#NEXUS [written Thu Apr 10 10:30:08 CST 2014 by Mesquite version 2.75 (build 564) at admin-PC/124.16.9.85] BEGIN TAXA; TITLE Taxa; DIMENSIONS NTAX=76; TAXLABELS Sorghum_matarankense_2_Perry2691_3 Sorghum_matarankense_1_Perry2691_5 Sorghum_interjectum_1_Perry612 Sorghum_intrans_1_CelarierA2785I Sorghum_plumosum_1_Peterson14419_2 Sorghum_plumosum_2_Peterson14419_2 Sorghum_plumosum_3_Peterson14419 Sorghum_sudanense_1_Zhao120 Sorghum_sudanense_2_Zhao120 Sorghum_halepense_4_Liu235 Sorghum_halepense_3_Liu235 Sorghum_halepense_2_Liu235_3 Sorghum_halepense_1_Liu234_2 Sorghum_stipoideum_3_Liu242 Sorghum_stipoideum_1_Fryxell_Craven4025_2 Sorghum_stipoideum_2_Liu242 Sorghum_stipoideum_4_Liu242_3 Sorghum_angustum_2_Specht774 Sorghum_angustum_3_Specht774_2 Sorghum_angustum_1_Blake18599 Sorghum_timorense_2_Lazarides5027_2 Sorghum_timorense_1_Lazarides5021_2 Sorghum_exstans_1_Hartley239 Sorghum_grande_1_Hacker830_2 Sorghum_grande_2_Hacker830 Sorghum_grande_3_Hacker830 Sorghum_grande_4_Hacker830 Sorghum_leiocladum_4_Purdie8329_6 Sorghum_grande_5_Hacker830 Sorghum_grande_6_Hacker830 Sorghum_grande_7_Hacker830 Sorghum_grande_8_Hacker830 Sorghum_leiocladum_3_Miller35_2 Sorghum_leiocladum_2_Miller35 Sorghum_leiocladum_1_Miller35 Sorghum_nitidum_1_Clemens_sn_4 Sorghum_brachypodum_2_Cowie8981 Sorghum_brachypodum_1_Specht1260 Sorghum_amplum_1_Fryxell_Craven4011 Sorghum_propinquum_1_Liu233 Sorghum_drummondii_1_Liu238 Sorghum_drummondii_2_Liu239 Sorghum_bicolor_3_Liu231 Sorghum_bicolor_1_Liu229 Sorghum_bicolor_2_Liu230 Sorghum_versicolor_2_Godfrey1666_2 Sorghum_versicolor_1_Godfrey1666 Sorghum_miliaceum_1_Chut1012 Sorghum_miliaceum_2_Clayton5790 Sorghum_miliaceum_3_Clayton5790 Sorghum_virgatum_1_Silveus2770 Sorghum_arundinaceum_1_Liu232 Sorghum_almum_1_Liu236_2 Sorghum_almum_2_Liu237_2 Sorghum_macrospermum_1_Adams889 Sorghum_macrospermum_2_Adams889 Sorghum_macrospermum_3_Adams889_3 Sorghum_laxiflorum_2_Hartley245 Sorghum_laxiflorum_1_Liu244_2 Bothriochloa_bladhii_1_Liu250_2 Dichanthium_annulatum_1_Liu248_2 Dichanthium_annulatum_2_Liu256 Dichanthium_annulatum_3_Liu256 Chrysopogon_serrulatus_2_Liu255 Chrysopogon_serrulatus_3_Santos6311_3 Chrysopogon_serrulatus_1_Liu255_4 Cleistachne_sorghoides_B1_Jackson_sn Cleistachne_sorghoides_B2_Reekmans12070 Cleistachne_sorghoides_A2_Reekmans12070 Cleistachne_sorghoides_A1_Jackson_sn Sorghastrum_nutans_1_Liu245 Sorghastrum_nutans_2_Liu246 Microstegium_vimineum_3_Liu251 Microstegium_vimineum_4_Liu251_2 Microstegium_vimineum_1_Liu251 Microstegium_vimineum_2_Liu251 ; END; BEGIN CHARACTERS; TITLE waxy0402_TreeBase; DIMENSIONS NCHAR=1501; FORMAT DATATYPE = DNA GAP = - MISSING = ?; MATRIX Sorghum_matarankense_2_Perry2691_3 ATCGTCACGGCATGGACGTCAGCGAGTGGGATCCCAGCAAGGACAAGTACATCACCGTCAAATACGACGTGTCAACGGTGAGCGCGCG-----------TTTCGCCGGCCGATCTGTTGCTGGCTCGGACCGCC---GGTAG-TTCTGAC-GCGGCAAGCA--TGTGCATT---TT-----------------------------------------------------CAGGCCGTGGAGGCGAAGGCGCTGAACAAGGAGGCGTTGCAGGCGGAGGTCGGGCTCCCGGTGGACCGCAAGGTCCCGCTGGTGGCGTTCATCGGCAGGCTGGAGGAGCAGAAGGGCCCCGACGTCATGGCGGCCGCCATCCCGCTGCTCATGGAGGAGGACGTGCAGATCGTCCTGCTGGTACG---------CCGCCGCCCGGCTACTAC-ATC--CATG--TGGC-TGACCTGAGTAT-CTGACTG-GTGTG-----ACAAACACGATGG-ATGCGATG---------------------------------------------------CATGC-AGGGCACGGGCAAGAAGAAGTTCGAGCGCATGCTGATGAGCGCCGAGGAGAAGTACCCGGACAAGGTGCGCGCCGTGGTGAAGTTCAACGCGGCGCTGGCGCACCACATCATGGCCGGTGCCGACCTGCTCGCCGTCACCAGCCGCTTCGAGCCCTGCGGCCTCATCCAGCTCCAGGGGATGCGATACGGAACGGTACTGCCGTCTCTGCCA----------------------------TTCTGAGT-CCT--GAATCCTGATGAA---------------------TGCTTTTC--------------ATTGA----TGTCTGG---------------CGATTCTT---GCAGCCCTGCGCCTGCGCGTCCACCGGCGGACTCGTCGACACCATCATCGAAGGCAAGACCGGGTTCCACATGGG-CCGCCTCAGCGTCGACGTAAGGCCAGC----------TCTGACATGCCCT--GCCCCGCC---ATG--T-TTCTTCTACATAC-TGTGTGAATC--TGAATCAGCCAAGCGA-----------TTCTTGTCT-CGTCCTT--CCTTCCT--CCCCAGTGCAACGTCGTGGAGCCGGCCGACGTCAAG-AAGGTGGCGACCACCATAAAACGCGCCATCAAGGTGGTGGGCACGCCGGCGTACGAGGAGATGGTCAAGAACTGCATGATCCAGGATCTCTCCTGGAAGGT---GCGTTACAGAAC-----AGT-CCCCGTCACAGCACA----GAGCA---------CCAA-----------------GATCG-TC----GATCACACGCGCAC--GTCTC-GCTCGCTCAT--GTTGCTGATTGTGGTGA-------TTT-----TATTTATTTGCTACA-TAA--------TGCAGGGTCCTGCCAAGAACTGGGAGAACAAGG Sorghum_matarankense_1_Perry2691_5 ATCGTCACGGCATGGACGTCAGCGAGTGGGATCCCAGCAAGGACAAGTACATCACCGTCAAATACGACGTGTCAACGGTGAGCGCGCG-----------TTTCGCCGGC-GATCTGTTGCTGGCTCGGACCGCC---GGTGG-TTCTGA-TGCGGCAAGCA--TGTGCATT---TT-----------------------------------------------------CAGGCCGTGGAGGCGAAGGCGCTGAACAAGGAGGCGCTGCAGGCGGAGGTCGGGCTCCCGGTGGACCGCAAGGTCCCGCTGGTGGCGTTCATCGGCAGGCTGGAGGAGCAGAAGGGCCCCGACGTCATGGCGGCCGCCATTCCGCTGCTCATGGAGGAGGACGTGCAGATCGTCCTGCTGGTACG---------CCGCCGCCCGGCTACTAC-ATC--CATG--TGGC-TGACCTGAGTAT-CTGACTG-GTGTG-----ACAAACACGATGG-ATGCGATG---------------------------------------------------CACGC-AGGGCACGGGCAAGAAGAAGTTCGAGCGCATGCTGATGAGCGCCGAGGAGAAGTACCCGGACAAGGTGCGCGCCGTGGTGAAGTTCAACGCGGCGCTGGCGCACCACATCATGGCCGGTGCCGACCTGCTCGCCGTCACCAGCCGCTTCGAGCCCTGCGGCCTCATCCAGCTCCAGGGGATGCGATACGGAACGGTACTGCCATCTCTGCCA----------------------------TTCTGAGT-CCT--GAATCCTGATGAA---------------------TGCTTTTC-ATGTA--------ATTGA----TGTCTGG---------------CGATTCTT---GCAGCCCTGCGCCTGCGCGTCCACCGGCGGACTCGTCGACACCATCATCGAAGGCAAGACCGGGTTCCACATGGG-CCGCCTCAGCGTCGACGTAAGGCCAGC----------TCTGACATACCCT--GCCCCGCC---ATG--T-TTCTTCTACATAC-TGTGTGATTC--TGAATCAGCCAAGCGA-----------TTCTTGTCT-CGTCCTT--CCTTCCT--CCCCAGTGCAACGTCGTGGAGCCGGCCGACGTCAAG-AAGGTGGCGACCACCATAAAACGCGCCATCAAGGTGGTGGGCACGCCGGCGTACGAGGAGATGGTCAAGAACTGCATGATCCAGGATCTCTCCTGGAAGGT---ACGTTACAGG-------------------CAGCACA----GAGCA---------CCAA-----------------GATCG-TC----GATCACACGCGCAC--GTCTC-GCTCGCTCAT--GTTGCTGATTGTGGTGG-------TTT------ATTTATTTGCTAAA-TAA--------TGCAGGGTCCTGCCAAGAACTGGGAGAACAAGG Sorghum_interjectum_1_Perry612 ATCGTCACGGCATGGACGTCAGCGAGTGGGATCCCAGCAAGGACAAGTACATCACCGTCAAATACGACGTGTCAACGGTGAGCGCGCG-----------TTTCGCCGGCCGATCTGTTGCTGGCTCGGACCGCC---GGTGG-TTCTGAC-GCGGCAAGCA--TGTGCATT---TT-----------------------------------------------------CAGGCCGTGGAGGCGAAGGCGCTGAACAAGGAGGCGCTGCAGGCGGAGGTCGGGCTCCCGGTGGACCGCAAGGTCCCGCTGGTGGCGTTCATCGGCAGGCTGGAGGAGCAGAAGGGCCCCGACGTCATGGCGGCCGCCATCCCGCTGCTCATGGAGGAGGACGTGCAGATCGTCCTGCTGGTACG---------CCGCCGCCCGGCTACTGC-ATC--CATG--TGGC-TGACCTGAGTAT-CTGACTG-GTGTG-----ACAAACACGATGG-ATGCGATG---------------------------------------------------CATGC-AGGGCACGGGCAAGAAGAAGTTCGAGCGCATGCTGATGAGCGCGGAGGAGAAGTACCCGGACAAGGTGCGCGCCGTGGTGAAGTTCAACGCGGCGCTGGCGCACCACATCATGGCCGGTGCCGACCTGCTCGCCGTCACCAGCCGCTTCGAGCCCTGCGGCCTCATCCAGCTCCAGGGGATGCGATACGGAACGGTACTGCCATCTCTGCCA----------------------------TTCTGAGT-CCT--GAATCCTGATGAA---------------------TGCTTTTC-ATGTA--------ATTGA----TGTCTGG---------------CGATTCTT---GCAGCCCTGCGCCTGCGCGTCCACCGGCGGACTCGTCGACACCATCATCGAAGGCAAGACCGGGTTCCACATGGG-CCGCCTCAGCGTCGACGTAAGGCCAGC----------TCTGACATACCCT--GCCCCGCC---ATG--T-TTCTTCTACATAC-TGTGTGAATC--TGAATCAGCCAAGCGA-----------TTCTTGTCC-CGTCCTT--CCTTCCT--CCCCAGTGCAACGTCGTGGAGCCGGCCGACGTCAAG-AAGGTGGCGACCACCATAAAACGCGCCATCAAGGTGGTGGGCACGCCGGCGTACGAGGAGATGGTCAAGAACTGCATGATCCAGGATCTCTCCTGGAAGGT---ACGTTACACAGC-----AGT-CCCCGTCACTGCACA----GAGCA---------CCAA-----------------GATCG-TC----GATCACACGCGCAC--GTCTC-GCTCGCTCAT--GTTGCTGATTGTGGTGG-------TTT----TTATTTATTTGCTAAA-TAA--------TGCAGGGTCCTGCCAAGAACTGGGAGAACAAGG Sorghum_intrans_1_CelarierA2785I ATCGTCACGGCATGGACGTCAGTGAGTGGGATCCCAGCAAGGACAAGTACATCACCGTCAAATACGACGTGTCAACGGTGAGCGCGCG-----------TTTCGCCGGCCGATGTGTTGCTGGCTCGGACCGCC---GGTGG-TTCTGAC-GCGGCAAGCA--TGTGCATT---TT-----------------------------------------------------CAGGCAGTGGAGGCGAAGGCGCTGAACAAGGAGGCGCTGCAGGCGGAGGTCGGGCTCCCGGTGGACCGCAAGGTCCCGCTGGTGGCGTTCATCGGCAGGCTGGAGGAGCAGAAGGGCCCCGACGTCATGGCGGCCGCCATCTCGCTGCTCATGGAGGAGGACGTGCAGATCGTCCTGCTGGTACG---------CCGCCGCCCGGCTACTAC-ATC--CATG--TGGC-TGACCTGAGTAT-CTGACTG-GTGTG-----ACAAACACGATGG-ATGCGATG---------------------------------------------------CACGC-AGGGCACGGGCAAGAAGAAGTTCGAGCGCATGCTGATGAGCGCGGAGGAGAAGTACCCGGACAAGGTGCGCGCCGTGGTGAAGTTCAACGCGGCGCTGGCGCACCACATCATGGCCGGTGCCGACCTGCTCGCCGTCACCAGCCGCTTCGAGCCCTGCGGCCTCACCCAGCTCCAGGGGATGCGATACGGAACGGTACTGCCATCTCTGCCA----------------------------TTCTGAGT-CCT--GAATCCTGATGAA---------------------TGCTTTTC-ATGTA--------ATTGA----TGTCTGG---------------CGATTCTT---GCAGCCCTGCGCCTGCGCGTCCACCGGCGGACTCGTCGACACCATCATCGAAGGCAAGACCGGGTTCCACATGGG-CCGCCTCAGCGTCGACGTAAGGCCAGC----------TCTGACATACCCT--GCCCCGCC---ATG--T-TTCTTCTACATAC-TGTGTGAATC--TGAATCAGCCAAGCGA-----------TTCTTGTCC-CGTCCTT--CCTTCCT--CCCCAGTGCAACGTCGTGGAGCCGGCCGACGTCAAG-AAGGTGGCGACCACCATAAAACGCGCCATCAAGGTGGTGGGCACGCCGGCGTACGAGGAGATGGTCAAGAACTGCATGATCCAGGATCTCTCCTGGAAGGT---ACGTTACAGAAC-----AGT-CCCCGTCACAGCACA----GAGCA---------CCAA-----------------GATCG-TC----GATCACACGCGCAC--GTCTC-GCTCGCTCAT--GTTGCTGATTGTGGTGG-------TTT----TTATTTATTTGCTAAA-TAA--------TGCAGGGTCCTGCCAAGAACTGG-AGAACAAGG Sorghum_plumosum_1_Peterson14419_2 AGCTTGCATGCCTGCAGGTCGACTCTAGAGGATAGTCATATGACAAGTACATCACCGTCAAATACGACGTGTCAACGGTGAGCGCGCG-----------TTTCGCCGGCCGATCTGTTGCTGGCTCGGACCGCC---GGTGG-TTCTGAA-GC-GCAAGCA--TGTTCATT---TT-----------------------------------------------------CAGGCCGTGGAGGCGAAGGCGCTGAACAAGGAGGCGCTGCAGGCGGAGGTCGGGCTCCCGGTGGACCGCAAGGTCCCGCTGGTGGCGTTCATCGGCAGGCTGGAGGAGCAGAAGGGCCCCGACGTCATGGCGGCCGCCATCCCGCTGCTCATGGAGGAGGACGTGCAGATCGTCCTGCTGGTACG---------CCGCCGCCCGGCTACTAC-ATC--CATG--TGGC-TGACCTGAGTAT-CTGACTG-GTGTG-----ACAAACACGATGG-ATGCGATG---------------------------------------------------CATGC-AGGGCACGGGCAAGAAGAAGTTCGAGCGCATGCTGATGAGCGCGGAGGAGAAGTACCCGGACAAGGTGCGCGCCGTGGTGAAGTTCAACGCGGCGCTGGCGCACCACATCATGGCCGGTGCCGACCTGCTCGCCGTCACCAGCCGCTTCGAGCCCTGCGGCCTCATCCAGCTCCAGGGGATGCGATACGGAACGGTACTGCCATCTCTGCCA----------------------------TTCTGAGT-CCT--GAATCCTGATGAA---------------------TGATTTTC-ATGTA--------ATTGA----TGTCTGG---------------CGATTCTT---GCAGCCCTGCGCCTGCGCGTCCACCGGCGGACTCGTCGACACCATCATCGAAGGCAAGACCGGGTTCCACATGGG-CCGCCTCAGCGTCGACGTAAGGCCAGC----------TCTGACATGCCCT--GCCCCGCC---ATG--T-TTCTTCTACATAC-TGTGTGAATC--TGAATCAGCCAAGCGA-----------TTCTTGTCT-CGTCCTT--CCTTCCT--CCCCAGTGCAACGTCGTGGAGCCGGCCGACGTCAAG-AAGGTGGCGACCACCATAAAACGCGCCATCAAGGTGGTGGGCACGCCGGCGTACGAGGAGATGGTCAAGAACTGCATGATCCAGGATCTCTCCTGGAAGGT---ACGTTACACAAC-----AGT-CCCCGTCACAGCACAGATC-AGCA---------CCAA-----------------GATCG-TC----GATCACACGCGCAC--GTCTC-GCTCGCTCAT--GTTGCTGATTGTGGTGG-------TTT------ATTTATTTGCTAAAATAA--------TGCAGGGCCCTGCCAAGAACTGGGAGAACAA-- Sorghum_plumosum_2_Peterson14419_2 AGCTTGCATGCCTGCAGGTCGACTCTAGAGGA----CATATGACAAGTACATCACCGTCAAATACGACGTGTCAACGGTGAGCGCGCGCGCGCG-----TTCTGCCGGCCGATCTGTTGCTGGCTCGGACCGGC---GGTGG-TTCTGAC-GCTGCAAG----TGTGCATTAATTT-----------------------------------------------------CAGGCCGTGGAGGCGAAGGCGCTGAACAAGGAGGGGCTGCAGGCGGAGGTCGGGCTCCCGGTGGACCGCAAGGTCCCGCTGGTGGCGTTCATCGGCAGGCTGGAGGAGCAGAAGGGCCCCGACGTCATGGCGGCCGCCATCCCGCTGCTCATGGAGGAGGACGTGCAGATCGTCCTGCTGGTACG---------CCGCCGCCCGGCTACTAC-ATC--CATG--TGGC-TGACCTGAGTAT-CTGACTG-GTGTGTG-TGACAAACACGATGG-ATGCGATG---------------------------------------------------CATGC-AGGGCACGGGCAAGAAGAAGTTCGAGCGCATGCTGATGAGCGCCGAGGAGAAGTACCCGGACAAGGTGCGCGCCGTGGTGAAGTTCAACGCGGCGCTGGCGCACCACATCATAGCCGGTGCTGACCTGCTCGCCGTTACCAGCCGCTTCGAGCCCTGCGGCCTCATCCAGCTCCAGGGGATGCGATACGGAACGGTACTGCCATCTCTGCCA----------------------------TTCTGAGT-CCT--GAACCCTGATGAA---------------------TGCTTTTC-ATGTA--------ATTGA----TGTCTGG---------------CGATTCTT---GCAGCCCTGCGCCTGCGCGTCCACCGGCGGACTCGTCGACACCATCATCGAAGGCAAGACCGGGTTCCACATGGG-CCGCCTCAGCGTCGACGTAAGGCCAGC----------TCTTACATACCCT--GCCCCGTC---ATG--T-TTCTTCTACATAC-TGTGTGAATC--TGAATCAGCCAAGCGA-----------TTCTTGTCT-CGTCCTT--CCTTCCT--CCCCAGTGCAACGTCGTGGAGCCGGCCGACGTCAAG-AAGGTGGCGACCACCATAAAACGCGCCATCAAGGTGGTGGGCACGCCGGCGTACGAGGAGATGGTCAAGAACTGCATGATCCAGGATCTCTCCTGGAAGGT---ACGTTACACAAC-----AGT-CCCCGTCACAGCACAGATC-AGCA---------CCAA-----------------GATCG-TC----GATCACACGCGCAC--GTCTC-GCTCGCTCAT--GTTGCTGATTGTGGTGG-------TTT------ATTTATTTGCTAAAATAA--------TGCAGGGTCCTGCCAAGAACTGGGAGAACAATC Sorghum_plumosum_3_Peterson14419 -----------------------------------------GACAAGTACATCACCGTCAAATACGACGTGTCAACGGTGAGCGCGCG-----------TTTCGCCGGCCGATCTGTTGCTGGCTCGGACCGCC---GGTGG-TTCTGAC-GCGGCAAGCA--TGTGCGTT---TT-----------------------------------------------------CAGGCCGTGGAGGCGAAGGCGCTGAACAAGGAGGCGCTGCAGGCGGAGGTCGGGCTCCCTGTGGACCGCAAGGTCCCGCTGGTGGCGTTCATCGGCAGGCTGGAGGAGCAGAAGGGCCCCGACGTCATGGCGGCCGCCATCCCGCTGCTCATGGAGGAGGACGTGCAGATCGTCCTGCTGGTACG---------CCGCCGCTCGGCTACTAC-ATC--CATG--TGGC-TGACCTGAGTAT-CTGACTG-GTGTG-----ACAAACACGATGG-ATGCGATG---------------------------------------------------CACGC-AGGGCACGGGCAAGAAGAAGTTCGAGCGCATGCTGATGAGCGCCGAGGAGAAGTACCCGGACAAGGTGCGCGCCGTGGTGAAGTTCAACGCGGCGCTGGCGCACCACATCATGGCCGGTGCCGACCTGCTCGCCGTCACCAGCCGCTTCGAGCCCTGCGGCCTCATCCAGCTCCAGGGGATGCGATACGGAACGGTACTGCCATCTCTGCCA----------------------------TTCTGAGT-CCT--GAATCCTGATGAA---------------------TGCTTTTC-ATGTA--------ATTGA----TGTCTGG---------------CGATTCTT---GCAGCCCTGCGCCTGCGCGTCCACCGGCGGACTCGTCGACACCATCATCGAAGGCAAGACCGGGTTCCACATGGG-CCGCCTCAGCGTCGACGTAAGGCCAGC----T-GA--TCTGACATACCCT--GCCCCGCC---ATG--T-TTCTTCTACATAC-TGTGTGAATC--TGAATCAGCCAAGCGA-----------TTCTTGTCT-CGTCCTT--CCTTCCT--CCCCAGTGCAACGTCGTGGAGCCGGCCGACGTCAAG-AAGGTGGCGACCACCATAAAACGCGCCATCAAGGTGGTGGGCACGCCGGCGTACGAGGAGATGGTCAAGAACTGCATGATCCAGGATCTCTCCTGGAAGGT---ACGTTACACAAC-----AGT-CCCCGTCACAGCACA----GAGCA---------CCAA-----------------GATCG-TC----GATCACACGCGCAG--GTCTC-GCTCGCTCAT--GTTGCTGATTGTGGTGG--------------------------------------------------------------------------- Sorghum_sudanense_1_Zhao120 ATCGTCACGGCATGGACGTTAGCGAGCGGGATCCCAGCAAGGGCAAGTACATCGCCGTCAAATACGACGTGTCAGCGGTGAGC-------------------TTTGCCAA------T-T-TGTTGCT--------------------ACTCTGCTCAT--GTAAATCTTTCA------GGCGCTGG-CTCTGA---GTGCAA-----CAA-----TGTCCAT-T----TCAGGCTGTCGAGGCAAAGGCACTGAACAAGGAGGCGCTGCAGGCCGAGGTCGGGCTCCCGGTGGACCGGAAGATCCCGCTGGTGGCGTTCATCGGAAGGCTGGAGGAGCAGAAGGGCCCCGACGTCATGGCGGCCGCCATCCCGCTGCTCATGGAGGAGGACATACAGATCGTTCTGCTGGTACG-------------------CTGGCTGCTA----CATGCATAGC----TAGTGTTACGGGC----ATCAT-A-CCTGAC--TGATCGA--TG-C---------GAATG-------------------------CGATG-----------CATGC-AGGGCACAGGCAAGAAGAAGTTCGAGCGCATGCTGATAAGCGCCGAGGAGAAGTACCCCGACAAGGTGCGCGCCGTGGTCAAGTTCAACGCGGCGCTGGCACACCACATCATGGCCGGCGCCGACCTGCTGGCCGTCACCAGCCGCTTCGAGCCCTGCGGCCTTATCCAGCTCCAGGGGATGCGATACGGAACGGTACGATACGATAC---------------GAGCACTGCAGCAAAA--------TCCCTC----------TGAA---------------------TGATT-CCGATGTG--------GTTGATGGATGTGTGG---------------CGATTCTT---GCAGCCCTGCGCCTGCGCGTCCACCGGCGGACTCGACGACACCATCACCGAAGGCAAGACAGGATTCCACATGGG-CCGCCTCAGCGTCGACGTAAG-C--------TGGACCTCTTGCATACCCT--GCCCTGCC---ATGGATGTTTTTCTACATG----TATAGATC--TGAACCAGCAAAGCAA-----------TTCTTGTTT-CGTCCTC--TCTTCCTCTCCCCAGTGCAACGTCGTGGAGCCGGCCGATGTGAAG-AAGGTGGCGACCACCTTGAAGCGTGCCATCAAGGTGGTCGGCACGCCGGCGCACGAGGAGATGGTCAAGAACTGCATGATCCAGGATCTGTCCTGGAAGGTACGACGT-ACA----GCA------CGCCGTCAGAGCA------GAGCAGAACAC-------TT-------------------------------------------GTCTC-GCTC-CT-----ATTGCTGATTGTGGTGGTGG----TTT----------ATTTGC-AAAATAAT-------T-CAGGGCCCTGCCAAGAACTGGGAGAACAAGG Sorghum_sudanense_2_Zhao120 