#NEXUS BEGIN TAXA; TITLE Taxa; DIMENSIONS NTAX=35; TAXLABELS Clavaria_acuta_F14294_AY228353 Clavaria_argillacea_BRACR16025_KC759439 Clavaria_argillacea_KM126733_KC759438 Clavaria_asterospora_BIO12390_AY759440 Clavaria_californica_TENN026785_HQ179660 Clavaria_citrinorubra_TENN040464_HQ179661 Clavaria_crosslandii_BIO12762_KC759441 Clavaria_falcata_AB0532_KC759445 Clavaria_falcata_CF32637_KC759442 Clavaria_falcata_GC08101406_KC759446 Clavaria_falcata_O73640_GU234148 Clavaria_falcata_OJ572007_KC759447 Clavaria_falcata_SAV2011_KC759443 Clavaria_flavipes_BRACR12807_KC759449 Clavaria_flavipes_BRACR12809_KC759448 Clavaria_flavipes_BRACR15121_KC759450 Clavaria_flavipes_OJ362006_KC759451 Clavaria_flavostellifera_BIO10433_KC759461 Clavaria_flavostellifera_BRA16080_KC759463 Clavaria_flavostellifera_BRACR15924_KC759466 Clavaria_flavostellifera_BRACR16695_KC759462 Clavaria_flavostellifera_MA40230_KC759463 Clavaria_flavostellifera_SAV1992_KC759465 Clavaria_incarnata_BIO12560_KC759452 Clavaria_incarnata_MA53113_KC759453 Clavaria_sp_BRACR16032_KC759467 Clavaria_sphagnicola_BRACR13593_KC759455 Clavaria_sphagnicola_BRNM747282_KC759456 Clavaria_sphagnicola_OJ362006_KC759454 Clavaria_tenuipes_BRACR16026_KC759460 Clavaria_tenuipes_GC06110101_KC759458 Clavaria_tenuipes_KM146565_KC759457 Clavaria_tenuipes_OJ82003_KC759444 Clavaria_tenuipes_SAV2003_KC759459 Clavaria_zollingeri_TENN58652_AY854071 ; END; BEGIN CHARACTERS; TITLE Clavaria_subgen._Holocoryne_ITS_alignment; DIMENSIONS NCHAR=811; FORMAT DATATYPE = DNA GAP = - MISSING = ?; MATRIX Clavaria_acuta_F14294_AY228353 ???????????????????????????????????????????????????????attattgattt----aaa---gatg-tgctggcatttctt--caca-gg---tttgcat--gtgcactct--aaaatctccttctcttacccca---ttgtgcacac-tccagtaggc------------------------------------tttgtctatgctttt--a-ccaaaca-ccaa----taac----a-tgtca-gaatgatct-atgt--agtaagctttaaat--aag-ctg----aaatctaatacaactttcaacaatggatctcttggttctcgcatcgatgaagaacgcagcgaattgcgatatgtaatgtgaattgcagaattcagtgaatcatcgaatctttgaacgcaccttgcaccctctgg---cattccggagggtatgcctgtttgagtgtcatt-aatctctcaacacaagaaattt------------gc-ttcttgt-g-cttggacattgaaggttt-tgctggWgc-aacaact-gtcagctccttttaaatgcattagcaaggca--gtgt-tagga----------ct-agcctcagtttgataag--------tttttatct--a--tgctgtcgctgggt-t----t-cctctttatg--ctttgcttaaaattgtcttt------ggactgcctgtc-----aaggcaataa-c-a--t-ccttatt-ga---tcgacctcaaatcaggtaggactacccgctgaacttaagcatatcaataa Clavaria_argillacea_BRACR16025_KC759439 agagg-aagtaaaagtc-gtaacaaggtttccgtaggtgaacctgcggaaggatcattatcaattttt--aaa---gatg-tgctggcactcctt--cact-gg---tttgcat--gtgcactctacaaaatctccttctcttaccccac---tgtgcacac-tcaagtagac------------------------------------tttgtctatgttttt--a-tcaaaca-ccaa----taaca---a-tttca-gaatgatct-ac----agtaagcttttgac--aag-ctg----aaatctaatacaactttcaacaatggatctcttggttctcgcatcgatgaagaacgcagcgaattgcgatatgtaatgtgaattgcagaattcagtgaatcatcgaatctttgaacgcaccttgcaccctctgg---tattccggagggtatgcctgtttgagtgtcatt-aatctctcaacacaagaaaatt-----------tg---tcttgt-g-cttggatattgaaggttt-tgctggtgcaaacaact-gccagctccttttaaatgtattagcagagca--gtg--tagga----------ct-ggcctcggtttgataag-aaac-----tttatct--a--tgctgtcgctgggt-t----t-cctctttgtg--ctcagcttcaaattgtcttc------ggactgtctctt-----gaggcaa----caaa-t-ctctatt-ga---tcgacctcaaatcaggtaggactacccgctgaacttaagcatatcaataa Clavaria_argillacea_KM126733_KC759438 ???????agtaaaagtc-gtaacaaggtttccgtaggtgaacctgcggaaggatcattatcaattttt--aaa---gatg-tgctggcactcctt--cact-gg---tttgcat--gtgcactctacaaaatctccttctcttaccccac---tgtgcacac-tcaagtagac------------------------------------tttgtctatgttttt--a-tcaaaca-ccaa----taaca---a-tttca-gaatgatct-ac----agtaagcttttgac--aag-ctg----aaatctaatacaactttcaacaatggatctcttggttctcgcatcgatgaagaacgcagcgaattgcgatatgtaatgtgaattgcagaattcagtgaatcatcgaatctttgaacgcaccttgcaccctctgg---tattccggagggtatgcctgtttgagtgtcatt-aatctctcaacacaagaaaatt-----------tg---tcttgt-g-cttggatattgaaggttt-tgctggtgcaaacaact-gccagctccttttaaatgtattagcagagca--gtg--tagga----------ct-ggcctcggtttgataag-aaac-----tttatct--a--tgctgtcgctgggt-t----t-cctctttgtg--ctcagcttcaaattgtcttc------ggactgtctctt-----gaggcaa----caaa-t-ctctatt-ga---tcgacctcaaatcaggtaggactacccgctgaacttaagcatatcaataa Clavaria_asterospora_BIO12390_AY759440 agagg-aagtaaaagtc-gtaacaaggtttccgtaggtgaacctgcggaaggatcattatcgattcttt-ga---ggatg-tgctggcttcttgttt--ga-g-aa----gcaattgtgcactctg-aaaacc-----acttcattc-acc--tgtgcaccc-cattgtagac------------------------------------tttgtctatgattttttaat-tcaca--ca-ttttattga-----tatcatgaataa-------------------------------at----ataaacaatacaactttcaacaatggatctcttggttctcgcatcgatgaagaacgcagcgaattgcgatatgtaatgtgaattgcagaattcagtgaatcatcgaatctttgaacgcacattgcaccctctgg---taatccagagggtatgcctgtttgagtgtcattagaaatatcaaatc---c-agat----tttg------c-tct-gt-gatttggactttgaaggctt-tgctgac---tgttaaa-gtcagctccttttaaatgcattagcagg-----tt--gcaaacaa--------ct-ggccccagtttgata-ga----ctttaatcatctg----tgctgtcgcta-gtag---------ttttg----acc-gctgcaaattgtcttt------ggacttgccgtc------aggcaata--ca--tttt-------aagtcttgacctcaaatcaggtaggattacccgctgaacttaagcatatcaataa Clavaria_californica_TENN026785_HQ179660 ???????????????????????????????????????????????????????????ttgattttt--aaa---gatg-tgctgg-ccttta---c----ggg--tat------gtgcactctt-aaaaaac----ccaatatcc-acc--tgtgcactt-tct-gtaggc------------------------------------tttgcctatgcatttttta-cacaca-cca-------tg--tta-tattt-gaat------------gcctttgatt------a---acc----aattgtaaaacaactttcaacaatggatctcttggttctcgcatcgatgaagaacgcagcgaattgcgatatgtaatgtgaattgcagaattcagtgaatcatcgaatctttgaacgcacattgcaccctctgg---tattccggagggtatgcctgtttgagtgtcatt-aatatctcaacacagtcaagtt---gtttgacttgc--act-gatg-cttggatgctgaaggt---tgctggc---aatattt-gtcagctccttttaaatgtattagcagaaacctat--gcaaaaag--------ct-ggcttcagtttgataag--cac------ttatctgta-ttgctgttgcta-gtgaaa--tgcc---cttgt--ttcagcttccaattgtccaatcatttggactgcctctc-----gaggtaattt--aatctt--------gacac?????????????????????????????????????????????????? Clavaria_citrinorubra_TENN040464_HQ179661 ???????????????????????????????????????????????????????????ttgattttt--aaa--ggatg-tgctggct-gcctt--cac--ggg--tttgcat--gtgcactccgcaaaatctcc--attttacacca---ttgtgcacaa-cccagtaagc------------------------------------cttgcttacgctttt-ta-ccaaacW-ccaa----taat----a-tatca-gaatgataa--tg---cagtaggctttcac--aag-ctg----aaatttaatacaactttcaacaatggatctcttggttctcgcatcgatgaagaacgcagcgaattgcgatatgtaatgtgaattgcagaattcagtgaatcatcgaatctttgaacgcaccttgcaccctctgg---tatcccggagggtatgcctgtttgagtgtcatt-aatctctcaacacaagaaaaYt------------gt-ttcttgt-g-cttggatagtgaaggtct-tgctggcgcaaataact-gtcagctccttttaaatgcattagcagagcc--gtg--tagga----------ct-ggcctcagtttgataag-aaaa---g-tttatct--a--tgttgtcgctagat-t----t-cctctttgtg--ttcagcttcaaaccgtcttY------ggactgtctctctt---gagacaaaa--caa-----ttcatt-ga---?????????????????????????????????????????????????? Clavaria_crosslandii_BIO12762_KC759441 agagg-aagtaaaagtc-gtaacaaggtttccgtaggtgaacctgcggaaggatcattatcgattct---gaa--ggatg-tgctggct---ta----act---------gcat--gtgcactccg-aaa--------tcttcatcc-acc--tgtgcactc-tat-gtaggc------------------------------------tctgtctatgctttt---at-atacc-cc--ttttaa------a-aatcttgaatgtaaacttg----gcttgcttaacacacaagtc-g----aaatttaaaacaactttcaacaatggatctcttggttctcgcatcgatgaagaacgcagcgaattgcgatatgtaatgtgaattgcagaattcagtgaatcatcgaatctttgaacgcaccttgcaccctctgg---tattccggagggtatgcctgtttgagtgtcatt-aatctctcaacacaacgagttt---------attctt-gcttgt-g-cttggatgttgaaggc---tgccgg----cgtcatt-gccagctccttttgaatgtattagca-ggact-atgt--agga----------c-cagcttcggtttgataa-------tacttttatct--a--tgctgtcgctgag-a----at-cg-ttttg----ttcagcttctaactgtcccttctgtgggactgtctcctt-gctgaggc-at----aacctt--------gactcttgacctcaaatcaggtaggactacccgctgaacttaagcatatcaataa Clavaria_falcata_AB0532_KC759445 ????????????????????????????????gtaggtgaacctgcggaaggatcattattgatttt---aaaa-ggatg-tgctggcctt----------------ttggcat--gtgcactctt-aacaaaa----ccaatatcc-acc--tgtgcacaa-tct-gtagtc------------------------------------tttgtctatgtatct-tta-caaacaacc------attgat---gtattt-gaatgactt-at-----------------------t-aa----tattgtaaaacaactttcaacaatggatctcttggttctcgcatcgatgaagaacgcagcgaattgcgatatgtaatgtgaattgcagaattcagtgaatcatcgaatctttgaacgcacattgcaccctctgg---tattccggagggtatgcctgtttgagtgtcatt-aatctctcaacacagacaggtt---ttgttacctgt--tct-gttg-tttggattttgaaggctt-tgctggcag-tctgact-gtcagctccttttaaatgcattagcagaaatc-atg--cagaa----------ct-ggcctcagtttgataaa--------gatttatctat-gttgctgtcgccagg-ataa--tg-ctagtattt--ttcagcttctaatagtcctt---tcaggactgtctcac---ttgaggc-ata--caaactt--------gacacttgacctcaaatca?gtaggactacccgctgaacttaagcatatcaataa Clavaria_falcata_CF32637_KC759442 