53 CET 2014 by Mesquite version 2.75 (build 564) at obornik-HPPC/10.0.0.228] BEGIN TAXA; TITLE Taxa; DIMENSIONS NTAX=26; TAXLABELS Psilocybe_medullosa_P11 Psilocybe_medullosa_P17 Psilocybe_pelliculosa_P19 Psilocybe_medullosa_P20 Psilocybe_silvatica_P24 Psilocybe_atrobrunnea_P25 Leratiomyces_laetissimus_P27 Psilocybe_cubensis_P30 Psilocybe_semilanceata_P31 Psilocybe_atrobrunnea_P32 Psilocybe_weraroa_P34 Psilocybe_atrobrunnea_P36 Psilocybe_medullosa_P37 Leratiomyces_squamosus_P38 Psilocybe_fasciata_AB158635 Psilocybe_semilanceata_HM035080 Psilocybe_cubensis_HM035082 Psilocybe_allenii_HE994442 Psilocybe_cyanescens_GU565175 Psilocybe_ovoideocystidiata_HE994454 Psilocybe_serbica_GU565177 Psilocybe_caerulescens_HM035072 Psilocybe_mexicana_HM035077 Leratiomyces_ceres_HQ604750 Hypholoma_marginatum_HE994445 Psilocybe_atrobrunnea_P54 ; END; BEGIN CHARACTERS; TITLE Character_Matrix; DIMENSIONS NCHAR=586; FORMAT DATATYPE = DNA INTERLEAVE GAP = - MISSING = -; MATRIX Psilocybe_medullosa_P11 GATCATTATTGAATGAACTTGGCTCGGTTGCAGCTGGTCCTTTCGAGGGCATGTGCTCGCCTGTCATCTTTATCTCTCCACCTGTGCACGTTTTGTAGAC Psilocybe_medullosa_P17 GATCATTATTGAATGAACTTGGCTCGGTTGCAGCTGGTCCTTTCGAGGGCATGTGCTCGCCTGTCATCTTTATCTCTCCACCTGTGCACGTTTTGTAGAC Psilocybe_pelliculosa_P19 GATCATTATTGAATGAACTTGGCTCGGTTGCAGCTGGTCCTCTCGAGGGCATGTGCTCGCCTGTCATCTTTATCTCTCCACCTGTGCACCTTTTGTAGAC Psilocybe_medullosa_P20 GATCATTATTGAATGAACTTGGCTCGGTTGCAGCTGGTCCTTTCGAGGGCATGTGCTCGCCTGTCATCTTTATCTCTCCACCTGTGCACGTTTTGTAGAC Psilocybe_silvatica_P24 GATCATTATTGAATGAACTTGGCTCGGTTGCAGCTGGTCCTTTCGAGGGCATGTGCTCGCCTGTCATCTTTATCTCTCCACCTGTGCACGTTTTGTAGAC Psilocybe_atrobrunnea_P25 GATCATTATTGAATGAACTTGGCTTGGTTGCAGCTGGCCCTCTCGGGGGCATGTGCTCGCCCGTCATCTTTATCTCTCCACCTGTGCACCCTTTGTAGAC Leratiomyces_laetissimus_P27 GATCATTATTGAATGAACTTGGCTTAGTTGCTGCTGGTCTTTTCGAAGGCATGTGCACACTTGTCATCTTTATCTCTCCACCTGTGCACCTTTTGTAGAS Psilocybe_cubensis_P30 GATCATTATTGAATAACTTTGGCGTGGTTGTAGCTGGCCCTCTCGGGGGCATGTGCTCGCCCGTCATCTTTATATTTCCACCTGTGCACTTTTTGTAGAT Psilocybe_semilanceata_P31 GATCATTATTGAATGAACTTGGCTCGGTTGTAGCTGGTCCTCTCGGGGGCATGTGCTCGCCTGTCATCTTTATCTCTCCACCTGTGCACCTTTTGTAGAC Psilocybe_atrobrunnea_P32 GATCATTATTGAATGAACTTGGCTTGGTTGCAGCTGGCCCTCTCGGGGGCATGTGCTCGCCCGTCATCTTTATCTCTCCACCTGTGCACCCTTTGTAGAC Psilocybe_weraroa_P34 GATCATTATTGAATAACTTTGGCGTGGTTGTAGCTGGTCCTCTCGGGGGCATGTGCTCGCTCGTCATCTTTATATCTCCACCTGTGCACCTTTTGTAGAG Psilocybe_atrobrunnea_P36 GATCATTATTGAATRAACTTGGCYTGGTTGCAGCTGGCCCTCTCGGGGGCATGTGCTCGCCCGTCATCTTTATCTCTCCACCTGTGCACCCTTTGTAGAC Psilocybe_medullosa_P37 GATCATTATTGAATGAACTTGGCTCGGTTGCAGCTGGTCCTTTCGAGGGCATGTGCTCGCCTGTCATCTTTATCTCTCCACCTGTGCACRTTTTGTAGAC Leratiomyces_squamosus_P38 GATCATTATTGAATGAACTTGATTTAGTTGTTGCTGGTCTTTTCGAAGGCATGTGCACACTTATCATCTTTATATCTCCACCTGTGCACCTTTTGTAGAC Psilocybe_fasciata_AB158635 GATCATTATTGAATGAACTTGGCTCGGTTGCAGCTGGTCCTCTCGAGGGCATGTGCTCGCCTGTCATCTTTATCTCTCCACCTGTGCACCTTTTGTAGAC Psilocybe_semilanceata_HM035080 -ATCATTATTGAATGAACTTGGCTCGGTTGTAGCTGGTCCTCTCGGGGGCATGTGCTCGCCTGTCATCTTTATCTCTCCACCTGTGCACCTTTTGTAGAC Psilocybe_cubensis_HM035082 ------------ATAACTTTGGCGTGGTTGTAGCTGGCCCTCTCGGGGGCATGTGCTCGCCCGTCATCTTTATATTTCCACCTGTGCACTTTTTGTAGAT Psilocybe_allenii_HE994442 GATCATTATTGAATAACTTTGGCGTGGTTGTAGCTGGTCCTCTCGGGGGCATGTGCTCGCCCGTCATCTTTATATCTCCACCTGTGCACCTTTTGTAGAG Psilocybe_cyanescens_GU565175 GATCATTATTGAATAACTTTGGCGTGGTTGTAGCTGGTCCTCTCGGGGGCATGTGCTCGCCCGTCATCTTTATATCTCCACCTGTGCACCTTTTGTAGAG