ATCGTCACGGCATGGACGTCAGCGAGTGGGATCCCAGCAAGGACAAGTACATCGCCGTCAAATACGACGTGTCAACGGTGAGC-------------------TTTGCCAA------T-T-TGTTGCT--------------------ACTCTGCTCAT--GTAAATCTTTCA------GGCGCTGG-TTCTGA---GTGCAA-----CAA-----TGTCCAT-T----TCAGGCTGTCGAGGCAAAGGCACTGAACAAGGAGGCGCTGCAGGCCGAGGTCGGGCTCCCGGTGGACCGGAAGATCCCGCTGGTGGCGTTCATCGGCAGGCTGGAGGAGCAGAAGGGCCCCGACGTCATGGCGGCCGCCATCCCGCTGCTCATGGAGGAGGACATACAGATCGTTCTGCCGGTACG-------------------CTGGCTGCTA----CATGCATAGC----TAGTGTTACGGGC----ATCAT-A-CCTGAC--TGATCGA--TG-C---------GAATG-------------------------CGATG-----------CATGC-AGGGCACTGGCAAGAAGAAGTTCGAGCGCATGCTGATGAGCGCCGAGGAGAAGTACCCCGACAAGGTGCGCGCCGTGGTCAAGTTCAACGCGGCGCTGGCACACCACATCATGGCCGGCGCCGACCTGCTGGCCGTCACCAGCCGCTTCGAGCCCTGCGGCCTCATCCAGCTCCAGGGGATGCGATACGGAACGGTACGATACGATACGATAC----------GAGCACTGCAGCAAAA--------TCCCTC----------TGAA---------------------TGATT-CCGATGTG--------ATTGATGGATGTGTGG---------------CGATTCTT---GCAGCCCTGCGCCTGCGCGTCCACCGGCGGACTCGTCGACACCATCATCGAAGGCAAGACAGGATTCCACATGGG-CCGCCTCAGCGTCGACGTAAG-C--------TGGACCTCTTGCATACCCT--GCCCTGCC---GTGGATGTTTTTCTACATG----TATAGATC--TGAATCAGCAAAGCAA-----------TTCTTGTTT-CGTCCTC--TCTTCCTCTCCCCAGTGCAACGTCGTGGAGCCGGCCGATGTGAAG-AAGGTGGCGACCACCTTGAAGCGTGCCATCAAGGTGGTCGGCACGCCGGCGTACGAGGAGATGGTCAAGGACTGCATGATCCAGGATCTGTCCTAGAAGGTACGACGT-ACA----GCA------CGCCGTCAGAGCA------GAGCAGAACAC-------TT-------------------------------------------GTCTC-GCTC-CT-----ATTGCTGATTGTGGTGGTGG----TTT----------ATTTGC-AAAATAAT-------T-CAGGGCCCTGCCAAGAACTGGGAGAACAAGG Sorghum_halepense_4_Liu235 ATCGTCACGGCATGGACGTCAGCGAGTGGGATCCCAGCAAGGACAAGTACATCGCCGTCAAATACGACGTGTCAACGGTGAGC-----------------------------------TCTGTTGCT-----GGCCCAG-CCGG----CTCGTGTCAATTTCATTATTCCCAGGC---GTCGCTGGGTTCTGA----CGCGG-----CAA----GTGTCCATCTCGT-TCAGGCCGTGGAGGCGAAGGCACTGAACAAGGAGGCGCTGCAGGCCGAGGTCGGGCTCCCGGTGGACCGGAAGATCCCGCTGGTGGCGTTCATCGGCAGGCTGGAGGAGCAGAAGGGCCCCGACGTCATGGCGGCCGCCATCCCGCTGCTCATGGAGGAGGACATACAGATCGTTCTGCTGGTACG-------------------CTGGCTACTT----CATGCATAAC-----AGTGTTACGGGC----ATCAGCAGGACAA---TG--TGGTT-GAC-----CTGACTGAT-------------------------CGATG-----------CATGC-AGGGCACTGGCAAGAAGAAGTTCGAGCGCATGCTGATGAGCGCCGAGGAGAAGTACCCCGACAAGGTGCGCGCCGTGGTCAAGTTCAACGCGGCGCTGGCACACCACATCATGGCCGGCACCGACCTGCTCGCCGTCACCAGCCGCTTCGAGCCCTGCGGCCTCATCCAGCTCCAGGGGATGCGATACGGAACGGTACGATAC--------------------GAGCACTGCAGCAAAAA--------CCCTCTGAAAGTC--TGAA---------------------TGATT-CCGATGTG--------ATTGATGGATGTGTGG---------------CGATTCTT---GCAGCCCTGCGCCTGCGCGTCCACCGGCGGACTCGTCGACACCATCATCGAAGGCAAGACAGGATTCCACATGGG-CCGCCTCAGCGTTGACGTAAG-C--------TGGACCTCTTGCATACCCT--GCCCTGCC---ATGGATGTTTTTCTACATGTAGGTATGGATC--TGAATCAGCAAAGCAA-----------TTCTTGTTT-CGTCCTC--TCTTCCTCTCCCCAGTGCAACGTCGTGGAGCCGGCCGATGTGAAG-AAGGTGGCGACCACCTTGAAGCGTGCCATCAAGGTGGTCGGCACGCCGGCGTACGAGGAGGTGGTCAAGAACTGCATGATCCAGGATCTGTCCTGGAAGGT---ACGT-ACA----GCA------CGCCGTCAGAGCA------GAGCAGAACAC-------TT-------------------------------------------GTCTC-GCTC-CTATT--ATTGCTGATTGTGGTGGTGG----TTT----------ATTTGC-AGAATAAT-------T-CAGGGCCCTGCCAAGAACTGGGAGAACAAGG Sorghum_halepense_3_Liu235 ATCGTCACAGCATGGACGTCAGCGAGTGGGATCCCAGCAAGGACAAGTACATCGCCGTCAAATACGACGTGTCAACGGTGAGC-----------------------------------TCTGTTGCT-----GGCCCAG-CCGG----CTCGTGTCAATTTCATTATTCCCAGGC---GTCGCTGGGTTCTGA----CGCGG-----CAA----GTGTCCATCTCGT-TCAGGCCGTGGAGGCGAAGGCACTGAACAAGGAGGCGCTGCAGGCCGAGGTCGGGCTCCCGGTGGACCGGAAGATCCCGCTGGTGGCGTTCATCGGCAGGCTGGAGGAGCAGAAGGGCCCCGACGTCATGGCGGCCGCCATCCCGCTGCTCATGGAGGAGGACATACAGATCGTTCTGCTGGTACG-------------------CTGGCTACTT----CATGCATAAC-----AGTGTTACGGGC----ATCAGCAGGACAA---TG--TGGTT-GAC-----CTGACTGAT-------------------------CGATG-----------CATGC-AGGGCACTGGCAAGAAGAAGTTCGAGCGCATGCTGATGAGCGCCGAGGAGAAGTACCCCGACAAGGTGCGCGCCGTGGTCAAGTTCAACGCGGCGCTGGCACACCACATCATGGCCGGCACCGACCTGCTCGCCGTCACCAGCCGCTTCGAGCCCTGCGGCCTCATCCAGCTCCAGGGGATGCGATACGGAACGGTACGATAC--------------------GAGCACTGCAGCAAAGA--------CCCTCTGAAAGTC--TGAA---------------------TGATT-CCGATGTG--------ATTGATGGATGTGTGG---------------CGATTCTT---GCAGCCCTGCGCCTGCGCGTCCACCGGCGGACTCGTCGACACCATCATCGAAGGCAAGACAGGATTCCACATGGG-CCGCCTCAGCGTTGACGTAAG-C--------TGGACCTCTTGCATACCCT--GCCCTGCC---ATGGATGTTCTCCTACATGTAGGTATGGATC--TGAATCAGCAAAGCAA-----------TTCTTGTTT-CGTCCTC--TCTTCCTCTCCCCAGTGCAACGTCGTGGAGCCGGCCGATGTGAAG-AAGGTGGCGACCACCTTGAAGCGTGCCATCAAGGTGGTCGGCACGCCGGCGTACGAGGAGATGGTCAAGAACTGCATGATCCAGGATCTGTCCTGGAAGGT---ACGT-ACA----GCA------CGCCGTCAGAGCA------GAGCAGAACAC-------TT-------------------------------------------GTCTC-GCTC-CTATT--ATTGCTGATTGTGGTGGTGG----TTT----------ATTTGC-AAAATAAT-------T-CAGGGCCCTGCCAAGAACTGGGAGAACAAGG Sorghum_halepense_2_Liu235_3 ATCGTCACGGCATGGACGTCAGCGAGTGGGACCCCAGCAAGGACAAGTACATCGCCGTCAAATATGACGTGTCAACGGTGAGC-----------------------------------TCTGTTGCT-----GGCCCAG-CCGG----CTCGTGTCAATTTCATTATTCCCAGGC---GTCGCTGGGTTCTGA----CGCGG-----CAA----GTGTCCATCTCGT-TCAGGCCGTGGAGGCGAAGGCACTGAACAAGGAGGCGCTGCAGGCCGAGGTCGGGCTCCCGGTGGACCGGAAGATCCCGCTGGTGGCGTTCATCGGCAGGCTGGAGGAGCAGAAGGGCCCCGACGTCATGGCGGCCGCCATCCCGCTGCTCATGGAGGAGGACATACAGATCGTTCTGCTGGCACG-------------------CTGGCTACTT----CATGCATAAC-----AGTGTTACGGGC----ATCAGCAGGACAA---TG--TGGTT-GAC-----CTGACTGAT-------------------------CGATG-----------CATGC-AGGGCACTGGCAAGAAGAAGTTCGAGCGCATGCTGATGAGCGCCGAGGAGAAGTACCCCGACAAGGTGCGCGCCGTGGTCAAGTTCAACGCGGCGCTGGCACACCACATCATGGCCGGCGCCGACCTGCTCGCCGTCACCAGCCGCTTCGAGCCCTGCGGCCTCATCCAGCTCCAGGGGATGCGATACGGAACGGTACGATAC--------------------GAGCACTGCAGCAAAAA--------CCCTCTGAAAGTC--TGAA---------------------TGATT-CCGATGTG--------ATTGATGGATGTGTGG---------------CGATTCTT---GCAGCCCTGCGCCTGCGCGTCCACCGGCGGACTCGTCGACACCATCATCGAAGGCAAGACAGGATTCCACATGGG-CCGCCTCAGCGTTGACGTAAG-C--------TGGACCTCTTGCATGCCCT--GCCCTGCC---ATGGATGTTTTTCTACATGTAGGTATGGATC--TGAATCAGCAAAGCAA-----------TTCTTGTTT-CGTCCTC--TCTTCCTCTCCCCAGTGCAACGTCGTGGAGCCGGCCGATGTGAAG-AAGGTGGCGACCACCTTGAAGCGTGCCACCAAGGTGGTCGGCACGCCGGCGTACGAGGAGATGGTCAAGAACTGCATGATCCAGGATCTGTCCTGGAAGGT---ACGT-ACA----GCA------CGCCGTCAGAGCA------GAGCAGAACAC-------TT-------------------------------------------GTCTC-GCTC-CTATT--ATTGCTGATTGTGGTGGTGG----TTT----------ATTTGC-AAAATAAT-------T-CAGGGCCCTGCCAAGAACTGGGAGAACAAGG Sorghum_halepense_1_Liu234_2 ATCGTCACGGCATGGACGTCAGCGAGTGGGATCCCAGCAAGGACGAGTACATCGCCGTCAAATATGACGTGTCAACGGTGAGG-------------------TTTGCCAA------T-T-TGTTGCT--------------------ACTCCGCTCAT--ATAAATCTCCCA------GACGCT-------GA---GTGCAA-----CAA-----TGTCCAT-T----TCAGGCTGTCGAGGCGAAGGCACTGAACAAGGAGGCGCTGCAGGCCGAGGTCGGGCTCCCGGTGGACCGGAAGATCCCGCTGGTGGCGTTCATCGGCAGGCTGGAGGAGCAGAAGGGCCCCGACGTCATGGCGGCCGCCATCCCGCTGCTCATGGAGGAGGACATACAGATCGTTCTGCTGGTACG-------------------CTGGCTACTT----CATGCATAAC-----AGTGTTACGGGC----ATCAGCAGGACAA---TG--TGGTT-GAC-----CTGACTGAT-------------------------CGATG-----------CATGC-AGGGCACTGGCAAGAAGAAGTTCGAGCGCATGCTGATGAGCGCCGAGGAGAAGTACCCCGACAAGGTGCGCGCCGTGGTCAAGTTCAACGCGGCGCTGGCACACCACATCATGGCCGGCACCGACCTGCTCGCCGTCACCAGCCGCTTCGAGCCCTGCGGCCTCATCCAGCTCCAGGGGATGCGATACGGAACGGTACGATAC--------------------GAGCACTGCAGCAAAAA--------CCCTCTGAAAGTC--TGAA---------------------TGATT-CCGATGTG--------ATTGATGGATGTGTGG---------------CGATTCTT---GCAGCCCTGCGCCTGCGCGTCCACCGGCGGACTCGTCGACACCATCATCGAAGGCAAGACAGGATTCCACATGGG-CCGCCTCAGCGTTGACGTAAG-C--------TGGACCTCTTGCATACCCT--GCCCTGCC---ATGGATGTTTTTCTACATGTAGGTATGGATC--TGAATCAGCAAAGCAA-----------TTCTTGTTT-CGTCCTC--TCTTCCTCTCCCCAGTGCAACGTCGTGGAGCCGGCCGATGTGAAG-AAGGTGGCGACCACCTTGAAGCGTGCCATCAAGGTGGTCGGCACGCCGGCGTACGAGGAGATGGTCAAGAACTGCATGATCCAGGATCTGTCCTGGAAGGT---ACGT-ACA----GCA------CGCCGTCAGAGCA------GAGCAGAACAC-------TT-------------------------------------------GTCTC-GCTC-CTATT--ATTGCTGATTGTGGTGGTGG----TTT----------ATTTGC-AAAATAAT-------T-CAGGGCCCTGCCAAGAACTGGGAGAACAAGG Sorghum_stipoideum_3_Liu242 ATCGTCACGGCATGGACGTTAGCGAGTGGGATCCCAGCAAGGACAAGTACATCACCGTCAAATACGACGTGTCAACGGTGAGCGCGCG-----------TTTCGCCGGCCGATCTGTTGCTGGCTCGGACCGCC---GGTGG-TTCTGAC-GCGGCAAGCA--TGCGCATT---TT-----------------------------------------------------CAGGCCGTGGAGGCGAAGGCGCTGAACAAGGAGGCGTTGCAGGCGGAGGTCGGGCTCCCGGTGGACCGCAAGGTCCCGCTGGTGGCGTTCATCGGCAGGCTGGAGGAGCAGAAGGGCCCCGACGTCATGGCGGCCGCCATCCCGCTGCTCATGGAGGAGGACGTGCAGATCGTCCTGCTGGTACG---------CCGCCGCCCGGCAACTACGA----CATGCAT--CTATATAGTGTTGTT---AC---GCCGCTGAGCT----CAC--TGGTATGAGGTT---------------------------------------------------CACGC-AGGGCACGGGCAAGAAGAAGTTCGAGCGCATGCTGATGAGCGCCGAGGAGAAGTACCCGGACATGGTGCGCGCCGTGGTGAAGTTCAACGCGGCGCTGGCGCACCACGTCATGGCCGGCGCCGACCTGCTCGCCGTCACCAGCCGCTTCGAGCCCTGCGGCCTCATCCAGCTCCAGGGGATGCGATACGGAACGGTACTGCCATCTCTGCCA----------------------------TTCTGAGT-CCT--GAATCCTGATGAA---------------------TGCTTTTC--------------ATTGA----TGCC------------------CGATTCTT---GCAGCCCTGCGCCTGCGCGTCCACCGGCGGACTCGTCGACACCATCATCGAAGGCAAGACCGGGTTCCACATGGG-CCGCCTCAGCGTCGACGTAAGGCCAGC----------TCTGACATGCCCT--GCCCCGCC---ATG--T-CTCTTCTACATAC-TGTGTGAATC--TGAATCAGCCAAGCGA-----------TTCTTGTCT-CGTCCTT--CCTTCCT--CCCCAGTGCAACGTCGTGGAGCCGGCCGACGTCAAG-AAGGTGGCGACCACCGTAGAACGCGCCATCAAGGTGGTGGGCACGCCGGCGTACGAGGAGATGGTCAAGAACTGCATGATCCAGGATCTCTCCTGGATGGT---ACGT-----------------------CACAGCACA----GAGCA---------CCAA-----------------GATCG-TC----GATCACACGCGCAC--GTCTC-GCTCGCTCAT--GTTGCTGATTGTGGTGG-------TTT------ATTTATTTGCTAGA-TAA--------TGCAGGGTCCTGCCAAGAACTGGGAGAACAAGG Sorghum_stipoideum_1_Fryxell_Craven4025_2 ATCGTCACGGCATGGACGTCAGCGAGTGGGATCCCAGCAAGGACAAGTACATCACCGTCAAATACGACGTGTCAACGGTGAGCGCGCG-----------TTTCGCCGGCCGATCTGTTGCTGGCTCGGACCGCC---GGTGG-TTCTGAC-GCGGCAAGCA--TGTGCATT---TT-----------------------------------------------------CAGGCCGTGGAGGCGAAGGCGCTGAACAAGGAGGCGTTGCAGGCGGAGGTCGGGCTCCCGGTGGACCGCAAGGTCCCGCTGGTGGCGTTCATCGGCAGGCTGGAGGAGCAGAAGGGCCCCGACGTCATGGCGGCCGCCATCCCGCTGCTCATGGAGGAGGACGTGCAGATCGTCCTGCTGGTACG---------CCGCCGCCCGGCAACTACGA----CATGCAT--CTATATAGTGTTGTT---AC---GTCGCTGAGCT----CAC--TGGTATGAGGAA---------------------------------------------------CACGC-AGGGCACGGGCAAGAAGAAGTTCGAGCGCATGCTGATGAGCGCCGAGGAGAAGTACCCGGACAAGGTGCGCGCCGTGGTGAAGTTCAACGCGGCGCTGGCGCACCACATCATGGCCGGCGCCGACCTGCTCGCCGTCACCAGCCGCTTCGAGCCCTGCGGCCTCATCCAGCTCCAGGGGATGCGATACGGAACGGTACTGCCATCTCTGCCA----------------------------TTCTGAGT-CCT--GAATCCTGATGAA---------------------TGCTTTTC--------------ATTGA----TGCC------------------CGATTCTT---GCAGCCCTGCGCCTGCGCGTCCACCGGCGGACTCGTCGACACCATCATCGAAGGCAAGACCGGGTTCCACATGGG-CCGCCTCAGCGTCGACGTAAGGCCAGC----------TCTGACATGCCCT--GCCCCGCC---ACG--T-TTCTTCTACATAC-TGTGTGAATC--TGAATCAGCCAAGCGA-----------TTCTTGTCT-CGTCCTC--CCTTCCT--CCCCAGTGCAACGTCGTGGAGCCGGCCGACGTCAAG-AAGGTGGCGACCACCATAGAACGCGCCATCAAGGTGGTGGGCACGCCGGCGCACGAGGAGATGGTCAAGAACTGCATGATCCAGGATCTCTCCTGGAAGGT---ACGT-----------------------CACAGCACA----GAGCA---------CCAA-----------------GATCG-TC----GATCACACGCGCAC--GTCTC-GCTCGCTCAT--GTTGCTGATTGTGGTGG-------TTT------ATTTATTTGCTAAA-TAA--------TGCAGGGTCCTGCCAAGAACTGGGAGAACAAGG Sorghum_stipoideum_2_Liu242 ATCGTCACGGCATGGACGTCAGCGAGTGGGATCCCAGCAAGGACAAGTACATCACCGTCAAATACGACGTGTCAACGGTGAGCGCGCG-----------TTTCGCCGGCCGATCTGTTGCTGGCTCGGACCGCC---GGTGG-TTCTGAC-GCGGCAAGCA--TGTGCATT---TT-----------------------------------------------------CAGGCCGTGGAGGCGAAGGCGCTGAACAAGGAGGCGTTGCAGGCGGAGGTCGGGCTCCCGGTGGACCGCAAGGTCCCGCTGGTGGCGTTCGTCGGCAGGCTGGAGGAGCAGAAGGGCCCCGACGTCATGGCGGCCGCCATCCCGCTGCTCATGGAGGAGGACGTGCAGATCGTCCTGCTGGTACG---------CCGCCGCCCGGCAACTACGA----CATGCAT--CTATATAGTGTTGTT---AC---GTCGCTGAGCT----CAC--TGGTATGAGGAA---------------------------------------------------CACGC-AGGGCACGGGCAAGAAGAAGTTCGAGCGCATGCTGATGAGCGCCGAGGAGAAGTACCCGGACAAGGTGCGCGCCGTGGTGAAGTTCAACGCGGCGCTGGCGCACCACATCATGGCCGGCGCCGACCTGCTCGCCGTCACCAGCCGCTTCGAGCCCTGCGGCCTCATCCAGCTCCAGGGGATGCGATACGGAACGGTACTGCCATCTCTGCCA----------------------------TTCTGAGT-CCT--GAATCCTGATGAA---------------------TGCTTTTC--------------ATTGA----TGCC------------------CGATTCTT---GCAGCCCTGCGCCTGCGCGTCCACCGGCGGACTCGTCGACACCATCATCGAAGGCAAGACCGGGTTCCACATGGG-CCGCCTCAGCGTCGACGTAAGGCCAGC----------TCTGACATGCCCT--GCCCCGCC---ATG--T-TTCTTCTACGTAC-TGTGTGAATC--TGAATCAGCCAAGCGA-----------TTCTTGTCT-CGTCCTT--CCTTCCT--CCCCAGTGCAACGTCGTGGAGCCGGCCGACGTCAAG-AAGGTGGCGACCACCATAGAGCGCGCCATCAAGGTGGTGGGCACGCCGGCGTACGAGGAGATGGTCAAGAACTGCATGATCCAGGATCTCTCCTGGAAGGT---ACGT-----------------------CACAGCACA----GAGCA---------CCAA-----------------GATCG-TC----GATCACACGCGCAC--GTCTC-GCTCGCCCAT--GTTACTGATTGTGGTGG-------TTT------AATTATTTGCTAAA-TAA--------TGCAGGGTCCTGCCAAGAACTGGGAGAACAAGG Sorghum_stipoideum_4_Liu242_3 ATCGTCACGGCATGGACGTCAGCGAGTGGGATCCCAGCAAGGACAAGTCCATCACCGTCAAATACGACGTGTCAACGGTGAGCGCGCG-----------TTTCGCCGGCCGATCTGTTGCTGGCTCGGACCGCC---GGTGG-TTCTGAC-GCGGCAAGCA--TGTGCATT---TT-----------------------------------------------------CAGGCCGTGGAGGCGAAGGCGCTGAACAAGGAGGCGTTGCAGGCGGAGGTCGGGCTCCCGGTGGACCGCAAGGTCCCGCTGGTGGCGTTCATCGGCAGGCTGGAGGAGCAGAAGGGCCCCGACGTCATGGCGGCCGCCATCCCGCTGCTCATGGAGGAGGACGTGCAGATCGTCCTGCTGGTACG---------CCGCCGCCCGGCAACTACGA----CATGCAT--CTATATAGTGTTGTT---AC---GTCGCTGAGCT----CAC--TGGTATGAGGAA---------------------------------------------------CACGC-AGGGCACGGGCAAGAAGAAGTTCGAGCGCATGCTGATGAGCGCCGAGGAGAAGTACCCGGACAAGGTGCGCGCCGTGGTGAAGTTCAACGCGGCGCTGGCGCACCACATCATGGCCGGCGCCGACCTGCTCGCCGTCACCAGCCGCTTCGAGCCCTGCGGCCTCATCCAGCTCCAGGGAATGCGATACGGAACGGTACTGCCATCTCTGCCA----------------------------TTCTGAGT-CCT--GAATCCTGATGAA---------------------TGCTTTTC--------------ATTGA----TGCC------------------CGATTCTT---GCAGCCCTGCGCCTGCGCGTCCACCGGCGGACTCGTCGACACCATCATCGAAGGCAAGACCGGGTTCCACATGGG-CCGCCTCAGCGTCGACGTAAGGCCAGC----------TCTGACATGCCCT--GCCCCGCC---ATG--T-TTCTTCTACATAC-TGTGTGAATC--TGAATCAGCCAAGCGA-----------TTCTTGTCT-CGTCCTT--CCTTCCT--CCCCAGTGCAACGTCGTGGAGCCGGCCGACGTCAGG-AAGGTGGCGACCACCATAGAACGCGCCATCAAGGTGGTGGGCACGCCGGCGTACGAGGAGATGGTCAAGAACTGCATGATCCAGGATCTCTCCTGGAAGGT---ACGT-----------------------CACAGCACA----GAGCA---------CCAA-----------------GATCG-TC----GATCACACGCGCAC--GTCTC-GCTCGCTCAT--GTTGCTGATTGTGGTGG-------TTT------ATTTATTTGCTAAA-TAA--------TGCAGGGTCCTGCCAAGAACTGGGAGAACAAGG Sorghum_angustum_2_Specht774 ATCGTCACGGCATGGACGTCAGCGAGTGGGATCCCAGCAAGAACAAGTACATCACCGTCAAATACGACGTGTCAACGGTGAG---GCG-----------TTTCGCCGGACGATGTGTTGCTGGCTCGGACCGCC---GGTGG-TTCTGAC-GCGGCAAGCA--TGTGCATT---TT-----------------------------------------------------CAGGCCGTGGAGGCGAAGGCGCTGAACAAGGAGGCGCTGCAGGCGGAGGTCGGGCTCCCGGTGGACCGCAAGGTCCCGCTGGTGGCGTTCATCGGCAGGCTGGAGGAGCAGAAGGGCCCCGACGTCATGGCGGCCGCCATCCCGCTGCTCATGGAGGAGGACGTGCAGATCGTCCTGCTGGTACG---------CCGCCGCCCGGCAACTACGA----CATGCAT--CTATATAGTGTTGTT---AC---GTCGCTGAGCT----CAC--TGGTATGAGGAA---------------------------------------------------CACGC-AGGGCACGGGCAAGAAGAAGTTCGAGCGCATGCTGATGAGCGCGGAGGAGAAGTACCCGGACAAGGTGCGCGCCGTGGTGAAGTTCAACGCGGCGCTGGCGCACCACATCATGGCCGGTGCCGACCTGCTCGCCGTCACCAGCCGCTTCGAGCCCTGCGGCCTCATCCAGCTCCAGGGGATGCGATACGGAACGGTACTGCCATCTCTGCCA----------------------------TTCTGAGT-CCT--GAATCCTGATGAA---------------------TGCTTTTC--------------ATTGA----CGTCTGG---------------CGATTCTT---GCAGCCCTGCGCCTGCGCGTCCACCGGCGGACTCGTCGACACCATCATCGAAGGCAAGACCGGGTTCCACATGGG-CCGCCTCAGCGTCGACGTAAGGCCAGC----------TCTGACATACCCT--GCCCCGCC---ATG--T-TTCTCCTACATAC-TGTGTGAATC--TGAATCAGCCAAGCGA-----------CTCTTGTCT-CGTCCTT--CCTTCCT--CCCCAGTGCAACGTCGTGGAGCCGGCCGACGTCAAG-AAGGTGGCGACCACCATAAAACGCGCCATCAAGGTGGTGGGCACGCCGGCGTACGAGGAGATGGTCAAGAACTGCATGATCCAGGATCTCTCCTGGAAGGT---AGGTTACAGAAC-----AGT-CCCCGTCACAGCACA----GAGCA---------CCAA-----------------GATCT-TC----GATCACACGCGCAC--GTCTC-GCTCGCTCAT--GTTGCCGATTGTGGTGG-------TTT----TTATTTATCTGGTAAA-TAA--------TGCAGGGCCCCGTCCAGACC-GTGAGAACAAGG Sorghum_angustum_3_Specht774_2 ATCGTCACGGCATGGACGTCAGCGAGTGGGATCCCAGCAAGAACAAGTACATCACCGTCAAATACGACGTGTCAACGGTGAGCGCGCG-----------TTTCGCCGGCCGATGTGTTGCTGGCTCGGACCGCC---GGTGG-TTCTGAC-GCGGCAAGCA--TGTGCATT---TT-----------------------------------------------------CAGGCCGTGGAGGCGAAGGCGCTGAACAAGGAGGCGCTGCAGGCGGAGGTCGGGCTCCCGGTGGACCGCAAGGTCCCGCTGGTGGCGTTCATCGGCAGGCTGGAGGAGCAGAAGGGCCCCGACGTCATGGCGGCCGCCATCCCGCTGCTCATGGAGGAGGACGTGCAGATCGTCCTGCTGGTACG---------CCGCCGCCCGGCAACTACGA----CATGCAT--CTATATAGTGTTGTT---AC---GTCGCTGAGCT----CAC--TGGTATGAGGAA---------------------------------------------------CACGC-AGGGCACGGGCAAGAAGAAGTTCGAGCGCATGCTGATGAGCGCGGAGGAGAAGTACCCGGACAAGGTGCGCGCCGTGGTGAAGTTCAACGCGGCGCTGGCGCACCACATCATGGCCGGTGCCGACCTGCTCGCCGTCACCAGCCGCTTCGAGCCCTGCGGCCTCATCCAGCTCCAGGGGATGCGATACGGAACGGTACTGCCATCTCTGCCA----------------------------TTCTGAGT-CCT--GAATCCTGATGAA---------------------TGCTTTTC--------------ATTGA----CGTCTGG---------------CGATTCTT---GCAGCCCTGCGCCTGCGCGTCCACCGGCGGACTCGTCGACACCATCATCGAAGGCAAGACCGGGTTCCACATGGG-CCGCCTCAGCGTCGACGTAAGGCCAGC----------TCTGACATACCCT--GCCCCGCC---ATG--T-TTCTCCTACATAC-TGTGTGAATC--TGAATCAGCCAAGCGA-----------CTCTTGTCT-CGTCCTT--CCTTCCT--CCCCAGTGCAACGTCGTGGAGCCGGCCGACGTCAAG-AAGGTGGCGACCACCATAAAACGCGCCATCAAGGTGGTGGGCACGCCGGCGTACGAGGAGATGGTCAAGAACTGCATGATCCAGGATCTCTCCTGGAAGGT---AGGTTACAGAAC-----AGT-CCCCGTCACAGCACA----GAGCA---------CCAA-----------------GATCG-TC----GATCACACGCGCAC--GTCTC-GCTCGCTCAT--GTTGCTGATTGTGGTGG-------TTT----TTATTTATTTGCTAAA-TAA--------TGCAGGGCCCTGCCAAGAACTGGGAGAACAAGG