#NEXUS [written Thu Apr 10 11:05:58 CDT 2014 by Mesquite version 2.75 (build 564) at iMac/139.78.222.48] BEGIN TAXA; TITLE Taxa; DIMENSIONS NTAX=134; TAXLABELS Homo_sapiens_18652051 Mus_musculus_57527870 Danio_rerio_528518142 Nematostella_vectensis_156405737 Ciona_intestinalis_459173389 Strongylocentrotus_purpuratus_390336005 Oikopleura_dioica_313242099 Aplysia_californica_524866320 Lepeophtheirus_salmonis_225712656 Daphnia_pulex_321453246 Caligus_rogercresseyi_225709256 Branchiostoma_floridae_260830087 Caenorhabditis_elegans_71997862 Brugia_malayi_170589299 Ascaris_suum_541047205 Capitella_teleta_443691813 Echinococcus_granulosus_556515322 Loa_loa_312066533 Lottia_gigantea_556108217 Drosophila_melanogaster_19528069 Acyrthosiphon_pisum_328720850 Trichoplax_adhaerens_196009472 Ajellomyces_dermatitidis_261205294 Aspergillus_niger_145244667 Aspergillus_oryzae_169769204 Aspergillus_nidulans_67522577 Ashbya_gossypii_302309350 Debaryomyces_hansenii_294655955 Coccidioides_posadasii_303311669 Saccharomyces_cerevisiae_6323360 Schizosaccharomyces_pombe_429241520 Scheffersomyces_stipitis_150951341 Meyerozyma_guilliermondii_146423687 Neosartorya_fischeri_119470062 Penicillium_chrysogenum_255932279 Cryptococcus_neoformans_405121504 Ustilago_maydis_71024819 Mortierella_verticillata_MVEG_05231 Allomyces_macrogynus_AMAG_17335 Spizellomyces_punctatus_SPPG_01224 Neurospora_crassa_85086139 Monosiga_brevicollis_167526969 Salpingoeca_sp_326431706 Entamoeba_dispar_167380300 Entamoeba_histolytica_67472722 Entamoeba_invadens_471208618 Dictyostelium_fasciculatum_328874203 Dictyostelium_purpureum_330845458 Dictyostelium_discoideum_66805693 Polysphondylium_pallidum_281208603 Arabidopsis_thaliana_42568561 Glycine_max_571506330 Vitis_vinifera_296089926 Ricinus_communis_255563474 Populus_trichocarpa_224123176 Sorghum_bicolor_242066962 Physcomitrella_patens_168067837 Physcomitrella_patens_168052241 Physcomitrella_patens_168052243 Selaginella_moellendorffii_302756067 Volvox_carteri_302828098 Chlorella_variabilis_307104732 Chlamydomonas_reinhardtii_159469087 Coccomyxa_subellipsoidea_545358533 Cyanidioschyzon_merolae_544210593 Galdieria_sulphuraria_545709277 Porphyridium_purpureum_contig_3419.3 Ectocarpus_siliculosus_298705733 Schizochytrium_aggregatum_Schag1_83217 Aplanochytrium_kerguelense_Aplke1_105217 Aurantiochytrium_limacinum_Aurli1_32548 Saprolegnia_diclina_530740957 Albugo_laibachii_325192212 Phytophthora_infestans_301120488 Phytophthora_ramorum_JGI_2507661889 Phytophthora_sojae_348676426 Perkinsus_marinus_294890669 Plasmodium_berghei_68063625 Plasmodium_knowlesi_193810136 Plasmodium_falciparum_124513330 Plasmodium_vivax_156099184 Plasmodium_cynomolgi_457873656 Plasmodium_yoelii_82752821 Tetrahymena_thermophila_146165677 Theileria_annulata_65303484 Theileria_parva_71026135 Babesia_bovis_156087951 Giardia_lamblia_159108475 Giardia_intestinalis_253742205 Spironucleus_salmonicida_558601652 Leishmania_infantum_146083652 Leishmania_major_157867676 Trypanosoma_cruzi_407838812 Trypanosoma_congolense_342181069 Trypanosoma_brucei_72389282 Leishmania_braziliensis_154335346 Trichomonas_vaginalis_154423037 Buchnera_aphidicola_15617045 Cand_Riesia_pediculicola_295698311 Lamprocystis_purpurea_521993334 Xanthomonas_oryzae_188577783 Legionella_drancourtii_493928026 Pseudoalteromonas_sp_494620031 Bermanella_marisrubri_494076806 Halomonas_elongata_307544784 Oxalobacteraceae_bacterium_522193879 Cycloclasticus_pugetii_519006632 Cand_Vesicomyosocius_okutanii_148244464 Hippea_alviniae_550921245 Gayadomonas_joobiniege_516014004 Veillonella_parvula_490831099 Alteromonas_macleodii_407699945 uncultured_bacterium_406979593 Clostridium_tetani_28211675 Desmospora_sp_497395288 Aminicenantes_bacterium_551142562 Psychromonas_ingrahamii_119944941 Spiribacter_sp_554595317 Methylotenera_mobilis_518740026 Gilvimarinus_chinensis_519052214 Psychromonas_sp_470478781 Methylomicrobium_alcaliphilum_357405202 Halomonas_lutea_517847798 Marinobacterium_rhizophilum_522174335 Methylotenera_sp_519028046 Rhodanobacter_sp_495486361 uncultured_bacterium_406999011 Xenorhabdus_bovienii_290476194 Halomonas_zhanjiangensis_517747105 Escherichia_coli_487633144 Hahella_ganghwensis_521078440 Firmicutes_bacterium_547821648 Cand_Kuenenia_stuttgartiensis_91202924 Pedobacter_arcticus_515829424 ; END; BEGIN CHARACTERS; TITLE 'Nicotinate-Nucleotide Adenylyltransferase Alignment'; DIMENSIONS NCHAR=322; FORMAT DATATYPE = Protein GAP = - MISSING = ?; MATRIX Homo_sapiens_18652051 MEN---------------------------------------------------------------------------------------------------------------TEVVLLACGSFNPFTNMHLRLFELAKDYMNGTVVKGIISPVGDAYKKKGLIPAYHRVIMAELATKNSKWVEV-DTWESL-QKEWKETLKVLRHHQEKLAVPKVKLLCGADLLESFAVPNLWKSEDITQIVANYGLICVTRAGNDAQKFIHVVNEWIANDISSTKIRRALRRGQSIRYLVPDLVQEYIEKHNLYSS----------AKT Mus_musculus_57527870 MDS---------------------------------------------------------------------------------------------------------------TEVVLLACGSFNPITNMHLRLFELAKDYMHASVIKGIISPVGDAYKKKGLIPAHHRIIMAELATKNSHWVEV-DTWESL-QKEWVETVKVLRYHQEKLGVPKVKLLCGADLLESFSVPNLWKMEDITQIVANFGLICITRAGSDAQKFIHLVNEWITNDISSTKIRRALRRGQSIRYLVPDLVQEYIEKHELYNT----------STL Danio_rerio_528518142 MAS---------------------------------------------------------------------------------------------------------------IKLVLLACGSFNPITNMHLRMFELARDHLEDKVVKGIISPVGDGYKKKGLIEACHRLEMARLATESSEWITV-DDWESQ-QPEWVETAKVVRHHHAVLDHSHLNLLCGADVLESFGVPNLWKPEDIEEIVGRYGVTCITRCGSDAEKFISVVREWVTNEISATHIRRALRRGQSVRYLLPDSVVRYIQDHSLYSA----------NTE Nematostella_vectensis_156405737 MAA---------------------------------------------------------------------------------------------------------------KKVVLLSCGCFNPVTHMHLRLFELARDTLHRTVVEGIFSPAHDAYKKKDLVASQHRLAMCNLAVKTSSWLRV-DDWESK-QDGWSTTKTVLNYMTEQANSCTVKLLCGADLLESFAVPGLWLDSDIESIVKEHGIVVITRHGSNPEEFIHIVTEWIPNEISATKIRCALRRRESIKYLVPDSIIDYIHNNKLYTP----------VKG