Psilocybe_ovoideocystidiata_HE994454 GATCATTATTGAATAACTTTGGCGTGGTTGTAGCTGGCCCTCTCGGGGGCATGTGCTCGCCYGTCATCTTTATATCTCCACCTGTGCACCTTTTGTAGAT Psilocybe_serbica_GU565177 GATCATTATTGAATAACTTTGGCGTGGTTGTAGCTGGCCCTCTCGGGGGCATGTGCCCACCTGTCATCTTTATATCTCCACCTGTGCACCCTTTGTAGAT Psilocybe_caerulescens_HM035072 ---------------------------TTGTAGCTGGTCCTCTCGGGGACATGTGCTCGCCTGTCATCTTTATCTATCCACCTGTGAACCTTTTGTAGAC Psilocybe_mexicana_HM035077 GATCATTATTG-ATGAACTTGACTTGGTTGTAGCTGGTCCTCTAGGGGACATGTGCTCGCCTGTCATCTTTATCTATCCACCTGTGAACCTTTTGTAGAC Leratiomyces_ceres_HQ604750 GATCATTATTGAATGAACTTGGCTTAGTTGTTGCTGGTCTTTTCGAAGGCATGTGCACGCTTGTCATCTTTATCTCTCCACCTGTGCACCTTTTGTAGAC Hypholoma_marginatum_HE994445 GATCATTATTGAATGAACTTGACATGGTTGCTGCTGGTCTTTTCGGAGGCATGTGCACACCTGTCATCTTTATATCTCCACCTGTGCACCTTTTGTAGAC Psilocybe_atrobrunnea_P54 GATCATTATTGAATGAACTTGGCTTGGTTGCAGCTGGCCCTCTCGGGGGCATGTGCTCGCCCGTCATCTTTATCTCTCCACCTGTGCACCCTTTGTAGAC Psilocybe_medullosa_P11 CCTTCCTTGCAAGGCCTATGTTTTCATATACCCCAAAGAATGTAACAGAATGTATATATGGCCTTGTGCCTATAAACTATATACAACTTTCAGCAACGGA Psilocybe_medullosa_P17 CCTTCCTTGCAAGGCCTATGTTTTCATATACCCCAAAGAATGTAACAGAATGTATATATGGCCTTGTGCCTATAAACTATATACAACTTTCAGCAACGGA Psilocybe_pelliculosa_P19 CCCTCCTTGCAAGGCCTAYGTTTTCATATACCCCAAAGTATGTAACAGAATGTATATATGGCCTTGTGCCTATAAACTATATACAACTTTCAGCAACGGA Psilocybe_medullosa_P20 CCTTCCTTGCAAGGCCTATGTTTTCATATACCCCAAAGAATGTAACAGAATGTATATATGGCCTTGTGCCTATAAACTATATACAACTTTCAGCAACGGA Psilocybe_silvatica_P24 CCTTCCTTGCAAGGCCTATGTTTTCATATACCCCAAAGAATGTAACAGAATGTATATATGGCCTTGTGCCTATAAACTATATACAACTTTCAGCAACGGA Psilocybe_atrobrunnea_P25 CCTTCCTTGCCAGGCCTATGTTTTCATATACCCCAAAGTATGTAACAGAATGTATATATGGCCCTGTGCCTATAAACTATATACAACTTTCAGCAACGGA Leratiomyces_laetissimus_P27 CTCCTTGTATGAGGCCTATGTTTTCATATACACCAAAGAATGTAACAGAATGTAAATTGGGCTTTATTCCTATAAACTATATACAACTTTCAGCAACGGA Psilocybe_cubensis_P30 TCTCTCTGATGAGGTCTACGTTTTCATATACTCCAATGAATGTAACAGAATGTATTTATGGCCTTGTGCCTATAAACAATATACAACTTTCAGCAACGGA Psilocybe_semilanceata_P31 CCCTCCTTGCAAGGCCTACGTTTTCATATACCCCAAAGAATGTAACAGAATGTATATATGGCCTTGTGCCTATAAACTATATACAACTTTCAGCAACGGA Psilocybe_atrobrunnea_P32 CCTTCCTTGCCAGGCCTATGTTTTCATATACCCCAAAGTATGTAACAGAATGTATATATGGCCCTGTGCCTATAAACTATATACAACTTTCAGCAACGGA Psilocybe_weraroa_P34 TTTGTCCTTCAAGCTCTACGTTTTCATATACCCCAAAGAATGTAACAGAATGTATTTATGGCTTTATGCCTATAAACTATATACAACTTTCAGCAACGGA Psilocybe_atrobrunnea_P36 CCTTCCTTGCCAGGCCTATGTTTTCATATACCCCAAAGTATGTAACRGAATGTATATATGGCCCTGTGCCTATAAACTATATACAACTTTCAGCAACGGA Psilocybe_medullosa_P37 CCTTCCTTGCAAGGCCTATGTTTTCATATACCCCAAAGAATGTAACAGAATGTATATATGGCCTTGTGCCTATAAACTATATACAACTTTCAGCAACGGA Leratiomyces_squamosus_P38 TTATTATTCTGAAGCCTATGTTTTCATATACACCAAAGAATGTAACAGAATGTAAATTGGGCTTTATTCCTATAAACTATATACAACTTTCAGCAACGGA Psilocybe_fasciata_AB158635 CCCTCCTTGCAAGGCCTACGTTTTCATATACCCCAAAGAATGTAACAGAATGTATTATTGGCCTTGTGCCTATAAACTATATACAACTTTCAGCAACGGA Psilocybe_semilanceata_HM035080 CCCTCCTTGCAAGGCCTACGTTTTCATATACCCCAAAGAATGTAACAGAATGTATTATTGGCCTTGTGCCTATAAACTATATACAACTTTCAGCAACGGA Psilocybe_cubensis_HM035082 CCTTTCTCAATGGGTCTACGTTTTCATATACTCCAATGAATGTAACAGAATGTATATATGGCCTTGTGCCTATAAACAATATACAACTTTCAGCAACGGA Psilocybe_allenii_HE994442 TTTGTCCTTCAAGCTCTACGTTTTCATATACCCCAAAGAATGTAACAGAATGTWTTTATGGCTTTATGCCTATAAACTATATACAACTTTCAGCAACGGA Psilocybe_cyanescens_GU565175 TTTGTCCTTCAAGCTCTACGTTTTCATATACCCCAAAGAATGTAACAGAATGTATTTATGGCTTTATGCCTATAAACTATATACAACTTTCAGCAACGGA Psilocybe_ovoideocystidiata_HE994454 