agagg-aagtaaaagtc-gtaacaaggtttccgtaggtgaacctgcggaaggatcattattgatttt---aaaa--gatg-tgctggcttt----------------atggcat--gtgcactctt-aacaaaa----ccaatatcc-acc--tgtgcacaa-tct-gtaggc------------------------------------tttgcctatgtctct-tta-caaacaacc------attgat---gtattt-gaatgcttt-at------------------------aaa----tattgtaaaacaactttcaacaatggatctcttggttctcgcatcgatgaagaacgcagcgaattgcgatatgtaatgtgaattgcagaattcagtgaatcatcgaatctttgaacgcacattgcaccctctgg---tattccggagggtatgcctgtttgagtgtcatt-aatctctcaacacagacaggtt---ttactgcctgt--tct-gttg-tttggatgttgaaggc-t-tgctggcag-tctgact-gtcagctccttttaaatgcattagcagaaagc-atg--cagaa----------ct-ggcttcagtttgataaa--------aacttatctgt-gttgctgtcgccagg-ataa--tg-ctagttg-t--ttcagcttctaatagtcccc--tctgggactgtctcat----tgaggc-ata--cacactt--------gacacttgacctcaaatcaggtaggactacccgctgaacttaagcatatcaataa Clavaria_falcata_GC08101406_KC759446 agagg-aagtaaaagtc-gtaacaaggtttccgtaggtgaacctgcggaaggatcattattgagttt---aaa--ggatg-tgctggcttt----------------attgcat--gtgcactcta-a----------ccaatatcc-acctttgtgcacaa-tct-gtagac------------------------------------tttgtctatgtacct-tta-caaacaacc------attgat---gtattt-gaatgcttt-at-------------------------------tatattaaaacaactttcaacaatggatctcttggttctcgcatcgatgaagaacgcagcgaattgcgatatgtaatgtgaattgcagaattcagtgaatcatcgaatctttgaacgcacattgcaccctctgg---tattccagagggtatgcctgtttgagtgtcatt-aatctctcaacacagacagatt----ctg---------tct-gttg-tttggatcttgaaggc-t-tgctggc-------gtt-gtcagctccttttaaatgaattagcagaaatc-at--gcagaa----------ct-ggcctcagtttgataaa--------gtcttatctgttgttgctgtcgccagg-ataacg---ctagt-ttt--ttcagcttctaatagtcctt---ctgggactgtctcct---tcgaggc-ata--cac--ttt-------gacacttgacctcaaatcaggtaggactacccgctgaacttaagcatatcaataa Clavaria_falcata_O73640_GU234148 agagg-aagtaaaagtc-gtaacaaggtttccgtaggtgaacctgcggaaggatcattatcgattttt--aaa---gatg-tgctggcactcctt--cacc-gg---tttgcat--gtgcactctacaaaatctccttctcttaccccac---tgtgcacac-ccaagtagac------------------------------------tttgcctatgttttt--a-tcaaaca-ccaa----taaaat----tttca-gaatgatct-atat--agtaagcttttaac--aag-ctg----aaatttaatacaactttcaacaatggatctcttggttctcgcatcgatgaagaacgcagcgaattgcgatatgtaatgtgaattgcagaattcagtgaatcatcgaatctttgaacgcaccttgcaccctctgg---cattctggagggtatgcctgtttgagtgtcatt-aatctctcaacacaagaaactt----------tgtc-ttcttgt-g-cttggatattgaaggttt-tgctggcgcaaacaact-gtcagctccttttaaatgtattagcagagca--gta--tagga----------ct-ggcctcggtttgataag-aaac-----tttatct--a--tgctgtcgctgggttt----t-cctctttgtg--ctcagcttcaaattgtcttt------ggactgtctctt----tgaggcaaa-a--aaa---ctctatt-ga---tcgacctcaaatcaggtaggactacccgctgaacttaagcatatcaata? Clavaria_falcata_OJ572007_KC759447 agagg-aagtaaaagtc-gtaacaaggtttccgtaggtgaacctgcggaaggatcattatcgatt----caaaaaggatg-tgctggcc-gc------------aag---gcataagtgcactccg---aat------ctcacatctc-cc--tgtgcactt--actgtgggc------------------------------------tttgctcatgttttttta-tcacatat-ca-------tgaat--gtat--acaaag-------ta--ggctttgtttcaaa----g-ctgaaaataaaacaatataactttcaacaatggatctcttggttctcgcatcgatgaagaacgcagcgaattgcgatatgtaatgtgaattgcagaattcagtgaatcatcgaatctttgaacgcaccttgcaccctctgg---tattccggagggtatgcctgtttgagtgtcatt-aacatctcaacgcttgatgggt---tcttgtaacccgttc-agt-g-gttggactttgaaggt---tgccgg----tgtcaaa-gccagctccttttaaatgcatgagcaaggact-att--ccgaa----------?-cggcttcggtttgataaa-----tttgacttatctg-a--tgctgtcgctgag-g-aa-----ctat-ggtcgac?-tgcttctaattgtcttc------ggactgtctcct--tgtgagg-------caac----tacatt-gactcttgacctcaaatcaggtaggactacccgctgaacttaagcatatcaata? Clavaria_falcata_SAV2011_KC759443 agagg-aagtaaaagtc-gtaacaaggtttccgtaggtgaacctgcggaaggatcattattgatttt---aaaa-ggatg-tgctggcctt----------------ttggcat--gtgcactctt-aacaaaa----ccaatatcc-acc--tgtgcacaa-tct-gtagtc------------------------------------tttgtctatgtatct-tta-caaacaacc------attgat---gtattt-gaatgactt-at-----------------------t-aa----tattgtaaaacaactttcaacaatggatctcttggttctcgcatcgatgaagaacgcagcgaattgcgatatgtaatgtgaattgcagaattcagtgaatcatcgaatctttgaacgcacattgcaccctctgg---tattccggagggtatgcctgtttgagtgtcatt-aatctctcaacacagacaggtt---ttgttacctgt--tct-gttg-tttggattttgaaggctt-tgctggcag-tctgact-gtcagctccttttaaatgcattagcagaaatc-atg--cagaa----------ct-ggcctcagtttgataaa--------gatttatctat-gttgctgtcgccagg-ataa--tg-ctagtattt--ttcagcttctaatagtcctt---tcaggactgtctcac---ttgaggc-ata--caaactt--------gacacttgacctcaaatcaggtaggactacccgctgaacttaagcatatcaataa Clavaria_flavipes_BRACR12807_KC759449 agagg-aagtaaaagtc-gtaacaaggtttccgtaggtg-acctgcggaaggatcattattgattt----aaa---gatg-tgctggcatttctt--caca-gg---tttgcat--gtgcactct--aaaatctccttctcttacccca---ttgtgcacac-tccagtaggc------------------------------------tttgtctatgctttt--a-tcaaaca-ccaa----taac----a-tgtca-gaatgatct-atgt--agtaagctttaaat--aag-ctg----aaatctaatacaactttcaacaatggatctcttggttctcgcatcgatgaagaacgcagcgaattgcgatatgtaatgtgaattgcagaattcagtgaatcatcgaatctttgaacgcaccttgcaccctctgg---cattccggagggtatgcctgtttgagtgtcatt-aatctctcaacacaagaaattt------------gc-ttcttgt-g-cttggacattgaaggttt-tgctggtgc-aacagct-gtcagctccttttaaatgcattagcaaggca--gtgt-tagga----------ct-agcctcagtttgataag--------tttttatct--a--tgctgtcgctgggt-t----t-cctctttatg--ctttgcttcaaatggtcttt------ggactgcctgtc-----aaggcaataa-c-a--t-ccttatt-ga---tcgacctcaaatcaggtaggactacccgctgaacttaagcatatcaata? Clavaria_flavipes_BRACR12809_KC759448 