Ciona_intestinalis_459173389 ----------------------------------------------------------------------------------------------------------------------------------MHLKMFDLARDYFHKKVKFGGISPTADSYGKPELVNAKHRQNMIKLALQENSWVSL-LDWESN-LNKWTPTEKVLTHYKQNEKELKLFLLCGADLMQSFVTPGLWKESDIRKIVNNFGLVVITRASYDPREFIHIVEECIENKLSSTKIRKAVLEGRSIKYLTPDVVIEYINEHGLYQK----------NKE Strongylocentrotus_purpuratus_390336005 MPG------------------------------------------------------------------------------------------------------INSTPCTKCTRVLLLACGSYNPITNMHLRMFEIARDYLHHQVIGGVLSPVNDGYKKQSLISSKHRIEMCKMAVENSDWLKV-DTWEAE-QPNWLTTVKVLTHFDSELLGVEVKLLCGADLLESFAVPDLWDKEDLETIVGKHGLVVITRSGSDPYKFIHIVTEWISNEISSTKIRTALRRDKSVKYLIPEPVVKYVKENGLYKE----------KNK Oikopleura_dioica_313242099 MVT-------------------------------------------------------------------------------TR----------------------SSSPTARSKKVTLLQCGSFNPPHYMHLRSQELAKIHLEK-VIAGWMSPVSDGYRKTGLVCSKHRIEMLKSATADSSWI--VSSWEAD-KPEWTPTAEVVKYHVEKSFDAQTYLLLGGDAFASFNIQNLWT--DSVEMIASNGIIVVDRDGSNVQ-IIEVVNPGIVNGLSSTYVRQLLMEKQSIKYLVPEELRKYLEENEIYTA----------TTK Aplysia_californica_524866320 ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------MLKAALKSSDWIKM-DTWESD-QSSWSPTAKVLRHHRQQTPAPCVKLLCGADLLESFAVPGLWQEEDIDYIVGQHGLVVITRSGSDPHKFIYIVTEWIYNDISSTKVRRALRRGDSVKYVVQDTVIDYIRQHQLFGV----------TCV Lepeophtheirus_salmonis_225712656 MSR---------------------------------------------------------------------------------------------------------------INVILLSAGSFNPPTHMHLRMFEIAKDFLHQHVLGGIMSPVHNDYKKESLSEATHRNAMVNLCIKKNPFLKL-STYETS-QDSWTRLKIVLEEHKRLLEPFQILFLCGADLLESFSVPGLWLDDDVEVIVKDFGLVVISREGSNPEKFIHLVTEWITNDISSTKVRRAMRRNESVKYLIPDEVIEYISEHGLYGA----------GKK Daphnia_pulex_321453246 MNK---------------------------------------------------------------------------------------------------------------TRTVLIAVGSFNPPTNMHLRIFELAKDFLQKEVLGGIISPVHDQYGKKGLVSAEHRCSMLKLAVETSNWVNI-SEWETQ-QEGWTRTAESLKFHKKALLNINLKLLCGADLIESFAVPGLWKDEDIEDIVSNYGLVVISRSGSNPQQFISIVPEWITNEISSTKIRRALSRGESVRYLTSDSVSGVSEFDGIVLA----------YHQ Caligus_rogercresseyi_225709256 MSK---------------------------------------------------------------------------------------------------------------MNILLFAAGSYNPPTHMHLRMFEIAKDFLHSHVLGGIVSPVHDDYKKESLSEAAHRRAMLNLCLKEHPFVKL-SRFETE-QGSWTRLRKVLEEHHNLLEPFKILFLCGADLLESFSVPGLWTDEDMEVIVKDFGLVVISREGADPQKFIHIVTEWITNDISSTKVRRALRRHESVKYLIPDEVIEYISKQGLYGT----------HQT Branchiostoma_floridae_260830087 MAA---------------------------------------------------------------------------------------------------------------GRVVLLACGCFNPITNMHLRLFELARDHLEKKVIEGIISPAHDKYGKKGLVPSTDRIAMAQLALSTSDWVRV-DSWESE-QKGWLETAVVARHLKRQVGDVQLKLLCGADLLESFAVPKLWRDEHIKELVSDFGLVVISRAGSNPEKFIHLVTEWIQNEISATKIRQELRRKESVRYLVPDPVINYINEHQLYQP----------ETS Caenorhabditis_elegans_71997862 MGT---------------------------------------------------------------------------------------------------------------EKVVILAVGSFNPPTNGHLCMMEDAKYSLEK-VLEGIMSPVSDGYAKKSLISAKHRLAQTEAATYDSDWIHA-SGWECA-QSEWTATVNVLKHHQQDVSDVNVLLLFGGDVIESFDKFPVWDREDVEEIISA-GIVVRSRPGSDPEQTVHFIKNAISNSISSTSLRAALKEHRSIKYTTPDSVIKYIKDHRLY--------------E Brugia_malayi_170589299 MEK---------------------------------------------------------------------------------------------------------------RQVALLSCGTFSPPTYMHLRMFERARDYLKKEVVEGIMSPVADSLGRPDIVPAKHRLKMVELAVKSSSWIRA-DGWECS-QGDWIRTIHVLHHFKKVFCKVRLLLLCGGDVIESITKLMLWNTKQIEEVVRDFGMVVVMRANTDPVSAIFVIDETCPNDISSTRLRTAIRRKESIRYCTSDEVIQYIEDNSLYGA----------PAM Ascaris_suum_541047205 MDG---------------------------------------------------------------------------------------------------------------RRVALLACGSFNPPTYMHLRMFVRARDYLEKVVVEGILSPVADSFRKPDLLTAEHRLKMVQLAVRNSTWLRA-DGWECS-QSEWTRTLHVLNHFKKQLSGIRLMFLCGGDVVESFAKTRIWNPEHVEEIVRDFGLVVIARTNSDPMKTIHVIDETCPNDISSTRLRTAVRRRESIRYCTDDEVISYIEKNNLYSFDSPNYDNVTLTTV Capitella_teleta_443691813 MAL---------------------------------------------------------------------------------------------------------------QKVVLLCCGSFNPITNMHLRMFELARDALDAKVVGGIISPVNDAYTKPSLVSAKHRSTMIRLALQTSDWIKL-DTWESE-QESWLETLKVLKHHRESIGMPRIKLLCGADLLSSFAEPGLWKDQDIEEIVGKYGIVCITRANANPENFIHIVTEWIHNEISSTKIRRALSRSKSIKYLVQDPVIEYIKENRLYSK----------LDK Echinococcus_granulosus_556515322 MNE----ATADSESYSSYSSSTSTSPRDPAVK--------------------------------SAAMSSERGSPI------SA------PLGKKEDLVVE--PPEGELPTHPCEPVVLVACGSFNPITTMHLRMMELARDAVEKVVVVGILSPVSDAYAKEGLASAASRCRLARLACATSDWLAV-DSWEAS-RTQWTPTRCVLERIQARMLPVRVKLVCGADLLESFNTPNLWSEDDMTALVRDYGIVCISRPGSNAARLVILATEWCQNGLSATLVRRALARGQSVRYLVPDAALEEIYAHGLYGAVIPSLLPPQVTTT Loa_loa_312066533 MEK---------------------------------------------------------------------------------------------------------------RRVALLSCGTFSPPTYMHLRMFERARDYLKREVVEGIMSPVADSLGRPDMVPAKHRLKMVELAVKSSSWIKA-DGWECS-QGEWIRTIHVLHHIKEVLCKVQLLLLCGGDVIESITKLMLWNTKQIEEVVRDFGVVVVMRANTDPVSAIFVIDETCPNDISSTRLRTAIRRKESIRYCTSDEVIQYIEDNSLYGAASPDYHDFTLTTV Lottia_gigantea_556108217 MSA---------------------------------------------------------------------------------------------------------------EKVVLLACGSFNPITNMHLRLFELARDSLNKNVIGGIISPVNDKYSKEGLESAKHRCGMIEHALKTSSWIKL-DKWECQ-QDEWLVTAKVLAHHREKLPGVRLKLLCGADLLESFGKPGLWSPQDIEDILQNYGLVCVTRCGTDPSKFIHLVTEWIFNDISATKIRRALRRGESVKYLVQDNVIDYIKKHQLYHV----------PDK Drosophila_melanogaster_19528069 MSA---------------------------------------------------------------------------------------------------------------PRIAFIACGCFSPPTPMHLRMFEIAKDHFEMRVVGGIISPTHDSYGKKGLASALDRCAMVKLATQSSNWIRL-SDWEVH-QNQWMRTQAVLQHHQNYIDPVHLKLLCGADLLESFAVPGLWAEADIEDIVANHGLVVITRAGSNPGKFITLITNWVPNEVSSTLIRRLLGRGQSVKYLLDDLVLEYIKRQRLFNF----------CDS Acyrthosiphon_pisum_328720850 MFL---------------------------------------------------------------------------------------------------------------KNIILLSTGSFNPPTNMHLRMFEIARDHLNRTICGGLMSPTHDSYKKKDLAPSLHRCAMIEQALVALPWVKM-SDWEVK-QNGWTRTRQVLQYHQNHLRAVNVRLLCGADLLESFAVPGLWNDDDIEAIVRDYGLVVVSRSGSNPHKFIIVVTEWITNEVSSTKVRRALSRNESVKFLISELVESYIKEHGLYETNKTHKTYQMDRYQ Trichoplax_adhaerens_196009472 MAS---------------------------------------------------------------------------------------------------------------SPLILLACGSFNPITHMHLRLFENARDAMNANVKAGIVSPVHDSYKKEGLISSKHRLEMCNIALQTSDWIRC-NDWECR-RSEWSRTVEVLRYIKSISQDVGVKLLCGADLLESFATPNLWSTDDLQEIVEKFGLVCITRHGSDPRKFIHIVTEWIPNEISSTCIRRALRRQQSIKYLVPDSVADYIYKHSLYS-----------TVH Ajellomyces_dermatitidis_261205294 MVD--------------------------------------------------------------------------------------------------GKGNPYKFPDHRLTPLLLVACGSFSPTTYLHLRMFEMAADYIKFELIGGYLSPVSDAYKKAGLASAVHRVAMCQLAVETSNWLMV-DPWEPM-QKEYIPTAKVLDHFDHYIKPVHVALLAGADLIHTMSTPGVWSEKDLDHILGRYGTFIVERAGTDIDEAIYVIQQLIQNDVSSTKIRLFLRREMSVRYLIPSPVINYIEKHHLYED----------PSG Aspergillus_niger_145244667 MTD----------------------------------------------------------------------------------------------------SSMYAFPELRLTPLLLVACGSFSPITYLHLRMFEMAADYVKFELVGGYLSPVSDAYRKAGLASAEHRVAMCQLAVDTSDWLMV-DTWEPM-QKEYQPTAVVLDHFDHEIKPIQIALLAGADLVHTMSTPGVWSEKDLDHILGKYGTFIVERTGTDIDEAIHVIQQLIQNDVSSTKIRLFLRRDMSVRYLIPVPVIHYIEQHNLYKD----------SSG Aspergillus_oryzae_169769204 MTD----------------------------------------------------------------------------------------------------PAMYQFPELRLTPLLLVACGSFSPITYLHLRMFEMAADYVKFELIGGYLSPVSDAYRKAGLAAAEHRVAMCQLAVETSDWLMV-DTWEPM-QKAYQPTAVVLDHFDHEIKHVRIALLAGADLIHTMSTPGVWSEKDLDHILGKYGSFIVERSGTDIDEAIHVIQQLIQNDVSSTKIRLFLRREMSVRYLIPVPVIRYIEQHRLYGD----------KSG Aspergillus_nidulans_67522577 MTE----------------------------------------------------------------------------------------------------MPVYVFPEYRLTPLLLIACGSFSPITFLHLRMFEMAADYVKLEIIGGYLSPVSDAYRKAGLASANHRIAMCQRAVDTSDWMMV-DTWEPM-HKEYQPTAIVLDHFDYEIKRVQVVLLAGADLVHTMSTPGVWSEKDLDHILGQYGTFIVERSGTDIDEAIHVIQQLIQNDVSSTKIRLFLRRDMSVRYLIPDPVIEYIYENNLYMD----------PSN Ashbya_gossypii_302309350 MDP-----------------------------PDSIPENGPIMLADYNSIDAPIPKSYMNSSQPSNCSKGRGGSGS------SSSECGESHAADSSKMVQA--PCLYEFPTHRLLPLVIVACGSFSPITHLHLRMFEMAMDAIVEEVVGGYYSPVSDNYNKPGLASATHRVRMCELACETSSWLMV-DAWESL-QPQYTRTAKVLDHFNDEIIGVKIMLLAGGDLIESMGEPNVWADADLHHILGNYGCLIVERTGSDVRSFILVIKQMIYNDISSTKVRLFIRRGMSVQYLLPNSVIRYIQEYGLYVN----------NKD Debaryomyces_hansenii_294655955 MDP-----------------------------PSSIPKNIPIELADLGAMDAPSHPSSGRVHMVHEDMKADQYKSK-------SD----NVPEQPPSKSTA--PQLYSFPTHRLYPLVIVACGSFSPITYLHLRMFEMALDAISEEVVGGYFSPVSSNYKKQGLAPAPHRVRMCELACETSSWLMV-DAWESL-QPKYTRTALVLDHFNEEIRGVKIMLLAGGDLIESMGEPDVWADQDLHHILGKYGCLIVERAGADVRSFFLVIKQLIYNDISSTKIRLFIRRGMSVQYLLPNSVIRYIQEHKLYIN----------KTD Coccidioides_posadasii_303311669 MTG----------------------------------------------------------------------------------------------------SVLYSFPDDRLTPLLLVACGSFSPITYLHLRMFEMAADYVKFELIGGYLSPVSDAYRKAGLASARHRIAMCQLAVDTSNWLMV-DPWEAL-QKDYSPTAKVLDHFDHEIRPVRIALLAGADLIHTMSTPGVWSEEDLDHILGRYGTFIVERSGTDIDEAIYVIQQLIQNDVSSTKIRLFLRREMSVRYLIPGPVIDYIVEHHLYEE----------ASD Saccharomyces_cerevisiae_6323360 MDP-----------------------------PESIPKSIPIILADANSIDAPFIKRKKHHHHHSRKEGNDKKHQH------SSDDDRYGSDSTSETQKYA--PHLYEFPSHRLLPLVIVACGSFSPITYLHLRMFEMALDAISEEVIGGYYSPVSDNYQKQGLAPSYHRVRMCELACETSSWLMV-DAWESL-QPSYTRTAKVLDHFNHEIIGVKIMLLAGGDLIESMGEPNVWADADLHHILGNYGCLIVERTGSDVRSFILIIKQLIYNDISSTKVRLFIRRAMSVQYLLPNSVIRYIQEHRLYVD----------NKE Schizosaccharomyces_pombe_429241520 MHT-------------------------------------------------------------------------------NSSGG-------REASLGM--PRLYIFPKHRFIPLVLVACGSFSPITYLHLRMFEMATDTIQEELVAGYFSPVNDHYKKEGLAPAYHRVRMCELACETSSWLMV-DAWESL-QPSYTCTARVLDHFDEEIRPCKIMLLAGGDLIASMGEPGVWSDKDLHHILGKFGCCIVERTGSDVWAFILVIKQLIYNDISSTKVRLFIRRGMSIRYLLPNSVIQYIERYALYRD----------MEP Scheffersomyces_stipitis_150951341 MDP-----------------------------PSSIPLNMPIQLADLGAVDAPPHPPKNKHAV---VDEFGNYHSK------DVDSQ--DQTVPPPTKSSA--PHLYQFPTHRLYPLVIVACGSFSPITYLHLRMFEMALDAITEEVIGGFYSPVSSNYKKQGLAPAHHRVRMCELACETSSWLMV-DAWESL-QPRYTRTALVLDHFNEEIRGVKIMLLAGGDLIESMGEPDVWADQDLHHILGKYGCLIVERTGSDVRSFVLVIKQLIYNDISSTKIRLFIRRGMSVQYLLPNSVIRYIQQHKLYYD----------NAD Meyerozyma_guilliermondii_146423687 MDP-----------------------------SSSIPKNMPIQLADLGSVDAPAHPSISTPSH---DDKSKRHHSK------SAD----IETPPPPSKPTA--PHLYEFPTHRLYPLVIVACGSFSPITYLHLRMFEMALDAITEEVIGGYYSPVSSNYKKQGLADAHHRVRMCELACETSSWLMV-DAWESL-QPKYTRTALVLDHFNEEIRGVKIMLLAGGDLIESMGEPDVWADQDLHHILGKYGCLIVERTGSDVRSFVLVIKQLIYNDISSTKIRLFIRRGMSVQYLLPNSVIRYIQEHKLYFN----------KAD Neosartorya_fischeri_119470062 MTD----------------------------------------------------------------------------------------------------PPMYTFPEHRLTPLLLVACGSFSPITYLHLRMFEMAADYVKFELIGGYLSPVSDAYRKAGLASAEHRVAMCQLAVDTSNWLMV-DTWEPM-QKEYQPTAVVLDHFDHEIKPVRVALLAGADLIHTMSTPGVWSEKDLDHILGKYGSFIVERSGTDIDEAIYVIQQLIQNDVSSTKIRLFLRREMSVRYLIPVPVIHYIEQHHLYED----------KSG Penicillium_chrysogenum_255932279 MAI----------------------------------------------------------------------------------------------------PAMYTFPEYRLTPLLLVACGSFSPITYLHLRMFEMAADHVRFELIGGYLSPVSDAYRKAGLASAEHRVAMCQLAVETSDWLMV-DTWEPT-QKAYQPTAVVLDHFDHEIKPVRIALLAGADLIHTMSTPGVWSEKDLDHILGKYGSFIVERSGTDIDEAIHVIQQLIQNDVSSTKIRLFLRREMSVRYLIPVPVIHYIEQHHLYED----------EGR Cryptococcus_neoformans_405121504 MAS----SEPSLFLTAASHTSTAEESRDPMMSDSPLTEGSQIDALEMDTPPRPAE----------------SPKPA------GAEAKRTTGYDAGRNADLS--GGKYRFPRHRLIPLVIVACGSFSPPTYLHLRMFEMAKDEIVEEIMAGYYSPVSSYYKKSGLAPAPHRVRMCELAVETSTWLMV-DPWEAG-QPEYQRTAFVLDHFDEMLRRYKIMLLAGGDLIESFGEPGVWSEPDLHVILGRFGCLIVERAGSDVWAFVVVIKQLIYNDISSTKVRLFVRRGMSIKYLLPNSVIQYIQDNKLYHG----------GKH Ustilago_maydis_71024819 MPR----GGDEAGKHSDPHRSNDSNGHLESRFSLALSPDKPIMSTETSAVDRPGRRSDDTGSNNSTSNSRTLSFSA------DAEDA------ADEEPEGA--DRQYSFPRHRLTPLVVVACGSFSPPTYLHMRIFEMAKDQIIEELLAGYYSPVSDYYKKEGLAKATHRVRMCELAVETSTWLMV-DAWESL-QDEYQRTAVVLDHFHDEIKNVKIMLLAGGDLIQSMGEPGVWATADLHHILGQYGCLIVERTGADVWSFLKIVKQTIYNDISSSKIRLFVRRGQSIKYLLPNSVIQYIEKEGLYRL----------ANW Mortierella_verticillata_MVEG_05231 