TCTCTTTCTCGAGCTCTATGTTTTCATATACCCCAA-GTATGTAACAGAATGTATTTATGGCCTTGTGCCTATAAACTATATACAACTTTCAGCAACGGA Psilocybe_serbica_GU565177 TAGAGTTTCCAAGGTCTACGTTTTCATATACCCCAAAGAATGTAATAGAATGTATATATGGCCCAGTGCCTATAAACTAAATACAACTTTCAGCAACGGA Psilocybe_caerulescens_HM035072 TCCTTCTTGAAAGGCCTATGTTTTCATATACCCCAAAGAATGTAACAGAATGTATGTATGGCCTTGTGCCTATAAA-TCTATACAACTTTCAGCAACGGA Psilocybe_mexicana_HM035077 TCCTCTTTGAAAGGCCTATGTTTTCATATACCCCAAAGAATGTAACAGAATGTATGTATGGCCTTGTGCCTATAAATCATATACAACTTTCAGCAACGGA Leratiomyces_ceres_HQ604750 CCTTCCTTGTAAGGCCTATGTTTTCATATACACCAAAGAATGTAATAGAATGTA-ATTGGGCTTTAA-CCTATAAATCATATACAACTTTCAGCAACGGA Hypholoma_marginatum_HE994445 CCTTCCTTGAAAGGCCTATGTTTTCATATACACCAAAGAATGTAACAGAATGTCAATTAGGCTTTATTCTTATAAACTATATACAACTTTCAGCAACGGA Psilocybe_atrobrunnea_P54 CCTTCCTTGCCAGGCCTATGTTTTCATATACCCCAAAGTATGTAACAGAATGTATATATGGCCCTGTGCCTATAAACTATATACAACTTTCAGCAACGGA Psilocybe_medullosa_P11 TCTCTTGGCTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGC Psilocybe_medullosa_P17 TCTCTTGGCTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGC Psilocybe_pelliculosa_P19 TCTCTTGGCTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGC Psilocybe_medullosa_P20 TCTCTTGGCTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGC Psilocybe_silvatica_P24 TCTCTTGGCTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGC Psilocybe_atrobrunnea_P25 TCTCTTGGCTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGC Leratiomyces_laetissimus_P27 TCTCTTGGCTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGC Psilocybe_cubensis_P30 TCTCTTGGCTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGC Psilocybe_semilanceata_P31 TCTCTTGGCTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGC Psilocybe_atrobrunnea_P32 TCTCTTGGCTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGC Psilocybe_weraroa_P34 TCTCTTGGCTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGC Psilocybe_atrobrunnea_P36 TCTCTTGGCTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGC Psilocybe_medullosa_P37 TCTCTTGGCTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGC Leratiomyces_squamosus_P38 TCTCTTGGCTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGC Psilocybe_fasciata_AB158635 TCTCTTGGCTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGC Psilocybe_semilanceata_HM035080 TCTCTTGGCTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGC Psilocybe_cubensis_HM035082 TCTCTTGGCTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGC Psilocybe_allenii_HE994442 TCTCTTGGCTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGC Psilocybe_cyanescens_GU565175 TCTCTTGGCTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGC Psilocybe_ovoideocystidiata_HE994454 TCTCTTGGCTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGC Psilocybe_serbica_GU565177 TCTCTTGGCTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGC Psilocybe_caerulescens_HM035072 TCTCTTGGCTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGC Psilocybe_mexicana_HM035077 TCTCTTGGCTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGC Leratiomyces_ceres_HQ604750 TCTCTTGGCTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGC Hypholoma_marginatum_HE994445 TCTCTTGGCTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGC Psilocybe_atrobrunnea_P54 TCTCTTGGCTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGC Psilocybe_medullosa_P11 TCCTTGGTATTCCGAGGAGCATGCCTGTTTGAGTGTCATTAAATTCTCAACCTTACCAGCTTTTGCTGGTAATGGCTTGGATGTGGGGGTTTGCTGGCTT Psilocybe_medullosa_P17 