agagg-aagtaaaagtc-gtaacaaggtttccgtaggtgaacctgcggaaggatcattattgattt----aaa---gatg-tgctggcatttctt--caca-gg---tttgcat--gtgcactct--aaaatctccttctcttacccca---ttgtgcacac-tccagtaggc------------------------------------tttgtctatgctttt--a-ccaaaca-ccaa----taac----a-tgtca-gaatgatct-atgt--agtaagctttaaac--aag-ctg----aaatctaatacaactttcaacaatggatctcttggttctcgcatcgatgaagaacgcagcgaattgcgatatgtaatgtgaattgcagaattcagtgaatcatcgaatctttgaacgcaccttgcaccctctgg---cattccggagggtatgcctgtttgagtgtcatt-aatctctcaacacaagaaattt------------gc-ttcttgt-g-cttggacattgaaggttt-tgctggtgc-aacaact-gtcagctccttttaaatgcattagcaaggca--gtgt-tagga----------ct-agcctcagtttgataac--------tttttatct--a--tgctgtcgctaggt-t----t-cctctttatg--ctttgcttcaaattgtcttt------ggactgcctgtc-----aaggcaataa-c-a--t-ccttatt-ga---tcgacctcaaatcaggtaggactacccgctgaacttaagcatatca???? Clavaria_flavipes_BRACR15121_KC759450 ???????AGTAAAAGTC-GTAACAAGGTTTCCGTAGGTGAACCTGCGGAAGGATCATTATTGATTT----AAA---GATG-TGCTGGCATTTCTT--CACA-GG---TTTGCAT--GTGCACTCT--AAAATCTCCTTCTCTTACCCCA---TTGTGCACAC-TCCAGTAGGCAGACAGAAATCCACAGAGCAATCTGTGCAATCTGA-TTTGTCTATGCTTTTACA---AAACA-CCAA----TAAC----A-TGTCA-GAATGATCT-ATGTGTAGTAAGCTTTAAAC--AAG-CTG----AAATCTAATACAACTTTCAACAATGGATCTCTTGGTTCTCGCATCGATGAAGAACGCAGCGAATTGCGATATGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCACCCTCTGG---CATTCCGGAGGGTATGCCTGTTTGAGTGTCATT-AATCTCTCAACACAAGAAATTT------------GC-TTCTTGT-G-CTTGGATATTGAAGGTTT-TGCTGGTGC-AACAACT-GTCAGCTCCTTTTAAATGCATTAGCAAGGCA--GTGT-TAGGA----------CT-AGCCTCAGTTTGATAAG--------TTTTTATCT--A--TGCTGTCGCTGGGTTT----T-CCTCTTTATG--CTTTGCTTCAAATTGTCTTT------GGACTGCCTGTC-----AAGGCAATGA-C-AT-T--CTTATT-GA---TCGACCTCAAATCAGGTAGGACTACCCGCTGAACTTAAGC????------ Clavaria_flavipes_OJ362006_KC759451 agagg-aagtaaaagtc-gtaacaaggtttccgtaggtgaacctgcggaaggatcattattgattttt--aaa---gatg-tgctggcactcctt--cacc-gg---tttgcat--gtgcactctgcaaaatctccttctcttaccccac---tgtgcacac-ccaagtagac------------------------------------tttgcctatgttttt--a-tcaaaca-ccaa----taaca---a-tatca-gaatgatct-atag--agtaagcttttaac--aag-ctg----aaatttaatacaactttcaacaatggatctcttggttctcgcatcgatgaagaacgcagcgaattgcgatatgtaatgtgaattgcagaattcagtgaatcatcgaatctttgaacgcaccttgcaccctctgg---cattccggagggtatgcctgtttgagtgtcatt-aatctctcaacacaagaaa-------ctt----tgtcttcttgt-g-cttggatattgaaggttt-tgctggcgcaaacaact-gtcagctccttttaaatgtattagcagagca--gta--tggga----------ct-ggcctcggtttgataag-aaac-----tttatct--a--tgctgtcgctgggttt----t-cctctttgtg--ctcagcttcaaattgtcttc------ggactgtctctt-----gaggcaa----caaa----atttct-attgatcgacctcaaatcaggtaggactacccgctgaacttaagcatatcaataa Clavaria_flavostellifera_BIO10433_KC759461 ?????????????????????????????????????????????????????????????????????????????????????????????????????????????????????tgcactctc-aacc-------ttgatatcc-acc--tgtgcacat-tct-gtaggc------------------------------------cttgtctatgttttttg--ttacaca-caa--ttt----at---cttatg-ga-tggttagtt----------------------g---ga---aatactaatacaactttcaacaatggatctcttggttctcgcatcgatgaagaacgcagcgaattgcgatatgtaatgtgaattgcagaattcagtgaatcatcgaatctttgaacgcatattgcaccctcaggt-cttttccagagggtatgcctgtttgagtgtcattaaatacatcaatgtagacttgtc---ttttgattt--gctct--a-cacttggaagttgaaggc-t-tgctggt---tgtcat-gatcagctccttttaaattcattag????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????? Clavaria_flavostellifera_BRA16080_KC759463 ??????????????????????CAAGGTTTCCGTAGGTGAACCTGCGGAAGGATCATTATTGATTTT--CAAATGGGATG-TGCTGGTCTT-CTTT-CAAA-GGAG-GA--CAATTGTGCACTCTC-AACC-------TTGATATCC-ACC--TGTGCACAT-TCT-GTAGGC------------------------------------CTTGTCTATGTTTTTTTA--CACACAA-----TTT----AT---CTTATG-GA-TGGTTAGTT----------------------G---GA---AATATTAATACAACTTTCAACAATGGATCTCTTGGTTCTCGCATCGATGAAGAACGCAGCGAATTGCGATATGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCATATTGCACCCTCAGGT-CTTTTCCAGAGGGTATGCCTGTTTGAGTGTCATT-AATACATCAATGTAGACATTTC---TTTT-A---ATGTTCT--A-CACTTGGAAGTTGAAGGC-T-TGCTGGC---TGTCATTGGTCAGCTCCTTTAAAATTCATTAGC-GGGACTTTTG---AAGA----------CTTGGCTTCAGTTTGATAA--CAA------TG--TCT--A--TGCTGTCGCT-AA-GGAACA----GTTTTGT---CT-GGCTTATAATTGTCCTTT-----GGACTGTCTCTA----GTAGGC-ATAACCAAA-----ATTTT-GACTCTTGACCTCAAATCAGGTAGG?????????????????????????????? Clavaria_flavostellifera_BRACR15924_KC759466 ??????????????GTC-GTAACAAGGTTTCCGTAGGTGAACCTGCGGAAGGATCATTATTGATTTT--CAAATGGGATGGTGCTGGTTCTCCTTT-CAAAAGGGGGGA--CAATTGTGCACTCTC-AACC-------TTGATATCC-ACC--TGTGCACAT-TCT-GTAGGC------------------------------------CTTGTCTATGTTTTTTTA--CACACAA-----TTT----AT---CTTATG-GA-TGGTTAGTT----------------------G---GA---AATATTAATACAACTTTCAACAATGGATCTCTTGGTTCTCGCATCGATGAAGAACGCAGCGAATTGCGATATGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCATATTGCACCCTCAGGT-CTTTTCCAGAGGGTATGCCTGTTTGAGTGTCATTAAATACATCAATGTAGACTTGTC---TTTTGACTT--GCTCT--A-CACTTGGAAGTTGAAGGC-T-TGCTGGT---TGTCAT-GATCAGCTCCTTTTAAATTCATTAGC-GGGACTTTTG---AAGA----------CTTGGCTTCAGTTTGATA---CAA------TG--TCT--A--TGCTGTCGCT-AA-GGAACG----GTTTAGT---CT-GGCTTATAATTGTCCTTT----GGGACTGTCTCTA----GTGGAC-ATAA-CAAA-----CTTT--GACTCTTGACCTCAAATCAGGTAGGACTACCCGCTGAACTTAAGCATATCA---- Clavaria_flavostellifera_BRACR16695_KC759462 agagg-aagtaaaagtc-gtaacaaggtttccgtaggtgaacctgcggaaggatcattattgatttt--caaatgggatg-tgctggtcctccttt-caaa-gggggga--taattgtgcactctc-aacc-------ttgatatcc-acc--tgtgcacat-tct-gtaggc------------------------------------cttgtctatgttttttta--cacacaa-----ttt----at---cttatg-ga-tggttagtt----------------------g---ga---aatattaatacaactttcaacaatggatctcttggttctcgcatcgatgaagaacgcagcgaattgcgatatgtaatgtgaattgcagaattcagtgaatcatcgaatctttgaacgcatattgcaccctcaggt-cttttccagagggtatgcctgtttgagtgtcatt-aatacatcaatgtggacatttc----------ttatgctct--a-cacttggaagttgaaggc-t-tgctggt---tgtcat-gatcagctccttttaaattcattagc-gggacttttg---aaga----------cttggcttcagtttgataa--caa------tg--tct--a--tgctgtcgct-aa-ggaacg----gttttgt---ct-ggcttataattgtccttt----gggactgtctcta----gtgggc-ataa-caaa-----cttt--gactcttgacctcaaatcaggtaggactacccgctgaacttaagcatatcaataa Clavaria_flavostellifera_MA40230_KC759463 agagg-aagtaaaagtc-gtaacaaggtttccgtaggtgaacctgcggaaggatcattattgattt---caaatgagatg-tgctggcctt--tt--caaa-gg------gcaac-gtgcactttc-aacc-------tttacatcc-acc--tgtgcacct-ttc-gtagac------------------------------------tctgtctatgttttt-taat-acaca-----------tgatttattat---ggattgt-ag-tgt--ggcttt-tt----c--aagccaa----taaagctatacaactttcaacaatggatctcttggttctcgcatcgatgaagaacgcagcgaattgcgatatgtaatgtgaattgcagaattcagtgaatcatcgaatctttgaacgcacattgcaccctcaggt-cttttccagagggtatgcctgtttgagtgtcgtt-gacccatcaatgcagacaagtctctttttgatttgctttct-gt--acttggaggttgaaggc---tgccgg----cgtca-tggccagctccttttaaatttattagc-gggactt-tg---aaga----------ctcggcttcagtttgataaa----------tgcatct--a--tgctgtcgccgaa-g-aacg------tttgt---ct-agcttatagctgtcctt---ataggactgtctctt--atcgaggc---a--caa--t-gcaatc--aactcttgacctcaaatcaggtaggactacccgctgaacttaagcatatcaataa Clavaria_flavostellifera_SAV1992_KC759465 agagg-aagtaaaagtc-gtaacaaggtttccgtaggtgaacctgcggaaggatcattattgattt---caaatgagatg-tgctggcctt--tt--caaa-gg------gcaac-gtgcactctc-aacc-------tttacatcc-acc--tgtgcacct-ttc-gtagac------------------------------------tctgtctatgttttt-taat-acaca-----------tgatttattat---ggattgtag--tgt--ggcttt-tt----c--aagccaa----taaaactatacaactttcaacaatggatctcttggttctcgcatcgatgaagaacgcagcgaattgcgatatgtaatgtgaattgcagaattcagtgaatcatcgaatctttgaacgcacattgcaccctcaggt-cttttccagagggtatgcctgtttgagtgtc?tt-gacccatcaatgcagacaagtctc-ttttgatttgctttct-gt--acttggaggttgaaggc---tgccgg----cgtca-tggccagctccttttaaatttattagc-gggactt-tg---aaga----------ctcggcttcagtttgataaa----------tgcatct--a--tgctgtcgccgaa-g-aacg------tttgt---ct-agcttatagctgtcctt---ataggactgtctctt--atcgaggc---a--caa--t-gcaatc--aactcttgacctcaaatcaggtaggactacccgctgaacttaagcatatcaataa Clavaria_incarnata_BIO12560_KC759452 ??agg-aagtaaaagtc-gtaacaaggtttccgtaggtgaacctgcggaaggatcattatcgattct--caa-t-ggatg-tgctggctttctatt------ggaa----gcaa--gtgcactcct-aaca-------actttattc-acc--tgtgcacttgtgttgtaggc------------------------------------cttgtctatgatttt-taat-tcaca-cca--ttt---gat----aatc--gttgggtaact-----------------------gtcag----aata-caatacaactttcaacaatggatctcttggttctcgcatcgatgaagaacgcagcgaattgcgatatgtaatgtgaattgcagaattcagtgaatcatcgaatctttgaacgcacattgcaccctctggtac---tctggagggtatgcctgtttgagtgtcatt-aatatatcaa---acacaagac-----ttg--------tcttgt-gatttggactt-gaagggttttgctgat---tgttaaa-gtcagctccttttaaatacattagt--ggacttgtg---aa----ccccctcac-cggcctcggtttgata-g-accatctgat-catct--a--tgctgtcgctg-gt-aaa-a-a-gggtttg---acc--gcttataaatgtcttt---taaagacttgtccat-----agggc-------aac----tacatttaagccttgacctcaaatcaggtaggactacccgctgaacttaagcatatcaataa Clavaria_incarnata_MA53113_KC759453 