MPP----------------------------------------------------------------------------------------------NLNS--EAEYTFPRERITPLVIVACGSFSPITYLHLRMFEMARDHIVEEIMGGYFSPVSDFYQKAGLAEAKHRVRMCELAVESSTWLMV-DSWESL-QTSYQRTAIVLDHFQNELKPIKIMLLAGGDLVQSFAAPDVWATADLHHIIGKYGCLILERTGSDVYEFVFVIKQLIYNDISSTKIRLFIRRGMSIKYLLPTAVVDYIYAQGLYKH-----------DH Allomyces_macrogynus_AMAG_17335 MSQ----------------------------------------------------------------------------------------------------AAIYTFPDAKLEPLVLVACGSFSPITYLHLRMFEMAIDYLREEVLGGYFSPVNDAYGKPGLAPASHRVAMCRLAVAPSEWLMV-DPWEAA-QPAYMRSADVLDHFDQELRAVRIMLLAGGDLIESFGTPNLWAEADLHRIMGEYGCVIVERTGTDVWGFVFVVKQLIYNDISSTKVRLFVKRNMSIKYLVPDPVMHHIYAHQLYVG----------DRD Spizellomyces_punctatus_SPPG_01224 MSS-------------------------------------------------------------------------------------------------A--PHPYVFPKDKLIPLVIVACGSYSPVTNLHLRMFEMARDYINDCLLGGYFSPVSDAYNKPGLAAWNHRVRMCELAVADSDWLMV-DPWESR-QPEYQRTAWVLDHFDRMLPRIHIMLLAGGDLIQSFAVPNLWKESDLDHIIGDFGCLIIERSGADLTEFIHLIQQHINNDISSTKIRLFVKRRLSIKYLLPDSVVKYIGEQGLY--------------Q Neurospora_crassa_85086139 MSS--------------------------------------------------------------------------------------------------VTPPTYTFPQAKLTPLVLVACGSFSPITFLHLRMFEMASDFVRFEVCGGYLSPVSDAYKKAGLAPGHHRVEMCSRAVEHSSWLMV-DPFETV-NPAYVPTARVLRHFDHEIRKAKIALLAGADLVMSMGEPGLWSPVDLGVILGEYGAFIIERSGTDIDEAIWVISQVIQNDISSTKVRLFLKKDLSVRYLIPDPVVEYIEEHGLFQD----------QQS Monosiga_brevicollis_167526969 MAG---------------------------------------------------------------------------------------------------------VGCAVWEPVVLIACGSFSPVTLMHLRLLEDARDTLHAHVIGGYLSPTHDKYGKKTLALGHHRLNMTALAVEDSEWLNV-DVWENA-QSGWTPTALVLDRFERALKPIKVMLTCGADLLDSFETIPLWQPAH-QDIIARNGIVCLERQGTDIDEVIVVFPPAVTNSISSTTVRRQLAQGRSVRYLIPRPVEDYIYRHQLHRL----------WQA Salpingoeca_sp_326431706 MFA---------------------------------------------------------------------------------------------------------APLECLQPAVLVACGSFSPITNMHLRIFEDARDDLAQDVIGGYVSPTHAKYGKASLASMPDRLNMTQLALQSSSWVNL-SSWECA-QSGWTRTAVVLQHFADELHPVKVMLLCGGDLLDTFDVIPLWLPQD-RETILRNGIVCIERKGTDLQQVIYIIKPQIENDISSSSVRRLLAQGRSIKYLVPDDVIAYIKQHSLHEL----------AQQ Entamoeba_dispar_167380300 MEE----------------------------------------------------------------------------------------------------------------NIILVCCGSYNPIHYIHLLLFELTKNYFKENVVKGIISPANDLYWKKGLLSSKHRVAMCQEAVKTSDWII-VDDWESTQ-KEYVRTYNVLAHEREVYNDYDIYFIGADDLIPNMMNKNCWDQVLLEKIVNEFGIVFFKRINPNCSEQIFIIQ-SFQSQHSSTLVRQLVKSGMSIKYLVPDSVINYITEHQLYLE----------EKD Entamoeba_histolytica_67472722 MEE----------------------------------------------------------------------------------------------------------------DIIIVCCGSYNPIHYIHLLLFELTKNYFKENVVKGIISPANDLYWKKGLLSSKHRVAMCQEAVKTSDWII-VDDWESKQ-KEYVRTYNVLKHEREVYNEYDIYFIGADDLIPNMMNKNCWDQVLLEKIVNEFGIVFFKRTNPNCSEQIFIID-SFQSQHSSTLVRQLVKSRMSIKYLVPDEVIYYITQHQLYL-------------E Entamoeba_invadens_471208618 MQS---------------------------------------------------------------------------------------------------------------KSIILVCCGSFNPIHELHLLIFEIAKNYFTLNCYKGIISPANDRYWKNGLLHSSHRVAMCREAVKTSDWIT-VDDWESKQ-TDYVRTYNVLSHEREVYNDYDIYFIGSDDLLPNMADPKCWDPVLLEKLVSEFGVVMLRRLLENPEKEIFVCS-GFQAQHSSTEVRNLVKQGLSIKYMVPDLVIDYIKANKLYL-------------E Dictyostelium_fasciculatum_328874203 MTQ---------------------------------------------------------------------------------------------------------FPIDKLQPVVLLACGSFNPITFMHLRMFEICKDWCNNHVIGGYMSPVGDAYKKATLIAAHYRLQIVNLAVMSSEWVMM-DKWESM-NLDFTPTRQVLDHFHLYVRPVQIKLICGADLLASFNVPNLWDEEDM-KIITKYGIICIERPGTNFQEIIYHVPVGITNDLSSTKIRDMISKGLSINYLTEAPVIDYIHKNNLYGY-----------KK Dictyostelium_purpureum_330845458 -----------------------------------------------------------------------------------------------------------------------------------------MANDYYNNEVIGGYLSPVGDAYNKKTLIEAFHRLKMVDLALEDSDWIMA-DPFESS-KNEFTPTRQALDHFKQCTSDLAVKLVCGADLLGSFNIPKLWADSDMDLLSSHYGIAVLERTGTDLEGILDFIPVDISNDVSSTRIREKIRNGGSIKYLIPDKVIDYIYKNNIYKN----------FRK Dictyostelium_discoideum_66805693 ------------------------------------------------------------------------------------------------------------------------------------------------------YLSPVGDGYDKKTLIESSHRTTMVELSIEDSDWLMM-DRFESD-KPIFTPTRQVLDHIKLSVCKVNVILVCGSDLLGSFNIPNLWSDNDMNLLSSNFGIAVIPRIGSNLNDIIYLIPADITNDVSSTKIREKLRNKFSVKYLMPDNALNYIKSKNIYKT----------NKL Polysphondylium_pallidum_281208603 MEK--------------------------------------------------------------------------------------------------YNKLPYQFLTNKLQPVVLISCGSFNPVTFMHLRMFEICKDWCNDEVLGGYLSPVGDAYKKATLIPMKYRCEMLSLALESSEWLNI-DTWEAR-RPEFTPTRQVMDYIHRAVVTVQLKLVAGADLLGTFNVPKLWADQDMDKITSEYGFLCLERTGSDIEDIVKTIKVSITNDVSSTKMRELVKNNKSLKYLTLDPVIEYISSNNLY--------------K Arabidopsis_thaliana_42568561 MDV-----------------------------------------------------------------------------------------------------------VEKLTCVVLVATGSFNPPTFMHLRMFELARDELRSHVLGGYMSPVNDAYKKKGLLSAEHRLEMCNVSCQSSDFVMV-DPWEAS-QSNYQRTLTVLSRVKTFLESLKVMLLCGSDLLLSFCTPGVWIPEQLRTICKDYGIVCIRREGQDVENMVKIVDNTVPNQISSSRLRQCISRGLSVKYLTEDGVIDYIRQHQLYT-----------ELT Glycine_max_571506330 MCS------------------------------------------------------------------------------------------------------VVPLPRDKLIYVILVATGSFNPPTFMHLRMFELARDALNSCVIGGYLSPVNDAYKKKGLISAEHRIQLCHLACKSSDFIMV-DPWEAS-QSTYQRTLTVLSRVHNSVESLKVMLLCGSDLLHSFSIPGFWIPDQVKTICKDYGVVCIPREGQDVEKTIKVVNELVPNQISSTRVRDCIARGLSIKYLTADEVIDYIREQQLY-------------LN Vitis_vinifera_296089926 MDI-----------------------------------------------------------------------------------------------------------LEKLMYVALVATGSFNPPTNMHLRMFELARDALRSCVIGGYMSPVNDAYKKRGLISAEHRIQMCDLACKSSEFIMV-DPWEAN-QSTFQRTLTVLSRIKCSLESLKVMLVCGSDLLESFGIPGFWITEQVMAICRDYGVVCIRREGQDVEKIIIVVDDLVPNQISSTRVRECISRQLSVKYLMEDRVIDYIKRHHLYSN----------SER Ricinus_communis_255563474 