TCCTTGGTATTCCGAGGAGCATGCCTGTTTGAGTGTCATTAAATTCTCAACCTTACCAGCTTTTGCTRGTAATGGCTTGGATGTGGGGGTTTGCTGGCTT Psilocybe_pelliculosa_P19 TCCTTGGTATTCCGAGGAGCATGCCTGTTTGAGTGTCATTAAATTCTCAACCTTACCAGCTTTTGCTGATAATGGCTTGGATGTGGGGGTTTGCTGGCTT Psilocybe_medullosa_P20 TCCTTGGTATTCCGAGGAGCATGCCTGTTTGAGTGTCATTAAATTCTCAACCTTACCAGCTTTTGCTAGTAATGGCTTGGATGTGGGGGTTTGCTGGCTT Psilocybe_silvatica_P24 TCCTTGGTATTCCGAGGAGCATGCCTGTTTGAGTGTCATTAAATTCTCAACCTTACCAGTGTTTGCTGGTAATGGCTTGGATGTGGGGGTTTGCTGGCTT Psilocybe_atrobrunnea_P25 TCCTTGGTATTCCGAGGAGCATGCCTGTTTGAGTGTCATTAAATTCTCAACCTTACCAGCTTTTGCTAGTAACGGCTTGGACTTGGGGGTTTGCTGGCTT Leratiomyces_laetissimus_P27 TCCTTGGTATTCCGAGGAGCATGCCTGTTTGAGTGTCATTAAATTCTCAACCTTTATCTTTT-TATTGAAAATGGCTTGGACTTGGGGGTTTGCTGGCGA Psilocybe_cubensis_P30 TCCTTGGTATTCCGAGGAGCATGCCTGTTTGAGTGTCATTAAATTCTCAACCTTACCAGCTTTTGTTAGTAATGGCTTGGACTTGGGGGTTTGCCGGCTT Psilocybe_semilanceata_P31 TCCTTGGTATTCCGAGGAGCATGCCTGTTTGAGTGTCATTAAATTCTCAACCTTACCAGCTTTTGCTGATAATGGCTTGGATGTGGGGGTTTGCTGGCTT Psilocybe_atrobrunnea_P32 TCCTTGGTATTCCGAGGAGCATGCCTGTTTGAGTGTCATTAAATTCTCAACCTTACCAGCTTTTGCTAGTAACGGCTTGGACTTGGGGGTTTGCTGGCTT Psilocybe_weraroa_P34 TCCTTGGTATTCCGAGGAGCATGCCTGTTTGAGTGTCATTAAATTCTCAACCTTACCAGCTTTTGTTAGTAATGGCTTGGACTTGGGGGTTTGCCGGCTT Psilocybe_atrobrunnea_P36 TCCTTGGTATTCCGAGGAGCATGCCTGTTTGAGTGTCATTAAATTCTCAACCTTACCAGCTTTTGCTAGTAAYGGCTTGGACTTGGGGGTTTGCTGGCTT Psilocybe_medullosa_P37 TCCTTGGTATTCCGAGGAGCATGCCTGTTTGAGTGTCATTAAATTCTCAACCTTACCAGCTTTTGCTAGTAATGGCTTGGATGTGGGGGTTTGCTGGCTT Leratiomyces_squamosus_P38 TCCTTGGTATTCCGAGGAGCATGCCTGTTTGAGTGTCATTAAATTCTCAACCTTTTTATTCTA---TAAAAATGGCTTGGACTTGGGGGTTTGCCGGCGA Psilocybe_fasciata_AB158635 TCCTTGGTATTCCGAGGAGCATGCCTGTTTGAGTGTCATTAAATTCTCAACCTTACCAGCTTTTGCTGATAATGGCTTGGATGTGGGGGTTTGCTGGCTT Psilocybe_semilanceata_HM035080 TCCTTGGTATTCCGAGGAGCATGCCTGTTTGAGTGTCATTAAATTCTCAACCTTACCAGCTTTTGCTGATAATGGCTTGGATGTGGGGGTTTGCTGGCTT Psilocybe_cubensis_HM035082 TCCTTGGTATTCCGAGGAGCATGCCTGTTTGAGTGTCATTAAATTCTCAACCTTACCAGCTTTTGTTAGTAATGGCTTGGACTTGGGGGTTTGCCGGCTT Psilocybe_allenii_HE994442 TCCTTGGTATTCCGAGGAGCATGCCTGTTTGAGTGTCATTAAATTCTCAACCTTACCAGCTTTTGTTAGTAATGGCTTGGACTTGGGGGTTTGCCGGCTT Psilocybe_cyanescens_GU565175 TCCTTGGTATTCCGAGGAGCATGCCTGTTTGAGTGTCATTAAATTCTCAACCTTACCAGCTTTTGTTAGTAATGGCTTGGACTTGGGGGTTTGCCGGCTT Psilocybe_ovoideocystidiata_HE994454 TCCTTGGTATTCCGAGGAGCATGCCTGTTTGAGTGTCATTAAATTCTCAACCTTACCAGCTTTTGTTAGTAATGGCTTGGACTTGGGGGTTTGCCGGCTT Psilocybe_serbica_GU565177 TCCTTGGTATTCCGAGGAGCATGCCTGTTTGAGTGTCATTAAATTCTCAACCTTACCAGCTTTTGTTAGTAATGGCTTGGACTTGGGGGTTTGCTGGCTT Psilocybe_caerulescens_HM035072 TCCTTGGTATTCCGAGGAGCATGCCTGTTTGAGTGTCATTAAATTCTCAACCTTACCAGCTTTTGCTGATAAYGGCTTGGATGTGGGGGTTTGCTGGCTT Psilocybe_mexicana_HM035077 TCCTTGGTATTCCGAGGAGCATGCCTGTTTGAGTGTCATTAAATTCTCAACCTTACCAGCTTTTGCTGATAATGGCTTGGATGTGGGGGTTTGCTGGCTT Leratiomyces_ceres_HQ604750 TCCTTGGTATTCCGAGGAGCATGCCTGTTTGAGTGTCATTAAATTCTCAACCTTTTTATCTTTTGATGAAAATGGCTTGGACTTGGGGGTTTGCTGGCGC Hypholoma_marginatum_HE994445 TCCTTGGTATTCCGAGGAGCATGCCTGTTTGAGTGTCATTAAATTCTCAACCTTTATCAACTTTTTTGGAAATGGCTTGGATGTGGGGGTATGCAGGTTT Psilocybe_atrobrunnea_P54 TCCTTGGTATTCCGAGGAGCATGCCTGTTTGAGTGTCATTAAATTCTCAACCTTACCAGCTTTTGCTAGTAACGGCTTGGACTTGGGGGTTTGCTGGCTT Psilocybe_medullosa_P11 CGGTCGGCTCCCCTTAAATGCATTAGCTGGTGCCCCGCGCGGAACCGTCTATTGGTGTGATAATTATCTACGCCGTGGACGTCTGCATCAATGGGATGCG Psilocybe_medullosa_P17 CGGTCGGCTCCCCTTAAATGCATTAGCTGGTGCCCCGCGCGGAACCGTCTATTGGTGTGATAATTATCTACGCCGTGGACGTCTGCATSAATGGGATGCG