agagg-aagtaaaagtc-gtaacaaggtttccgtaggtgaacctgcggaaggatcattattgattct--caa-tgggatg-tgctggctttctatt------ggaa----gcaa--gtgcactcct-aacaa------atttcattc-acc--tgtgcacttatgttgtaggc------------------------------------cttgtctatgattttttaat-tcaca-cca--ttt---gat----aatc--gttgggtaac-----------------------tgtcgg----aata-caatacaactttcaacaatggatctcttggttctcgcatcgatgaagaacgcagcgaattgcgatatgtaatgtgaattgcagaattcagtgaatcatcgaatctttgaacgcacattgcaccctctggtac---tctggagggtatgcctgtttgagtgtcatt-aatatatcaa---acataaga-----tttg--------tcttgt-gatttggactt-gaagggttttgctgat---tgttaaa-gtcagctccttttaaatacattagt--ggact-gtg---aa------ccctcac-cggcctcggtttgata-g-accatctgat-catct--a--tgctgtcgctg-gtgaaa-----gggtttg---acc--gcttataaatgtcttt---taaagacttgtccct------aggg------caac----tacatttaagccttgacctcaaatcaggtaggactacccgctgaacttaagcatatcaataa Clavaria_sp_BRACR16032_KC759467 agagg-aagtaaaagtc-gtaacaaggtttccgtaggtgaccctgcggaaggatcattatcgatt----caaaaaggatg-tgctggcc-gc------------aag---gcataagtgcactccg---aat------ctcacatctc-cc--tgtgcactt--actgtgggc------------------------------------tctgctcatgttttttta-tcacatat-ca-------tgaat--gtat---gaaag-------ta--ggctttgtttcaaa----g-ctgaaaataaaacaatacaactttcaacaatggatctcttggttctcgcatcgatgaagaacgcagcgaattgcgatatgtaatgtgaattgcagaattcagtgaatcatcgaatctttgaacgcaccttgcaccctctgg---tattccggagggtatgcctgtttgagtgtcatt-aacatctcaacgcttgatgggt---tcttgtaacccgttc-agc-g-gttggactgtgaaggt---tgccgg----tgtcaaa-gccagctccttttaaatgcatgagcaaggact-att--ccgaa-----------tcggcttcggtttgataaa-----tttgacttatctg-a--tgctgtcgctgag-g-aa-----ctat-ggtcgacc-tgcttctaattgtcttc------ggactgtctcct--cgtgagg-------caac----tacatt-gactcttgacctcaaatcaggtaggactacccgctgaacttaagcatatcaataa Clavaria_sphagnicola_BRACR13593_KC759455 ??????AAGTAAAAGTC-GTAACAAGGTTTCCGTAGGTGAACCTGCGGAAGGATCATTATTGATTTTT--AAA---GATG-TGCTGGCACTCCTT--CACC-GG---TTTGCAT--GTGCACTCTGCAAAATCTCCTTCTCTTACCCCAC---TGTGCACAC-CCAAGTAGACAAACAGAGTTACAGAGCAATCTGTGTAATTCCTGA-TTTGCCTATGTTTTT--A-TCAAACA-CCAA----TAACA---A-TATCA-GAATGATCT-ATAG--AGTAAGCTTTTAAC--AAG-CTG----AAATTTAATACAACTTTCAACAATGGATCTCTTGGTTCTCGCATCGATGAAGAACGCAGCGAATTGCGATATGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCACCCTCTGG---CATTCCGGAGGGTATGCCTGTTTGAGTGTCATT-AATCTCTCAACACAAGAAACTT-----------TGTCTTCTTGT-G-CTTGGATATTGAAGGTTT-TGCTGGCGCAAACAACT-GTCAGCTCCTTTTAAATGTATTAGCAGAGCA--GTA--TGGGA----------CT-GGCCTCGGTTTGATAAG-AAAC-----TTTATCT--A--TGCTGTCGCTGGGTTT----T-CCTCTTTGTG--CTCAGCTTCAAATTGTCTTC------GGACTGTCTCTT-----GAGGCAA----CAAAAT-TTCTATT-GA---TCGACCTCAAATCAGGTAGGACTACCCGCTGAACTTAAGC????------ Clavaria_sphagnicola_BRNM747282_KC759456 ???????????AAAGTC-GTAACAAGGTTTCCGTAGGTGAACCTGCGGAAGGATCATTATTGATTTTT--AAA---GATG-TGCTGGCACTCCTT--CACC-GG---TTTGCAT--GTGCACTCTGCAAAATCTCCTTCTCTTACCCCAC---TGTGCACAC-CCAAGTAGACAAACAGAGTTACAGAGCAATCTGTGTAATTCCTGATTTCGCCTATGTTTTT--A-TCAAACA-CCAA----TAACA---A-TATCA-GAATGATCT-ATAG--AGTAAGCTTTTAAC--AAG-CTG----AAATTTAATACAACTTTCAACAATGGATCTCTTGGTTCTCGCATCGATGAAGAACGCAGCGAATTGCGATATGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCACCCTCTGG---CATTCCGGAGGGTATGCCTGTTTGAGTGTCATT-AATCTCTCAACACAAGAAACTT-----------TGTCTTCTTGT-G-CTTGGATATTGAAGGTTT-TGCTGGCGCAAACAACT-GTCAGCTCCTTTTAAATGTATTAGCAGAGCA--GTA--TGGGA----------CT-GGCCTCGGTTTGATAAG-AAAC-----TTTATCT--A--TGCTGTCGCTGGGTTT----T-CCTCTTTGTG--CTCAGCTTCAAATTGTCTTC------GGACTGTCTCTT-----GAGGCAA----CAAAAT-TTCTATT-GA---TCGACCTCAAATCAGGTAGGACTACCCGCTGAACTTAAGC??-------- Clavaria_sphagnicola_OJ362006_KC759454 agagg-aagtaaaagtc-gtaacaaggtttccgtaggtgaacctgcggaaggatcattattgattt----aaa---gatg-tgctggcatttctt--caca-gg---tttgcat--gtgcactct--aaaatctccttctcttacccca---ttgtgcacac-tccagtaggc------------------------------------tttgtctatgctttt--a-tcaaaca-ccaa----taac----a-tgtca-gaatgatct-atgt--agtaagctttaaat--aag-ctg----aaatctaatacaactttcaacaatggatctcttggttctcgcatcgatgaagaacgcagcgaattgcgatatgtaatgtgaattgcagaattcagtgaatcatcgaatctttgaacgcaccttgcaccctctgg---cattctggagggtatgcctgtttgagtgtcatt-aatctctcaacacaagaaattt------------gc-ttcttgt-g-cttggacattgaaggttt-tgctggtgc-aacaact-gtcagctccttttaaatgcattagcaaggca--gtgt-tagga----------ct-agcctcagtttgataag--------tttttatct--a--tgctgtcgctgggt-t----t-cctctttatg--ctttgcttcaaattgtcttt------ggactgcctgtc-----aaggcaataa-c-a--t-ccttatt-ga---tcgacctcaaatcaggtaggactacccgctgaacttaagcatatcaat?? Clavaria_tenuipes_BRACR16026_KC759460 