MDV-----------------------------------------------------------------------------------------------------------MDKVINAVLVATGSFNPPTFMHLRMFELARDALRLRVIAAYMSPVTDAYKKPGLISGQHRLRMCNLACESSDFIMV-DPWEAN-QSSYQRTLTILRRIESFFGSLKVVLVCGSDLLQSFSIPGFWIPEQVRTICREYGVVCIRREGQDIEKTIKIVDELVPNLISSTRIRECISRGLSIKYLTIDGVINYIREQQLYMD----------IEK Populus_trichocarpa_224123176 MDP-----------------------------------------------------------------------------------------------------------MEKVINVVLVATGSFNPPTFMHLRLFELARDALQSHVIAAYMSPVNDAYKKAGLISGEHRLQMCSLACETSDFVMV-DQWEVN-QSTYQRTLTILQRVESSFESLKVMLVCGSDLLQSFSIPGFWNRDHVRTICSNYGVVCIRREGQDIKKIVKVTDDLVPNQISSTRVRECISRGLSIKYLTADGVIDYIREKGLYL-------------N Sorghum_bicolor_242066962 MEE-------------------------------------------------------------------------------------------------------VPLPREKLGGVVLVATGSFNPPTYMHLRMFELAKDELEQSVLGGYMSPVNDAYKKKDLLPAAHRIRFCELACKSSSFVMV-DPWEAM-QKGYQRTLTVLSRVRNSLGSLKVMLLCGSDLLESFSTPGVWIPDQVRTICKDFGVICIRREGKDVGTMIISVDEIVPNQISSSRVRDCIRRCLSIKYLTSDEVIEYIREHKLFME----------TTL Physcomitrella_patens_168067837 MNA--------------------------------------------------------------------------------------------------------PLPVEKLRRVVILAPGSFNPPTYMHLRMFELGRDALIAHVLGGYMSPVNDLYQKKGLAPAEHRIRMCELAVADSPFIMV-DSWEAK-QNTFQRTLTVMARIDTVVEKVKVMLLCGCDFLESFTTPGVWIPDQVRTLLQEYGIVCVNQDSKDARRLILVVDEVIQNSISATAIRRNLSRGLSVKYLTPDPVINHIKMNHLYTN----------NDE Physcomitrella_patens_168052241 MSS---------------------------------------MIADWNKVGRPN----------------------------------------------W--LKVMPLPMEKLSRVVLLAPGSFNPPTYMHLRMFELGRDALTAHVLGGYMSPVNDQFHKKGLASADHRIRMCQLAVCDSPTIMV-DSWEAK-QSSYQRTLTVLTRIEAAVEKVRVMLLCGTDLLESLTTPGVWIPDQVRALLQDYGIVCINRNGKDARRLILVVDEIIQNTISATAVRRNLARGLSVKYLIPDSVINHIKMHNLYMN----------QQP Physcomitrella_patens_168052243 MPL-------------------------------------------------------------------------------------------------------------KLSRVVLLAPGSFNPPTYMHLRMFELGRDALTAHVLGGYMSPVNDQFHKKGLASADHRIRMCQLAVCDSPTIMV-DSWEAK-QSSYQRTLTVLTRIEAAVEKVRVMLLCGTDLLESLTTPGVWIPDQVRALLQDYGIVCINRNGKDARRLILVVDEIIQNTISATAVRRNLARGLSVKYLIPDSVINHIKMHNLYMN----------QQP Selaginella_moellendorffii_302756067 --------------------------------------------------------------------------------------------------------------------VILVATGSFNPPTIMHLRMFELARNRLMSSVLGGYMSPVHDGYAKPGLALAEHRIQMCQISTADSPFIMV-DSWEAR-QPTRQRTVDVLARVDHCIGTVRIMLLCGVDLLATLEDASIWIPDHVERICRDYGIVCLSRDGQSIDKVQQKITLLSLKSLVFFLRRQSFERALSVKYLVHDGVIEYVKSHRLYN-----------YRE Volvox_carteri_302828098 MFG------------------------------------------------------------------------------------------------------HAALPTEKLTPLVLVCCGSFNPPTIMHMRMVDLAGDELMRDVWAAYLSPVADAYGKAGLAPAADRVAMCRLAAEASASGQV-YDWEAR-QPGYTRTLAVLRRPH---PPVRAMLLCGGDVLASMAVPGVWRDPDV--ILREHGVVCVAREGTDLEKLILVVYDRVGNSISSSKVREELAAGRPVRYLVPQSVLSYIYEKGLYGT----------VDN Chlorella_variabilis_307104732 --------------------------------------------------------------------------------------------------------------------VVLVSCGSFNPPTFMHLRMMELAQQQLMKDVLGSYMSPVNDAYWKQALAAGRHRVRMCQLATADSGGIMV-DSWEVE-QRQYTRTLFVLQRPAAGAVTPRVLLVCGADVLHSMADPTMWRQDLLETLLSNHGVVCVSRNGSDV-ARVTVVEEPVPNEISSSRVRHELEQGHSVRYLTPASVVRYIYDHGLYGT----------ERD Chlamydomonas_reinhardtii_159469087 LNP-----------------------------------------------------------------------------------------------------------TDKLTPVVLVAAGSFNPPTVMHLRMAELAADELLRDVWGVYFSPVADSYGKAGLAPAADRLQPLLLPDPEPDLVM--DGWEAA-QPGYTRTLAVLRRQQDRQRPVRAMLLCGADVLASMASPGVWRNPDV--ILREHGVVCIARAGSPLDGLVVLVYDHVGNSISSSAVRAELAAGRPVRHLLPAGVAAYIHARGLY--------------S Coccomyxa_subellipsoidea_545358533 MFP------------------------------------------------------------------------------------------------------ETVLPTDKLKPVVLLSCGSFNPPTYAHLRMFELAAQELTKDVLGGYMSPVHDAYSKKGLAPAEHRVAMCELAAGASPLIMV-DSWEAA-QKQYQYSLHVLQHLERAVTRVRSMLLCGADMVESLTVPGVWRPEHVRHILQDHGLVCIGRIHSDVRRLIVLVEDPIVNEISSTKIRSEMCQGHTVRYLLPDAVVDYIQKNELYC------------SM Cyanidioschyzon_merolae_544210593 MWV--------------------------------------------------------------------------------------------------------T------RVGVLLSAGSFSPPTLMHLLSLEQAREYVENPVWKGFLSPVHDAYQKPGLVAAKHRLQMCALAVKDSDWVQV-DAWEAQ-QPCYSPTFQVVQSLRERLPGPSVFLVCGADLVASMNNPSIWPVEHLQKLFALCEVVALPRPALDATDEIHYWKDPVQCNISSTLVRERVAHGRSIRYLTPRAVENYIWEHGLYRQ----------SAQ Galdieria_sulphuraria_545709277 MYG------------------------------------------------------------------------------------------------------VYTYTLYRFNGIVLVNCGSFSPITLAHLILMESAYNFAHYQVLGGYLSPVHDSYNKPGLITSRQRLEMCQLAVEDSSWLMV-DSWECC-RSEYSPTFLVVEHFRSQLVNIQLAFVCGSDLYRSLFNSDIWPKNHVERLLDMASLFVIPRMEDLSKSRVFIVDQAPLCQISSTMVRDTLRKGGSIKYMVPDSVYCYIIRHSLYHK----------SVS Porphyridium_purpureum_contig_3419.3 M------------------------------------------------------------------------------------------------------------------PALVLSCGSFSPPTVMHCLMMETARNHAVHRDVIGVVSPVNDAYRKPGLVAATHRVEMLRHALQRSAWVHV-NTWESE-QARFVRSHEVVSHVRAQLASMRVLFVCGTDVAVDILERRGWPEDSVQALLSKAELLIMPRPPSPAAQLIHVLTDAPVANISSTLARRMLRRGYSVKYVLDESVRQYIEEHGLYGR----------AGE Ectocarpus_siliculosus_298705733 MMSSQDV---------------------------------------------------------------------VQGSTRPSPECSN-----------G----AKDLPRARVSKVLIVGSGTFNPVHKIHIRRFYLARNYLEMRVVGGIV-PSHPTLVRAEIIPPKHRLSMARAAVGKGSWLAV-DSWEVTR-KRIMDYMSVLEHAKEVCGDITILYMCQASQVMGFP------------------------------------------------------------------------PTR--------------GCT Schizochytrium_aggregatum_Schag1_83217 MAR-----------------------------------------------------------------------------------------------------------------------RAFDAERLGV----------------PGRAVAV----------KEVERELCEEAAAA----------AAGT-EPARTGTWDVLQRLRRDHPDVDLVLILGADTLADLRA-GKWKC--GDRILAETDLAVFQRAGFDPI-T------PGLGPHSSTEARRVAEDRPSLHLHVLPEVEAYINEHDLYFA----------GEA Aplanochytrium_kerguelense_Aplke1_105217 MST---------------------------------------------------------------------------------------------------------------TMNVAIFGSSFNPPHNGHIAAFDE-----------VWVLPVYHAYSKSNLPTYEEREQLAKLAFDGIENV--VKPVEKDAEDFTMGSIDVIQYLKT--KDINFSWIIGADSYQDICA-GKWK--CGKELLEEVSMQVMDRKGYEPC-NTQFHNIPELPEISSTFIRSCSDES-ELQALVPKTIADVIVQRKLYGF----------GSC