Psilocybe_pelliculosa_P19 CGGTCTGCTCCCCTTAAATGTATTAGCCGGTGCCCCGCGCAGAGCCGTCTATTGGTGTGATAATTATCTACGCCGTGGACGTCTGCATGAATGGGATGCG Psilocybe_medullosa_P20 CGGTCGGCTCCCCTTAAATGCATTAGCTGGTGCCCCGCGCGGAACCGTCTATTGGTGTGATAATTATCTACGCCGTGGACGTCTGCATGAATGGGATGCG Psilocybe_silvatica_P24 CGGTCGGCTCCCCTTAAATGCATTAGCTGGTGCCCCGCGCGGAACCGTCTATTGGTGTGATAATTATCTACGCCGTGGACGTCTGCATCAATGGGATGCG Psilocybe_atrobrunnea_P25 CGGTCTGCTCCCCTTAAATGCATTAGCCGGCGCCCCGCGTGGAACCGTCTATTGGTGTGATAATTATCTACGCCGTGGACGTCTGCTTTAATGGGTTGCG Leratiomyces_laetissimus_P27 AAGTCARCTCCTCTGAAATGTATTAGCTGGTGCCTTGTGTGAACTTGTCTATTGGTGTGATAATTATCTACGCCGTGGGCTGTTG----CCGTTTTAGCA Psilocybe_cubensis_P30 CAGTCAGCTCCCCTTAAATGCATTAGCCGGCTGCCCGCTGTGGACCGTCTATTGGTGTGATAATTATCTACGCCGTGGATGTTACTATTAATGGGTGAAG Psilocybe_semilanceata_P31 CGGTCTGCTCCCCTTAAATGTATTAGCCGGTGCCCCGCGCAGAGCCGTCTATTGGTGTGATAATTATCTACGCCGTGGACCTTTGCATGAATGGGATGCG Psilocybe_atrobrunnea_P32 CGGTCTGCTCCCCTTAAATGCATTAGCCGGCGCCCCGCGTGGAACCGTCTATTGGTGTGATAATTATCTACGCCGTGGACGTCTGCTTTAATGGGTTGCG Psilocybe_weraroa_P34 CTGTCAGCTCCCCTTAAATGCATTAGCCGGCTGCCCGCTGTGGACCGTCTATTGGTGTGATAATTATCTACGCCGTGGACGTTGCTCTCAATGGGTGAAG Psilocybe_atrobrunnea_P36 CGGTCTGCTCCCCTTAAATGCATTAGCCGGCGCCCCGCGTGGAACCGTCTATTGGTGTGATAATTATCTACGCCGTGGACGTCTGCTTTAATGGGTTGCG Psilocybe_medullosa_P37 CGGTCGGCTCCCCTTAAATGCATTAGCTGGTGCCCCGCGCGGAACCGTCTATTGGTGTGATAATTATCTACGCCGTGGACGTCTGCATGAATGGGATGCG Leratiomyces_squamosus_P38 AAGTCAGCTCCTCTGAAAAGTATTAGCTGGTGCCTTGTGTGAACTTGTCTATTGGTGTGATAATTATCTACGCCGTGGGCTGTTG--CCGCTTTATAGCA Psilocybe_fasciata_AB158635 CGGTCTGCTCCCCTTAAATGTATTAGCCGGTGCCCCGCGCAGAGCCGTCTATTGGTGTGATAATTATCTACGCCGTGGACCTTTGCATGAATGGGATGCG Psilocybe_semilanceata_HM035080 CGGTCTGCTCCCCTTAAATGTATTAGCCGGTGCCCCGCGCAGAGCCGTCTATTGGTGTGATAATTATCTACGCCGTGGACCTTTGCATGAATGGGATGCG Psilocybe_cubensis_HM035082 CAGTCAGCTCCCCTTAAATGCATTAGCCGGCTGCCCGCTGTGGACCGTCTATTGGTGTGATAATTATCTACGCCGTGGATGTCTACATTAATGGGTGAAG Psilocybe_allenii_HE994442 CTGTCAGCTCCCCTTAAATGCATTAGCCGGCTGCCCGCTGTGGACCGTCTATTGGTGTGATAATTATCTACGCCGTGGACGTTGCTCTCAATGGGTGAAG Psilocybe_cyanescens_GU565175 CTGTCAGCTCCCCTTAAATGTATTAGCCGGCTGCCCGCTGTGGACCGTCTATTGGTGTGATAATTATCTACGCCGTGGACGTTGCTCTCAATGGGTGAAG Psilocybe_ovoideocystidiata_HE994454 CAGTCAGCTCCCCTTAAATGCATTAGCCGGCTGCCCGCTGTGGACCGTCTATTGGTGTGATAATTATCTACGCCGTGGATGTTGCTATCAATGGGTAAAG Psilocybe_serbica_GU565177 CGGTCAGCTCCCCTTAAATGCATTAGCCGGCTTCCCTGCGTGGACCGTCTATTGGTGTGATAATTATCTACGCCGTGGACAACTGCTTTAATGGGTGAAG Psilocybe_caerulescens_HM035072 AGGTCGGCTCCCCTCAAATGTATTAGCCGGTACCCTGCGCGGAACCGTCTATTGGTGTGATAATTATCTACGCCGTGGACATCTGCATGAATGGGATGTA Psilocybe_mexicana_HM035077 CGGTCGGCTCCCCTCAAATGCATTAGCTGGTACCCCGCGCGGAGCCGTCTATTAGTGTGATAATTATCTACGCTGTGGACATCTGCATCAATGGGATGTA Leratiomyces_ceres_HQ604750 AAGTCAGCTCCTCTGAAATGTATTAGCTAGT-----GTGAAACCTAGTCTATTGGTGTGATAATTATCTACGCCGTGGACTTTTTAACAA-------GCA Hypholoma_marginatum_HE994445 CAATCAGCTCCCCTGAAATATATTAGCTGGTGCCTTGTGTATACCTGTCTATTGGTGTGATAATTATCTACGCCATTGACTGGTT--GCCGTTTTTAGCA Psilocybe_atrobrunnea_P54 CGGTCTGCTCCCCTTAAATGCATTAGCCGGCGCCCCGCGTGGAACCGTCTATTGGTGTGATAATTATCTACGCCGTGGACGTCTGCTTTAATGGGTTGCG Psilocybe_medullosa_P11 CTGCTTCTAACCGTCCTTCTGGACAACACATGACAATTTGACCTCAAATCAGGTAGGACTACCCGCTGAACTTAAGCATATCAATA Psilocybe_medullosa_P17 CTGCTTCTAACCGTCCKTCTGGACAACACATGACAATTTGACCTCAAATCAGGTAGGACTACCCGCTGAACTTAAGCATATCAATA Psilocybe_pelliculosa_P19 