Sorghum_angustum_1_Blake18599 ATCGTCACGGCATGGACGTCAGCGAGTGGGATCCCAGCAAGAACAAGTACATCACCGTCAAATACGACGTGTCAACGGTGAGCGCGCG-----------TTTCGCCGGCCGATGTGTTGCTGGCTCGGACCGCC---GGTGG-TTCTGAC-GCGGCAAGCA--TGTGCATT---TT-----------------------------------------------------CAGGCCGTGGAGGCGAAGGCGCTGAACAAGGAGGCGCTGCAGGCGGAGGTCGGGCTCCCGGTGGACCGCAAGGTCCCGCTGGTGGCGTTCATCGGCAGGCTGGAGGAGCAGAAGGGCCCCGACGTCATGGCGGCCGCCATCCCGCTGCTCATGGAGGAGGACGTGCAGATCGTCCTGCTGGTACG---------CCGCCGCCCGGCAACTACGA----CATGCAT--CTATATAGTGTTGTT---AC---GTCGCTGAGCT----CAC--TGGTATGAAGAA---------------------------------------------------CACGC-AGGGCACGGGCAAGAAGAAGTTCGAGCGCATGCTGATGACCGCGGAGGAGAAGTACCCGGACAAGGTGCGCGCCGTGGTGAAGTTCAACGCGGCGCTGGCGCACCACATCATGGTCGGTGCCGACCTGCTCGCCGTCACCAGCCGCTTCGAGCCCTGCGGCCTCATCCAGCTCCAGGGGATGCGATACGGAACGGTA-TGCCATCTCTGCCA----------------------------TTGTGAGT-CCT--GAATCCTGATGAA---------------------TGCTTTTC--------------ATTGA----GGTCTGG---------------CGATTCTT---GCAGCCCTGGGCCTGCGCGTCCACCGGCGGACTCGTCGACACCATCATCGAAGGCAAGACCGGGTTCCACATGGG-CCGCCTCAGCGTCGACGTAAGGCCAGC----------TCTGACATACCCT--GCCCCGCC---ATG--T-TTCTCCTACATAC-TGTGGGAATC--TGAATCAGCCAAGCGA-----------CTCTTGTCT-CGTCCTT--CCTTCCT--CCCCAGTGCAACGTCGTGGAGCCGGCCGACGTCAAG-AAGGTGGCGACCACCATAAAACGCGCCATCAAGGTGGTGGGCACGCCGGCGTACGAGGAGATGGTCAAGAACTGCATGATCCAGGATCTCTCCTGGAAGGT---AGGTTACAGAAC-----AGT-CCCCGTCACAGCACA----GAGCA---------CCAA-----------------GATCG-TC----GATCACACGCGCAC--GTCTC-GCTCGCTCAT--GTTGCTGATTGTGGTGG-------TTT----TTATTTATTTGCTAAA-TAA--------TGCAGGGCCCTGCCAAGAACTGGGAGAACAAGG Sorghum_timorense_2_Lazarides5027_2 ATCGTCACGGCATGGACGTCAGCAAGTGGGATCCCAGCAAGGACAAGTACATCACCGTCAAATACGACGTGTCAACGGTGAGCGCGCG-----------TTTCGCCGGCCGATCTGTTGCTGGCTCGGACCGCC---GGTGG-TTCTGAC-GCGGCAAGCA--TGTGCATT---TT-----------------------------------------------------CAGGCCGTGGAGGCGAAGGCGCCGAACAAGGAGGCGCTGCAGGCGGAGGTCGGGCTCCCGGTGGACCGCAAGGTCCCGCTGGTGGCGTTCATCGGCAGGCTGGAGGAGCAGAAGGGCCCCGACGTCATGGCGGCCGCCATCCCGCTGCTCATGGAGGAGGACGTGCAGATCGTCCTGCTGGTACG---------CCGCCGCCCGGCAACTACGA----CATGCAT--CTATATAGTGTTGTT---AC---GTCGCTGAGCT----CAC--TGGTATGAGGAA---------------------------------------------------CACGC-AGGGCACGGGCAAGAAGAAGTTCGAGCGCATGCTGATGAGCGCCGAGGAGAAGTACCCGGACAAGGTGCGCGCCGTGGTGAAGTTCAACGCGGCGCTGGCGCACCACATCATGGCCGGTGCCGACCTGCTCGCCGTCACCAGCCGCTTCGAGCCCTGCGGTCTCATCCAGCTCCAGGGGATGCGATACGGAACGGTACTGCCATCCCTGCCAA---------------------------TTCTGAGT-CCT--GAATCCTGATTAA---------------------TGCTTTTC-ATGTA--------ATTGA----TGTCTGA---------------CGATTCTT---GCAGCCCTGCGCCTGCGCGTCCACCGGCGGACTCGTCGACACCATCATCGAAGGCAAGACCGGGTTCCACATGGG-CCGCCTCAGCGTCGACGTAAGGCCAGC----------TCTGACATACCCT--GCCCCGCC---ATG--T-TTCTTCTACATAC-TGTGTGATTC--TGAATCAGCCAAGCGA-----------TTCTTGTCT-CGTCCTT--CCTTCCT--CCCCAGTGCAACGTCGTGGAGCCGGCCGACGTCAAG-AAGGTGGCGACCACCATAAAACGCGCCATCAAGGTGGTGGGCACGCCGGCGTACGAGGGGATGGTCAAGAACTGCATGATCCAGGATCTCTCCTGGAAGGT---ACGTTACAGAAC-----AGT-CCCCGTCACAGCACAGATC----A---------CCAA-----------------GATCG-TC----GATCACACGCGCAC--GCCTC-GCTCGCTCAT--GTTGCTGATTGTGGTGG-------TT------TATTTATTTGCTAAA-TAA--------TGCAGGGTCCTGCCAAGAACTGGGAGAACAAGG Sorghum_timorense_1_Lazarides5021_2 ATCGTCACGGCATGGACGTCAGCGAGTGGGATCCCAGCAAGGACAAGTACATCACCGTCAAATACGACGTGTCAACGGTGAGCGCGCG-----------TTTCGCCGGCCGATCTGTTGCTGGCTCGGACCGCC---GGTGG-TTCTGAC-GCGGCAAGCA--TGTGCATT---TT-----------------------------------------------------CAGGCCGTGGAGGCGAAGGCGCTGAACAAGGAGGCGCTGCAGGCGGAGGTCGGGCTCCCGGTGGACCGCAAGGTCCCGCTGGTGGCGTTCATCGGCAGGCTGGAGGAGCAGAAGGGCCCCGACGTCATGGCGGCCGCCATCCCGCTGCTCATGGAGGAGGACGTGCAGATCGTCCTGCTGGTACG---------CCGCCGCCCGGCAACTACGA----CATGCAT--CTATATAGTGTTGTT---AC---GTCGCTGAGCT----CAC--TGGTATGAGGAA---------------------------------------------------CACGC-AGGGCACGGGCAAGAAGAAGTTCGAGCGCATGCTGATGAGCGCCGAGGAGAAGTACCCGGACAAGGTGCGCGCCGTGGTGAAGTTCAACGCGGCGCTGGCGCACCACATCATGGCCGGTGCCGACCTGCTCGCCGTCACCAGCCGCTTCGAGCCCTGCGGTCTCATCCAGCTCCAGGGGATGCGATACGGAACGGTACTGCCATCTCTGCCAA---------------------------TTCTGAGT-CCT--GAATCCTGATTAA---------------------TGCTTTTC-ATGTA--------ATTGA----TGTCTGG---------------CGATTCTT---GCAGCCCTGCGCCTGCGCGTCCACCGGCGGACTCGTCGACACCATCATCGAAGGCAAGACCGGGTTCCACATGGG-CCGCCTCAGCGTCGACGTAAGGCCAGC----------TCTGACATACCCT--GCCCCGCC---ATG--T-TTCTTCTACATAC-TGTGTGATTC--TGAATCAGCCAAGCGA-----------TTCTTGTCT-CGTCCTT--CCTTCCT--CCCCAGTGCAACGTCGTGGAGCCGGCCGACGTCAAG-AAGGTGGCGACCACCATAAAACGCGCCATCAAGGTGGTGGGCACGCCGGCGTACGAGGAGATGGTCAAGAACTGCATGATCCAGGATCTCTCCTGGAAGGT---ACGTTACAGAAC-----AGT-CCCCGTCACAGCACAGATC----A---------CCAA-----------------GATCG-TC----GATCACACGCGCAC--GTCTC-GCTCGCTCAT--GTTGCTGATTGTGGTGG-------TTT------ATTTATTTGCTAAA-TAA--------TGCAGGGTCCTGCCAAGAACTGGGAGAACAAGG Sorghum_exstans_1_Hartley239 ATCGTCACGGCATGGACGTCAGCGAGTGGGATCCCAGCAAGGACAAGTACATCACCGTCAAATACGACGTGTCAACGGTGAGCGCGCG-----------TTTCGCCGGCCGATCTGTTGCTGGCTCGGACCGCC---GGTGG-TTCTGAC-GCGGCAAGCA--TGTGCATT---TT-----------------------------------------------------CAGGCCGTGGGGGCGAAGGCGCTGAACAAGGAGGCGCTGCAGGCGGAGGTCGGGCTCCCGGTGGACCGCAAGGTCCCGCTGGTGGCGTTCATCGGCAGGCTGGAGGAGCAGAAGGGCCCCGACGTCATGGCGGCCGCCATCCCGCTGCTCATGGAGGAGGACGTGCAGATCGTCCTGCTGGTACG---------CCGCCGCCCGGCAACTACGA----CATGCAT--CTATATAGTGTTGTT---AC---GTCGCTGAGCT----CAC--TGGTATGAGGAA---------------------------------------------------CACGC-AGGGCACGGGCAAGAAGAAGTTCGAGCGCATGCTGATGAGCGCGGAGGAGAAGTACCCGGACAAGGTGCGCGCCGTGGTGAAGTTCAACGCGGCGCTGGCGCACCACATCATGGCCGGTGCCGACCTGCTCGCCGTCACCAGCCGCTTCGAGCCCTGCGGCCTCATCCAGCTCCAGGGGATGCGATACGGAACGGTACTGCCATCTCTGCCA----------------------------TTCTGAGT-CCT--GAATCCTGATGAA---------------------TGCTTTTC--------------ATTGA----TGTCTGG---------------CGATTCTT---GCAGCCCTGCGCCTGCGCGTCCACCGGCGGACTCGTCGACACCATCATCGAAGGCAAGACCGGGTTCCACATGGG-CCGCCTCAGCGTCGACGTAAGGCCAGC----T-GA--TCTGACATATCCT--GCCCCGCC---ATG--T-TTCTTCTACATAC-TGTGTGAATC--TGAATCAGCCAAGCGA-----------TTCTTGTCT-CGTCCTT--CCTTCCT--CCCCAGTGCAACGTCGTGGAGCCGGCCGACGTCAAG-AAGGTGGCGACCACCATAAAACGCGCCATCAAGGTGGTGGGCACGCCGGCGTACGAGGAGATGGTCAAGAACTGCATGATCCAGGATCTCTCCTGGAAGGT---ACGTTACAGC------------------ACAG---------AGCA---------CCAA-----------------GATCG-TC----GATCACACGCGCAC--GTCTC-GCTCGCTCAT--GTTGCTGATTGTGGTGG-------TTT------ATTTATTTGCTAAA-TTA--------TGCAGGGTCCTGCCAAGAACTGGGAGAACAAGG Sorghum_grande_1_Hacker830_2 ---------------------------------------------AGTACATCACCGTCAAATACGACGTGTCAACGGTGAGCGCGCGCGCGCG-----TTCTGCCGGCCGATCTGTTGCTGGCTCGGACCGGC---GGTGG-TTCTGAC-GCTGCAAG----TGTGCATTAATTT-----------------------------------------------------CAGGCCGTGGAGGCGAAGGCGCTGAACAAGGAGGCGCTGCAGGCGGAGGTCGGGCTCCCGGTGGACCGCAAGGTCCCGCTGGTGGCGTTCATCGGCAGGCTGGAGGAGCAGAAGGGCCCGGACGTCATGGCGGCCGCCATCCCGCTGCTCATGGAGGAGGACGTGCAGATCGTCCTGCTGGTACG---------CCGCCGCCCGGCAACTGCGA----CATGCAT--CTATATAGTGTTGTT---AC---GTCGCTGAGCT----CAC--TGGTATGAGGAA---------------------------------------------------CACGC-AGGGCACGGGCAAGAAGAAGTTCGAGCGCATGCTGATGAGCGCGGAGGAGAAGTACCCGGACAAGGTGCGCGCCGTGGTGAAGTTCAACGCGGCGCTGGCGCACCACATCATGGCCGGTGCCGACCTGCTCGCCGTCACCAGCCGCTTCGAGCCCTGCGGCCTCATCCAGCTCCAGGGGATGCGATACGGAATGGTACTGCCATCTCTGCCA----------------------------TTCTGAGT-CCT--GAATCCTGATGAA---------------------TGCTTTTC-ATGTA--------ATTGA----TGTCTGG---------------CGATTCTT---GCAGCCCTGCGCCTGCGCGTCCACCGGCGGACTCGTCGACACCATCATCGAAGGCAAGACCGGGTTCCACATGGG-CCGCCTCAGCGTCGACGTAAGGCCAAC----T-GA--TCTGACATACCCT--GCCCCGCC---ATG--T-TTCTTCTACATAC-TGTGTGAATC--TGAATCAGCCAAGCGA-----------TTCTTGTCT-CGTCCTT--CCTTCCT--CCCCAGTGCAACGTCGTGGAGCCGGCCGACGTCAAGAAAGGTGGCGACCACCATAAAACGCGCCATCAAGGTGGTGGGCACGCCGGCGTACGAGGAGATGGTCAAGAACTGCATGATCCAGGATCTCTCCTGGAAGGT---ACGTTACACAAC-----AGT-CCCCGTCACAGCACAGATC-AGCA---------CCAA-----------------GATCG-TC----GATCACACGCGCAC--GTCTC-GCTCGCTCAT--GATGCTGATTGTGGTGG-------TTTAT--------------------------------------------------------------- Sorghum_grande_2_Hacker830 ---------------------------------------------AGTACATCACCGTC-AATACGACGTGTCAACGGTGAGCGCGCGCGCGCG-----TTCTGCCGGCCGATCTGTTGCTGGCTCGGACCGGC---GGTGG-TTCTGAC-GCTGCAAG----TGTGCATTAATTT-----------------------------------------------------CAGGCCGTGGAGGCGAAGGCGCTGAACAAGGAGGCGCTGCAGGCGGAGGTCGGGCTCCCGGTGGACCGCAAGGTCCCGCTGGTGGCGTTCATCGGCAGGCTGGAGGAGCAGAAGGGCCCGGACGTCATGGCGGCCGCCATCCCGCTGCTCATGGAGGAGGACGTGCAGATCGTCCTGCTGGTACG---------CCGCCGCCCGGCAACTACGA----CATGCAT--CTATATAGTGTTGTT---AC---GTCGCTGAGCT----CAC--TGGTATGAGGAA---------------------------------------------------CACGC-AGGGCACGGGCAAGAAGAAGTTCGAGCGCATGCTGATGAGCGCGGAGGAGAAGTACCCGGACAAGGTGCGCGCCGTGGTGAAGTTCAACGCGGCGCTGGCGCACCACATCATGGCCGGTGCCGACCTGCTCGCCGTCACCAGCCGCTTCGAGCCCTGCGGCCTCATCCAGCTCCAGGGGATGCGATACGGAACGGTACTGCCATCTCTGCCA----------------------------TTATGAGT-CCT--GAATCCTGATGAA---------------------TGCTTTTC-ATGTA--------ATTGA----TGTCTGG---------------CGATTCTT---GCAGCCCTGCGCCTGCGCGTCCACCGGCGGACTCGTCGACACCATCATCGAAGGCAAGACCGGGTTCCACATGGG-CCGCCTCAGCGTCGACGTAAGGCCAAC----T-GA--TCTGACATACCCT--GCCCCGCC---ATG--T-TTCTTCTACATAC-TGTGTGAATC--TGAATCAGCCAAGCGA-----------TTCTTGTCT-CGTCCTT--CCTTCCT--CCCCAGTGCAACGTCGTGGAGCCGGCCGACGTCAAG-AAGGTGGCGACCACCATAAAACGCGCCATCAAGGTGGTGGGCACGCCGGCGTACGAGGAGATGGTCAAGAACTGCATGATCCAGGATCTCTCCTGGAAGGT---ACGTTACACAAC-----AGT-CCCCGTCACAGCACAGATC-AGCA---------CCAA-----------------GATCG-TC----GATAGCACGCGCAC--GTCTC-GCTCGCTCAT--GTTGCTGATTGTGGTGG-------TT------------------------------------------------------------------ Sorghum_grande_3_Hacker830 ATCGTCACGGCATGGACGTCAGCGAGTGGGATCC-AGCAAGGACAAGTACATCACCGTCAAATACGACGTGTCAACGGTGAGCGCGCGCGCGCG-----TTCTGCCGGCCGATCTGTTGCTGGCTCGGACCGGC---GGTGG-TTCTGAC-GCTGCAAG----TGTGCATTAATTT-----------------------------------------------------CAGGCCGTGGAGGCGAAGGCGCTGAACAAGGAGGCGCTGCAGGCGGAGGTCGGGCTCCCGGTGGACCGCAAGGTCCCGCTGGTGGCGTTCATCGGCAGGCTGGAGGAGCAGAAGGGCCCGGACGTCATGGCGGCCGCCATCCCGCTGCTCATGGAGGAGGACGTGCAGATCGTCCTGCTGGTACG---------CCGCCGCCCGGCAACTACGA----CATGCAT--CTATATAGTGTTGTT---AC---GTCGCTGAGCT----CAC--TGGTATGAGGAA---------------------------------------------------CACGC-AGGGCACGGGCAAGAAGAAGTTCGAGCGCATGCTGATGAGCGCGGAGGAGAAGTACCCGGACAAGGTGCGCGCCGTGGTGAAGTTCAACGCGGCGCTGGCGCACCACATCATGGCCAGTGCCGACCTGCTCGCCGTCACCAGCCGCTTCGAGCCCTGCGGCCTCATCCAGCTCCAGGGGATGCGATACGGAACGGTACTGCCATCTCTGCCA----------------------------TTCTGAGT-CCT--GAATCCTGATGAA---------------------TGCTTTTC-ATGTA--------ATTGA----TGTCTGG---------------CGATTCTT---GCAGCCCTGCGCCTGCGCGTCCACCGGCGGACTCGTCGACACCATCATCGAAGGCAAGACCGGGTTCCACATGGG-CCGCCTCAGCGTCGACGTAAGGCCAAC----T-GA--TCTGACATACCCT--GCCCCGCC---ATG--T-TTCTTCTACATAC-TGTGTGAATC--TGAATCAGCCAAGCGA-----------TTCTTGTCT-CGTCCTT--CCTTCCT--CCCCAGTGCAACGTCGTGGAGCCGGCCGACGTCAAG-AAGGTGGCGACCACCATAAAACGCGCCATCAAGGTGGTGGGCACGCCGGCGTACGAGGAGATGGTCAAGAACTGCATGATCCAGGATCTCTCCTGGAAGGT---ACGTTACACAAC-----AGT-CCCCGTCACAGCACAGATC-AGCA---------CCAA-----------------GATCG-TC----GATCACACGCGCAC--GTCTC-GCTCGCTCAT--GTTGCTGATTGTGGTGG-------TTT------ATTTATTTGCTAAAATAA--------TGCAGGGTCCTGCCAAGAACTGGGAGAACAATC Sorghum_grande_4_Hacker830 ATCGTCACGGCATGGACGTCAGCGAGTGGGATCCCAGCAAGGACAAGTACATCACCGTCAAATACGACGTGTCAACGGTGAGCGCGCGCGCGCG-----TTCTGCCGGCCGATCTGTTTCTGGCTCGGACCGGC---GGTGG-TTCTGAC-GCTGCAAG----TGCGCATTAATTT-----------------------------------------------------CAGGCCGTGGAGGCGAAGGCGCTGAACAAGGAGGCGCTGCAGGCGGAGGTCGGGCTCCCGGTGGACCGCAAGGTCCCGCTGGTGGCGTTCATCGGCAGGCTGGAGGAGCAGAAGGGCCCGGACGTCATGGCGGCCGCCATCCCGCTGCTCATGGAGGAGGACGTGCAGATCGTCCTGCTGGTACG---------CCGCCGCCCGGCAACTACGA----CATGCAT--CTATATAGTGTTGTT---AC---GTCGCTGAGCT----CAC--TGGTATGAGGAA---------------------------------------------------CACGC-AGGGCACGGGCAAGAAGAAGTTCGAGCGCATGCTGATGAGCGCGGAGGAGAAGTACCCGGACAAGGTGCGCGCCGTGGTGAAGTTCAACGCGGCGCTGGCGCACCACATCATGGCCGGTGCCGACCTGCTCGCCGTCACCAGCCGCTTCGAGCCCTGCGGCCTCATCCAGCTCCAGGGGATGCGATACGGAACGGTACTGCCATCTCTACCA----------------------------TTCTGAGT-CCT--GAATCCTGATGAA---------------------TGCTTTTC-ATGTA--------ATTGA----TGTCTGG---------------CGATTCTT---GCAGCCCTGCGCCTGCGCGTCCACCGGCGGACTCGTCGACACCATCATCGAAGGCAAGACCGGGTTCCACATGGG-CCGCCTCAGCGTCGACGTAAGGCCAAC----T-GA--TCTGACATACCCT--GCCCCGCC---ATG--T-TTCTTCTACATAC-TGTGTGAATC--TGAATCAGCCAAGCGA-----------TTCTTGTCT-CGTCCTT--CCTTCCT--CCCCAGTGCAACGTCGTGGAGCCGGCCGACGTCAAG-AAGGTGGCGACCACCATAAAACGCGCCATCAAGGTGGTGGGCACGCCGGCTTACGAGGAGATGGTCAAGAACTGCATGATCCAGGATCTCTCCTGGAAGGT---ACGTTACACAAC-----AGT-CCCCGTCACAGCACAGATC-AGCA---------CCAA-----------------GATCG-TC----GATCACACGCGCAC--GTCTC-GCTCGCTCAT--GTTGCTGATTGTGGTGG-------TTT------ATTTATTTGCTAAAATAA--------TGCAGGGTCCTGCCAAGAACTGGGAGAACAATC Sorghum_leiocladum_4_Purdie8329_6 ---------------------------------------------AGTACATCACCGTCAAATACGACGTGTCAACGGTGAGCGCGCGCGCGCG-----TTCTGCCGGCCGATCTGTTGCTGGCTCGGACCGGC---GGTGG-TTCTGAC-GCTGCAAG----TGTGCATTAATTT-----------------------------------------------------CAGGCCGTGGAGGCGAAGGCGCTGAACAAGGAGGCGCTGCAGGCGGAGGTCGGGCTCCCGGTGGACCGCAAGGTCCCGCTGGTGGCGTTCATCGGCAGGCTGGAGGAGCAGAAGGGCCCGGACGTCATGGCGGCCGCCATCCCGCTGCTCATGGAGGAGGACGTGCAGATCGTCCTGCTGGTACG---------CCGCCGCCCGGCAACTACGA----CATGCAT--CTATATAGTGTTGTT---AC---GTCGCTGAGCT----CAC--TGGTATGAGGAA---------------------------------------------------CACGC-AGGGCACGGGCAAGAAGAAGTTCGAGCGCATGCTGATGAGCGCGGAGGAGAAGTACCCGGACAAGGTGCGCGCCGTGGTGAAGTTCAACGCGGCGCTGGCGCACCACATCATGGCCAGTGCCGACCTGCTCGCCGTCACCAGCCGCTTCGAGCCCTGCGGCCTCATCCAGCTCCAGGGGATGCGATACGGAACGGTACTGCCATCTCTGCCA----------------------------TTCTGAGT-CCT--GAATCCTGATGAA---------------------TGCTTTTC-ATGTA--------ATTGA----TGTCTGG---------------CGATTCTT---GCAGCCCTGCGCCTGCGCGTCCACCGGCGGACTCGTCGACACCATCATCGAAGGCAAGACCGGGTTCCACATGGG-CCGCCTCAGCGTCGACGTAAGGCCAAC----T-GA--TCTGACATACCCT--GCCCCGCC---ATG--T-TTCTTCTACATAC-TGTGTGAATC--TGAATCAGCCAAGCGA-----------TTCTTGTCT-CGTCCTT--CCTTCCT--CCCCAGTGCAACGTCGTGGAGCCGGCCGACGTCAAG-AAGGTGGCGACCACCATAAAACGCGCCATCAAGGTGGTGGGCACGCCGGCGTACGAGGAGATGGTCAAGAACTGCATGATCCAGGATCTCTCCTGGAAGGT---ACGTTACACAAC-----AGT-CCCCGTCACAGCACAGATC-AGCA---------CCAA-----------------GATCG-TC----GATCACACGCGCAC--GTCTC-GCTCGCTCAT--GTTGCTGATTGTGGTGG-------TT------------------------------------------------------------------ Sorghum_grande_5_Hacker830 ----------------------------------------------GTACATCACCGTC-AATACGACGTGTCAACGGTGAGCGCGCG-----------TTTCGCCGGCCGATCTGTTGCTGGCTCGGACCGCC---GGTGG-TTCTGAC-GC-GCAAGCA--TGTTCATT---TT-----------------------------------------------------CAGGCCGTGGAGGCGAAGGCGCTGAACAAGGAGGCGCTGCAGGCGGAGGTCGGGCTCCCGGTGGACCGCAAGGTCCCGCTGGTGGCGTTCATCGGCAGGCTGGAGGAGCAGAAGGGCCCCGACGTCATGGCGGCCGCCATCCCGCTGCTCATGGAGGAGGACGTGCAGATCGTCCTGCTGGTACG---------CCGCCGCCCGGCTACTAC-ATC--CATG--TGGC-TGACCTGAGTAT-CTGACTG-GTGTG-----ACAAACACGATGG-ATGCGATG---------------------------------------------------CATGC-AGGGCACGGGCAAGAAGAAGTTCGAGCGCATGCTGATGAGCGCGGAGGAGAAGTACCCGGACAAGGTGCGCGCCGTGGTGAAGTTCAACGCGGCGCTGGCGCACCACATCATGGCCGGTGCCGACCTGCTCGCCGTCACCAGCCGCTTCGAGCCCTGCGGCCTCATCCAGCTCCAGGGGATGCGATACGGAACGGTACTGCCATCTCTGCCA----------------------------TTCTGAGT-CCT--GAATCCTGATGAA---------------------TGATTTTC-ATGTA--------ATTGA----TGTCTGG---------------CGATTCTT---GCAGCCCTGCGCCTGCGCGTCCACCGGCGGACTCGTCGACACCATCATCGAAGGCAAGACCGGGTTCCACATGGG-CCGCCTCAGCGTCGACGTAAGGCCAGC----------TCTGACATGCACT--GCCCTGCC---ATG--T-TTCTTCTACATAC-TGTGTGAATC--TGAATCAGCCAAGCGA-----------TTCTTGTCT-CGTCCTT--CCTTCCT--CCCCAGTGCAACGTCGTGGAGCCGGCCGACGTCAAG-AAGGTGGCGACCACCATAAAACGCGCCAACAAGGTGGTGGGCACGCCGGCGTACGAGGAGATGGTCAAGAACTGCATGATCCAGGATCTCTCCTGGAAGGT---ACGTTACACAAC-----AGT-CCCCGTCACAGCACA----GAGCA---------CCAA-----------------GATCG-TC----GATCACACGCGCAC--GTCTC-GCTCGCTCAT--GTTGCTGATTGTGGTGG-------T------------------------------------------------------------------- Sorghum_grande_6_Hacker830 ---------------------------------------------AGTACATCACCGTCAAATACGACGTGTCAACGGTGAGCGCGCG-----------TTTCGCCGGCCGATCTGTTGCTGGCTCGGACCGCC---GGTGG-TTCTGAC-GC-GCAAGCA--TGTTCATT---TT-----------------------------------------------------CAGGCCGTGGAGGCGAAGGCGCTGAACAAGGAGGCGCTGCAGGCGGAGGTCGGGCTCCCGGTGGACCGCAAGGTCCCGCTGGTGGCGTTCATCGGCAGGCTGGAGGAGCAGAAGGGCCCGGACGTCATGGCGGCCGCCATCCCGCTGCTCATGGAGGAGGACGTGCAGATCGTCCTGCTGGTACG---------CCGCCGCCCGGCAACTACGA----CATGCAT--CTATATAGTGTTGTT---AC---GTCGCTGAGCT----CAC--TGGTATGAGGAA---------------------------------------------------CACGC-AGGGCACGGGCAAGAAGAAGTTCGAGCGCATGCTGATGAGCGCGGAGGAGAAGTACCCGGACAAGGTGCGCGCCGTGGTGAAGTTCAACGCGGCGCTGGCGCACCACATCATGGCCGGTGCCGACCTGCTCGCCGTCACCAGCCGCTTCGAGCCCTGCGGCCTCATCCAGCTCCAGGGGATGCGATACGGAACGGTACTGCCATCTCTGCCA----------------------------TTCTGAGT-CCT--GAATCCTGATGAA---------------------TGCTTTTC-ATGTA--------ATTGA----TGTCTGG---------------CGATTCTT---GCAGCCCTGCGCCTGCGCGTCCACCGGCGGACTCGTCGACACCATCATCGAAGGCAAGACCGGGTTCCACATGGG-CCGCCTCAGCGTCGACGTAAGGCCAAC----T-GT--TCTGACATACCCT--GCCCCGCC---ATG--T-TTCTTCTACATAC-TGTGTGAATC--TGAATCAGCCAAGCGA-----------TTCTTGTCT-CGTCCTT--CCTTCCT--CCCCAGTGCAACGTCGTGGAGCCGGCCGACGTCAAG-AAGGTGGCGATCACCATAAAACGCGCCATCAAGGTGGTGGGCACGCCGGCGTACGAGGAGATGGTCAAGAACTGCATGATCCAGGATCTCTCCTGGAAGGT---ACGTTACACAAC-----AGT-CCCCGTCACAGCACAGATC-AGCA---------CCAA-----------------GATCG-TC----GATCACACGCGCAC--GTCTC-GCTCGCTCAT--GTTGCTGATTGTGGTGG-------TTTATT-------------------------------------------------------------- Sorghum_grande_7_Hacker830 ---------------------------------------------AGTACATCACCGTCAAATACGACGTGTCAACGGTGAGCGCGCG-----------TTTCGCCGGCCGATCTGTTGCTGGCTCGGACCGCC---GGTGG-TTCTGAC-GC-GCAAGCA--TGTTCATT---TT-----------------------------------------------------CAGGCCGTGGAGGCGAAGGCGCTGAACAAGGAGGCGCTGCAGGCGGAGGTCGGGCTCCCTGTGGACCGCAAGGTCCCGCTGGTGGCGTTCATCGGCAGGCTGGAGGAGCAGAAGGGCCCCGACGTCATGGCGGCCGCCATCCCGCTGCTCATGGAGGAGGACGTGCAGATCGTCCTGCTGGTACG---------CCGCCGCCCGGCTACTAC-ATC--CATG--TGGC-TGACCTGAGTAT-CTGACTG-GTGTG-----ACAAACACGATGG-ATGCGATG---------------------------------------------------CATGC-AGGGCACGGGCAAGAAGAAGTTCGAGCGCATGCTGATGAGCGCGGAGGAGAAGTACCCGGACAAGGTGCGCGCCGTGGTGAAGTTCAACGCGGCGCTGGCGCACCACATCATGGCCGGTGCCGACCTGCTCGCCGTCACCAGCCGCTTCGAGCCCTGCGGCCTCATCCAGCTCCAGGGAATGCGATACGGAACGGTACTGCCATCTCTGCCA----------------------------TTCTGAGT-CCT--GAATCCTGATGAA---------------------TGATTTTC-ATGTA--------ATTGA----TGTCTGG---------------CGATTCTT---GCAGCCCTGCGCCTGCGCGTCCACCGGCGGACTCGTCGACACCATCATCGAAGGCAAGACCGGGTTCCACATGGG-CCGCCTCAGCGTCGACGTAAGGCCAGC----------TCTGACATGCCCT--GCCCCGCC---ATG--T-TTCTTCTACATAC-TGTGTGAATC--TGAATCAGCCAAGCGA-----------TTCTTGTCT-CGTCCTT--CCTTCCT--CCCCAGTGCAACGTCGTGGAACCGGCCGACGTCAAG-A-GGTGGCGACCACCATAAAACGCGCCATCAAGGTGGTGGGCACGCCGGCGTACGAGGAGATGGTCAAGAACTGCATGATCCAGGATCTCTCCTGGAAGGT---ACGTTACACAAC-----AGT-TCCCGTCACAGCACA----GAGCA---------CCAA-----------------GATCG-TC----GATCACACGCGCAC--GTCTC-GCTCGCTCAT--GTTGCTGATTGTGGTGG-------TTT----------------------------------------------------------------- Sorghum_grande_8_Hacker830 ATCGTCACGGCATGGACGTCAGCGAGTGGGATCCCAGCAAGGACAAGTACATCACCGTCAAATACGACGTGTCAACGGTGAGCGCGCG-----------TTTCGCCGGCCGATCTGTTGCTGGCTCGGACCGCC---GGTGG-TTCTGAC-GC-GCAAGCA--TGTTCATT---TT-----------------------------------------------------CAGGCCGTGGAGGCGAAGGCGCTGAACAAGGAGGCGCTGCAGGCGGAGGTCGGGCTCCCGGTGGACCGCAAGGTCCCGCTGGTGGCGTTCATCGGCAGGCTGGAGGAGCAGAAGGGCCCCGACGTCATGGCGGCCGCCATCCCGCTGCTCATGGAGGAGGACGTGCAGATCGTCCTGCTGGTACG---------CCGCCGCCCGGCTACTAC-ATC--CATG--TGGC-TGACCTGAGTAT-CTGACTG-GTGTG-----ACAAACACGATGG-ATGCGATG---------------------------------------------------CATGC-AGGGCACGGGCAAGAAGAAGTTCGAGCGCATGCTGATGAGCGCGGAGGAGAAGTACCCGTACAAGGTGCGCGCCGTGGTGAAGTTCAACGCGGCGCTGGCGCACCACATCATGGCCGGTGCCGACCTGCTCGCCGTCACCAGCCGCTTCGAGCCCTGCGGCCTCATCCAGCTCCAGGGGATGCGATACGGAACGGTACTGCCATCTCTGCCA----------------------------TTCTGAGT-CCT--GAATCCTGATGAA---------------------TGATTTTC-ATGTA--------ATTGA----TGTCTGG---------------CGATTCTT---GCAGCCCTGCGCCTGCGCGTCCACCGGCGGACTCGTCGACACCATCATCGAAGGCAAGACCGGGTTCCACATGGG-CCGCCTCAGCGTCGACGTAAGGCCAGC----------TCTGACATGCCCT--GCCCTGCC---ATG--T-TTCTTCTACATAC-TGTGTGAATC--TGAATCAGCCAAGCGA-----------TTCTTGTCT-CGTCCTT--CCTTCCT--CCCCAGTGCAACGTCGTGGAGCCGGCCGACGTCAAG-AAGGTGGCGACCACCATAAAACGCGCCAACAAGGTGGTGGGCACGCCGGCGTACGAGGAGATGGTCAAGAACTGCATGATCCAGGATCTCTCCTGGAAGGT---ACGTTACACAAC-----AGT-CCCCGTCACAGCACA----GAGCA---------CCAA-----------------GATCG-TC----GATCACACGCGCAC--GTCTC-GCTCGCTCAT--GTTGCTGATTGTGGTGG-------TTT----TTATTTATTTGCTAAA-TAA--------TGCAGGGTCCTGCCAAGAACTGGGAGAACAATC Sorghum_leiocladum_3_Miller35_2 ATCGTCACGGCATGGACGTCAGCGAGTGGGATCCCAGCAAGGACAAGTACATCGCCGTCAAATACGACGTGTCAACGGTGAGC-------------------TTTGCCAA------T-T-TGTTGCT--------------------ACTCTGCTCAT--GTAAATCTTTCA------GGCGCTGG-TTCTGA---GTGCAA-----CAA-----TGTCCAT-T----TCAGGCTGTCGAGGCAAAGGCACTGAACAAGGAGGCGCTGCAGGCCGAGGTCGGGCTCCCGGTGGACCGGAAGATCCCGCTGGTGGCGTTCATCGGCAGGCTGGAGGAGCAGAAGGGCCCCGACGTCATGGCGGCCGCCATCCCGCTGCTCATGGAGGAGGACATACAGATCGTTCTGCTGGTACG-----------------------CTGGCTGCTACATGCATAGCTAGTGTTACGGGCATCAT-ACCTGAC--TGATCGA--TG-C---------GAATG----------------------------------CGGTG-----------CATGC-AGGGCACTGGCAAGAAGAAGTTCGAGCGCATGCTGATGAGCGCCGAGGAGAAGTACCCCGACAAGGTGCGCGCCGTGGTCAAGTTCAACGCGGCGCTGGCACACCACATCATGGCCGGCGCCGACCTGCTGGCCGTCACCAGCCGCTTCGAGCCCTGCGGCCTCATCCAGCTCCAGGGGATGCGATACGGAACGGTACGATACGATACGATAC----------GAGCACTGCAGCAAAA--------TCCCTC----------TGAA---------------------TGATT-CCGATGTG--------ATTGATGGATGTGTGG---------------CGATTCTT---GCAGCCCTGCGCCTGCGCGTCCACCGGCGGACTCGTCGACACCATCATCGAAGGCAAGACAGGATTCCACATGGG-CCGCCTCAGCGTCGACGTAAG-C--------TGGACCTCTTGCATACCCT--GCCCTGCC---ATGGATGTTTTTCTACATG----TATAGATC--TGAATCAGCAAAGCAA-----------TTCTTGTTT-CGTCCTC--TCTTCCTCTCCCCAGTGCAACGTCGTGGAGCCGGCCGATGTGAAG-AAGGTGGCGACCACCTTGAAGCGTGCCATCAAGGTGGTCGGCACGCCGGCGTACGAGGAGATGGTCAAGAACTGCATGATCCAGGATCTGTCCTGGAAGGTACGACGT-ACA----GCA------CGCCGTCAGAGCA------GAGCAGAACAC-------TT-------------------------------------------GTCTC-GCTC-CT-----ATTGCTGATTGTGGTGGTGG----TTT----------ATTTGC-AAAATAAT-------T-CAGGGCCCTGCCAAGAACTGGGAGAACAAGG Sorghum_leiocladum_2_Miller35 ATCGTCACGGCATGGACGTTAGCGAGTGGGATCCCAGCAAGGACAAGTACATCGCCGTCAAATACGACGTGTCAACGGTGAGC-------------------TTTGCCAA------T-T-TGTTGCT--------------------ACTCTGCTCAT--GTAAATCTTTCA------GGCGCTGG-TTCTGA---GTGCAA-----CAA-----TGTCCAT-T----TCAGGCTGTCGAGGCAAAGGCACTGAACAAGGAGGCGCTGCAGGCCGAGGTCGGGCTCCCGGTGGACCGGAAGATCCCGCTGGTGGCGTTCATCGGCAGGCTGGAGGAGCAGAAGGGCCCCGACGTCATGGCGGCCGCCATCCCGCTGCTCATGGAGGAGGACATACAGATCGTTCTGCTGGTACG-----------------------CTGGCTGCTACATGTATAGCTAGTGTTACGGGCATCAT-ACCTGAC--TGATCGA--TG-C---------GAATG----------------------------------CGATG-----------CATGT-TGGGCACTGGCAAGAAGAAGTTCGAGCGCATGCTGATGAGCGCCGAGGAGAAGTACCC-GACAAGGTGCGCGCCGTGGTCAAGTTTAACGCGGCGCTGGCACACCACATCATGGCCGGCGCCGACCTGCTGGCCGTCACCAGCCGCTTCGAGCCCTGCGGCCTCATCCAGCTCCAGGGGATGCGATACGGAACGGTACGATACGATAC---------------GAGCACTGCAGCAAAA--------TCCCTC----------TGAA---------------------TGATT-CCGATGTG--------ATTGATGGATGTGTGG---------------CGATTCTT---GCAGCCCTGCGCCTGCGCGTCCACCGGCGGACTCGTCGACACCATCGTCGAAGGCAAGACAGGATTCCACATGGG-CCGCCTCAGCGTCGACGTAAG-C--------TGGACCTCTTGCATACCCT--GCCCTGCC---ATGGATGTTTTTCTACATG----TATAGATC--TGAATCAGCAAAGCAA-----------TTCTTGTTT-CGTCCTC--TCTTCCTCTCCCCAGTGCAACGTCGTGGAGCCGGCCGATGTGAAG-AAGGTGGCGACCACCTTGAAGCGTGCCATCAAGGTGGTCGGCACGCCGGCGCACGAGGAGATGGTCAAGAACTGCATGATCCAGGATCTGTCCTGGAAGGTACGACGT-ACA----GCA------CGCCGTCAGAGCA------GAGCAGAACAC-------TT-------------------------------------------GTCTC-GCTC-CT-----ATTGCTGATTGTGGTGGTGG----TTT----------ATTTGC-AAAATAAT-------T-CAGGGCCCTGCCAAGAACTGGGAGAACAAGG Sorghum_leiocladum_1_Miller35 ATCGTCACGGCATGGACGTTAGCGAGTGGGATCCCAGCAAGGACAAGTACATCGCCGTCAAATACGACGTGTCAACGGTGAGC-------------------TTTGCCAA------C-T-TGTTGCT--------------------ACTCTGCTCAT--GTAAATCTTTCA------GGCGCTGG-TTCTGA---GTGCAA-----CAA-----TGTCCAT-T----TCAGGCTGTCGAGGCAAAGGCACTGAACAAGGAGGCGCTGCAGGCCGAGGTCGGGCTCCCGGTGGACCGGAAGATCCCGCTGGTGGCGTTCATCGGCAGGCTGGAGGAGCAGAAGGACCCCGACGTCATGGCGGCCGCCATCCCGCTGCTCATGGAGGAGGACATACAGATCGTTCTGCTGGTACG-----------------------CTGGCTGCTACATGCATAGCTAGTGTTACGGGCATCAT-ACCTGAC--TGATCGG--TG-C---------GAATG----------------------------------CGATG-----------CATGC-AGGTCACTGGCAAGAAAAAGTTCGAGCGCATGCTGATGAGCGCCGAGGAGAAGTACCCCGACAAGGTGCGCGCCGTGGTCAAGTTCAACGCGGCGCTGGCACACCACATCATGGCCGGCGCCGACCTGCTGGCCGTCACCAGCCGCTTCGAGCCCTGCGGCCTCATCCAGCTCCAGGGGATGCGATACGGAACGGTACGATACGATAC---------------GAGCACTGCAGCAAAA--------TCCCTC----------TGAA---------------------TGATT-CCGATGTG--------ATTGATGGATGTGTAG---------------CGATTCTC---GCAGCCCTGCGCCTGCGCGTCCACCGGCGGACTCGTCGACACCATCATCGAAGGCAAGACAGGATTCCACATGGG-CCGCCTCAGCGTCGACGTAAG-C--------TGGACCTCTTGCATACCCT--GCCCTGCC---ATGGATGTTTTTCTACATG----TATAGATC--TGAATCAGCAAAGCAA-----------TTCTTGTTT-CGTCCTC--TCTTCCTCTCCCCAGTGCAACGTCGTGGAGCCGGCCGATGTGAAG-AAGGTGGCGACCACCTTGAAGCGTGCCATCAAGGTGGTCGGCACGCCGGCGTACGAGGAGATGGTCAAGGACTGCATGATCCAGGATCTGTCCTGGAAGGTACGACGT-ACA----GCA------CGCCGTCAGAGCA------GAGCAGAACAC-------TT-------------------------------------------GTCTC-GCTC-CT-----ATTGCTGATTGTGGTGGTGG----TTT----------ATTTGC-AAAATAAT-------T-CAGGGCCCTGCCAAGAACTGGGAGAACAAGG Sorghum_nitidum_1_Clemens_sn_4 ATCGTCACGGCATGGACGTCAGCGAGTGGGATCCCAGCAAGGACAAGTACATCACCGTCAAATACGACGTGTCAACGGTGAGCGCGCGCGTGCG-----TTTCGCCGGCCGATCTGTTGCTGGCTCGGACCGCCGGCGGTGG-TTCTGAC-GCGGCAAG----TGTGCATTTCATT-----------------------------------------------------CAGGTCGTGGAGGCGAAGGCGCTGAACAAGGAGGCGCTGCAGGCGGAGGTCGGGCTCCCGGTGGACCGGAAGGTCCCGCTGGTGGCGTTCATCGGCAGGCTGGAGGAGCAGAAGGGCCCCGACGTCATGGCGGCCGCCATCCCGCTGCTCATGGAGGAGGACGTGCAGATCGTCCTGCTGGTACG---------CCGCCGCCCGGCAACCACGA----CACGCAT--CTATA--GTGTTGTTT--AA---GTCGCTGAGCT----CAC--TGGTGTGAGGAA---------------------------------------------------CACGC-AGGGCACGGGCAAGAAGAAGTTCGAGCGCATGCTGATGAGCGCCGAGGAGAAGTACCCGGACAAGGTGCGCGCCGTGGTGAAGTTCAACGCGGCGCTGGCGCACCACATCATGGCCGGCGCCGACCTGCTCGCCGTCACCAGCCGCTTCGAGCCCTGCGGCCTCATCCAGCTGCAAGGGATGCGATACAGAACGGTACTACCATCTCTGCCA----------------------------TTCTGAGT-CCT--GAATCCTGATGAA---------------------TGCTTTTC-ATGTAACTCAC----TGA----TGTCTGG---------------CGATTCTT---GCAGCCCTGCGCCTGCGCGTCCACCGGCGGACTCGTCGACACCATCATCGAAGGCAAGACCGGGTTCCACATGGG-CCGCCTCAGCGTCGACGTAAGGCCAGC----------TCTTACATACCCT--GCCCTGCC---ATG--T-TTCTTCTACATAC-TGTATGAATC--TGAATCAGCAATGCGA-----------TTCTTGTCT-CGTCCTT--TCTTCCT--CCCCAGTGCAACGTCGTGGAGCCGGCCGACGTCAAG-AAGGTGGCGACCACCATAAAACGCGCCATCAAGGTGGTGGGCACGCCGGTGTACGAGGAGATGGTCAAGAACTGCATGATCCAGGATCTCTCCTGGAAGGT---ACGTT-----AC-----AGTACGCCGTCAGAGCACAGATCGAGCA---------CCAA-----------------GATCG-TC----GATCACACGCGCGC--GTCTC-GCTCGCTCAT--GTTGCTGATTTTGGTGG-------TTTAATTATATTTATTTGC-AAAATAA--------TGCAGGGCCCTGCCAAGAACTGGGAGAACAAGG Sorghum_brachypodum_2_Cowie8981 ATCGTCACGGCATGGACGTCAGCGAGTGGGATCCCAGCAAGGACAAGTACATCACCGTCAAATACGACGTGTCAACGGTGAGCGCGCG-----------TTTCGCCGGCCGATCTGTTGCTGGCTCGGACCGCC---GGTGG-TTCTGAC-GC-GCAAG-----CATGTTCATTTT-----------------------------------------------------CAGGCCGTGGAGGCGAAGGCGCTGAACAAGGAGGCGCTGTAGGCGGAGGTCGGGCTCCCGGTGGACCGCAAGGTCCCGCTGGTGGCGTTCATCGGCAGGCTGGAGGAGCAGAAGGGCCCCGACGTCATGGCGGCCGCCATCCCGCTGCTCATGGAGGAGGACGCGCAGATCGTCCTGCTGGTACG---------CCGCCGCCCGGCTACTACATC---CATGTGG--CTGACCTGAGTATCT--GAC---TGGTGTGACAAACACGA---TGG-ATGCGATG---------------------------------------------------CATGC-AGGGCACGGGCAAGAAGAAGTTCGAGCGCATGCTGATGAGCGCGGAGGAGAAGTACCCGGACAAGGTGCGCGCCGTGGTGAAGTTCAACGCGGCGCTGGCGCACCACATCATGGCCGGTGCCGACCTGCTCGCCGTCACCAGCCGCTTCGAGCCCTGCGGCCTCATCCAGCTCCAGGGGATGCGATACGGAACGGTACTGCCATCTCTGCCA----------------------------TTCTGAGT-CCT--GAATCCTGATGAA---------------------TGATTTTC-ATGTA--------ATTGA----TGTCTGG---------------CGATTCTT---GCAGCCCTGCGCCTGCGCGTCCACCGGCGGACTCGTCGACACCATCATCGAAGGCAAGACCGGGTTCCACATGGG-CCGCCTCAGCGTCGACGTAAGGCCAGC----------TCTGACATGCCCT--GCCCTGC----CAT---G-TTT-CTTC-TACATACTGTG-----TGAATCTGAATCAGCCA-----AGCGATTCTTG-TCTCGTCCT----TCCTTCCTCCCCAGTGCAACGTCGTGGAGCCGGCCGACGTCAAG-AAGGTGGCGACCACCATAAAACGCGCCAACAAGGTGGTGGGCACGCCGGCGTACGAGGAGATGGTCAAGAACTGCATGATCCAGGATCTCTCCTGGAAGGT---ACGTTACACAAC-----AGT-CCCCGTCACAGCACA----GAGCA---------CCAA-----------------GATCG-TCG----ATCACACGCGCACGT--CTC-GCTCGCTCAT--GTTGCTGATTGTGGTGGTTTTTA-TTTA----------TTTGCTAAA-TAA--------TGCAGGGTCCTGCCAAGAACTGGGAGAACAATC Sorghum_brachypodum_1_Specht1260 ATCGTCACGGCATGGACGTCAGCGAGTGGGATCCCAGCAAGGACAAGTACATCACCGTCAAATACGACGTGTCAACGGTGAGCGCGCG-----------TTTCACGGGCCTATGTGTTTCTGGCTCCCATT-CC---GCTGG-TTCTGAC-CCGTTAAT-----AGGG-TGATTTT------------------------------------------------------GTGCCTTGATTGCAACCGGCCTGAGCATTCACGCTTTGCAGGCTGAATTCGGGCTCCCGGTGGACCGCAAGGTCCCGCTGGCGGCGTTCATCGGCAGGCTGGAGGATCACAACGGCCCCGACTTCATGGCGGCCGCCATCCCGCTGCTCATGGAGGAGGACGTGCAGATCGTCCTGCTGGTACG---------CCGCCGGCCGCCAACTACG----ACATGCAT--CTATATATTGTTT-T---AC-----GTCACCCTTTCAC-----TGGTATGATGAA---------------------------------------------------TTCGC-ACGGCACGGGCAAGAATAAGTTCGAGCGCATGCTGATGAGAGCGGAGGAGAAGTACCCGGACAAGGTGCGCGCCGTGGTGAAATTCAACGCGGCGCTGGCGCACCACATCATGGCCGGAGCCGACCTGCTCGCCGTCACCAGCCGTTTCGAGCCCTGCGGCCTCATCCAGCTCCAGGGGATGCGATACGGAACGGTAGTGCCATCTCTGC-------CATTCTGAGTCCTGAATCCTGA-------------------------GAA---------------------TGCTTTTCATGCA---------ATTGA----TGTCTG----------------GCGATTCTT--GCAGCCTTGGGCCTGCGCGTCCACCGGCGGACTCGTCGACACCATCATCGAAGGCAAGACCTTAATCCACATGGG-CCGCCTCAGAGTTGAAGTAAGGCCAGG----------TGAGACAGACCTT--GCCCCGCC---ATG-ATG-TCTTT-----ACATAACCAG-----GCAATCTGAATCAGACA-----AGAGATTTAGG-TCTGGTCCT----TCCTTCCTCCCCAGTGCAAGGTCA-AGAGCCGTCCGACGTCAAG-AAGCGGGATACCACCATAAAACGCGCCATCAAGGTGGTT-GCACGCCGGCGTACGAGGAGAGGGTCAAGAAGTGCATGATCCAGGATC-ATCTCGGATAAT---ACGCATCAGAAC-----AGT-CCCCGTCGAAGCA------GGAGC-AACAA-----AAT----------------GATGGAGA--------ACAAGCGCACGA--CTA-GCTAGCTCTCCATCCGA-TAGTA----------GTGGAACAA---------CATATGGCTTAATAA---------GACACATCCAGGCAAGAAA-GAAAGAGCA Sorghum_amplum_1_Fryxell_Craven4011 ----------CATGGACGTCAGCGAGTGGGATCCCAGCAAGGACAAGTACATCACCGTCAAATACGACGTGTCAACGGTGAGCGCGCG--------AGAATTCGCCCT-TGTTCTCCCAGTTCTTGGCAGGGTAATTTG-ACCTA---GAGG--------GGTTGAACTTT-GACCAGGGAGCACGCCCTAGAATTGCGCGCTGTAAAACCAAGTACGTCCA---------TGCCGTTGAGGCGAATTCGTTTAATAATCACGCGTTGCAGGCGGAATTCGGGCTCCCGGTGGACCGCACGGTCCCGCTGGTGGCGTTCATCGGCAGGCTGGAGGAGCACAACGGCCCCGACGTCATGGCGGCCGCCATCCCGCTGCTCATGGAGGAGGACGTGCACATCGTCCTGCTGGTACG---------CCGCCGCCCGGCAACTACG----ACATGCAT--CTATATAGTGTTGTT---AC--GTCGCTGATCT--CAC-----TGGTATGAGGAA---------------------------------------------------CACGC-AGGGCACGGGCAAGAATAAGTTCGAGCGCATGCTGATGAGCGCGGAAGAAAACTACCCGGACAAGGTGCGCGCCGTGGTGAAGTTCAACGCGGCGCTGGCGCACCACATCATGGCCGGTGCCGACCTGCTCGCCGTCACCATTCGCTTCGAGCCCTGCGGCCTCATCCAGCTCCAGGGGATGCGATACGGAACGGTACTGCCATCTCTGC-------C-TTCTGAGTCCTGTACCCTGA------------------------TGAA---------------------TGCCTTTCATGTA---------ATTGA----TGTCTG----------------GGGATTCTT--GCACCTCTGCGCCTGCGCGTCTACCGGCGGACTCTTCT-CACCATCATCGAAAGGCAGACCGGGTTTCACATGGGGCCTCCTCA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Sorghum_propinquum_1_Liu233 --------------------------------------------AAGTACATCGCCGTCAA-TACGACGTGTCAACGGTGAGC----------------TTTGCCAA------T-T-TGTTGCT--------------------ACTCTGCTCAT--GTAAATCTTTCA------GGCGCTGG-TTCTGA---GTGCAA-----CAA-----TGTCCAT-T-------TCAGGCTGTCGAGGCAAAGGCACTGAACAAGGAGGCGCTGCAGGCCGAGGTCGGGCTCCCGGTGGACCGGAAGATCCCGCTGGTGGCGTTCATCGGCAGGCTGGAGGAGCAGAAGGGCCCCGACGTCATGGCGGCCGCCATCCCGCTGCTCATGGAGGAGGACATACAGATCGTTCTGCTGGTACG-----------------------CTGGCTGCTACATGCATAGCTAGTGTTACGGGCATCAT-ACCTGAC--TGATCGA--TG-C---------GAATG----------------------------------CGATG-----------CATGC-AGGGCACTGGCAAGAAGAAGTTCGAGCGCATGCTGATGAGCGCCGAGGAGAAGTACCCCGACAAGGTGCGCGCCGTGGTCAAGTTCAACGCGGCGCTGGCACACCACATCATGGCCGGCGCCGACCTGCTGGCCGTCACCAGCCGCTTCGAGCCCTGCGGCCTCATCCAGCTCCAGGGGATGCGATACGGAACGGTACGATACGATACGATAC----------GAGCACTGCAGCAAAA--------TCCCTC----------TGAA---------------------TGATT-CCGATGTG--------ATTGATGGATGTGTGG---------------CGATTCTT---GCAGCCCTGCGCCTGCGCGTCCACCGGCGGACTCGTCGACACCATCATCGAAGGCAAGACAGGATTCCACATGGG-CCGCCTCAGCGTCGACGTAAG-C--------TGGACCTCTTGCATACCCT--GCCCTGCC---ATGGATGTTTTTCTACATG----TATAGATC--TGAATCAGCAAAGCAA-----------TTCTTGTTT-CGTCCTC--TCTTCCTCTCCCCAGTGCAACGTCGTGGAGCCGGCCGATGTGAAG-AAGGTGGCGACCACCTTGAAGCGTGCCATCAAGGTGGTCGGCACGCCGGCGTACGAGGAGATGGTCAAGAACTGCATGATCCAGGATCTGTCCTGGAAGGTACGACGT-ACA----GCA------CGCCGTCAGAGCA------GAGCAGAACAC-------TT-------------------------------------------GTCTC-GCTC-CT-----ATTGCTGATTGTGGTGGTG------------------------------------------------------------------------- Sorghum_drummondii_1_Liu238 --------------------------------------------AAGTACATCGCCGTCAAATACGACGTGTCAACGGTGAGC----------------TTTGCCAA------T-T-TGTTGCT--------------------ACTCTGCTCAT--GTAAATCTTTCA------GGCGCTGG-TTCTGA---GTGCAA-----CAA-----TGTCCAT-T-------TCAGGCTGTCGAGGCAAAGGCACTGAACAAGGAGGCGCTGCAGGCCGAGGTCGGGCTCCCGGTGGACCGGAAGATCCCGCTGGTGGCGTTCATCGGCAGGCTGGAGGAGCAGAAGGGCCCCGACGTCATGGCGGCCGCCATCCCGCTGCTCATGGAGGAGGACATACAGATCGTTCTGCTGGTACG-----------------------CTGGCTGCTACATGCATAGCTAGTGTTACGGGCATCAT-ACCTGAC--TGATCGA--TG-C---------GAATG----------------------------------CGATG-----------CATGC-AGGGCACTGGCAAGAAGAAGTTCGAGCGCATGCTGATGAGCGCCGAGGAGAAGTACCCCGACAAGGTGCGCGCCGTGGTCAAGTTCAACGCGGCGCTGGCACACCACATCATGGCCGGCGCCGACCTGCTGGCCGTCACCAGCCGCTTCGAGCCCTGCGGCCTCATCCAGCTCCAGGGGATGCGATACGGAACGGTACGATACGATACGATAC----------GAGCACTGCAGCAAAA--------TCCCTC----------TGAA---------------------TGATT-CCGATGTG--------ATTGATGGATGTGTGG---------------CGATTCTT---GCAGCCCTGCGCCTGCGCGTCCACCGGCGGACTCGTCGACACCATCATCGAAGGCAAGACAGGATTCCACATGGG-CCGCCTCAGCGTCGACGTAAG-C--------TGGACCTCTTGCATACCCT--GCCCTGCC---ATGGATGTTTTTCTACATG----TATAGATC--TGAATCAGCAAAGCAA-----------TTCTTGTTT-CGTCCTC--TCTTCCTCTCCCCAGTGCAACGTCGTGGAGCCGGCCGATGTGAAG-AAGGTGGCGACCACCTTGAAGCGTGCCATCAAGGTGGTCGGCACGCCGGCGTACGAGGAGATGGTCAAGAACTGCATGATCCAGGATCTGTCCTGGAAGGTACGACGT-ACA----GCA------CGCCGTCAGAGCA------GAGCAGAACAC-------TT-------------------------------------------GTCTC-GCTC-CT-----ATTGCTGATTGT-------------------------------------------------------------------------------- Sorghum_drummondii_2_Liu239 ---------------------------------------AGGACAAGTACATCGCCGTCAA-TACGACGTGTCAACGGTGAGC----------------TTTGCCAA------T-T-TGTTGCT--------------------ACTCTGCTCAT--GTAAATCTTTCA------GGCGCTGG-TTCTGA---GTGCAA-----CAA-----TGTCCAT-T-------TCAGGCTGTCGAGGCAAAGGCACTGAACAAGGAGGCGCTGCAGGCCGAGGTCGGGCTCCCGGTGGACCGGAAGATCCCGCTGGTGGCGTTCATCGGCAGGCTGGAGGAGCAGAAGGGCCCCGACGTCATGGCGGCCGCCATCCCGCTGCTCATGGAGGAGGACATACAGATCGTTCTGCTGGTACG-----------------------CTGGCTGCTACATGCATAGCTAGTGTTACGGGCATCAT-ACCTGAC--TGATCGA--TG-C---------GAATG----------------------------------CGATG-----------CATGC-AGGGCACTGGCAAGAAGAAGTTCGAGCGCATGCTGATGAGCGCCGAGGAGAAGTACCCCGACAAGGTGCGCGCCGTGGTCAAGTTCAACGCGGCGCTGGCACACCACATCATGGCCGGCGCCGACCTGCTGGCCGTCACCAGCCGCTTCGAGCCCTGCGGCCTCATCCAGCTCCAGGGGATGCGATACGGAACGGTACGATACGATAC---------------GAGCACTGCAGCAAAA--------TCCCTC----------TGAA---------------------TGATT-CCGATGTG--------ATTGATGGATGTGTGG---------------CGATTCTT---GCAGCCCTGCGCCTGCGCGTCCACCGGCGGACTCGTCGACACCATCATCGAAGGCAAGACAGGATTCCACATGGG-CCGCCTCAGCGTCGACGTAAG-C--------TGGACCTCTTGCATACCCT--GCCCTGCC---ATGGATGTTTTTCTACATG----TATAGATC--TGAATCAGCAAAGCAA-----------TTCTTGTTT-CGTCCTC--TCTTCCTCTCCCCAGTGCAACGTCGTGGAGCCGGCCGATGTGAAG-AAGGTGGCGACCACCTTGAAGCGTGCCATCAAGGTGGTCGGCACGCCGGCGTACGAGGAGATGGTCAAGAACTGCATGATCCAGGATCTGTCCTGGAAGGTACGACGT-ACA----GCA------CGCCGTCAGAGCA------GAGCAGAACAC-------TT-------------------------------------------GTCTC-GCTC-CT-----ATTGCTGATTGTGGTGGTG-----TTT----------ATT---------------------------------------------------- Sorghum_bicolor_3_Liu231 ----------------------------------------------GTACATCGCCGTCAAATACGACGTGTCAACGGTGAGC----------------TTTGCCAA------T-T-TGTTGCT--------------------ACTCTGCTCAT--GTAAATCTTTCA------GGCGCTGG-TTCTGA---GTGCAA-----CAA-----TGTCCAT-T-------TCAGGCTGTCGAGGCAAAGGCACTGAACAAGGAGGCGCTGCAGGCCGAGGTCGGGCTCCCGGTGGACCGGAAGATCCCGCTGGTGGCGTTCATCGGCAGGCTGGAGGAGCAGAAGGGCCCCGACGTCATGGCGGCCGCCATCCCGCTGCTCATGGAGGAGGACATACAGATCGTTCTGCTGGTACG-----------------------CTGGCTGCTACATGCATAGCTAGTGTTACGGGCATCAT-ACCTGAC--TGATCGA--TG-C---------GAATG----------------------------------CGATG-----------CATGC-AGGGCACTGGCAAGAAGAAGTTCGAGCGCATGCTGATGAGCGCCGAGGAGAAGTACCCCGACAAGGTGCGCGCCGTGGTCAAGTTCAACGCGGCGCTGGCACACCACATCATGGCCGGCGCCGACCTGCTGGCCGTCACCAGCCGCTTCGAGCCCTGCGGCCTCATCCAGCTCCAGGGGATGCGATACGGAACGGTACGATACGATACGATACGATACGATACGAGCACTGCAGCAAAA--------TCCCTC----------TGAA---------------------TGATT-CCGATGTG--------ATTGATGGATGTGTGG---------------CGATTCTT---GCAGCCCTGCGCCTGCGCGTCCACCGGCGGACTCGTCGACACCATCATCGAAGGCAAGACAGGATTCCACATGGG-CCGCCTCAGCGTCGACGTAAG-C--------TGGACCTCTTGCATACCCT--GCCCTGCC---ATGGATGTTTTTCTACATG----TATAGATC--TGAATCAGCAAAGCAA-----------TTCTTGTTT-CGTCCTC--TCTTCCTCTCCCCAGTGCAACGTCGTGGAGCCGGCCGATGTGAAG-AAGGTGGCGACCACCTTGAAGCGTGCCATCAAGGTGGTCGGCACGCCGGCGTACGAGGAGATGGTCAAGAACTGCATGATCCAGGATCTGTCCTGGAAGGTACGACGT-ACA----GCA------CGCCGTCAGAGCA------GAGCAGAACAC-------TT-------------------------------------------GTCTC-GCTC-CT-----ATTGCTGATTGTGGTGGTG------------------------------------------------------------------------- Sorghum_bicolor_1_Liu229 ----------------------------------------------GTACATCGCCGTCAAATACGACGTGTCAACGGTGAGC----------------TTTGCCAA------T-T-TGTTGCT--------------------ACTCTGCTCAT--GTAAATCTTTCA------GGCGCTGG-TTCTGA---GTGCAA-----CAA-----TGTCCAT-T-------TCAGGCTGTCGAGGCAAAGGCACTGAACAAGGAGGCGCTGCAGGCCGAGGTCGGGCTCCCGGTGGACCGGAAGATCCCGCTGGTGGCGTTCATCGGCAGGCTGGAGGAGCAGAAGGGCCCCGACGTCATGGCGGCCGCCATCCCGCTGCTCATGGAGGAGGACATACAGATCGTTCTGCTGGTACG-----------------------CTGGCTGCTACATGCATAGCTAGTGTTACGGGCATCAT-ACCTGAC--TGATCGA--TG-C---------GAATG----------------------------------CGATG-----------CATGC-AGGGCACTGGCAAGAAGAAGTTCGAGCGCATGCTGATGAGCGCCGAGGAGAAGTACCCCGACAAGGTGCGCGCCGTGGTCAAGTTCAACGCGGCGCTGGCACACCACATCATGGCCGGCGCCGACCTGCTGGCCGTCACCAGCCGCTTCGAGCCCTGCGGCCTCATCCAGCTCCAGGGGATGCGATACGGAACGGTACGATACGATACGATACGATACGATACGAGCACTGCAGCGGAA--------TCCCTC----------TGAA---------------------TGATT-CCGATGTG--------ATTGATGGATGTGTGG---------------CGATTCTT---GCAGCCCTGCGCCTGCGCGTCCACCGGCGGACTCGTCGACACCATCATCGAAGGCAAGACAGGATTCCACATGGG-CCGCCTCAGCGTCGACGTAAG-C--------TGGACCTCTTGCATACCCT--GCCCTGCC---ATGGATGTTTTTCTACATG----TATAGATC--TGAATCAGCAAAGCAA-----------TTCTTGTTT-CGTCCTC--TCTTCCTCTCCCCAGTGCAACGTCGTGGAGCCGGCCGATGTGAAG-AAGGTGGCGACCACCTTGAAGCGTGCCATCAAGGTGGTCGGCACGCCGGCGTACGAGGAGATGGTCAAGAACTGCATGATCCAGGATCTGTCCTGGAAGGTACGACGT-ACA----GCA------CGCCGTCAGAGCA------GAGCAGAACAC-------TT-------------------------------------------GTCTC-GCTC-CT-----ATTGCTGATTGTGGTGGTG------------------------------------------------------------------------- Sorghum_bicolor_2_Liu230 -------------------------------TCCCAGCAAGGACAAGTACATCGCCGTCAAATACGACGTGTCAACGGTGAGC----------------TTTGCCAA------T-T-TGTTGCT--------------------ACTCTGCTCAT--GTAAATCTTTCA------GGCGCTGG-TTCTGA---GTGCAA-----CAA-----TGTCCAT-T-------TCAGGCTGTCGAGGCAAAGGCACTGAACAAGGAGGCGCTGCAGGCCGAGGTCGGGCTCCCGGTGGACCGGAAGATCCCGCTGGTGGCGTTCATCGGCAGGCTGGAGGAGCAGAAGGGCCCCGACGTCATGGCGGCCGCCATCCCGCTGCTCATGGAGGAGGACATACAGATCGTTCTGCTGGTACG-----------------------CTGGCTGCTACATGCATAGCTAGTGTTACGGGCATCAT-ACCTGAC--TGATCGA--TG-C---------GAATG----------------------------------CGATG-----------CATGC-AGGGCACTGGCAAGAAGAAGTTCGAGCGCATGCTGATGAGCGCCGAGGAGAAGTACCCCGACAAGGTGCGCGCCGTGGTCAAGTTCAACGCGGCGCTGGCACACCACATCATGGCCGGCGCCGACCTGCTGGCCGTCACCAGCCGCTTCGAGCCCTGCGGCCTCATCCAGCTCCAGGGGATGCGATACGGAACGGTACGATACGATACGATAC----------GAGCACTGCAGCAAAA--------TCCCTC----------TGAA---------------------TGATT-CCGATGTG--------ATTGATGGATGTGTGG---------------CGATTCTT---GCAGCCCTGCGCCTGCGCGTCCACCGGCGGACTCGTCGACACCATCATCGAAGGCAAGACAGGATTCCACATGGG-CCGCCTCAGCGTCGACGTAAG-C--------TGGACCTCTTGCATACCCT--GCCCTGCC---ATGGATGTTTTTCTACATG----TATAGATC--TGAATCAGCAAAGCAA-----------TTCTTGTTT-CGTCCTC--TCTTCCTCTCCCCAGTGCAACGTCGTGGAGCCGGCCGATGTGAAG-AAGGTGGCGACCACCTTGAAGCGTGCCATCAAGGTGGTCGGCACGCCGGCGTACGAGGAGATGGTCAAGAACTGCATGATCCAGGATCTGTCCTGGAAGGTACGACGT-ACA----GCA------CGCCGTCAGAGCA------GAGCAGAACAC-------TT-------------------------------------------GTCTC-GCTC-CT-----ATTGCTGATTGTGGTGGTG-----TTT-----------TT--C-AAAATTA----------CCCGG-------------------------- Sorghum_versicolor_2_Godfrey1666_2 ATCGTCACGGCATGGACGTTAGCGAGTGGGATCCCAGCAAGGACAAGTACATCGCCGTCAAATACGACGTATCAACGGTGAGC----------------TTTGCCAA------T-T-TGTTGCT--------------------ACTCTGCTCAT--GTAAATCTTTCA------GGCGCTGG-TTCTGA---GTGCAA-----CAA-----TGTCCAT-T-------TCAGGCTGTCGAGGCAAAGGCACTGAACAAGGAGGCGCTGCAGGCCGAGGTCGGGCTCCCGGTGGACCGGAAGATCCCACTGGTGGCGTTCATCGGCAGGCTGGAGGAGCAGAAGGGCCCCGACGTCATGGCGGCCGCCATCCCGCTGCTCATGGAGGAGGACATACAGATCGTTCTGCTGGTACG-----------------------CTGGCTGCTACATGCATAGCTAGTGTTACGGGCATCAT-ACCTGAC--TGATCGA--TG-C---------GAATG----------------------------------CGATG-----------CATGC-AGGGCACTGGCAAGAAGAAGTTCGAGCGCATGCTGATGAGCGCCGAGGAGAAGTACCCCGACAAGGTGCGCGCCGTGGTCAAGTTCAACGCGGCGCTGGCACACCACATCATGGCCGGCGCCGACCTGCTGGCCGTCACCAGCCGCTTCGAGCCCTGCGGCCTCATCCAGCTCCAGGGGATGCGATACGGAACGGTACGATACGATAC---------------GAGCACGGCAGCAAAA--------TCCCTC----------TGAA---------------------TGATT-CCGATGTG--------GTTGATGGATGTGTGG---------------CGATTCTT---GCAGCCCTGCGCCTGCGCGTCCACCGGCGGACTCGTCGACACCATCATCGAAGGCAAGACAGGATTCCACATGGG-CCGCCTCAGCGTCGACGTAAG-C--------TGGACCTCTTGCATACCCT--GCCCTGCC---ATGGATGTTTTTCTACATG----TATAGATC--TGAATCAGCAAAGCAA-----------TTCTTGTTT-CGTCCTC--TCTTCCTCTCCCCAGTGCAACGTCGTGGAGCCGGCCGATGTGAAG-AAGGTGGCGACCACCTTGAAGCGTGCCATCAAGGTGGTCGGCACGCCGGCGTACGAGGAGATGGTTAAGAACTGCATGATCCAGGATCTGTCCTGGAAGGTACGACGT-ACA----GCA------CGCCGTCAGAGCA------GAGCAGAACAC-------TT-------------------------------------------GTCTC-GCTC-CT-----ATTGCTGATTGTGGTGGTGG----TTT----------ATTTGC-AAAATAAT-------T-CAGGGCCCTGCCAAGAACTGGGAGAACAAGG Sorghum_versicolor_1_Godfrey1666 ATCGTCACGGCATGGACGTTAGCGAGTGGGATCCCAGCAAGGACAAGTACATCGCCGTCAAATACGACGTGTCAACGGTGAGC----GATC----GACCTTTGCCAA------T-T-TGTTGCT--------------------AGTCTGCTCAT--GTAAATCTTTCA------GGCGCTGG-TTCTGA---GTGCAA-----CAA-----TGTCCAT-T-------TCAGGCTGTCGAGGCAAAGGCACTGAACAAGGAGGCGCTGCAGGCCGAGGTCGGGCTCCCGGTGGACCGGAAGATCCCGCTGGTGGCGTTCATCGGCAGGCTGGAGGAGCAGAAGGGCCCCGACGTCATGGCGGCCGCCATCCCGCTGCTCATGGAGGAGGACATACAGATCGTTCTGCTGGTACG-----------------------CTGGCTGCTACATGCATAGCTAGTGTTACGGGCATCAT-ACCTGAC--TGATCGA--TG-C---------GAACG----------------------------------CGATG-----------CATGC-AGGGCACTGGCAAGAAGAAGTTCGAGCGCATGCTGATGAGCGCCGAGGAGAAGTACCCCGACAAGGTGCGCGCCGTGGTCAAGTTCAACACGGCGCTGGCACACCACATCATGGCCGGCGCCGACCTGCTGGCCGTCACCAGCCGCTTCGAGCCCTGCGGCCTCATCCAGCTCCAGGGGATGCGATACGGAACGGTACGATACGATACGATAC----------GAGCACTGCAGCAAAA--------TCCCTC----------TGAA---------------------TGATT-CCGATGTG--------ATTGATGGATGTGTGG---------------CGATTCTT---GCAGCCCTGCGCCTGCGCGTCCACCGGCGGACTCGTCGACACCATCATCGAAGGCAAGACAGGATTCCACATGGG-CCGCCTCAGCGTCGACGTAAG-C--------TGGACCTCTTGCATACCCT--GCCCTGCC---ATGGATGTTTTTCTACATG----TATAGATC--TGAATCAGCAAAGCAA-----------TTCTTGTTT-CGTCCTC--TCTTCCTCTCCCCAGTGCAACGTCGTGGAGCCGGCCGATGTGAAG-AAGGTGGCGACCACCTTGAAGCGTGCCATCAAGGTGGTCGGCACGCCGGCGTACGAGGAGATGGTCAAGAACTGCATGATCCAGGATCTGTCCTGGAAGGTACGACGT-ACA----GCA------CGCCGTCAGAGCA------GAGCAGAACAC-------TA-------------------------------------------GTCTC-GCTC-CT-----ATTGCTGATTGTGGTGGTGG----TTT----------ATTTGC-AAAATAAT-------T-CAGGGCCCTGCCAAGAACTGGGAGAACAAGG Sorghum_miliaceum_1_Chut1012 ----------------------------GGATCCCAGCAAGGACAAGTACATCGCCGTCAA-TACGACGTGTCAACGGTGAGC----------------TTTGCCAA------T-T-TGTTGCT--------------------ACTCTGCTCAT--GTAAATCTTTCA------GGCGCTGG-TTCTGA---GTGCAA-----CAA-----TGTCCAT-T-------TCAGGCTGTCGAGGCAAAGGCACTGAACAAGGAGGCGCTGCAGGCCGAGGTCGGGCTCCCGGTGGACCGGAAGATCCCGCTGGTGGCGTTCATCGGCAGGCTGGAGGAGCAGAAGGGCCCCGACGTCATGGCGGCCGCCATCCCGCTGCTCATGGAGGAGGACATACAGATCGTTCTGCTGGTACG-----------------------CTGGCTGCTACATGCATAGCTAGTGTTACGGGCATCAT-ACCTGAC--TGATCGA--TG-C---------GAATG----------------------------------CGATG-----------CATGC-AGGGCACTGGCAAGAAGAAGTTCGAGCGCATGCTGATGAGCGCCGAGGAGAAGTACCCCGACAAGGTGCGCGCCGTGGTCAAGTTCAACGCGGCGCTGGCACACCACATCATGGCCGGCGCCGACCTGCTGGCCGTCACCAGCCGCTTCGAGCCCTGCGGCCTCATCCAGCTCCAGGGGATGCGATACGGAACGGTACGATACGATACGATAC----------GAGCACTGCAGCAAAA--------TCCCTC----------TGAA---------------------TGATT-CCGATGTG--------ATTGATGGATGTGTGG---------------CGATTCTT---GCAGCCCTGCGCCTGCGCGTCCACCGGCGGACTCGTCGACACCATCATCGAAGGCAAGACAGGATTCCACATGGG-CCGCCTCAGCGTCGACGTAAG-C--------TGGACCTCTTGCATACCCT--GCCCTGCC---ATGGATGTTTTTCTACATG----TATAGATC--TGAATCAGCAAAGCAA-----------TTCTTGTTT-CGTCCTC--TCTTCCTCTCCCCAGTGCAACGTCGTGGAGCCGGCCGATGTGAAG-AAGGTGGCGACCACCTTGAAGCGTGCCATCAAGGTGGTCGGCACGCCGGCGTATGAGGAGATGGTCAAGAACTGCATGATCCAGGATCTGTCCTGGAAGGTACGTCGT-ACA----GCA------CGCCGTCAGAGCA------GAGCAGAACAC-------TT-------------------------------------------GTCTC-GCTC-CT-----ATTGCTGATTGTG------------------------------------------------------------------------------- Sorghum_miliaceum_2_Clayton5790 ATCGTCACGGCATGGACGTTAGCGAGTGGGATCCCAGCAAGGACAAGTACATCGCCGTCAAATACGACGTGTCAACGGTGAGC----GATC----GACCTTTGCCAA------T-T-TGTTGCT--------------------AGTCTGCTCAT--GTAAATCTTTCA------GGCGCTGG-TTCTGA---GTGCAA-----CAA-----TGTCCAT-T-------TCAGGCTGTCGAGGCAAAGGCACTGAACAAGGAGGCGCTGCAGGCCGAGGTCGGGCTCCCGGTGGACCGGAAGATCCCGCTGGTGGCGTTCATCGGCAGGCTGGAGGAGCAGAAGGGCCCCGACGTCATGGCGGCCGCCATCCCGCTGCTCATGGAGGAGGACATACAGATCGTTCTGCTGGTACG-----------------------CTGGCTGCTACATGCATAGCTAGTGTTACGGGCATCAT-ACCTGAC--TGATCGA--TG-C---------GAACG----------------------------------CGATG-----------CATGC-AGGGCACTGGCAAGAAGAAGTTCGAGCGCATGCTGATGAGCGCCGAGGAGAAGTACCCCGACAAGGTGCGCGCCGTGGTCAAGTTCAACACGGCGCTGGCACACCACATCATGGCCGGCGCCGACCTGCTGGCCGTCACCAGCCGCTTCGAGCCCTGCGGCCTCATCCAGCTCCAGGGGATGCGATACGGAACGGTACGATACGATACGATAC----------GAGCACTGCAGCAAAA--------TCCCTC----------TGAA---------------------TGATT-CCGATGTG--------ATTGATGGATGTGTGG---------------CGATTCTT---GCAGCCCTGCGCCTGCGCGTCCACCGGCGGACTCGTCGACACCATCATCGAAGGCAAGACAGGATTCCACATGGG-CCGCCTCAGCGTCGACGTAAG-C--------TGGACCTCTTGCATACCCT--GCCCTGCC---ATGGATGTTTTTCTACATG----TATAGATC--TGAATCAGCAAAGCAA-----------TTCTTGTTT-CGTCCTC--TCTTCCTCTCCCCAGTGCAACGTCGTGGAGCCGGCCGATGTGAAG-AAGGTGGCGACCACCTTGAAGCGTGCCATCAAGGTGGTCGGCACGCCGGCGTACGAGGAGATGGTCAAGAACTGCATGATCCAGGATCTGTCCTGGAAGGTACGACGT-ACA----GCA------CGCCGTCAGAGCA------GAGCAGAACAC-------TA-------------------------------------------GTCTC-GCTC-CT-----ATTGCTGATTGTGGTGGTGG----TTT----------ATTTGC-AAAATAAT-------T-CAGGGCCCTGCCAAGAACTGGGAGAACAAGG Sorghum_miliaceum_3_Clayton5790 