agagg-aagtaaaagtc-gtaacaaggtttccgtaggtgaacctgcggaaggatcattattgatttt---aaa--ggatg-tgctggcatt----------------tatgcat--gtgcactctt-aaa--------ccaatatcc-acc-ctgtgcaca--ctt-gtaggc------------------------------------tttgcctatgtttct-tca-caaacaac------tattgat---gtattt-gaatgctat-tt----------------------g-ata----aattgtaatacaactttcaacaatggatctcttggttctcgcatcgatgaagaacgcagcgaattgcgatatgtaatgtgaattgcagaattcagtgaatcatcgaatctttgaacgcacattgcaccctctgg---tattccggagggtatgcctgtttgagtgtcatt-aatatctcaacccagaca?gtt---taacaacctgc--tct-gttg-cttggatgttgaaggc-t-tgctggct--ttttcaa-gtcagctccttttaaattcattagcagaaatg-atgggcaaaa----------ct-ggcttcagtttgataaa-ctac-----tttatctgta-ctgctgtcgcta-gtgaaagatacctaacatat--ttcagcttccaattgtccca--tgtgggactgtcttct---tgaaggc-ataaccaac-tt--------gacacttgacctcaaatcaggtaggactacccgctgaacttaagcatatcaataa Clavaria_tenuipes_GC06110101_KC759458 agagg-aagtaaaagtc-gtaacaaggtttccgtaggtgaacctgcggaaggatcattattgatttt---aaa--ggatg-tgctggcatt----------------tatgcat--gtgcactctt-aaa--------ccaatatcc-acc-ctgtgcaca--ctt-gtaggc------------------------------------tttgcctatgtttct-tca-caaacaa-c-----tattgat---gtattt-gaatgctat-tt----------------------g-ata----aattgtaatacaactttcaacaatggatctcttggttctcgcatcgatgaagaacgcagcgaattgcgatatgtaatgtgaattgcagaattcagtgaatcatcgaatctttgaacgcacattgcaccctctgg---tattccggagggtatgcctgtttgagtgtcatt-aatatctcaacccagacaggtt---tcacaacctgc--tct-gttg-cttggatgttgaaggc-t-tgctggct--ttttcaa-gtcagctccttttaaattcattagcagaaatg-ataggcaaaa----------ct-ggcttcagtttgataaa-ttac-----tttatctgta-ctgctgtcgcta-gtgaaagatacctaacatat--ttcagcttccaattgtccca--tgtgggactgtcttct---tgaaggc-ataaccaac-tt--------gacacttgacctcaaatcaggtaggactacccgctgaacttaagcatatcaataa Clavaria_tenuipes_KM146565_KC759457 agagg-aagtaaaagtc-gtaacaaggtttccgtaggtgaacctgcggaaggatcattattgatttt---aaa--ggatg-tgctggcatt----------------tatgcat--gtgcactctt-aaa--------ccaatatcc-acc-ctgtgcaca--ctt-gtaggc------------------------------------tttgcctatgtttct-tca-caaacaac------tattgat---gtattt-gaatgctat-tt----------------------g-ata----aattgtaatacaactttcaacaatggatctcttggttctcgcatcgatgaagaacgcagcgaattgcgatatgtaatgtgaattgcagaattcagtgaatcatcgaatctttgaacgcacattgcaccctctgg---tattccggagggtatgcctgtttgagtgtcatt-aatatctcaacccagacaggtt---tcacaacctgc--tct-gttg-cttggatgttgaaggc-t-tgctggct--ttttcaa-gtcagctccttttaaattcattagcagaaatg-ataggcaaaa----------ct-ggcttcagtttgataaa-ttac-----tttatctgta-ctgctgtcgcta-gtgaaagatacctaacatat--ttcagcttccaattgtccca--tgtgggactgtcttct---tgaaggc-ataaccaac-tt--------gacacttgacctcaaatcaggtaggactacccgctgaacttaagcatatcaataa Clavaria_tenuipes_OJ82003_KC759444 agagg-aagtaaaagtc-gtaacaaggtttccgtaggtgaacctgcggaaggatcattattgatttt---aaa--ggatg-tgctggcatt----------------tatgcat--gtgcactctt-aaa--------ccaatatcc-acc-ctgtgcaca--ctt-gtaggc------------------------------------tttgcctatgtttct-tca-caaacaac------tattgat---gtattt-gaatgctat-tt----------------------g-ata----aattgtaatacaactttcaacaatggatctcttggttctcgcatcgatgaagaacgcagcgaattgcgatatgtaatgtgaattgcagaattcagtgaatcatcgaatctttgaacgcacattgcaccctctgg---tattccggagggtatgcctgtttgagtgtcatt-aatatctcaacccagacaggtt---taacaacctgc--tct-gttg-cttggatgttgaaggc-t-tgctggct--ttttcaa-gtcagctccttttaaattcattagcagaaatg-at?ggcaaaa----------ct-ggcttcagtttgataaa-ctac-----tttatctgta-ctgctgtcgcta-gtgaaagatacctaacatat--ttcagcttccaattgtccca--tgtgggactgtcttct---cgaaggc-ataaccaac-tt--------gacacttgacctcaaatcaggtaggactacccgctgaacttaagcatatcaataa Clavaria_tenuipes_SAV2003_KC759459 agagg-aagtaaaagtc-gtaacaaggtttccgtaggtgaacctgcggaaggatcattattgatttt---aaa--ggatg-tgctggcatt----------------tatgcat--gtgcactctt-aaa--------ccaatatcc-acc-ctgtgcaca--ctt-gtaggc------------------------------------tttgcctatgtttct-tca-caaacaac------tattgat---gtattt-gaatgctat-tt----------------------g-ata----aattgtaatacaactttcaacaatggatctcttggttctcgcatcgatgaagaacgcagcgaattgcgatatgtaatgtgaattgcagaattcagtgaatcatcgaatctttgaacgcacattgcaccctctgg---tattccggagggtatgcctgtttgagtgtcatt-aatatctcaacccagacaggtt---tcacaacctgc--tct-gttg-cttggatgttgaaggc-t-tgccggct--ttttcaa-gtcagctccttttaaattcattagcagaaatg-ataggcaaaa----------ct-ggcttcagtttgataaa-ctac-----tttatctgta-ctgctgtcgcta-gtgaaagatacctaacatat--ttcagcttccaattgtccca--tgtgggactgtcttct---tgaaggc-ataaccaac-tt--------gacacttgacctcaaatcaggtaggactacccgctgaacttaagcatatcaataa Clavaria_zollingeri_TENN58652_AY854071 