CTGCTTCTAACCGTCCTTCTGGACAACACATGACAATTTGACCTCAAATCAGGTAGGACTACCCGCTGAACTTAAGCATATCAATA Psilocybe_medullosa_P20 CTGCTTCTAACCGTCCGTCTGGACAACACATGACAATTTGACCTCAAATCAGGTAGGACTACCCGCTGAACTTAAGCATATCAATA Psilocybe_silvatica_P24 CTGCTTCTAACCGTCCGCCTGGACAACACATGACAATTTGACCTCAAATCAGGTAGGACTACCCGCTGAACTTAAGCATATCAATA Psilocybe_atrobrunnea_P25 CTGCTTCTAACCGTCTGTTCGGACAAACCATGACAATTTGACCTCAAA-------------------------------------- Leratiomyces_laetissimus_P27 CTGCTTCTAACTGTCTGTTCGGACAATATATGACAATTTGACCTCAAATCAGGTAGGACTACCCGCTGAACTTAAGCATATCAATA Psilocybe_cubensis_P30 CTGCTTCAAACCGTCTGTTCAGACAAT-TATGACAATTTGACCTCAAATCAGGTAGGACTACCCGCTGAACTTAAGCATATCAATA Psilocybe_semilanceata_P31 CTGCTTCTAACCGTCCTTCTGGACAATACATGACAATTTGACCTCAAATCAGGTAGGACTACCCGCTGAACTTAAGCATATCAATA Psilocybe_atrobrunnea_P32 CTGCTTCTAACCGTCTGTTCGGACAAACCATGACAATTTGACCTCAAATCAGGTAGGACTACCCGCTGAACTTAAGCATATCAATA Psilocybe_weraroa_P34 CTGCTTCTAACCGTCCGTTCGGACAGCACATGACAATTTGACCTCAAATCAGGTAGGACTACCCGCTGAACTTAAGCATATCAATA Psilocybe_atrobrunnea_P36 CTGCTTCTAACCGTCTGTTCGGACAAACCATGACAATTTGACCTCAAATCAGGTAGGACTACCCGCTGAACTTAAGCATATCAATA Psilocybe_medullosa_P37 CTGCTTCTAACCGTCCGTCTGGACAACACATGACAATTTGACCTCAAATCAGGTAGGACTACCCGCTGAACTTAAGCATATCAATA Leratiomyces_squamosus_P38 CCGCTTCTAACCGTCTGTTCGGACAATTTATGACAATTTGACCTCAAATCAGGTAGGACTACCCGCTGAACTTAAGCATATCAATA Psilocybe_fasciata_AB158635 CTGCTTCTAACCGTCCTT-TGGACAATACATGACAATTTGACCTCAAATCAGGTAGGACTACCCGCTGAACTTAAGCATATCAATA Psilocybe_semilanceata_HM035080 CTGCTTCTAACCGTCCTT-TGGACAATACATGACAATTTGACCTCAAATCAGGTAGGACTACCCGCTGAACTTAAGCATATCAATA Psilocybe_cubensis_HM035082 CTGCTTCAAACCGTCTGTTCAGACAATTAATGACAATTTGACCTCAAATCAGGTAGGACTACCCGCTGAACTTAAGCATATCAATA Psilocybe_allenii_HE994442 CTGCTTCTAACCGTCCGTTCGGACAGCACATGACAATTTGACCTCAAATCAGGTAGGACTACCCGCTGAACTTAAGCATATCAATA Psilocybe_cyanescens_GU565175 CTGCTTCTAACCGTCCGTTCGGACAGCACATGACAATTTGACCTCAAATCAGGTAGGACTACCCGCTGAACTTAAGCATATCAATA Psilocybe_ovoideocystidiata_HE994454 CTGCTTCTAACCGTCTGTTCGGACAATACATGACAATTTGACCTCAAATCAGGTAGGACTACCCGCTGAACTTAAGCATATCA--- Psilocybe_serbica_GU565177 CTGCTTCTAACCGTCCGTTTGGACAATACATGACAATTTGACCTCAAATCAGGTAGGACTACCCGCTGAACTTAAGCATATCAATA Psilocybe_caerulescens_HM035072 CTGCTTCTAACCGTCCATCTGGACAACACATGACAATTTGACCTCAAATCAGGTAGGACTACCCGCTGAACTTAAGCATATCAATA Psilocybe_mexicana_HM035077 CTGCTTCTAACCGTCCATCTGGACAATACATGACAATTTGACCTCAAATCAGGTAGGACTACCCGCTGAACTTAAGCATATCAATA Leratiomyces_ceres_HQ604750 CTGCTTCTAACCGTCTGTTCGGACAATTTATGACAATTTGACCTCAAATCAGGTAGGACTACCCGCTGAACTTAAGCATATCAATA Hypholoma_marginatum_HE994445 CTGCTTCTAACCGTCTGTTCGGACAATATATGACAATTTGACCTCAAATCAGGTAGGACTACCCGCTGAACTTAAGCATATCAATA Psilocybe_atrobrunnea_P54 CTGCTTCTAACCGTCTGTTCGGACAAACCATGACAATTTGACCTCAAATCAGGTAGGACTACCCGCTGAACTTAAGCATATCAATA ; END; BEGIN ASSUMPTIONS; TYPESET * UNTITLED = unord: 1 - 586; END; BEGIN CODONS; CODESET * UNTITLED = universal: 1 - 586; END; BEGIN MESQUITECHARMODELS; ProbModelSet * UNTITLED = 'Jukes-Cantor': 1 - 586; END; BEGIN TREES; Title 'Trees from "ITSml2.nex"'; LINK Taxa = Taxa; TRANSLATE 1 Psilocybe_medullosa_P11, 2 Psilocybe_medullosa_P17, 3 Psilocybe_pelliculosa_P19, 4 Psilocybe_medullosa_P20, 5 Psilocybe_silvatica_P24, 6 Psilocybe_atrobrunnea_P25, 7 Leratiomyces_laetissimus_P27, 8 Psilocybe_cubensis_P30, 9 Psilocybe_semilanceata_P31, 10 Psilocybe_atrobrunnea_P32, 11 Psilocybe_weraroa_P34, 12 Psilocybe_atrobrunnea_P36, 13 Psilocybe_medullosa_P37, 14 Leratiomyces_squamosus_P38, 15 Psilocybe_fasciata_AB158635, 