Aurantiochytrium_limacinum_Aurli1_32548 MSV---------------------------------------------------------------------------------------------------------------RRRVAIFGSSLNPPTGGHQSVVDHFAKL----MVLPVYAHVFD-SKRNSLEPFEHRVAMARLCFAPLEDV--VSTVERDLVEQRLGTYQVLTYLRS-LADTDFVLILGTDTFNDLCS-GKWR--NGPELLSTTEIAIIHREGYPMV-II-YEMGATSEGVSSTGARDACAAGDTMAKYLPLSVIEYIKEHKLYNF----------GAP Saprolegnia_diclina_530740957 MR-------------------------------------------------------------------------------------------------------------------VLLYGTSANPPCGGHTGIVEFFSSQ------QVWVLPVYHIYSKRNLAPFEHRLNLLRLAFQSLSQP--ACVKETEKSSIRIGSIDIVTHLQA--PDVEFSLLLGADTYNDLIQ-GKWK--GGLRLLDAVRIVVIAREGIALR-PVSYVHVPILDDSSSTQARSATSDD-ELRRLLFPQVLAYIQEHKLYQF-----------AH Albugo_laibachii_325192212 MR------------------------------------------------------------------------------------------------------------------RVLIYGLSANPPTGGHLGIIRHFQQR------EIWILPVYHMYEKSNLATLQHRVEMCQLAVAAIPQIS-VRVLETERSIRDVGTIDVIHHLRE--PLTRFSLLLGTDAFADLVA-GKWK--NGEEILQTIDIIVVQRPNSRHM-DIEFISVPGLQAISSTMARSCRDFQ-ELCKYVDRAVAEYIVKNSLYGF----------ASD Phytophthora_infestans_301120488 MTR-----------------------------------------------------------------------------------------------------------------EVLLFGLSANPPTGGHMGVVKHCQSM------EIWLLPVYHIYSKRQLAPFEHRVEMCRLALEALKNDGDLKVVEEEREDLRLGSIDLLDYLLD--EDTNFTLLLGGDTYADLLA-GKWK--RGNELMQLVKLLVVDRKGTDSP-RVTYINVPELSDVSSTMVRATADRA-ELARHLDPTVLDYIVQHKLYAF----------ATE Phytophthora_ramorum_JGI_2507661889 MTPLVDI---------------------------------------------------------------------VKDGSK-----------------------VIQY--LKVDVIVLVSSGAYNPIHMLHIRSFYVARQYVESPVVGAFI-PSHDTYVRREMITKRHRLALIETAVASSSWIEV-DKWEITR-RRVLDYLSTLTHVREMCYRFHVMYVCGCNTVVKLSHSALRD--------EGFGCITVCRPTQTDMVITIVELPCDLERATSFRVRQALANACNIEMMVGKPVFQYFVKHEIGDK----------TES Phytophthora_sojae_348676426 LLKLLEI---------------------------------------------------------------------VKDGSK-----------------------VIQY--LKIADSEAPASGAYNPIHMLHIRAFYVARQYVESPVVGAFI-PSHDTYVRREMITKRHRLALIETAVASSSWIEV-DKWEITR-RRVLDYLSTLTHVREMCYRFHVMYVCGCNTVVKLSHSALRD--------EGFGCITVCRPTQTDMVI----TTTIVEDT--GVLPCDL-RATSFRMMVGKPVFQYFMRHEIGEK----------TES Perkinsus_marinus_294890669 MPN---------------------------------------------------------------------------------------------------------------RKTVAVIGGSFDPPTLAHLMVASQVVQLG-----EAWMIPCGNRPDKDSQADVVTRLRMTQAAIEAVVPEE-CCDIEVV-NGSFIPTVFLMRRLRE--PDMTFRFVIGSDLPPTLL---EWD--HGDELIAENEFIVLPRPDSKPE-EVTANTALLTTDISSTAARNRLRELGGAVSIIPKQVRA--------------------QSA Plasmodium_berghei_68063625 MIY---------------------------------------------------------------------------------------------------------------NKKICIYGGSFDPATYGHEMVLSKISNLE-----EIWVVIC-RCRYDKNLEAFEHRNNMFSIMLENNKYPMKVKDLES---ENTTATYDLLNMLKK--PQYEFYFIIGSDLLNDLT---SWD--SGEQLVSENNFIVIERGDFDIN-DIEIPIKSFVNYISSTDVRKLLVKQNDLKKYINSMAINYINNNNLYKS----------YGK Plasmodium_knowlesi_193810136 MFN---------------------------------------------------------------------------------------------------------------NKHICIYGGSFDPITHAHEMVLTEVSNLD-----EIWVVIC-RCRDDKHLTEFQHRHNMFSLIMNNNSPKMLLKDIESK--ETTTPTYDLLKMLKE--PNYTFYFTIGSDLLNDIF---SWD--NGEQLVAENKFIIVERGNFKID-NIKIENMSFINYISSTDARKILSEKNDLQKYIHPVIINYIKEHDLYEN----------SST Plasmodium_falciparum_124513330 MH-----------------------------------------------------------------------------------------------------------------KNICIYGGSFDPITYAHEMVLDKISNLN-----EIWVVIC-RCRNDKSLTEFHHRHNMFTIIINNSSKIIKLKDLESH--SEMTPTYDLLKTQKE--PNYTFYFGLGSDLICDIF---SWD--EGEKLVLENAFIIIERGHFKID-SINIPKLSFINFISSSEARKFLTKENDIKKYIHPLTIDYIIKYNLYD------------FN Plasmodium_vivax_156099184 MKV-------------------------------------------------------------------------------G-------------------------------NKHICIYGGSFDPITHAHEMVLAEVSSLD-----EIWVVLC-RCRNDKHLTEFQHRHNMFSLIMNNNSPKMLLKDIECK--ETTTPTYDLLKMQKE--PNYTFYFTIGSDLLNDIF---FWD--NGEKLVAENNFIIVERGNFKID-NIKIENMSFINYISSSDARKMLSQKNDLQKYIHPVIINYIKEHDLYDN----------NSA Plasmodium_cynomolgi_457873656 MN-----------------------------------------------------------------------------------------------------------------KHVCIYGGSFDPITHAHEMVLAEVSSLD-----EIWVVLC-RCRNDKHLTEFQHRHNMFSLIMNNNSPKMLLKDIECK--ETTTPTYDLLKMQKE--PNYTFYFTIGSDLLNDIF---FWD--NGEELVAENNFIIVERGNYKID-NIKIENMSFINYLSSTDARKILSQKNDLQKYIHPVIINYIKEHDLYDN----------VRQ Plasmodium_yoelii_82752821 MLY---------------------------------------------------------------------------------------------------------------NKKICIYGGSFDPVTYGHEMVLSKISNLK-----EIWVVIC-RCRYDKNLEAFEHRNNMFSIMLENNKYPMEVKDLES---ENTTATYDLLNMLKK--PQYEFYFIIGSDLLNDLT---SWD--SGEQLVSENNFVVIERGDFDIN-DIEIPVKSFVNYISSTDVRKLLVKQNDLKKYINSIAIDYINDNNLYKS----------CGK Tetrahymena_thermophila_146165677 MEK---------------------------------------------------------------------------------------------------------------QKRIGILGGTFDPPTLSHIEIAKQSLLQH-----EVWIVPCGLRTDKITQTEPKHRLEMVSIAVKEVIEQNLTNDIEVK-NNRTIPTYPLMKRFEK--PEYDFYFLMGYDLIKGLL---SWD--QGQELVNEIKFIIAGQPNLEWK-FKLI---KIYENVRSTNYRKIIVESYLEAGLLSQNIINYIIQNNLYVQ-----------QI Theileria_annulata_65303484 MSA---------------------------------------------------------------------------------------------------------------MTNVLLFCGAFDPITTGHMIMLDLCIKTNF--FSEIRIMPSGKRTDKQYKVTDEHRTEMCKIAIDLFVNIS-ISDYELNL--KNVDTYFTMKHFNETETDKNFYFFMGSDILPQMFD---WL--VSHELIKIAHFLIAYREDFKIKQEEDQNQQTQTSSASSTEARNNL-NGHVIHNTIL---SSYILNL----------------VM Theileria_parva_71026135 MNA---------------------------------------------------------------------------------------------------------------VTNVLLFCGAFDPITTGHMIMLDLCIKTNF--FSEIRILPSGKREDKQYKAKDEDRTKMCQIAMDLFLKIN-ISDYELKL--NYVDTYFTLKHFNDTEPEKSFYFFMGSDLLPQMFD---WP--HSDNLVNIAHFLIAYREDFEIKQEWKNGQKTQTSPASSTQVRDTL-HGHKCGNLLHPDVMKYVEENKLYDY----------VVS Babesia_bovis_156087951 