ATCGTCACGGCATGGACGTTAGCGAGTGGGATCCCAGCAAGGACAAGTACATCGCCGTCAAATACGACGTATCAACGGTGAGC----------------TTTGCCAA------T-T-TGTTGCT--------------------ACTCTGCTCAT--GTAAATCTTTCA------GGCGCTGG-TTCTGA---GTGCAA-----CAA-----TGTCCAT-T-------TCAGGCTGTCGAGGCAAAGGCACTGAACAAGGAGGCGCTGCAGGCCGAGGTCGGGCTCCCGGTGGACCGGAAGATCCCACTGGTGGCGTTCATCGGCAGGCTGGAGGAGCAGAAGGGCCCCGACGTCATGGCGGCCGCCATCCCGCTGCTCATGGAGGAGGACATACAGATCGTTCTGCTGGTACG-----------------------CTGGCTGCTACATGCATAGCTAGTGTTACGGGCATCAT-ACCTGAC--TGATCGA--TG-C---------GAATG----------------------------------CGATG-----------CATGC-AGGGCACTGGCAAGAAGAAGTTCGAGCGCATGCTGATGAGCGCCGAGGAGAAGTACCCCGACAAGGTGCGCGCCGTGGTCAAGTTCAACGCGGCGCTGGCACACCACATCATGGCCGGCGCCGACCTGCTGGCCGTCACCAGCCGCTTCGAGCCCTGCGGCCTCATCCAGCTCCAGGGGATGCGATACGGAACGGTACGATACGATAC---------------GAGCACGGCAGCAAAA--------TCCCTC----------TGAA---------------------TGATT-CCGATGTG--------GTTGATGGATGTGTGG---------------CGATTCTT---GCAGCCCTGCGCCTGCGCGTCCACCGGCGGACTCGTCGACACCATCATCGAAGGCAAGACAGGATTCCACATGGG-CCGCCTCAGCGTCGACGTAAG-C--------TGGACCTCTTGCATACCCT--GCCCTGCC---ATGGATGTTTTTCTACATG----TATAGATC--TGAATCAGCAAAGCAA-----------TTCTTGTTT-CGTCCTC--TCTTCCTCTCCCCAGTGCAACGTCGTGGAGCCGGCCGATGTGAAG-AAGGTGGCGACCACCTTGAAGCGTGCCATCAAGGTGGTCGGCACGCCGGCGTACGAGGAGATGGTTAAGAACTGCATGATCCAGGATCTGTCCTGGAAGGTACGACGT-ACA----GCA------CGCCGTCAGAGCA------GAGCAGAACAC-------TT-------------------------------------------GTCTC-GCTC-CT-----ATTGCTGATTGTGGTGGTGG----TTT----------ATTTGC-AAAATAAT-------T-CAGGGCCCTGCCAAGAACTGGGAGAACAAGG Sorghum_virgatum_1_Silveus2770 ATCGTCACGGCACGGCCGTCAGCGAGTGGGATCCCAGCAAGGACAAGTACATCGCCGTCAAATACGACGTGTCAGCGGTGAGC----------------TTTGCCAA------T-T-CGTTGCT--------------------ACTCTGCTCAT--GTAAATCTTTCA------GGCGCTGG-TTCTGA---GTGCAA-----CAA-----TGTCCAT-T-------TCAGGCTGTCGAGGCAAAGGCACTGAACAAGGAGGCGCTGCAGGCCGAGGTCGGGCTCCCGGTGGACCGGAAGATCCCGCTGGTGGCGTTCATCGGCAGGCTGGAGGAGCAGAAGGGCCCCGACGTCATGGCGGCCGCCATCCCGCTGCTCATGGAGGAGGACATACAGATCGTTCTGCTGGTACG-----------------------CTGGCTGCTACATGCATAGCTAGTGTTACGGGCATCAT-ACCTGAC--TGATCGA--TG-C---------GAATG----------------------------------CGATG-----------CATGC-AGGGCACTGGCAAGAAGAAGTTCGAGCGCATGCTGATGAGCGCCGAGGAGAAGTACCCCGACAAGGTGCGCGCCGTGGTCAAGTTCAACGCGGCGCTGGCACACCACATCATGGCCGGCGCCGACCTGCTGGCCGTCACCAGCCGCTTCGAGCCCTGCGGCCTCATCCAGCTCCAGGGGATGCGATACGGAACGGTACGATACGATACGATAC----------GAGCACTGCAGCAAAA--------TCCCTC----------TGAA---------------------TGATT-CCGATGTG--------ATTGATGGATGTGTGG---------------CGATTCTT---GCAGCCCTGCGCCTGCGCGTCCACCGGCGGACTCGTCGACACCATCATCGAAGGCAAGACAGGATTCCACATGGG-CCGCCTCAGCGTCGACGTAAG-C--------TGGACCTCTTGCATACCCT--GCCCTGCC---ATGGATGTTTTTCTACATG----TATAGATC--TGAATCAGCAAAGCAA-----------TTCTTGTTT-CGTCCTC--TCTTCCTCTCCCCAGTGCAACGTCGTGGAGCCGGCTGATGTGAAG-AAGGTGGCGACCACCTTGAAGCGTGCCATCAAGGTGGTCGGCACGCCGGCGTACGAGGAGATGGTCAAGAACTGCATGATCCAGGATCTGTCCTGGAAGGTACGACGT-ACA----GCA------CGCCGTCAGAGCA------GAGCAGAACAC-------TT-------------------------------------------GTCTC-GCTC-CT-----ATTGCTGATTGTGGTGGTGG----TTT----------ATTTGC-AAAATAAT-------T-CAGGGCCCTGCCAAGAACTGGGAGAACAAGG Sorghum_arundinaceum_1_Liu232 --------------------------------------------AAGTACATCGCCGTCAA-TACGACGTGTCAACGGTGAGC----------------TTTGCCAA------T-T-TGTTGCT--------------------ACTCTGCTCAT--GTAAATCTTTCA------GGCGCTGG-TTCTGA---GTGCAA-----CAA-----TGTCCAT-T-------TCAGGCTGTCGAGGCAAAGGCACTGAACAAGGAGGCGCTGCAGGCCGAGGTCGGGCTCCCGGTGGACCGGAAGATCCCGCTGGTGGCGTTCATCGGCAGGCTGGAGGAGCAGAAGGGCCCCGACGTCATGGCGGCCGCCATCCCGCTGCTCATGGAGGAGGACATACAGATCGTTCTGCTGGTACG-----------------------CTGGCTGCTACATGCATAGCTAGTGTTACGGGCATCAT-ACCTGAC--TGATCGA--TG-C---------GAATG----------------------------------CGATG-----------CATGC-AGGGCACTGGCAAGAAGAAGTTCGAGCGCATGCTGATGAGCGCCGAGGAGAAGTACCCCGACAAGGTGCGCGCCGTGGTCAAGTTCAACGCGGCGCTGGCACACCACATCATGGCCGGCGCCGACCTGCTGGCCGTCACCAGCCGCTTCGAGCCCTGCGGCCTCATCCAGCTCCAGGGGATGCGATACGGAACGGTACGATACGATACGATACGATAC-----GAGCACTGCAGCAAAA--------TCCCTC----------TGAA---------------------TGATT-CCGATGTG--------ATTGATGGATGTGTGG---------------CGATTCTT---GCAGCCCTGCGCCTGCGCGTCCACCGGCGGACTCGTCGACACCATCATCGAAGGCAAGACAGGATTCCACATGGG-CCGCCTCAGCGTCGACGTAAG-C--------TGGACCTCTTGCATACCCT--GCCCTGCC---ATGGATGTTTTTCTACATG----TATAGATC--TGAATCAGCAAAGCAA-----------TTCTTGTTT-CGTCCTC--TCTTCCTCTCCCCAGTGCAACGTCGTGGAGCCGGCCGATGTGAAG-AAGGTGGCGACCACCTTGAAGCGTGCCATCAAGGTGGTCGGCACGCCGGCGTACGAGGAGATGGTCAAGAACTGCATGATCCAGGATCTGTCCTGGAAGGTACGACGT-ACA----GCA------CGCCGTCAGAGCA------GAGCAGAACAC-------TT-------------------------------------------GTCTC-GCTC-CT-----ATTGCTGATTGTGGTGGTGG------------------------------------------------------------------------ Sorghum_almum_1_Liu236_2 --------------------------------------------AAGTACATCGCCGTCAA-TACGACGTGTCAACGGTGAGC----------------TTTGCCAA------T-T-TGTTGCT--------------------ACTCTGCTCAT--GTAAATCTTTCA------GGCGCTGG-TTCTGA---GTGCAA-----CAA-----TGTCCAT-T-------TCAGGCTGTCGAGGCAAAGGCACTGAACAAGGAGGCGCTGCAGGCCGAGGTCGGGCTCCCGGTGGACCGGAAGATCCCGCTGGTGGCGTTCATCGGCAGGCTGGAGGAGCAGAAGGGCCCCGACGTCATGGCGGCCGCCATCCCGCTGCTCATGGAGGAGGACATACAGATCGTTCTGCTGGTACG-----------------------CTGGCTGCTACATGCATAGCTAGTGTTACGGGCATCAT-ACCTGAC--TGATCGA--TG-C---------GAATG----------------------------------CGATG-----------CATGC-AGGGCACTGGCAAGAAGAAGTTCGAGCGCATGCTGATGAGCGCCGAGGAGAAGTACCCCGACAAGGTGCGCGCCGTGGTCAAGTTCAACGCGGCGCTGGCACACCACATCATGGCCGGCGCCGACCTGCTGGCCGTCACCAGCCGCTTCGAGCCCTGCGGCCTCATCCAGCTCCAGGGGATGCGATACGGAACGGTACGATACGATACGATACGATAC-----GAGCACTGCAGCAAAA--------TCCCTC----------TGAA---------------------TGATT-CCGATGTG--------ATTGATGGATGTGTGG---------------CGATTCTT---GCAGCCCTGCGCCTGCGCGTCCACCGGCGGACTCGTCGACACCATCATCGAAGGCAAGACAGGATTCCACATGGG-CCGCCTCAGCGTCGACGTAAG-C--------TGGACCTCTTGCATACCCT--GCCCTGCC---ATGGATGTTTTTCTACATG----TATAGATC--TGAATCAGCAAAGCAA-----------TTCTTGTTT-CGTCCTC--TCTTCCTCTCCCCAGTGCAACGTCGTGGAGCCGGCCGATGTGAAG-AAGGTGGCGACCACCTTGAAGCGTGCCATCAAGGTGGTCGGCACGCCGGCGTACGAGGAGATGGTCAAGAACTGCATGATCCAGGATCTGTCCTGGAAGGTACGACGT-ACA----GCA------CGCCGTCAGAGCA------GAGCAGAACAC-------TT-------------------------------------------GTCTC-GCTC-CT-----ATTGCTGATTGTGGTGG--------------------------------------------------------------------------- Sorghum_almum_2_Liu237_2 --------------------------------------------AAGTACATCGCCGTCAA-TACGACGTGTCAACGGTGAGC----------------TTTGCCAA------T-T-TGTTGCT--------------------ACTCTGCTCAT--GTAAATCTTTCA------GGCGCTGG-TTCTGA---GTGCAA-----CAA-----TGTCCAT-T-------TCAGGCTGTCGAGGCAAAGGCACTGAACAAGGAGGCGCTGCAGGCCGAGGTCGGGCTCCCGGTGGACCGGAAGATCCCGCTGGTGGCGTTCATCGGCAGGCTGGAGGAGCAGAAGGGCCCCGACGTCATGGCGGCCGCCATCCCGCTGCTCATGGAGGAGGACATACAGATCGTTCTGCTGGTACG-----------------------CTGGCTGCTACATGCATAGCTAGTGTTACGGGCATCAT-ACCTGAC--TGATCGA--TG-C---------GAATG----------------------------------CGATG-----------CATGC-AGGGCACTGGCAAGAAGAAGTTCGAGCGCATGCTGATGAGCGCCGAGGAGAAGTACCCCGACAAGGTGCGCGCCGTGGTCAAGTTCAACGCGGCGCTGGCACACCACATCATGGCCGGCGCCGACCTGCTGGCCGTCACCAGCCGCTTCGAGCCCTGCGGCCTCATCCAGCTCCAGGGGATGCGATACGGAACGGTACGATACGATACGATACGATAC-----GAGCACTGCAGCAAAA--------TCCCTC----------TGAA---------------------TGATT-CCGATGTG--------ATTGATGGATGTGTGG---------------CGATTCTT---GCAGCCCTGCGCCTGCGCGTCCACCGGCGGACTCGTCGACACCATCATCGAAGGCAAGACAGGATTCCACATGGG-CCGCCTCAGCGTCGACGTAAG-C--------TGGACCTCTTGCATACCCT--GCCCTGCC---ATGGATGTTTTTCTACATG----TATAGATC--TGAATCAGCAAAGCAA-----------TTCTTGTTT-CGTCCTC--TCTTCCTCTCCCCAGTGCAACGTCGTGGAGCCGGCCGATGTGAAG-AAGGTGGCGACCACCTTGAAGCGTGCCATCAAGGTGGTCGGCACGCCGGCGTACGAGGAGATGGTCAAGAACTGCATGATCCAGGATCTGTCCTGGAAGGTACGACGT-ACA----GCA------CGCCGTCAGAGCA------GAGCAGAACAC-------TT-------------------------------------------GTCTC-GCTC-CT-----ATTGCTGATTGTGGTGG--------------------------------------------------------------------------- Sorghum_macrospermum_1_Adams889 ATCGTCACGGCATGGACGTTAGCGAGTGGGATCCCAGCAAGGACAAGTACATCGCCGTCAAATACGACGTGTCAACGGTGAGC---------TCTAATCT--GCCAA---------------------------------------TCC----ATTGCCGTCC---------GA-GGCACTGG-TTCTGA----CGCGG-----CAA----GTGTGCATC--------TCAGGCCGTGGAGGCGAAGGCGCTCAACGAGGAGGCGCTGCAGGCCGAGGTCGGCCTCCCTGTGGACCGGAAGATCCCGCTGGTGGCGTTCATCGGCAGGCTGGAGGAGCAGAAGGGCCCCGACATCATGGCGGCCGCCATCCCGCTGCTCATGGAGGAGGACGTGCAGATTGTCCTGCTGGTACG------------CCGCCACCCGGCTACTACATTATATGCGA-TGGCCTGGCCTGA--------CCTGACC-GG--CTACA---CC-ATT-GATG--------------------------------------CGATG-----------CATGC-AGGGCACGGGCAAGAAGAAGTTCGAGCGCATGCTGATGAGCGCCGAGGAGAAGTACCCCGACAAGGTGCGCGCCGTGGTCAAGTTCAACGCGGCGCTGGCGCACCACATCATGGCCGGCGCCGACCTGCTCACCGTCACCAGCCGCTTCGAGCCCTGCGGCCTCATCCAGCTCCAGGGGATGCGATACGGAACGGTACTT-------------------------GCACTGCATGCAGCAAAAAGA--CCCTC----------TGAA---------------------TGATTT-CGATGTGAATG-TG-ATTGATGCC----TGG---------------CGGTTCTT---GCAGCCCTGCGCCTGCGCATCCACCGGCGGACTCGTCGACACTATCATCGAAGGCAAGACCGGGTTCCACATGGG-CCGTTTCAGCGTCGACGTAAG--------GCT--ACCTCTTACCTACCCT--GCCCTGC-------------TTTCTATACACATGTGTGTATC--TGAATCAGCAAAGCGA-----------TTCTTGTTT-CGTCC----TTTCTTCCTCACCAGTGCAACGTCGTGGAGCCGGCCGACGTCAAG-AAGGTGGCGACCACCGTGAAGCGCGCCATCAAGGTGGTGGGCACGCCGGCGTACGAGGAGATGGTCAAGAACTGCATGATCCAGGATCTCTCCTGGAAGGT---ACGT-ACAGCTAGCA------CGCCGTCAGAGAACA----GAGCA------CCACCAA-----------------GATCG-TCG-TCGATCACACGC------GTCTC-GCTCGCTC-T--GTTGCTGATTGTGGTGG-------TTT------ATT-ATTTGC-GAAA-CAT-------TGCAGGGTCCTGCCAAGAACTGGGAGAACAAGG Sorghum_macrospermum_2_Adams889 ATCGTCACGGCATGGACGTCAGCGAGTGGGATCCCAGCAAGGACAAGTACATCGCCGTCAAATACGACGTGTCAACGGTGAGC---------TCTAATCT--GCCAA---------------------------------------TCC----ATTGCCGTCC---------GA-GGCACTGG-TTCTGA----CGCGG-----CAA----GTGTGCATC--------TCAGGCCGTGGAGGCGAAGGCGCTCAACAAGGAGGCGCTGCAGGCCGAGGTCGGCCTCCCTGTGGACCGGAAGATCCCGCTGGTGGCGTTCATCGGCAGGCTGGAGGAGCAGAAGGGCCCCGACATCATGGCGGCCGCCATCCCGCTGCTCATGGAGGAGGACGTGCAGATCGTCCTGCTGGTACG------------CCGCCGCCCGGCTACTACATTATATGCGA-TGGCCTGACCTGA--------CCTGACC-GG--CTACA---CC-ATT-GATG--------------------------------------CGATG-----------CATGC-AGGGCACGGGCAAGAAGAAGTTCGAGCGCATGCTGATGAGCGCCGAGGAGAAGTACCCCGACAAGGTGCGCGCCATGGTCAAGTTCAACGCGGCGCTGGCGCACCACATCATGGCCGGCGCCGACCTGCTCACCGTCACCAGCCGCTTCGAGCCCTGCGGCCTCATCCAGCTCCAGGGGATGCGATACGGAACGGTACTT-------------------------GCACTGCAAGCAGCAAAAAGA--CCCTC----------TGAA---------------------TGATTT-CGATGTGGATG-TG-ATTGATGCC----TGG---------------CGGTTCTT---GCAGCCCTGCGCCTGCGCATCCACCGGCGGACTCGTCGACACTATCATCGAAGGCAAGACCGGGTTCCACATGGG-CCGTTTCAGCGTCGACGTAAA--------GCT--ACCTCTTACCTACCCT--GCCCTGC-------------TTTCTATACACATGTGTGTATC--TGAATCAGCAAAGCGA-----------TTCTTGTTT-CGTCC----TTTCTTCCTCACCAGTGCAACGTCGTGGAGCCGGCCGACGTCAAG-AAG-TGGCGACCACCGTGAAGCGCGCCATCAAGGTGGTGGGCACGCCGGCGTACGAGGAGATGGTCAAGAACTGCATGATCCAGGATCTCTCCTGGAAGGT---ACGT-ACAGCTAGCA------CGCCGCCAGAGAACA----GAGCA------CCACCAA-----------------GATCG-TCG-TCGATCACACGC------GTCTC-GCTCGCTC-T--GTTGCTGATTGTGGTGG-------TTT------ATT-ATTTGC-AAAA-CAT-------TGCAGGGTCCTGCCAAGAACTGG-AGAACAAGG Sorghum_macrospermum_3_Adams889_3 ATCGTCACGGCATGGACGTCAGCGAGTGGGATCCCAGCAAGGACAAGTACATCGCCGTCAAATACGACGTGTCAACGGTGAGC---------TCTAATCT--GCCAA---------------------------------------TCC----ATTGCCGTCC---------GA-GGCACTGG-TTCTGA----CGCGG-----CAA----GTGTGCATC--------TCAGGCCGTGGAGGCGAAGGCGCTCAACAAGGAGGCGCTGCAGGCCGAGGTCGGCCTCCCTGTGGACCGGAAGATCCCGCTGGTGGCGTTCATCGGCAGGCTGGAGGAGCAGAAGGGCCCCGACATCATGGCGGCCGCCATCCCGCTGCTCATGGAGGAGGACGTGCAGATCGTCCTGCTGGTACG------------CCGCCGCCCGGCTACTACATTATATGCGA-TGGCCTGACCTGA--------CCTGACC-GG--CTACA---CC-ATT-GATG--------------------------------------CGATG-----------CATGC-AGGGCACGGGCAAGAAGAAGTTCGAGCGCATGCTGATGAGCGCCGAGGAGAAGTACCCCGACAAGGTGCGCGCCGTGGTCAAGTTCAACGCGGCGCTGGCGCACCACATCATGGCCGGCGCCGACCTGCTCACCGTCACCAGCCGCTTCGAGCCCTGCGGCCTCATCCAGCTCCAGGGGATGCGATACGGAACGGTACTT-------------------------GCACTGCAAGCAGCAAAAAGA--CCCTC----------TGAA---------------------TGATTT-CGATGTGGATG-TG-ATTGATGCC----TGG---------------CGGTTCTT---GCAGCCCTGCGCCTGCGCATCCACCGGCGGACTCGTCGACACTATCATCGAAGGCAAGACCGGGTTCCACATGGG-CCGTTTCAGCGTCGACGTAAG--------GCT--ACCTCTTACCTACCCT--GCCCTGC-------------TTTCTATACACATGTGTGTATC--TGAATCAGCAAAGCGA-----------TTCTTGTTT-CGTCC----TTTCTTCCTCACCAGTGCAACGTCGTGGAGCCGGCCGACGTCAAG-AAGGTGGCGACCACCGTGAAGCGCGCCATCAAGGTGGTGGGCACGCCGGCGTACGAGGAGATGGTCAAGAACTGCATGATCCAGGATCTCTCCTGGAAGGT---ACGT-ACAGCTAGCA------CGCCGCCAGAGAACA----GAGCA------CCACCAA-----------------GATCG-TCG-TCGATCACACGC------GTCTC-GCTCGCTC-T--GTTGCTGATTGTGGTGG-------TTT------ATT-ATTTGC-AAAA-CAT-------TGCAGGGTCCTGCCAAGAACTGGGAGAACAAGG Sorghum_laxiflorum_2_Hartley245 ATCGTCACGGCATGGACGTCAGCGAGTGGGATCCCAGCAAGGACAAGTACATCGCCGTCAAATACGACGTGTCAACGGTGAGC---------TCTAATCT--GCCAA---------------------------------------TCC----ATTGCCGTCC---------GA-GGCAATGG-TTCTGA----CGCGG-----CAA----GTGTGCATC--------TCAGGCCGCGGAGGCGAAGGCGCTCAACAAGGAGGCGCTGCAGGCCGAGGTCGGCCTCCCTGTGGACCGGAAGATCCCGCTGGTGGCGTTCATCGGCAGGCTGGAGGAGCAGAAGGGCCCCGACGTTATGGCGGCCGCCATCCCGCTGCTTATGGAGGAGGACGTGCAGATCGTCGTGCTGGTACG------------CCGCCGCCCGGCTACTACATTATATGCGA-TGGCCTGTCCTGA--------CCTGACC-GG--CTACA---CC-ATC-GATG--------------------------------------CGATG-----------CATGC-AGGGCACGGGCAAGAAGAAGTTCGAGCGCATGCTGATGAGCGCCGAGGAGAAGTACCCTGACAAGGTGCGCGCCGTGGTCAAGTTCAACGCGGCGCTGGCGCACCACATCATGGCCGGCGCCGACCTGCTCACCGTCACCAGCCGCTTCGAGCCCTGCGGCCTCATCCAGCTCCAGGGGATGCGATACGGAACGGTAC-------------------------GAGCACTGCATGCAGCATAAAA---CCCTC----------TGAA---------------------TGATTT-CGATGTGAATG-TG-ATTGATGCC----TGG---------------CGATTCTT---GCAGCCCTGCGCCTGCGCATCCACCGGGGGACTCGTCGACACCATCATCGAAGGCAAGACCGGGTTCCACATGGG-CCGTCTCAGCGTCGACGTAAG--------GCT--ACCTCTTACCTACCCT--GCCCTGC-------------TTTCTACATACATGTATGTATC--TGAATCAGCAAAGCGA-----------TTCTTGTTT-CGTCC----TTTCTTCCTCCCCAGTGCAACGTCGTGGAGCCGGCCGACGTCAAG-AAGGTGGCGACCACCGTGAAGCGCGCCATCAAGGTGGTGGGCACGCCGGCGTACGAGGAGATGGTCAAGAACTGCATGATCCAGGATCTCTCCTGGAAGGT---ACGT-ACA----GCA------CGCCGTCAGAGCACA----GAGCA------CCACCAA-----------------GATCG-TCG-TCGATCACACGC------GTCTC-GCTCGCTC-T--GTTGCTGATTGTGGTGG-------TTT------ATT-ATCTGC-AAAA-CAT-------TGCAGGGTCCTGCCAAGAACTGGGAGAACAAGG Sorghum_laxiflorum_1_Liu244_2 ATCGTCACGGCATGGACGTCAGCGAGTGGGATCCCAGCAAGGACAAGTACCTCGCCGTCAAATACGACGTGTCAACGGTGAGC---------TCTAATCT--GCCAA---------------------------------------TCC----ATTGCCGTCC---------GA-GGCAATGG-TTCTGA----CGCGG-----CAA----GTGTGCATC--------TCAGGCCGTGGAGGCGAAGGCGCTCAACAAGGAGGCGCTGCAGGCCGAGGTCGGCCTCCCTGTGGACCGGAAGATCCCGCTGGTGGCGTTCATCGGCAGGCTGGAGGAGCAGAAGGGCCCCGACGTTATGGCGGCCGCCATCCCGCTGCTTATGGAGGAGGACGTGCAGATCGTCGTGCTGGTACG------------CCGCCGCCCGGCTACTACATTATATGCGA-TGGCCTGTCCTGA--------CCTGACC-GG--CTACA---CC-ATC-GATG--------------------------------------CGATG-----------CATGC-AGGGCACGGGCAAGAAGAAGTTCGAGCGCATGCTGATGAGCGCCGAGGGGAAGTACCCTGACAAGGTGCGCGCCGTGGTCAAGTTCAACGCGGCGCTGGCGCACCACATCATGGCCGGCGCCGACCTGCTCACCGTCACCAGCCGCTTCGAGCCCTGCGGCCTCATCCAGCTCCAGGGGATGCGATACGGAACGGTAC-------------------------GAGCACTGCATGCAGCATAAAA---CCCTC----------TGAA---------------------TGATTT-CGATGTGAATG-TG-ATTGATGCC----TGG---------------CGATTCTT---GCAGCCCTGCGCCTGCGCATCCACCGGGGGACTCGTCGACACCATCATCGAAGGCAAGACCGGGTTCCACATGGG-CCGTCTCAGCGTCGACGTAAG--------GCT--ACCTCTTACCTACCCT--GCCCTGC-------------TTTCTACATACATGTATGTATC--TGAATCAGCAAAGCGA-----------TTCTTGTTT-CGTCC----TTTCTTCCTCCCCAGTGCAACGTCGTGGAGCCGGCCGACCTCAAG-AAGGTGGCGACCACCGTGAAGCGCGCCATCAAGGTGGTGGGCACGCCGGCGTACGAGGAGATGGTCAAGAACTGCATGATCCAGGATCTCTCCTGGAAGGT---ACGT-ACA----GCA------CGCCGTCAGAGCACA----GAGCA------CCACCAA-----------------GATCG-TCG-TCGATCACACGC------GTCTC-GCTCGCTC-T--GTTGCTGATTGTGGTGG-------TTT------ATT-ATTTGC-AAAA-CAT-------TGCAGGGTCCTGCCAAGAACTGGGAGAACAAGG Bothriochloa_bladhii_1_Liu250_2 