16 Psilocybe_semilanceata_HM035080, 17 Psilocybe_cubensis_HM035082, 18 Psilocybe_allenii_HE994442, 19 Psilocybe_cyanescens_GU565175, 20 Psilocybe_ovoideocystidiata_HE994454, 21 Psilocybe_serbica_GU565177, 22 Psilocybe_caerulescens_HM035072, 23 Psilocybe_mexicana_HM035077, 24 Leratiomyces_ceres_HQ604750, 25 Hypholoma_marginatum_HE994445, 26 Psilocybe_atrobrunnea_P54; TREE PHYLIP_1 = (25:0.08014,(((((13:0.0,(2:0.0,4:0.0)79:0.0)231:0.002145,(5:0.006569,1:0.002168)547:0.002246)606:0.008522,((23:0.024443,22:0.011315)995:0.03662,(3:0.003722,(9:0.0,(16:0.0,15:0.004325)790:0.006557)945:0.010619)739:0.010085)612:0.007425)759:0.022464,((12:0.0,(26:0.0,(10:0.0,6:0.0)421:0.0)860:0.0)1000:0.019675,(21:0.050301,((20:0.009578,(17:0.026933,8:0.002709)922:0.031389)558:0.012457,(19:0.002159,(18:0.0,11:0.002159)868:0.0)1000:0.02593)985:0.029353)1000:0.064895)898:0.012918)1000:0.146322,(24:0.047678,(7:0.020876,14:0.047763)721:0.024529)644:0.030113):0.0); END; Begin MESQUITE; MESQUITESCRIPTVERSION 2; TITLE AUTO; tell ProjectCoordinator; timeSaved 1393328873447; getEmployee #mesquite.minimal.ManageTaxa.ManageTaxa; tell It; setID 0 1155296319249922252; tell It; attachments ; endTell; endTell; getEmployee #mesquite.charMatrices.ManageCharacters.ManageCharacters; tell It; setID 0 9096409253107299704; mqVersion 275; checksumv 0 3 3832014191 null getNumChars 586 numChars 586 getNumTaxa 26 numTaxa 26 short true bits 2305843009213693967 states 15 sumSquaresStatesOnly 369761.0 sumSquares -3.6893488147419095E19 longCompressibleToShort false usingShortMatrix true NumFiles 1 NumMatrices 1; mqVersion; endTell; getWindow; tell It; suppress; setResourcesState false false 100; setPopoutState 400; setExplanationSize 0; setAnnotationSize 0; setFontIncAnnot 0; setFontIncExp 0; setSize 700 500; setLocation 8 8; setFont SanSerif; setFontSize 10; getToolPalette; tell It; endTell; desuppress; endTell; getEmployee #mesquite.trees.BasicTreeWindowCoord.BasicTreeWindowCoord; tell It; makeTreeWindow #1155296319249922252 #mesquite.trees.BasicTreeWindowMaker.BasicTreeWindowMaker; tell It; suppressEPCResponse; setTreeSource #mesquite.trees.StoredTrees.StoredTrees; tell It; setTreeBlock 1; toggleUseWeights off; endTell; setAssignedID 876.1393328837155.4530928504363555923; getTreeWindow; tell It; setExplanationSize 30; setAnnotationSize 20; setFontIncAnnot 0; setFontIncExp 0; setSize 600 433; setLocation 8 8; setFont SanSerif; setFontSize 10; getToolPalette; tell It; endTell; setActive; getTreeDrawCoordinator #mesquite.trees.BasicTreeDrawCoordinator.BasicTreeDrawCoordinator; tell It; suppress; setTreeDrawer #mesquite.trees.SquareTree.SquareTree; tell It; setNodeLocs #mesquite.trees.NodeLocsStandard.NodeLocsStandard; tell It; branchLengthsToggle on; toggleScale on; toggleBroadScale off; toggleCenter on; toggleEven on; endTell; setEdgeWidth 6; orientUp; setCornerMode Right_Angle 50; endTell; setBackground White; setBranchColor Black; showNodeNumbers off; showBranchColors on; labelBranchLengths off; centerBrLenLabels on; showBrLensUnspecified on; showBrLenLabelsOnTerminals on; setBrLenLabelColor 0 0 255; setNumBrLenDecimals 6; desuppress; getEmployee #mesquite.trees.BasicDrawTaxonNames.BasicDrawTaxonNames; tell It; setColor Black; toggleColorPartition on; toggleShadePartition off; toggleShowFootnotes on; toggleNodeLabels on; toggleCenterNodeNames off; toggleShowNames on; namesAngle ?; endTell; endTell; setTreeNumber 1; setDrawingSizeMode 0; toggleLegendFloat on; scale 0; toggleTextOnTree off; showWindow; endTell; desuppressEPCResponse; getEmployee #mesquite.trees.ColorBranches.ColorBranches; tell It; setColor Red; removeColor off; endTell; getEmployee #mesquite.ornamental.BranchNotes.BranchNotes; tell It; setAlwaysOn off; endTell; getEmployee #mesquite.ornamental.ColorTreeByPartition.ColorTreeByPartition; tell It; colorByPartition off; endTell; getEmployee #mesquite.ornamental.DrawTreeAssocDoubles.DrawTreeAssocDoubles; tell It; setOn on; setDigits 4; writeAsPercentage off; toggleCentred on; toggleHorizontal on; toggleWhiteEdges on; setFontSize 10; setOffset 0 0; endTell; getEmployee #mesquite.ornamental.DrawTreeAssocStrings.DrawTreeAssocStrings; tell It; setOn on; toggleCentred on; toggleHorizontal on; setFontSize 10; setOffset 0 0; endTell; getEmployee #mesquite.trees.TreeInfoValues.TreeInfoValues; tell It; panelOpen false; endTell; endTell; endTell; getEmployee #mesquite.charMatrices.BasicDataWindowCoord.BasicDataWindowCoord; tell It; showDataWindow #9096409253107299704 #mesquite.charMatrices.BasicDataWindowMaker.BasicDataWindowMaker; tell It; getWindow; tell It; getTable; tell It; rowNamesWidth 239; endTell; setExplanationSize 30; setAnnotationSize 20; setFontIncAnnot 0; setFontIncExp 0; setSize 600 433; setLocation 8 8; setFont SanSerif; setFontSize 10; getToolPalette; tell It; setTool mesquite.charMatrices.WandChar.WandChar.charWand; endTell; setTool mesquite.charMatrices.WandChar.WandChar.charWand; colorCells #mesquite.charMatrices.ColorByState.ColorByState; tell It; setStateLimit 9; toggleUniformMaximum on; endTell; colorRowNames #mesquite.charMatrices.TaxonGroupColor.TaxonGroupColor; colorColumnNames #mesquite.charMatrices.CharGroupColor.CharGroupColor; colorText #mesquite.charMatrices.NoColor.NoColor; setBackground White; toggleShowNames on; toggleShowTaxonNames on; toggleTight off; toggleThinRows off; toggleShowChanges off; toggleSeparateLines off; toggleShowStates on; toggleAutoWCharNames off; toggleAutoTaxonNames off; toggleShowDefaultCharNames off; toggleConstrainCW on; toggleBirdsEye off; toggleShowPaleGrid off; toggleShowPaleCellColors off; togglePaleInapplicable on; toggleShowBoldCellText off; toggleAllowAutosize off; toggleColorsPanel off; toggleLinkedScrolling on; toggleScrollLinkedTables off; endTell; showWindow; getWindow; tell It; forceAutosize; endTell; getEmployee #mesquite.charMatrices.ColorCells.ColorCells; tell It; setColor Red; removeColor off; endTell; getEmployee #mesquite.categ.StateNamesStrip.StateNamesStrip; tell It; showStrip off; endTell; getEmployee #mesquite.charMatrices.AnnotPanel.AnnotPanel; tell It; togglePanel off; endTell; getEmployee #mesquite.charMatrices.CharReferenceStrip.CharReferenceStrip; tell It; showStrip off; endTell; getEmployee #mesquite.charMatrices.QuickKeySelector.QuickKeySelector; tell It; autotabOff; endTell; getEmployee #mesquite.charMatrices.SelSummaryStrip.SelSummaryStrip; tell It; showStrip off; endTell; getEmployee #mesquite.align.AlignToDropped.AlignToDropped; tell It; gapCosts 8 3 2 2; subCosts 10 5 10 10 10 5 5 10 10 10 5 10; endTell; getEmployee #mesquite.molec.ColorByAA.ColorByAA; tell It; emphasizeDegeneracy off; endTell; getEmployee #mesquite.molec.SequenceInfoEditor.SequenceInfoEditor; tell It; panelOpen false; endTell; endTell; endTell; endTell; end;