MEE---------------------------------------------------------------------------------------------------------------QMRVLLFAGTFDPITTGHLLMLRQCIETEF--FDEIWLLPSGKRTDKAFRVSDECRLEQCHIAIESLSKLS-ICDYEIKL--KNIDSYFTMVHFQQQYPEIDFYFFIGSDLLPQILS---WP--YGKEFVEITKLLVAYREGYPINQVKVKSRKMETSNASSTLARQQL-NCVKCDETLHPEIMHYIMENSLYGT----------QLT Giardia_lamblia_159108475 MPC---------------------------------------------------------------------------------------------------------------PPVVLVCMGCFDPVTRAHILLVEYAHDWLAHSITRILFSPAHDNYPYKRLAPSIHRVAMLRLAIAESHIMD-VDTGEAEC--QYQPTYAIVENLKQRYDGAQIYIVAGMDLLYSQCDERTWNPANVKRLYSLVSAVIVPRDGGAGGVSRILILNKSVSEISSTAAKEAL-RR--SGTMCVDSVQQYILNNALYSA----------SFQ Giardia_intestinalis_253742205 MT------------------------------------------------------------------------------------------------------------------ALIVFCGSFNPATKAHISIIDRAIDFINNGVYRVLVSPVNDKYPWKKLAPAKDRIKMLKLAIEDSRYQD-VNTYESLIQKDFTPTYDVLCHLKE--PDKNMYFLCGADLVESMTNATVWSVSSIEKIFDICKLLVAPRNLGTGF-KLFF-LPDVSLDCSSSDVREYCADSSKLARYVPFSIMAYIKKHHLYE------------VQ Spironucleus_salmonicida_558601652 M-------------------------------------------------------------------------------------------------------------------SVLLLPGSLNPITKAHIASLELAYNTLKNSIDKLIISPANSNYKQKHLVSGTHRVAMANLAIKNSHLFI-VDDFEALE--NFVPTFQLVNHLSKKY-NKKVILVGGSDLLLGMMNQNIWPEVNVRKLLNQCDLFIISRGVSVQSL-SIILIEESVGKESSTLFRA----G--CLDCCFDNVVQYAHTHQLYSF----------SEK Leishmania_infantum_146083652 MPP-------------------------------------------------------------------------------------------------------YALRTDKLQPVVLAICGSFNPIHNAHLKLYDAAKRSIDGVVLGGFLSPVGDAYRKPGLRSAADRLQIMRKALCHHPDLN-VDTWECQQ-PVYTRTFFVLQALEEHVRRVRVVFVCGADLFSSFWIPGCWQLRLLRQLLDSFHLVVVHREGARGCVRFTFATFSAPDDTSSTAVRAAAMELSRLRAMLPEAAVQSVVELYGE------------LTS Leishmania_major_157867676 MPP-------------------------------------------------------------------------------------------------------YALRTDKLQPVVLAICGSFNPIHNAHLKLYDAAKRSVDGVVLGGFLSPVGDAYGKPGLRSAADRVHIMRKALCHHPDLN-VDTWECQQ-PVYMRTFFVLQALEEHIRRVRVAFVCGADLFSSFWIPGCWQLRLLRQLLDSFHLVVVHRDGGRGCVRFTFATFSAPDDTSSTAVRAAAMELSRLRAMLPEAAVQSVVELYGK------------LTS Trypanosoma_cruzi_407838812 MSD-------------------------------------------------------------------------------------------------------YRFSGLKLRLALVAMCGSFNPIHLAHIAMYDAARDALMHVVVGGFFSPVNDHYGKEGLRPFAQRAAICKAALADHPSLA-VDEWEGLQ-PMYVRTVYVLDHLQKAAHPVSVVFVCGSDLFASFLRPGCWSLKLLKQLLDNFDVMVVRRACTNVGCERFMEVEIFANETSSSAVREALAADADISNLVPAGADSLIRAFYANN-----------QNC Trypanosoma_congolense_342181069 MTY-----------------------------------------------------------------------------------------------------------GSKLNIAVAVICGSFNPMHQAHIDMYNVVGDVLKELLVGGFVSPVNDRYEKEGLHSFTERAAVCEASLVNHPALS-VDRWEGLQ-PKYVYTVFVLEHMQQEVHPVLTIFVCGSDLFSSFLIPNCWQLPLLERLLDNFDVLVLRRSGTSGCKESFIESELLSSPITSTDIRERLLRDTDLVSLVPPTAIDLVRAYYGRG-----------ATQ Trypanosoma_brucei_72389282 MLL----------------------------------------------------------------------------------------------------FLLYRFFASKLCLVVAALCGSFNPMHKTHVEMYNLVEEVLKGLLVGGFVSPVNDGYEKEGLHSFEERVAVCDASLAGHPALS-VDRWEGLQ-PDFVNTFWVLDHIQRQVHPVRVLFVCGSDLSATFLIPGVWELPLLKRLLDNFGIVVYRRPGTPSWKESIIETDLLNSFISATDIRKQLLMEADLTAFVIPTAEELIRKFYGKE-----------SIS Leishmania_braziliensis_154335346 MLS-------------------------------------------------------------------------------------------------------YALRTDKLQPVVLVICGSFNPIHNAHLKLYDAAKRSIEGVVLGGFLSPVGDAYGKPGLRCAADRVQVMEKALCHHPELN-VDTWECQQ-PTYTRTFFVLRALEEHVRHVRVVFACGADLFFSFWRPGCWSLCLLRQLLDSFPLVVVQRGGARGNISFTFAAFSVPDDTSSTAVRNAVMELSRLRTMLPEAAIQLVVDLYGE------------LPS Trichomonas_vaginalis_154423037 MTS---------------------------------------------------------------------------------------------------------------EEIVLAFCGSFNPPTNGHLMAATIARDHMTDNVKATVFVPAHSGYIKPGILSGEQRAEMLEAMVAHTDYLSV-DRFEVQ-KNDWTRTIDTLLYLREKH-KCRIVLIVGIDIVESFET--KWREPDVKRILEEFGLCILPRVTEAVD--LYVVGSNPLNLVSSTLVRDEIKKGHHIVGLVDPAVAEIIAKNNYYK-------------D Buchnera_aphidicola_15617045 MK-----------------------------------------------------------------------------------------------------------------KLCAIFGGNFDPIHYGHINLAEKLAKDIS--IKKIILLPNNYPPHRNKQTSISDKIKMIKLAIHNNPLFE-ISYLETKK--NIFYTIDTLKKIRKKIHLEPLCFIIGEDNLQTFYLWK-----NWREILLYSHLLIYPRKHKKQKNDLIFFSHAPCINISSSRIRKNY-YGKNSHSLLPSIVNNYILLKKLYY-----------TNQ Cand_Riesia_pediculicola_295698311 MIR---------------------------------------------------------------------------------------------------------------YKIQLLYGGTFDPIHLGHLSIIKHLSKVLK--LEKCIILPNRALP-NLPVANIQQRLKMIQLALKNNSSFQ-IDLREIRK-KNFSYTIDTLYSFRNQIWKKPLGFVIGEDVLYSIHT---WF--NWKKILKICNLLVFRRNREKKSSLVYFVN-NPCLSISSTEIRMRKMQKKSCRNLLPDDVLKYINENRIYQ-------------K Lamprocystis_purpurea_521993334 M--------------------------------------------------------------------------------------------------------------------IGILGGTFDPIHLGHLRPALDCLESLR--LDQVRFIPNVAV-HRQPEAPATLRLAMLEAAIAGQPEFV-ADTRELER-PGGSFSYDTIQSLRAELMQVPICLLVGGDAFRGFLD---WY--RPREILELAHLVVMHRPGVGRILEILFHE-VTQVDIASTRIRALMRQGLSPRYLVPDPVFDILREAGLYRP----------AEH Xanthomonas_oryzae_188577783 M----------------------------------------------------------------------------------------------------------------------------------HLV----PA---------------ADPPHRAPGATAAQRAQMLQLALSDYPGLQ-LDTRELQR-DAPSYTVDTLRALRAELSAAPIAWLLGADAFVGLDH---WH--AWQALFGLAHFVVAARPGTTLELALYLLH-QPLRGESASAVRSRIATGAEWQALVSPPVAAMIQREGLYRS----------PAS Legionella_drancourtii_493928026 MH------------------------------------------------------------------------------------------------------------------SIAIFGGTFDPIHNGHLQTSLNIQAHFQ--FDTYIFLPCKIPTIKPAFANNQQRVKMIELAIKDYPTLK-IDLREIER-NTPSYMVETLESFRLEYPEAAITLIMGYDSFISLPH---WY--QWEKLITLANILVINRDEFAKQEIVFLFD-AGHYVISSTAIREEIRLKKDVSLKLPREVCQYIKDEGL---------------Y Pseudoalteromonas_sp_494620031 M--------------------------------------------------------------------------------------------------------------------IAIFGGTFDPVHLGHINMAQQCVNTFN--LNTLYFMPCALPAHKAPGISTQHRINMLNAAIAPYPHFK-LDLRELNR-AGPSYSLLSLQELRKEHPTTPILFLIGMDSFNNLDK---WF--EWKAITQLCHIVVYQRPAQHCTASLYFLP-GKMLDAASSTIREQLKKSNKKNELLPAAVSHYIEQHQLYQI-----------DA