ATCGTCACGGCATGGACGTCAGCGAGTGGGATCCCAGCAAGGACAAGTACATTGCCGTCAAATACGACGTGTCAACGGTGAGC----GATC----GACCTTTGCCAA------TCTCTGTTGCC-----GGGCCAGCCCGGTT-----GTGTAAATTTCATCATTCCCAGGC-------------TCTGA----CGAGG-----CAA----GTGTGCAT-T-------TCAGGCCTTGGAGGCGAAGGCGCTGAACAAGGAGGCGCTGCAGGCCGAGGTCGGCCTCCCGGTGGACTCGAAGATCCCGCTGGTGGCGTTCATCGGCAGGCTGGAGGAGCAGAAGGGCCCCGACGTCATGGCGGCCGCCATCCCCGAGCTCATGGAGGAGGACGTGCAGATCGTTCTGCTGGTACG-------------------GCGGCTACT------ACATGCAT------AGTGTTACGGGC----ATCACCAGGACAATG----TGGTTGAGAC-ATGACTGAT-----------------------------CGATGC--G---ATGCAATGC-AGGGCACGGGCAAGAAGAAGTTCGAGCGCATGCTGATGAGCGCCGAGGAGAAGTACCCCAACAAGGTGCGCGCCGTGGTCAAGTTCAACGCGGCGCTGGCGCACCACATCATGGCCGGCGCCGACCTGCTCGCCGTCACTAGCCGCTTCGAGCCCTGCGGCCTCATCCAGCTCCAGGGGATGCGATACGGAACGGTAAC---------AAGCACCGC------------TGAAGCAGCAGAAAA-----CCTC----------TGAA---------------------TGATTT-CGATGTGAAT-ATG-ATAGAAG----TCTGG---------------CAATTCTTGCTGCAGCCCTGCGCCTGCGCGTCCACCGGCGGACTCGTCGACACCATCATCGAAGGCAAGACCGGGTTCCACATGGG-CCGCCTCAGCGTCGACGTAAG--------GCT--AGCTCGATGTTACTCT--GCCCTGCC-------ATGTTTTTG---------TACATGT---GTGAATCTGAATCAGA-----AAAGCGATTCTTGTTT-CGTCCT-------TTCTTCCCCAGTGCAACGTCGTGGAGCCGGCCGACGTCAAG-AAGGTGGCGACGACCTTGAAGCGCGCCATCAAGGTGGTGGGCACGCCGGCGTACGAGGAAATGGTGAAGAACTGCATGATCCAGGATCTCTCCTGGAAGGTAC--------AGTA----------CGCCGTCAGAGCA------GAGCA------CCAA-----------------GATCGATC---------ACACA------------------TCCT-----GTTGCTGATTGTGGTGGTTCA---TT-----------GTTTGCAAAAATAAT----AA-TACAGGGTCCTGCCAAGAACTGGGAGAACAAGG Dichanthium_annulatum_1_Liu248_2 ATCGTCACGGCATGGACGTCAGCGAGTGGGATCCAAGCAAGGACAAATACATCACCGTCAAATACGATGTTTCAACGGTGAGC------------GACCTTTGCCAA------TCTGTGTTGCCGGCCCGGCCGACCGGCCTG--CTCGTGTAAATTTTCGTCC--CCAGGC----TCTCTGG-TTCTGA----CGCGG-----CAA----GTGTG-----CGTTC---CAGGCCATGGAGGCGAAGGCGCTCAACAAGGAGGCGCTGCAGGCCGAGGTCGGCCTGCCGGTGGACCGGAAGATCCCGCTGGTGGCGTTCATCGGCAGGCTGGAGGAGCAGAAGGGTCCCGACGTCATGGCGGCGGCCATCCCCGAGCTCATGGAGGAGGACGTGCAGATCGTTCTGCTGGTACG-------------------CCGGCTACT------CCATGCAT------AGTGTTACGGGCATCAATCAGCTGGGCAATG----TGGTT--GAC-CTGACTGAT-----------------------------CGATGCATG-------C-TGC-AGGGAACGGGCAAGAAGAAGTTCGAGCGCATGCTGATGAGCGCCGAGGAGAAGTACCCCGACAAGGTCCGCGCCGTGGTCAAGTTCAACGCGGCGCTGGCGCACCACATCATGGCCGGCGCCGACCTGCTCGCCGTCACCAGCCGCTTCGAGCCCTGCGGCCTCATCCAGCTCCAGGGGATGCGATACGGAACGGTACGAT-------GAGCACGGC--------AGCAGCAGAGAAACAT-TTTGAATCCT--GA------TGAGACTGACAGAGAGAGACGATGGATGATTT-CGATGTGATTG-TG-ATTGATG--TCTTTGG---------------TGATTGTT---GCAGCCCTGCGCCTGCGCGTCCACCGGCGGACTCGTCGACACCATCATCGAAGGCAAGACCGGGTTCCACATGGG-CCGCCTCAGGGTCGACGTAAG--------GCT--AGCTCGACCTTACTTT--GCCCTGC-------TATGTTTTTC---------GACGTGT---TTGAATTTGAATCAGC-----AAAGCGATTTTTGTTTT-GTCCA----TTTTTCCTCCCCAGTGCAACGTCGTGGAGCCGGCCGACGTGAAG-AAGGTGGCGACGACCTTGAAGCGCGCCATCAAGGTGGTGGGCACGCCGGCGTACGAGGAGATGGTCAAGAAATGCATGATCCAGGATCTTTCCTGGAAGGTAC--------AGTACAG-----CACGCCGTCAGACTTTTT---GAGCAGAGCAC-CATAT---CACATACTCGGAACAGC-AAG-TCTTTGCACGCACCACGCGT------T---TCCT-----GTTGCTGATTGTAGTTTTTTTTTCTTTTTCTTTTTTTTTTTGC-AAAATA-T-------TGCAGGGTCCTGCCAAGAACTGGGAGAACAAGG Dichanthium_annulatum_2_Liu256 ATCGTCACGGCATGGACGTCAGCGAGTGGGATCCAAGCAAGGACAAATACATCACCGTCAAATACGATGTTTCAACGGTGAGC------------GACCTTTGCCAA------TCTGTGTTGCCGGCCCGGCCGACCGGCCTG--CTCGTGTAAATTTTCGTCC--CCAGGC----TCTCTGG-TTCTGA----CGCGG-----CAA----GTGTG-----CGTTC---CAGGCCATGGAGGCGAAGGCGCTCAACAAGGAGGCGCTGCAGGCCGAGGTCGGCCTGCCGGTGGACCGGAAGATCCCGCTGGTGGCGTTCATCGGCAGGCTGGAGGAGCAGAAGGGCCCCGACGTCATGGCGGCCGCCATCCCCGAGCTCATGGAGGAGGACGTGCAGATCGTTTTGCTGGTACG-------------------CCGGGTATT------CCATGCAT------AGTGTTACGGGC----ATCAGCAGGACAATGAGGTTGGTT--GAC-CTGACTGAT-----------------------------CGATGCATG-------C-TGC-AGGGAACGGGCAAGAAGAAGTTCGAGCGCATGCTGATGAGCGCCGAGGAGAAGTACCCGGACAAGGTGCGCGCCGTGGTCAAGTTCAACGCGGCGCTGGCGCACCATATCATGGCCGGCGCCGACCTGCTCGCCGTCACCAGCCGCTTCGAGCCCTGTGGCCTCATCCAGCTCCAGGGAATGCGATACGGAACGGTACGAT-------GAGCTCGGC--------AGCAGCAGAGAAACAT-TCTGAATCCT--GA------TGAGACTGACAGAGAGAGACGATGGATGATTT-CGATGTGATTG-TG-ATTGATG--TCTCTGG---------------TGATTGTT---GCAGCCCTGCGCCTGCGCGTCCACCGGCGGACTCGTTGACCCTATCATCAAAGGCAAGACCGGGTTCCACATGGG-TCGCCTCAGCGTCGACGTAAG--------GCT--AGCTCGATCTTACTCT--GCCCTGC-------TATGGTTTTC---------GACATGT---TTGAATCTGAACCAGC-----AAAGCGATTCT-GTTT-CGCCCT----TCCTTCTTGCGCAGTGTAACGTCGTGGAGCCGGCCGACGTGAAG-AAGGTGGCGACGACCTTGAAGCGCGCCATCAAGGTGGTGGGCACGCCGGCGTACGAGGAGATGGTCAAGAACTGCATGATTCAGGATCTCTCCTGGAAGGTAC--------AGT--TG-----CACGCCGTCAGACGATCG---GAGCAGAGAAC-CAGAT---CACAGACTCGGAACAGC-AAG-TC-TTGCACGCACCACGCGTC---------TCCT-----GTTGCTAATTGTAG----------TTT----------ATTTGC-AAAA-CAT-------TGCAGGGTCCTGCCAAGAACT-GGAGAACAAGG Dichanthium_annulatum_3_Liu256 ATCGTCACGGCATGGACGTCAGCGAGTGGGATCCAAGCAAGGACAAATACATCACCGTCAAATACGATGTTTCAACGGTGAGC------------GACCTTTGCCAA------TCTGTGTTACCGGCCCGGCCGACCGGCCTG--CTCGTGTAAATTTTCGTCC--CCAGGC----TCTCTGG-TTCTGA----CGCGG-----CAA----GTGTG-----CGTTC---CAGGCCATGGAGGCGAAGGCGCTCAACAAGGAGGCGCTGCAGGCCGAGGTCGGCCTGCCGGTGGACCGGAAGATCCCGCTGGTGGCGTTCATCGGCAGGCTGGAGGAGCAGAAGGGCCCCGACGTCATGGCGGCTGCCATCCCCGAGCTCATGGAGGAGGACGTGCAGATCGTTTTGCTGGTACG-------------------CCGGCTACT------CCATGCAT------AGTGTTACGGGC----GTCAGCAGGACAATGAGGTTGGTT--GAC-CTGACTGAT-----------------------------CGATGCATG-------C-TGC-AGGGAACGGGCAAGAAGAAGTTCGAGCGCATGCTGATGAGCGCCGAGGAGAAGTACCCGGACAAGGTGCGCGCCGTGGTCAAGTTTAACGCGGCGCTGGCGCACCATATCATGGCCGGCGCCGACCTGCTCGCCGTCACCAGCCGCTTCGAGCCCTGCGGCCTCATCCAGCTCCAGGGGATGCGATACGGAACGGTACGAT-------GAGCTCGGC--------AGCAGCAGAGAAGCAT-TCTGAATCCT--GA------TGAGACTGACAGAGAGAGACGATGGATGATTT-CGATGTGATTG-TG-ATTGATG--TCTCTGG---------------TGATTGTT---GCAGCCCTGCGCCTGCGCGTCCACCGGCGGACTCGTTGACACTATCATCGAAGGCAAGACCGGGTTCCACATGGG-TCGCCTCAGCGTCGACGTAAG--------GCT--AGCTCGATCTTACTCT--GCCCTGC-------TATGGTTTTC---------GACATGT---TTGAATCTGAACCAGC-----AAAGCGATTCT-GTTT-CGCCCT----TCCTTCTTGCGCAGTGTAACGTCGTGGAGCCGGCCGACGTGAAG-AAGGTAGCGACGACCTTGAAGCGCGCCATCAAGGTGGTGGGCACGCCGGCGTACGAGGAGATGGTCAAGAACTGCATGATTCAGGATCTCTCCTGGAAGGTAC--------AGT--TG-----CACGCCGTCAGATGATCG---GAGCAGAGAAC-CAGAT---CACAGACTCGGAACAGC-AAG-TC-TTGCACGCACCACGCGTC---------TCCT-----GTTGCTAATTGTAG----------TTT----------ATTTGC-AAAA-CAT-------TGCAGGGTCCTGCCAAGAACTGGGAGAACAAGG Chrysopogon_serrulatus_2_Liu255 ATCGTCACGGCATGGACGTCAGCGAGTGGGATCCCAGCAAGGATAAGTACATCGCCGTCAAATACGACGTGTCAACGGTGAGC----GATC------------------------TGCTGCT--GGCCCGG-----------------------------------------------------TTCTGA----CGC-----TGCAGGTGCGCAT-CATC--------TCAGGCCGTGGAGGCCAAGGCGCTGAACAAGGAGGCGCTGCAGGCAGAGGTCGGGCTCCCGGTGGACCGGAACATCCCGCTGGTGGCGTTCATCGGCAGGCTGGAGGAGCAGAAGGGCCCCGACGTCATGGCGGCCGCCATCCCGGAGCTCATGGAGGAGGACGTGCAGATCGTTCTGCTGGTACG------------CCGCCGCCCGGCTACT------ACATACAT------AGTGCT------------CAAAATGAAAATG----TGGCT--GAC-CTGACTGATGTGAGAAA-------------------CACGATCCATGCG-ATGC-ATGC-AGGGCACTGGCAAGAAGAAGTTCGAGCGCATGCTGATGAGCGCCGAGGAGAAGTACCCGGACAAGGTGCGCGCCGTGGTCAAGTTCAACGCGCCGCTGGCGCACCACATCATGGCCGGCGCCGACCTGCTCGCCGTCACCAGCCGCTTCGAGCCCTGCGGCCTCATCCAGCTCCAGGGGATGCGATACGGAACGGTAA----------GAACACTGC----------AGCAAAAAAAC----------CCCTC----------TGAA--------------ATCTGGATGATTTT-GATGTGATT----CGTGGATG----TCTGG---------------CGATTGTT---GCAGCCCTGCGCCTGCGCGTCCACCGGCGGACTCGTCGACACCATCATCGAAGGCAAGACCGGATTCCACATGGG-CCGCCTCAGCGTCGACGTACG--------GCT--ACCTCTTACATACCCT--GCCCTTC-------AATGTTTTTC---------TGCATAC---AT--GTATGAATCTGC-----AAAGCAATTCTTTGTT-CGTCCT-----TTCTTCTCCACAGTGCAACGTCGTGGAGCCGGCCGACGTCAAG-AAGGTGGCGACCACCCTGAAGCGCGCCATCAAGGTGGTCGGCACGCCGGCGTACGAGGAGATGGTCAAGAACTGCATGATCCAGGATCTCTCCTGGAAGGTAC-A-GT-ACAGTACAG-----CCCCCCGTCAGAGCA------GAGCA------CCAA-----------------GATCGATCGATCGGTCACAC--GC----GTCTCA-CT-GCTC-T-----GTTGCTGATTTGTCGTGTGG----TTT----------ATCTG-AAAAA--------CAATGCAGGGTCCTGCCAAGAACTGGGAGAACAAGG Chrysopogon_serrulatus_3_Santos6311_3 ATCG-CACGGCATGGACGTCAGCGAGTGGGATCCCAGCAAGGATAAGTACATCGCCGTCAAATACGACGTGTCAACGGTGAGCAATCGATCGTGCGAGCTTTGCCGA------TCTGCTGCT--GGCCCGG-----------------------------------------------------TTCTGA----CGC-----TGCAGGTGCGCAT-CATC--------TCAGGCCGTGGAGGCCAAGGCGCTGAACAAGGAGGCGCTGCAGGCAGAGGTCGGGCTCCCGGTGGACCGGAACATCCCGCTGGTGGCGTTCATCGGCAGGCTGGAGGAGCAGAAGGGCCCCGACGTCATGGCGGCCGCCATCCCGGAGCTCATGGAGGAGGACGTGCAGATCGTTCTGCTGGTACG------------CCGCCGCCCGGCTACT------ACATACAT------AGTGCT------------CAAAATGAAAATG----TGGCT--GAC-CTGACTGGTGTGAGAAA-------------------CACGATCCATGCG-ATGC-ATGC-AGGGCACTGGCAAGAAGAAGTTCGAGCGCATGCTGATGAGCGCCGAGGAGAAGTACCCGGACAAGGTGCGCGCCGTGGTCAAGTCCAACGCGGCGCTGGCGCACCACATCATGGCCGGCGCCGACCTGCTCGCCGTCACCAGCCGCTTCGAGCCCTGCGGCCTCATCCAGCTCCAGGGGATGCGATACGGAACGGTAA----------GAACACTGC----------AGCAAAAAAAC----------CCCTC----------TGAA--------------ATCTGGACGATTTT-GATGTGATT----CGTGGATG----TCTGG---------------CGATTGTT---GCAGCCCTGCGCCTGCGCGTCCACCGGCGGACTCGTCGACACCATCATCGAAGGCAAGACAGGATTCCACATGGG-CCGCCTCAGCGTCGACGTAA---------GCTGGACCTCTTGCATACCCT--GCCCTGCC---ATGGATGTTTTTC---------TACATGT---ATAGATCTGAATCAGC-----AAAGCAATTCTTGTTT-CGTCCTC--TCTTCCTCTCCCCAGTGCAACGTCGTGGAGCCGGCCGATGTGAAG-AAGGTGGCGACCACCTTGAAGCGTGCCATCAAGGTGGTCGGCACGCCGGCGTACGAGGAGATGGTCAAGAACTGCATGATCCAGGATCTGTCCTGGAAGGTACGACGT-ACAG--CA--------CGCCGTCAGAGCA------GAGCAGAACAC----TT-------------------------------------------GTCTC-GCTC-CT--------ATTGCTGATTGTGGTGGTGG----TTT----------ATTTGC-AAAATAAT-------T-CAGGGCCCTGCCAAGAACTGGGAGAACAAGG Chrysopogon_serrulatus_1_Liu255_4 ATCGTCACGGCATGGACGTCAGCGAGTGGGATCCCAGCAAGGATAAGTACATCGCCGTCAAATACGACGTGTCAACGGTGAGCAATCGATCGAGCGAGCTTTGCCGA------TCTGCTGCT--GGCCCGG-----------------------------------------------------TTCTGA----CGC-----TGCAGGTGCGCAT-CATC--------TCAGGCCGTGGAGGCCAAGGCGCTGAACAAGGAGGCGCTGCAGGCAGAGGTCGGGCTCCCGGTGGACCGGAACATCCCGCTGGTGGCGTTCATCGGCAGGCTGAAGGAGCAGAAGGGCCCCGACGTCATGGCGGCCGCCATCCCGGAGCTCATGGAGGAGGACGTGCAGATCGTTCTGCTGGTACG------------CCGCCGCCCGGCTACT------ACATACAT------AGTGCT------------CAAAATGAAAATG----TGGCT--GAC-CTGACTGATGTGAGAAA-------------------CACGATCCATGCG-ATGC-ATGC-AGGGCACTGGCAAGGAGAAGTTCGAGCGCATGCTGATGAGCGCCGAGGAGAAGTACCCGGACAAGGTGCGCGCCGTGGTCAAGTTCAACGCGCCGCTGGCGCACCACATCATGGCCGGCGCCGACCTGCTCGCCGTCACCAGCCGCTTCGAGCCCTGCGGCCTCATCCAGCTCCAGGGGATGCGATACGGAACGGTAA----------GAACACTGC----------AGCAAAAAAAC----------CCCTC----------TGAA--------------ATCTGGATGATTTT-GATGTGATT----CGTGGATG----TCTGG---------------CGATTGTT---GCAGCCCTGCGCCTGCGCGTCCACAGGCGGACTCGTCGACACCATCATCGAAGGCAAGACCGGATTCCACATGGG-CCGCCTCAGCGTCGACGTACG--------GCT--ACCTCTTACATACCCT--GCCCTTC-------AATGTTTTTC---------TGCATAC---AT--GTATGAATCTGC-----AAAGCAATTCTTTGTT-CGTCCT-----TTCTTCTCCACAGTGCAACGTCGTGGAGCCGGCCGACGTCAAG-AAGGTGGCGACCACCCTGAAGCGCGCCATCAAGGTGGTCGGCACGCCGGCGTACGAGGAGATGGTCAAGAACTGCATGATCCAGGATCTCTCCTGGAAGGTAC-A-GT-ACAGTACAG-----CCCCCCGTCAGAGCA------GAGCA---CCAA-----------------GATCGATCGATCGGTCACAC--GC----GTCTCA-CT-GCTC-T--------GTTGCTGATTTGTCGTGTGG----TTT----------ATCTG-AAAAA--------CAATGCAGGGTCCTGCCAAGAACTGGGAGAACAAGG Cleistachne_sorghoides_B1_Jackson_sn ATCGTCACGGCATGGACGTCAGCGAGTGGGATCCCAGCAAGGACAAGTACATCGCCGTCAAATACGACGTGTCAACGGTGAGC---------------TTTT-------------GTTGCTGCCCCGGCCGGCCGG-CCGGTTCGATAGTGTCAATCTCATTATTCCCAGGCGACGTCGCTGG-TTCTGA----CGCGG-----CAAA---GTGTCCATCTCGTTCGATCAGGCCGTGGAGGCGAAGGCGCTGAACAAGGAGGCGCTGCAGGCCGAGGTCGGTCTCCCGGTGGACCGCAAGATCCCGCTGGTGGCGTTCATCGGCAGGCTGGAGGAGCAGAAGGGCCCCGACGCCATGGCGGCCGCCATCCCGCTGCTCATGGAGGAGGACGTGCAGATCGTTCTGCTG-----------------------------------------------------------------------------------------------------------------------------------------------------------------GGCACGGGGAAGAAGAAGTTCGAGCGCATGCTGATGAGCGCCGAGGAGAAGTACCCCGACAAGGTGCGCGCCGTGGTGAAGTTCAACGCGGCGCTGGCGCACCACATCATGGCCGGTGCCGACCTGCTCGCCGTCACCAGCCGCTTCGAGCCCTGCGGCCTCATCCAGCTCCAGGGGATGCGATACGGAACGGTACGAGCA-----GAGCACTGC--ATG-------TCTGCAAAAAATAAAAA--TCCTC----------TGAA---------------------TGATTT-CGATGTGGTTGATG----GATG----TCTGG---------------CGATTCTT---GCAGCCCTGCGTCTGCGCGTCCACCGGCGGACTCGTCGACACCGTCATCGAAGGCAAGACCGGGTTCCACATGGG-CCGCCTCAGCGTCGACGTAAGG-AGGCTAGCT--ACCTCTTCCATACCCT--GCCCTGCCGCCATGGATGTTTTTCTATCCTACATACATGT---ATGAATCTGAATCAGC-----AAAGTGATACTTGTGT-CGTCGTCCTTTTCTTCCTCCCCAGTGCAACGTCGTGGAGCCGGCCGACGTCAAG-AAGGTGGCGACCACCGTGAAGCGCGCCATCAAGGTGGTGGGCACGCCGGCGTACGAGGAGATGGTCAAGAACTGCATGATCCAGGACCTCTCCTGGAAGGTAC----T-CCAGTACAG-----TCCCCCGTCAGAGCACA----GAGCAG---CACCAA-------------GATCGATCGATCGATCGATCACACAC------GTCTC-GCTCGCTCCGAT---CCTGTTGCTGATTGTGGTGCTAA-TTTATT-------GTTTGC-AAAA----TGT----TGCAGGGTCCTGCCAAGAACTGGGAGAACAAGG Cleistachne_sorghoides_B2_Reekmans12070 ATCGTCACGGCATGGACGTCAGCGAGTGGGATCCCAGCAAGGACAAGTACATCGCCGTCAAATACGACGAGTCAACGGTGAGC----------------TTT-------------GTTGCTGCCCCGGCCGGCCGGCCGGCTC-----GTGTCATTCTCATTATTCCCAGGCGGCGTCGCTGG-TTCTGA----CGCGG-----CAAGTCCGTGTCCATCTC-TT---TCAGGCCGTGGAGGCGAAGGCGCTGAACAAGGAGGCGCTGCAGGCGGAGGTCGGTCTCCCGGTGGACCGCAAGATCCCGCTGGTGGCGTTCATCGGCAGGCTGGAGGAGCAGAAGGGCCCCGACGTCATGGCGGCCGCCATCCCGCTGCTCATGGAGGAGGACGTGCAGATCGTTCTGCTG-----------------------------------------------------------------------------------------------------------------------------------------------------------------GGCACGGGCAAGAAGAAGTTCGAGCGCATGCTGATGAGCGCCGAGGGGAAGTACCCCGACAAGGTGCGCGCCGTGGTGAAGTTCAACGCGGCGCTGGCGCACCACATCATGGCCGGCGCCGACCTGCTCGCCGTCACCAGCCGCTTCGAGCCCTGCGGCCTCATCCAGCTCCAGGGGATGCGATACGGAACGGTACGAGCA-----GAGCACTGC--ATG----CAGCAAAAAAAA----------CCCTC----------TGAA---------------------TAATTT-CGATGTGGTTG----ATGGATGCATGTCTGG---------------CGATTCTT---GCAGCCATGCGTCTGCGCGTCCACCGGTGGACTCGTCGATACCGTCATCGAAGGCAAGACCGGGTTCCACATGGG-CCGCCTCAGCGTCGACGTAAGG-AGGATAGCT--AGCTCTTACATACCCT--GCCCTGCC---ATGGATGGTTTTC-----TACATACATGT---ATGAATCTGAATCAGC-----AAAGTGATACTTGTGT-CGTCGTCCT-TTCTTCATCCCCAGTGCAACGTCGTGGAGCCGGCCGACGTCAAG-AAGGTGGCGACCACCGTGAAGCGCGCGATCAAGGTGGTGGGCACGCCGGCGTACGAGGAGATGGTCAAGAACTGCATGATCCAGGACCTCTCCTGGAAGGTAC----T-CCAGTATAG-----TCCCCCGTCAGAGCACA----GAGCAG---CACCAA-----------------GATCGATCGATC-A-CACACACGC----GTCTC-GCTCGCTCCGAT---CGTGTTGCTGATTGTGGTGCTAA-TTTATT-------GTTTGC-AAAA----TGT----TGCAGGGTCCTGCCAAGAACTGGGAGAACAAGG Cleistachne_sorghoides_A2_Reekmans12070 ATCGTCACGGCATGGACGTCAGCGAGTGGGATCCCAGCAAGGACAAGTACATCGCCGTCAAATACGACGTGTCAACGGTGAGC----GATC----GACCTTTGCCAA------TTTGTTGCCAGTCTGCTCA-----------------TGTA----T-ATC-TT-CCAGG------CGTTGG-TTCTGA---GTGCAA-----CGA-------TGCC----CGTT--TCAGGCCGTGGAGGCGAAGGCACAGAACAAGGAGGCGCTGCAGGCGGAGGTCGGCCTCCCGGTTGACAGGAAGATCCCGCTGGTGGCGTTCATCGGCAGGCTGGAGGAGCAGAAGGGCCCCGACGTCATGGCGGCCGCCATCCCGGAGCTCATGGAGGAGGACGTGCAGATCGTGCTGCTGGTACGTACGATACTACGCTGCCGCCCGGCTACT---ACGACATGCAT------AGTGTTACGGGC----ATCAGCAGGACAATGATG-TGGTT--GAT-CTGACTGAT-----------------------------CGATGC-TGCG-GTTC-GTGC-AGGGCACGGGCAAGAAGAAGTCCGAGCGCATGCTGATGAGCGCCGAGGGGAAGTACCCGGACAAGGTGCGCGCCGTGGTAAAGTTCAACGCGGCGCTGGCGCACCACATCATGGCCGGCGCCGACCTGCTCGCCGTCACCAGCCGCTTCGAGCCCTGCGGCCTCATCCAGCTCCAGGGGATGCGATACGGAACGGTACGACAC-----GAGCATTGC------AGCTAGCAGAAACTA----------CCCTC----------TGAA---------------------TG-TTTACGATGTGAAAATGTGATAGA----TCTCTGG---------------CGATTCTTCTTGCAGCCCTGCGCCTGCGCGTCCACCGGTGGACTCGTCGACACCATCATCGAAGGCAAGACCGGGTTCCACATGGG-CCGCCTCAACGTCGACGTACG--------GCT--ACCTCGATCTTACCCTGCGCCCTGC----------------------------CATGTATGGTGAATCTGAATCAGCAAATTAAAGCAATTCTTGTTTTCGTCCT----TTCGTTCTTCCCAGTGCAACGTCGTGGAGCCGGCGGACGTCAAG-AAGGTGGCGACCACGGTGAAGCGCGCCATCAAGGTGGTGGGCACACCGGCGTACGAGGAGATGGTCAAGAACTGCATGATCCAGGATCTCTCCTGGAAGGTAC---GT-ACAGTACAG-----TCCCCCGTCAGAGCACAGATCAGAGA----------TT--CAGAGCAC----C-AT-GATCG-TCGATCACT--CGC----GTCTCAGCTCGCTCCT-----GTTGCTGATTGTGGTGG-------TTT----------ATTTGC-AAATTA-TTG--CA-TGCAGGGTCCTGCCAAGAACTGGGAGAACAAGG Cleistachne_sorghoides_A1_Jackson_sn ATCGTCACGGCATGGACGTCAGCGAGTGGGATCCCAGCAAGGACAAGTACATCGCCGTCAAATACGACGTGTCAACGGTGAGC----GATC----GACCTTTGCCAA------TTTGTTGCTAGTCTGCTCA-----------------TGTA----T-ATC-TT-CCAGG------CGTTGG-TTCTGA---GTGCAA-----CGA-------TGCC----CGTT--TCAGGCCGTGGAGGCGAAGGCACTGAACAAGGAGGCGCTGCAGGCGGAGGTCGGCCTCCCGGTTGACAGGAAGATCCCGCTGGTGGCGTTCATCGGCAGGCTGGAGGAGCAGAAGGGCCCCGACGTCGTGGCGGCCGCCATCCCGGAGCTCATGGAGGAGGACGTGCAGATCGTGCTGCTGGTACGTACGATACTACGCTGCCGCCCGGCTACT---ACGACATGCAT------AGTGTTACGGGC----ATCAGCAGGACAATGATG-TGGTT--GAT-CTGACTGAT-----------------------------CGATGC-TGCG-GTTC-GTGC-AGGGCACGGGCAAGAAGAAGTTCGAGCGCATGCTGATGAGCGCCGAGGAGAAGTACCCGGACAAGGTGCGCGCCGTGGTAAAGTTCAACGCGGCGCTGGCGCACCACATCATGGCCGGCGCCGACCTGCTCGCCGTCACCAGCCGCTTCGAGCCCTGCGGCCTCATCCAGCTCCAGGGGATGCGATACGGAACGGTACGACAC-----GAGCATTGC------AGCTAGCAGAAACTA----------CCCTC----------TGAA---------------------TG-TTTACGATGTGAAAATGTGATAGA----TCTCTGG---------------CGATTCTTCTTGCAGCCCTGCGCCTGCGCGTCCACCGGTGGACTCGTCGACACCATCATCGAAGGCAAGACCGGGTTCCACATGGG-CCGCCTCAACGTCGACGTACG--------GCT--ACCTCGATCTTACCCTGCGCCCTGC----------------------------CATGTATGGTGAATCTGAATCAGCAAATTAAAGCAATTCTTGTTTTCGTCCT----TTCGTTCTTCCCAGTGCAACGTCGTGGAGCCGGCGGACGTCAAG-AAGGTGGCGACCACGGTGAAGCGCGCCATCAAGGTGGTGGGCACACCGGCGTACGAGGAGATGGTCAAGAACTGCATGATCCAGGATCTCTCCTGGAAGGTAC---GT-ACAGTACAG-----TCCCCCGTCAGAGCACAGATCAGAGA----------TT--CAGAGCAC----C-ATGAT-CG-TCGATCACT--CGC----GTCTCAGCTCGCTCCT-----GTTGCTGATTGTGGTGG-------TTT----------ATTTGC-AAATTA-TTG--CA-TGCAGGGTCCTGCCAAGAACTGGGAGAACAAGG