agaggaaagtaaaagtcggtaacaaggtttccgtaggtgaacctgcggaaggatcattaaagaaaac--tagg--ggatg-tgctggctt-----------------taagcat--gtgcactcctcaactctt----atcctatcc-acc--tgtgcacat-cct-gtaggc------------------------------------actgcctatgttttt----acataca-cca--agt----aa--agtt----gaag--catgt-----------------------g--aa----acatattatacaactttcaacaatggatctcttggttctcgcatcgatgaagaacgcagcgaattgcgatatgtaatgtgaattgcagaattcagtgaatcatcgaatctttgaacgcatatggcaccctctct--tgaaataggagggtatgcctgtttgagtgtcattaaacttctcaatac-catttg-----------------att-ggt-g-gttggatgttgaaggt-c-tgctggtaaatcccat-catcagctccttttaaatacatgagcaggactaca--tgcaa------------c-cagctccaatttgataag-------cttgttatct----ttgttgctgctggg-agtgaat--aatgtaattgtct--gctactagttgtcctgaccattgggacttgccta----atgggc----a--aca-tttgaac---ccttgaccttcaaa????????????????????????????????????????? ; END; BEGIN TREES; Title Clavaria_subgen._Holocoryne_ITS_result; LINK Taxa = Taxa; TRANSLATE 1 Clavaria_acuta_F14294_AY228353, 2 Clavaria_argillacea_BRACR16025_KC759439, 3 Clavaria_argillacea_KM126733_KC759438, 4 Clavaria_asterospora_BIO12390_AY759440, 5 Clavaria_californica_TENN026785_HQ179660, 6 Clavaria_citrinorubra_TENN040464_HQ179661, 7 Clavaria_crosslandii_BIO12762_KC759441, 8 Clavaria_falcata_AB0532_KC759445, 9 Clavaria_falcata_CF32637_KC759442, 10 Clavaria_falcata_GC08101406_KC759446, 11 Clavaria_falcata_O73640_GU234148, 12 Clavaria_falcata_OJ572007_KC759447, 13 Clavaria_falcata_SAV2011_KC759443, 14 Clavaria_flavipes_BRACR12807_KC759449, 15 Clavaria_flavipes_BRACR12809_KC759448, 16 Clavaria_flavipes_BRACR15121_KC759450, 17 Clavaria_flavipes_OJ362006_KC759451, 18 Clavaria_flavostellifera_BIO10433_KC759461, 19 Clavaria_flavostellifera_BRA16080_KC759463, 20 Clavaria_flavostellifera_BRACR15924_KC759466, 21 Clavaria_flavostellifera_BRACR16695_KC759462, 22 Clavaria_flavostellifera_MA40230_KC759463, 23 Clavaria_flavostellifera_SAV1992_KC759465, 24 Clavaria_incarnata_BIO12560_KC759452, 25 Clavaria_incarnata_MA53113_KC759453, 26 Clavaria_sp_BRACR16032_KC759467, 27 Clavaria_sphagnicola_BRACR13593_KC759455, 28 Clavaria_sphagnicola_BRNM747282_KC759456, 29 Clavaria_sphagnicola_OJ362006_KC759454, 30 Clavaria_tenuipes_BRACR16026_KC759460, 31 Clavaria_tenuipes_GC06110101_KC759458, 32 Clavaria_tenuipes_KM146565_KC759457, 33 Clavaria_tenuipes_OJ82003_KC759444, 34 Clavaria_tenuipes_SAV2003_KC759459, 35 Clavaria_zollingeri_TENN58652_AY854071; TREE con_50_majrule = ((((((8:0.003710472191403527,13:0.003689132618100137):0.07888769510932209,(9:0.04783575341208434,10:0.1386311353557905):0.03184250360955509):0.1894042731989068,((30:0.004099586840456392,33:0.008550416982803599):0.009442168864065665,(34:0.008849741146010792,(32:0.003675201157198276,31:0.003721285375258069):0.008548015833064235):0.01141100670690178):0.17446692411089):0.06408452708238051,5:0.2305693488880474):0.1575984027924952,(((4:0.2804797918148368,(24:0.02403607390664505,25:0.03010196500789883):0.2120075904205619):0.2483154479751072,((22:0.01384289268258822,23:0.009871140220486333):0.1859668216631774,(19:0.01516413584685909,(21:0.01476476816344624,(20:0.009259427556017689,18:0.04172540990573751):0.02561820938061659):0.04162138465777786):0.2090842562745943):0.2074400498511378):0.1128740451477663,((7:0.242350747210553,(6:0.1797076032348696,(((1:0.009440625873402253,15:0.0148020655682643):0.007831600831406434,16:0.01337566784649089,17:0.009170394046232815,14:0.01463908872196672):0.1399469749869417,((11:0.03503138392658564,(2:0.003778056600814335,3:0.003802246582303444):0.05805171922632935):0.02078382843819259,(28:0.008916430199508458,27:0.003730534805160041,29:0.03711295799770536):0.02268143542054429):0.05958088109896365):0.06904303391565572):0.3435732301781246):0.08752104961253987,(12:0.02105633504928159,26:0.02435869637027302):0.4076249597578294):0.08607434079836068):0.1164014341654085):0.725209187056069,35:0.725209187056069); END; BEGIN SETS; CHARSET * excluded = 174 - 209 273 - 303 602 - 611; END; BEGIN ASSUMPTIONS; OPTIONS DEFTYPE = unord PolyTcount = MINSTEPS; TYPESET * UNTITLED = unord: 1 - 811; EXSET * UNTITLED = 174 - 209 273 - 303 602 - 611; END; BEGIN CODONS; CODONPOSSET * UNTITLED = N: 1- 811 ; CODONPOSSET CodonPositions = N: 1- 811 ; CODESET * UNTITLED = universal: 1 - 811; END; BEGIN mrbayes; set autoclose = yes nowarn = yes; outgroup Clavaria_zollingeri_AY854071; lset nst = 6 rates = invgamma; unlink statefreq = ( all ) revmat = ( all ) shape = ( all ) pinvar = ( all ); prset applyto = ( all ) ratepr = variable; mcmcp ngen = 5000000 relburnin = yes burninfrac = 0.25 printfreq = 100 samplefreq = 1000 nchains = 4 savebrlens = yes starttree = random filename = HolocoryneITSbayes; mcmc; sumt; END;