Sorghastrum_nutans_1_Liu245 ATCGTCACGGCATGGACGTCAGCGAGTGGGATCCCAGCAAGGACAAGTACATCGCCGTCAAATACGACGTGTCAACGGTGAGC----GATC----GACCTTTGCCAA------CTTGCTGCTAGTCTGCTCA-----------------TGTA----T-GTC-TT-CCAGG------CGCTGG-TTCTGA---GTGCAA-----CGA-------TGCC----CGTT--TCAGGCCGTGGAGGCGAAGGCACTGAACAAGGAGGCGCTGCAGGCGGAGGTCGGCCTCCCGGTTGACAGGAAGATCCCGCTGGTGGCGTTCATCGGCAGGCTGGAGGAGCAGAAGGGCCCCGACGTCATGGCGGCCGCCATCCCGGAGCTCATGGAGGAGGACGTGCAAATCGTGCTGCTGGTACG-ATGCTACGCCGCCGCCGTCCGGCTACTACGACGACATGCAT------AGTGTTACCGGC----ATCAGCAGGACAATGATG-TGGTT--GAT-CTGACTGAT-----------------------------CGATGC-TGCG-GTTC-TTGCAAGGGCACGGGCAAGAAGAAGTTCGAGCGCATGCTGATGAGCGCCGAGGAGAAGTACCCGGACAAGGTGCGCGCCGTGGTGAAGTTCAACGCGGCGCTGGCGCACCACATCATGGCCGGCGCCGACCTGCTCGCCGTCACCAGCCGCTTCGAGCCCTGCGGCCTCATCCAGCTCCAGGGGATGCGATACGGAACGGTACGACAC-----GAGCATTGT---TGCAGCTAGCAGAAACCA----------CCCTC----------TGAA---------------------TG-TTTTCGATGTGAAAATGTGATAGA----TCTCTGG---------------CGATTCTTCTTGCAGCCCTGCGCCTGCGCGTCCACCGGTGGACTCGTCGACACCATCATCGAAGGCAAGACCGGGTTCCACATGGG-CCGCCTCAGCGTCGACGTACG--------GCT--ACCTCGATCTTACCCT--GCCCTGCC-------ATGTTTTTT-------CCCACATGTATGATGAATCTGAATCAGCAAATTAAAGCAATTCTTGTTTTCGTCCT----TTCGTTCTTCCCAGTGCAACGTCGTGGAGCCGGCGGACGTCAAG-AAGGTGGCGACCACCGTGAAGCGCGCCATCAAGGTGGTGGGCACGCCGGCGTACGAGGAGATGGTCAAGAACTGCATGATCCAGGATCTGTCCTGGAAGGTAC---GT-ACAGTACAGTACAGTCCCCCGTCAGAGCACTGATCAGAGA----------TT--CAGAGCAC----C-AT-GATCG-TCGATCACT--CGC----GTCTCAGCTCGCTCCT-----GTTGCTGATTGTGGTGG-------TTT----------ATTTGC-AAAATA-TTG--CA-TGCAGGGTCCTGCCAAGAACTGGGAGAACAAGG Sorghastrum_nutans_2_Liu246 ATCGTCACGGCATGGACGTCAGCGAGTGGGATCCCAGCAAGGACAAGTACATCGCCGTCAAATACGACGTGTCAACGGTGAGC----GATC----GACCTTTGCCAA------CTTGTTGCTAGTCTGCTCA-----------------TGTA----T-GTC-TT-CCAGG------CGCTGG-TTCTGA---GTGCAA-----CGA-------TGCC----CGTT--TCAGGCCGTGGAGGCGAAGGCACTGAACAAGGAGGCGCTGCAGGCGGAGGTCGGCCTCCCGGTTGACAGGAAGATCCCGCTGGTGGCGTTCATCGGCAGGCTGGAGGAGCAGAAGGGCCCCGACGTCATGGCGGCCGCCATCCCGGAGCTCATGGAGGAGGACGTGCAGATCGTGCTGCTGGTACG-ATGCTACGCCGCCGCCGTCCGGCTACTACGACGACATGCAT------AGTGTTACCGGC----ATCAGCAGGACAATGATG-TGGTT--GAT-CTGACTGAT-----------------------------CGATGC-TGCG-GTTC-TTGCAAGGGCACGGGCAAGAAGAAGTTCGAGCGCATGCTGATGAGCGCCGAGGAGAAGTACCCGGACAAGGTGCGCGCCGTGGTGAAGTTCAACGCGGCGCTGGCGCACCACATCATGGCCGGCGCCGACCTGCTCGCCGTCACCAGCCGCTTCGAGCCCTGCGGCCTCATCCAGCTCCAGGGGATGCGATACGGAACGGTACGACAC-----GAGCATTGT---TGCAGCTAGCAGAAACCA----------CCCTC----------TGAA---------------------TG-TTTTCGATGTGAAAATGTGATAGA----TCTCTGG---------------CGATTCTTCTTGCAGCCCTGCGCCTGCGCGTCCACCGGTGGACTCGTCGACACCATCATCGAAGGCAAGACCGGGTTCCACATGGG-CCGCCTCAGCGTCGACGTACG--------GCT--ACCTCGATCTTACCCT--GCCCTGCC-------ATGTTTTTT-------CCCACATGTATGATGAATCTGAATCAGCAAATTAAAGCAATTCTTGTTTTCGTCCT----TTCGTTCTTCCCAGTGCAACGTCGTGGAGCCGGCGGACGTCAAG-AAGGTGGCGACCACCGTGAAGCGCGCCATCAAGGTGGTGGGCACGCCGGCGTACGAGGAGATGGTCAAGAACTGCATGATCCAGGATCTGTCCTGGAAGGTAC---GT-ACAGTACAGTACAGTCCCCCGTCAGAGCACTGATCAGAGA----------TT--CAGAGCAC----C-AT-GATCG-TCGATCACT--CGC----GTCTCAGCTCGCTCCT-----GTTGCTGATTGTGGTGG-------TTT----------ATTTGC-AAAATA-TTG--CA-TGCAGGGTCCTGCCAAGAACTGGGAGAACAAGG Microstegium_vimineum_3_Liu251 ATCGTCACGGCATGGACGTCAGCGAGTGGGACCCAAGCAAGGACAAGTACATCGCCGTCAGATACGACGTGTCAACGGTGACCGCGC------------TCTGACAA-----TTCGTTCGTTGTGCTAGTCTGCTCA---------TCGTG-AAAA----TC-TT-CCAGG------TGTTGG-TTCTGATCAGTGCAAGTGTGCAA---CG-ATGTT----CGTT--TCAGGCCATGGAGGCGAAGGCTCTGAACAAGGAGGCCCTGCAGGCTGAGGTGGGCCTTCCCGTGGACCGGAAGATCCCGCTGGTGGCGTTCATCGGCAGGCTGGAGGAGCAGAAGGGCCCCGACGTCATGGCGGCCGCCATCCCGGAGCTCATGGACGAGGACGTGCAGATCGTCCTGCTGGTACG----------------------------------ATATATA-----GTAGTGCT-------------------------------GTTATGAC-GTGACTGGTGTGAAGTGAGGATCGTCGAACACGTACTATGATCGATGCATTTGC-CTGC-AGGGCACGGGCAAGAAGAAGTTCGAGCGCATGCTGATGAGCGCGGAGGAGAAGTACCCGGACAAGGTGCGCGCCGTGGTGAAATTCAACGCGGCGCTGGCGCACCACATCATGGCCGGCGCCGACGTGCTAGCCGTCACCAGCCGATTCGAGCCATGCGGACTCATCCAGCTCCAGGGGATGCGATATGGAACGGTATATATAT----CAGCACTGC---TGCAGCTAGCAGAAACCTGAA---------CTC----------TGAA-----------------TGCATGGTTT-CGATGTGATTGATGGTCTCA----TCTCTGGTGGATGTCGATCTCGCGATTGTT---GCAGCCCTGCGCCTGTGCGTCCACCGGCGGACTCGTCGACACCATCATCGAAGGCAAGACCGGGTTCCACATGGG-CCGCCTCAGCGTCGACGTAAG--------GCTACTAGCAGCTCTCACCT---GCCCTTCC-------ATGGTTTTTCTTCTGAAATGTA-------TGAATCAGAAAAGTGA-----------TTCTTGTCT-CGTCCTC--TTTCTTCTTCGC-AGTGCAACGTGGTGGAGCCGGCGGACGTGAAG-AAGGTGGCGACCACGGTGAGACGCGCCATCAAGGTGGTGGGCACGCCGGCGTACGAGGAGATGGTCAAGAACTGCATGATCCAGGATCTCTCCTGGAAGGTA-------ATAATAC--TA---GACGCTGACAGAGCA------GAGCA------CCAAT-AAC------------GATCAGATTCAG----ACACACGC----GTCTC-GCTCGCTCCT-----GTCTCTGACGACGATCGTGTGG--TTT----------GTTTACGAAA-TAATTGTTAA-TGCAGGGCCCTGCCAAGAACTGGGAGAACAAGG Microstegium_vimineum_4_Liu251_2 ATCGTCACGGCATGGACGTCAGCGAGTGGGACCCAAGCAAGGACAAGTACATCGCCGTCAAATACGACGTGTCAACGGTGACCGCGC------------TCTGACAA-----TTCGTTCGTTGTGCTAGTCTGCTCA---------TCGTG-AAAA----TC-TT-CCAGG------TGTTGG-TTCTGATCAGTGCAAGTGTGCAA---CG-ATGTT----CGTT--TCAGGCCATGGAGGCGAAGGCTCTGAACAAGGAGGCCCTGCAGGCTGAGGTGGGCCTTCCCGTGGACCGGAAGATCCCGCTGGTGGCGTTCATCGGCAGGCTGGAGGAGCAGAAGGGCCCCGACGTCATGGCGGCCGCCATCCCGGAGCTCATGGACGAGGACGTGCAGATCGTCCTGCTGGTACG----------------------------------ATATATA-----GTAGTGCT-------------------------------GTTATGAC-GTGACTGGTGTGAAGTGAGGATCGTCGAACACGTACTATGATCGATGCATTTGC-CTGC-AGGGCACGGGCAAGAAGAAGTTCGAGCGCATGCTGATGAGCGCGGAGGAGAAGTACCCGGACAAGGTGCGCGCCGTGGTGAAATTCAACGCGGCGCTGGCGCACCACATCATGGCCGGCGCCGACGTGCTCGCCGTCACCAGCCGATTCGAGCCATGCGGACTCATCCAGCTCCAGGGGATGCGATATGGAACGGTATATATAT----CAGCACTGC---TGCAGCTAGCAGAAACCTGAA---------CTC----------TGAA-----------------TGCATGGTTT-CGATGTGATTGATGGTCTCA----TCTCTGGTGGATGTCGATCTCGCGATTGTT---GCAGCCCTGCGCCTGTGCGTCCACCGGCGGACTCGTCGACACCATCATCGAAGGCAAGACCGGGTTCCAAATGGG-CCGCCTCAGCGTCGACGTAAGGCTTGCTTGCT---CTTACCCTGG-CTTGCCAATCTGCC-------ATGTTTTTTGTTCTGTATGCAAGAATGAATGAATCAGCAAAGCGA-----------TTCTTGTTT-CGTCCT----TTCTTCTTCTC-AGTGCAACGTGGTGGAGCCGGCGGACGTCAAG-AAGGTGGCGACAACCGTGAGACGCGCCATCAAGGTGGTGGGCACGCCGGCGTACGAGGAGATGGTCAAGAACTGCATGATCCAGGATCTCTCCTGGAAGGTA-------ATAATAC--TA---GACGCTGTCAGAGCA------GAGCA------CCAATTAA-------------GAACGATCAG------ACACACGC----GTCTC-GCTCGCTCCT-----GTCTCTGACGACGATCGTGTGG--TTT----------GTTTGCCAAA-TAATTGTTAAATGCAGGGCCCTGCCAAGAACTGGGAGAACAAGG Microstegium_vimineum_1_Liu251 ATCGTCACGGCATGGACGTTAGCGAGTGGGACCCCAGCAAGGACAAGTACATCGCCGTCAAATACGACGTGTCAACGGTGACC----------------TCTCCGAG------CT-TTTCCTG----AG----CTC----------TCC-G-AACGG---------CAA---------------GTGTGCA---CGCAACGAT--GATGTCCGTTT------CGTT--TCAGGCCATGGAGGCGAAGGCGCTGAACAAGGAGGCCCTGCAGGCGGAGGTGGGCCTCCCGGTGGACCGGAACATCCCGCTGGTGGCGTTCATCGGCAGGCTGGAGGAGCAGAAGGGTCCCGACGTCATGGCCGCCGCCATCCCGGAGCTCATGGAGGAGGACGTGCAGATCGTCCTGCTGGTACG----------------------------------ATATATA-----GTAGTGCT-------------------GTTATG----AGTTTATGAC-CTGACTGGTGTGAAGTGAGGATCGTCGAACACG---TATGATCGATGCATTTGC-CTGC-AGGGCACGGGCAAGAAGAAGTTCGAGCGCATGCTGATGAGCGCGGAGGAGAAGTACCCGGACAAGGTGCGCGCTGTGGTGAAATTCAACGCGGCGCTGGCGCACCACATCATGGCCGGCGCCGACGTGCTCGCCGTCACCAGCCGATTCGAGCCGTGCGGACTCATCCAGCTCCAGGGGATGCGATACGGGACGGTATGTATATACATGAGCACTGCTGCTGCAGCTAGCAGAAACAACCA----------TC----------TGAA--------------AAATGCATCGTTT-CTATGTGATTGATGAATAATGGTGTCTTGTGAATGGT----------GATTCTT---GCAGCCGTGCGCCTGCGCGTCCACCGGTGGACTCGTCGACACCATCATCGAAGGCAAGACCGGGTTCCACATGGG-CCGCCTCAGCGTCGACGTAAG--------GCTACTAGCAGCTCTCACC-T--GCCCTTCC-------ATGGTTTTTCTTCTGAAATGTA-------TGAATCAGAAAAGTGA-----------TTCTTGTCT-CGTCCTC--TTTCTTCTTCGC-AGTGCAACGTGGTGGAGCCGGCGGACGTGAAG-AAGGTGGCGACCACGGTGAGACGCGCCATCAAGGTGGTGGGCACGCCGGCGTACGAGGAGATGGTCAAGAACTGCATGATCCAGGATCTCTCCTGGAAGGTA-------ATAATAC--TA---GACGCTGACAGAGCA------GAGCA------CCAAT-AAC------------GATCAGATTCAG----ACACACGC----GTCTC-GCTCGCTCCT-----GTCTCTGACGACGATCGTGTGG--TTT----------GTTTACGAAA-TAACTGTTAA-TGCAGGGCCCTGCCAAGAACTGGGAGAACAAGG Microstegium_vimineum_2_Liu251 ATCGTCACGGCATGGACGTCAGCGAGTGGGACCCCAGCAAGGACAAGTACATCGCCGTCAAATACGACGTGTCAACGGTGACC----------------TCTCCGAG------CT-TTTCCTG----AG----CTC----------TCC-G-AACGG---------CAA---------------GTGTGCA---CGCAACGAT--GATGTCCGTTT------CGTT--TCAGGCCATGGAGGCGAAGGCGCTGAACAAGGAGGCCCTGCAGGCGGAGGTGGGCCTCCCGGTGGACCGGAACATCCCGCTGGTGGCGTTCATCGGCAGGCTGGAGGAGCAGAAGGGTCCCGACGTCATGGCCGCCGCCATCCCGGAGCTCATGGAGGAGGACGTGCAGATCGTCCTGCTGGTACG----------------------------------ATATATA-----GTAGTGCT-------------------GTTATG----AGTTTATGAC-CTGACTGGTGTGAAGTGAGGATCGTCGAACACG---TATGATCGATGCATTTGC-CTGC-AGGGCACGGGCAAGAAGAAGTTCGAGCGCATGCTGATGAGCGCGGAGGAGAAGTACCCGGACAAGGTGCGCGCCGTGGTGAAATTCAACGCGGCGCTGGCGCACCACATCATGGCCGGCGCCGACGTGCTCGCCGTCACCAGCCGATTCGAGCCGTGCGGACTCATCCAGCTCCAGGGGATGCGATACGGGACGGTATGTATATACATGAGCACTGCTGCTGCAGCTAGCAGAAACAACCA----------TC----------TGAA--------------AAATGCATCGTTT-CTATGTGATTGATGAATAATGGTGTCTTGTGAATGGT----------GATTCTT---GCAGCCGTGCGCCTGCGCGTCCACCGGTGGACTCGTCGACACCATCATCGAAGGCAAGACCGGGTTCCACATGGG-CCGCCTCAGCGTCGACGTAAG--------GCTACTAGCAGCTCTCACC-T--GCCCTTCC-------ATGGTTTTTCTTCTGAAATGTA-------TGAATCAGAAAAGTGA-----------TTCTTGTCT-CGTCCTC--TTTCTTCTTCGC-AGTGCAACGTGGTGGAGCCGGCGGACGCGAAG-AAGGTGGCGACCGCGGTGAGACGCGCCATCAAGGTGGTGGGCACGCCGGCGTACGAGGAGATGGTCAAGAACTGCATGATCCAGGATCTCTCCTGGAAGGTA-------ATAATAC--TA---GACGCTGACAGAGCA------GAGCA------CCAAT-AAC------------GATCAGATTCAG----ACACACGC----GTCTC-GCTCGCTCCT-----GTCTCTGACGACGATCGTGTGG--TTT----------GTTTACGAAA-TAATTGTTAA-TGCAGGGCCCTGCCAAGAACTGGGAGAACAAGG ; END; BEGIN ASSUMPTIONS; TYPESET * UNTITLED = unord: 1 - 1501; END; BEGIN TREES; Title 'Trees from "waxy0402.nex.best.tre"'; LINK Taxa = Taxa; TRANSLATE 1 Sorghum_matarankense_2_Perry2691_3, 2 Sorghum_matarankense_1_Perry2691_5, 3 Sorghum_interjectum_1_Perry612, 4 Sorghum_intrans_1_CelarierA2785I, 5 Sorghum_plumosum_1_Peterson14419_2, 6 Sorghum_plumosum_2_Peterson14419_2, 7 Sorghum_plumosum_3_Peterson14419, 8 Sorghum_sudanense_1_Zhao120, 9 Sorghum_sudanense_2_Zhao120, 10 Sorghum_halepense_4_Liu235, 11 Sorghum_halepense_3_Liu235, 12 Sorghum_halepense_2_Liu235_3, 13 Sorghum_halepense_1_Liu234_2, 14 Sorghum_stipoideum_3_Liu242, 15 Sorghum_stipoideum_1_Fryxell_Craven4025_2, 16 Sorghum_stipoideum_2_Liu242, 17 Sorghum_stipoideum_4_Liu242_3, 18 Sorghum_angustum_2_Specht774, 19 Sorghum_angustum_3_Specht774_2, 20 Sorghum_angustum_1_Blake18599, 21 Sorghum_timorense_2_Lazarides5027_2, 22 Sorghum_timorense_1_Lazarides5021_2, 23 Sorghum_exstans_1_Hartley239, 24 Sorghum_grande_1_Hacker830_2, 25 Sorghum_grande_2_Hacker830, 26 Sorghum_grande_3_Hacker830, 27 Sorghum_grande_4_Hacker830, 28 Sorghum_leiocladum_4_Purdie8329_6, 29 Sorghum_grande_5_Hacker830, 30 Sorghum_grande_6_Hacker830, 31 Sorghum_grande_7_Hacker830, 32 Sorghum_grande_8_Hacker830, 33 Sorghum_leiocladum_3_Miller35_2, 34 Sorghum_leiocladum_2_Miller35, 35 Sorghum_leiocladum_1_Miller35, 36 Sorghum_nitidum_1_Clemens_sn_4, 37 Sorghum_brachypodum_2_Cowie8981, 38 Sorghum_brachypodum_1_Specht1260, 39 Sorghum_amplum_1_Fryxell_Craven4011, 40 Sorghum_propinquum_1_Liu233, 41 Sorghum_drummondii_1_Liu238, 42 Sorghum_drummondii_2_Liu239, 43 Sorghum_bicolor_3_Liu231, 44 Sorghum_bicolor_1_Liu229, 45 Sorghum_bicolor_2_Liu230, 46 Sorghum_versicolor_2_Godfrey1666_2, 47 Sorghum_versicolor_1_Godfrey1666, 48 Sorghum_miliaceum_1_Chut1012, 49 Sorghum_miliaceum_2_Clayton5790, 50 Sorghum_miliaceum_3_Clayton5790, 51 Sorghum_virgatum_1_Silveus2770, 52 Sorghum_arundinaceum_1_Liu232, 53 Sorghum_almum_1_Liu236_2, 54 Sorghum_almum_2_Liu237_2, 55 Sorghum_macrospermum_1_Adams889, 56 Sorghum_macrospermum_2_Adams889, 57 Sorghum_macrospermum_3_Adams889_3, 58 Sorghum_laxiflorum_2_Hartley245, 59 Sorghum_laxiflorum_1_Liu244_2, 60 Bothriochloa_bladhii_1_Liu250_2, 61 Dichanthium_annulatum_1_Liu248_2, 62 Dichanthium_annulatum_2_Liu256, 63 Dichanthium_annulatum_3_Liu256, 64 Chrysopogon_serrulatus_2_Liu255, 65 Chrysopogon_serrulatus_3_Santos6311_3, 66 Chrysopogon_serrulatus_1_Liu255_4, 67 Cleistachne_sorghoides_B1_Jackson_sn, 68 Cleistachne_sorghoides_B2_Reekmans12070, 69 Cleistachne_sorghoides_A2_Reekmans12070, 70 Cleistachne_sorghoides_A1_Jackson_sn, 71 Sorghastrum_nutans_1_Liu245, 72 Sorghastrum_nutans_2_Liu246, 73 Microstegium_vimineum_3_Liu251, 74 Microstegium_vimineum_4_Liu251_2, 75 Microstegium_vimineum_1_Liu251, 76 Microstegium_vimineum_2_Liu251; TREE bestREP2 = (1:0.00805642,(2:0.00307426,(4:0.0070087,((((24:0.00318471,(25:0.00320753,(27:0.00395071,(26:1.0E-8,28:1.0E-8):9.8582E-4):1.0E-8):1.0E-8):0.00443522,30:0.00322287):0.00467979,((19:1.0E-8,(20:0.00710211,18:0.01018666):1.0E-8):0.00707197,(23:0.00410525,(38:0.16832033,39:0.12604819):0.13290253):1.0E-8):1.0E-8):0.00104633,((21:0.00602707,22:1.0E-8):0.00301143,(((17:0.00309355,(15:0.00309457,14:0.01146071):1.0E-8):1.0E-8,16:0.00620859):0.0041617,((((((((64:1.0E-8,66:0.0339263):0.02673557,65:0.01445086):0.04941745,(((75:0.00283519,76:0.00194919):0.0458661,(73:0.00174144,74:0.03922402):0.03048762):0.1505956,((69:0.0037677,70:0.00284278):0.01276996,(71:0.00181852,72:1.0E-8):0.00880873):0.0426638):0.02277761):0.01474101,(67:0.01280613,68:0.02097386):0.05309169):0.01601426,((61:0.0207927,(62:0.00553952,63:0.00625735):0.02211598):0.08694295,60:0.03850421):0.01575997):0.12449465,((59:0.00314047,58:0.00207377):0.00867851,((57:1.0E-8,56:0.00206165):0.00373477,55:0.00564144):0.01225265):0.04269866):0.02047892,(((42:1.0E-8,(41:1.0E-8,(48:0.00221805,(40:1.0E-8,(52:1.0E-8,(53:1.0E-8,(((43:1.0E-8,45:1.0E-8):1.0E-8,54:1.0E-8):1.0E-8,44:0.00219426):1.0E-8):1.0E-8):0.00329141):1.0E-8):1.0E-8):1.0E-8):1.0E-8,((46:1.0E-8,50:1.0E-8):0.00521272,((34:0.00622116,(35:0.00829578,(33:0.00105987,((((10:0.00199467,11:0.00399369):3.3344E-4,12:0.00565678):0.01793602,13:0.00335733):0.02505065,(9:0.00415105,8:0.01470473):0.00533928):0.02508704):0.00106747):1.0E-8):0.04606104,(49:1.0E-8,47:1.0E-8):0.0041218):1.0E-8):1.0E-8):4.0454E-4,51:0.00583301):0.08993114):0.12971386,36:0.01654139):0.0135031):0.00132662):1.0E-8):0.02103517):1.0E-8):1.0E-8,((3:0.00400115,((((32:9.9502E-4,37:0.06586892):1.0E-8,29:0.00108001):0.00208639,(5:0.00197789,6:0.01496763):0.02732956):1.0E-8,31:0.00432404):0.00528306):0.00205557,7:0.00431196):0.00102395); END; BEGIN CODONS; CODESET * UNTITLED = universal: 1 - 1501; END; BEGIN MESQUITECHARMODELS; ProbModelSet * UNTITLED = 'Jukes-Cantor': 1 - 1501; END; Begin MESQUITE; MESQUITESCRIPTVERSION 2; TITLE AUTO; tell ProjectCoordinator; timeSaved 1397097009008; getEmployee #mesquite.minimal.ManageTaxa.ManageTaxa; tell It; setID 0 8303011842954115123; endTell; getEmployee #mesquite.charMatrices.ManageCharacters.ManageCharacters; tell It; setID 0 7601910100202051756; mqVersion 275; checksumv 0 3 2674085565 null getNumChars 1501 numChars 1501 getNumTaxa 76 numTaxa 76 short true bits 15 states 15 sumSquaresStatesOnly 1636185.0 sumSquares 1636185.0 longCompressibleToShort false usingShortMatrix true NumFiles 1 NumMatrices 1; mqVersion; endTell; getWindow; tell It; suppress; setResourcesState true false 100; setPopoutState 400; setExplanationSize 0; setAnnotationSize 0; setFontIncAnnot 0; setFontIncExp 0; setSize 700 464; setLocation 8 8; setFont SanSerif; setFontSize 10; getToolPalette; tell It; endTell; setActive; desuppress; endTell; endTell; end;