Bermanella_marisrubri_494076806 MS------------------------------------------------------------------------------------------------------------------EFVAFGGTFDPVHFGHIISARDVAQQMG--YQQVHLVPCGDAYHKGALTHSTHRLAMLEQALAEEPWLL-ADGRETRR-EGATYTIDTLKDLRSELPDAHIAWVMGSDTADQLTS---WH--NWRSLFELANVIVVRRAHESRPNLALELE-LTPVDISSTDVRCRLKNHQSVADLVPPSVLKYINTLGLYR------------ES Halomonas_elongata_307544784 MAR---------------------------------------------------------------------------------------------------------------PPRIAMLGGTFDPVHLGHLRSAVELREALA--LDRVHMVPAARSPLRAPQVAPEDRLALLRLGIGDTPGLI-ADAREFSR-RGPSYSADTLAELRDAYSEARLVMALGHDAFMRLAE---WR--EPHRLFELAHVVVIDRPDHEAPLPLLRLL-PSRMAISATEVRRRLARGDSVRYLLPEAVESHVLAQGLYRE----------EGR Oxalobacteraceae_bacterium_522193879 MV-----------------------------------------------------------------------------------------------------------------YRTALLGGSYDPVHHGHVALGAHFAQLLQ--VDQLRVIPAGLPWQKTLKATPRQRAEMVALAFAGAYDVV-VDLQEIER-GEQTYTIDTLRQVRAELPSASISFLMGADQLQRLDT---WH--EWQALFDYAHICVAARPGFNLATATYLAQ-DFAVDISATEIRAALQRGDSANSLIPPLVLDYIEQHNLY-------------KS Cycloclasticus_pugetii_519006632 MA-----------------------------------------------------------------------------------------------------------------KFIGIYGGTFDPIHLGHLTAASAVQKEIG--LDEVRMVLSANPPHRAPVLSAEQRFSLLKLAVREYPSLV-ADSCEMER-SGPSYMVDTLSDFRRKY-NDSLVLVLGMEAFNGLMS---WH--RWEELIKLTHIVVTDRAGFDNQFEIYCQS-VKPLDISATQIRQRIKDKKTVKEMLTSQCLDVINKNSFY--------------R Cand_Vesicomyosocius_okutanii_148244464 MQK---------------------------------------------------------------------------------------------------------------FKIIGFFGGSFDPIHYGHLKNAAQLKDKLR--LSKLFLMPCDKPVHKQLNFSINQRIDMLHLAIKEFNTLS-IDTREIKQ-NKNSYTINSLKYIQSKYQNNSICLIMGMDSFNTLSS---WE--ECQNFYQYCHLVIMSRPGILTYQKIFFAN-NQMLNISSSTIQGKIKSQKNLSGLLPDSIINYINA------------------L Hippea_alviniae_550921245 M-------------------------------------------------------------------------------------------------------------------RIAIFGGTFNPVHIGHIRGAISVYETFK--LDKVIFLPTGIPPHKDNVANAEYRYTMLKLAIEGLKFCE-ISRLEIDS-NRVNYTIDTIGELKKELKEDNLFFVVGTDAFYYLNL---WK--DYKRLVDEITFIVIRRPEYDTKIIVYIYT-PPAFDVSSSMIRRKIRNGECIKYLVPEKVENFIKEKRLY--------------Q Gayadomonas_joobiniege_516014004 MSK---------------------------------------------------------------------------------------------------------------YALRLYLGGTFNPIHNGHLHGAIQALESCQ--AEQLFLLPNYLPPHKAPNETAVQRQKLCELSLSIDHRLR-LDDRELQR-SKACYTIETVQILHATY-NEAIGFVIGMDSLQQLAT---WH--QWQQLTDFCHLIVLQRGGYQLELPVFIVD-SPLLEISSSEIRARVKAGLNSTCLLPPAVNQYIIEHDLY-------------ST Veillonella_parvula_490831099 MVD---------------------------------------------------------------------------------------------------------------KRRIGIIGGTFNPIHLGHLMIAEVACESFN--LEKVIFVPARIPPHKHDVIDSHHRYAMTAAAVSDNPNFE-ISDVEMRR-EGPSYTVDTIQYFKKLYPTVEFYFIAGTDTIRALPT---WK--FIDELIDEVHFIGATRPDGSSAIDIHVME-VPEMKLSATYLRERLRSGKTVRYMLPKCVVDYIEENHIYG------------KE Alteromonas_macleodii_407699945 MSL---------------------------------------------------------------------------------------------------------------PAVKAILGGTFNPPHKGHISAALKAADEIG--VNVVHLMPCKLAPHK-VGVSETHRVKMIELCAENNDRLI-PELIELTL-PSPSYTVKTLRALKQK--DETICFFIGADSLYNLDK---WY--EWEHLLDYCHLVVMRRDDEQFSPPVVLTS-TPLYSVSSTEIRDVLANARSSDLWLEESVLEYINEHQLY-------------KS uncultured_bacterium_406979593 MQI----------------------------------------------------------------------------------------------------------------QPIGIFGGTFDPIHFGHIHLANKMLQLCN--LQKIILIPCSQSPLRQPIASTEDRLNMAMLAIEGMAHFF-TDNREIKR-AGISYAIETLKSLRQEN-NTPLALIMATDVFNRFDE---WH--EWQKILDFTHLLIAKRPEVGQITNIYLAN-INPLPITATEIRALIKQQKDASHLVAPDVWQYICKNHLY--------------I Clostridium_tetani_28211675 MK------------------------------------------------------------------------------------------------------------------KKAIFGGTFDPIHNGHLHIAYKALNRLK--LDKIIFIPSGNPPHKECITDKNIRYNMVKYAIEQEDKFE-ISDYEVKK-KGKSYTYETIEHFRKYH-NIDLYFIAGADCLMDIHK---WK--NIDSMMEKAKLVVFSRPGFSMDTIIIFLD-IPLLDVSSTEIREKIKKGEDIKDLIPEKTYNIIKKYGLY--------------R Desmospora_sp_497395288 MKK---------------------------------------------------------------------------------------------------------------GKKIGIYGGTFDPIHIGHLIMAEQARQAAG--LEEVRFVPAPTPPHKGVSASAEDRFAMVERAVEDHPSFR-VSRVEMDR-SGPSYTADTVRLLCREE-DTRFFLIVGADMVLDLPR---WV--RIEEILASVEVIGLMRPGVKLDMGTWVRE-GVSMNLSSTWIRERVAAGGSVRYLVPEPVRQYMEEHRLYE------------TR Aminicenantes_bacterium_551142562 MKT----------------------------------------------------------------------------------------------------------------ERIGLFGGTFNPIHSGHIRAIEIVQKKFS--LDKILIIPSYIPPHKNGIASPKNRLKMVKLAACSSSIFV-PSSIEIEE-KTKSYSIITLNKIKNLY-NAYIFFILGIDAFLEIHT---WK--DYEKVLDQCFFVVVSRSGYKLEDAIFLLP-IPGLDITSSEVRGRIKKGGSIDGLVPEAVKNHIKNKKLY--------------K Psychromonas_ingrahamii_119944941 MDI---------------------------------------------------------------------------------------------------------------QQAIGFLGGTFDPIHFGHLRPALEITEALS--LQQLFIMPNHIAPHKASHASARQRSEMVELAISHQARMT-IDKRELKR-HKPSYTIDTLKELKIEY-NTPICFIMGMDSLISFDK---WF--DWKSILSYCHLIISHRPGWQNKFNIYFQA-TSQLAISSTEIRTLLNQDISIDFLTPDSVINYIKEQHLY--------------K Spiribacter_sp_554595317 ---------------------------------------------------------------------------------------------------------------------MALLGGTFDPVHYGHLRPAVELLEALC--LAEIRLVPGHVPPHRQPRLDAPARAGLLDTAVAGIPGLV-VDRCELDR-PGPSYTVDTLEHLRRSLDQRPLCFIMGWDAFRGLMR---WH--QWQRLAALAHLVVVTRGGDTQALAVLFQA-VSRLEISATGIRRCLALGYSAQGLMPDAVWHELALRGCYGY----------RHV Methylotenera_mobilis_518740026 M------------------------------------------------------------------------------------------------------------------KTIGIFGGTFNPIHYGHLRMAQELAVGLN--IDSIRFIPSANPPHKTHNISASHRAAMVDLAIANNPLFH-LDDQELKR-TGHSYTIDTLQNLRDELHEVSIILLMGSDAFTQFDT---WH--RWQEIIMLCHIAMVQRPQASKIEPITMRQ-ITALDISSTAIRDAFQHSKSARYLMPDSVIDYIQTHQLY--------------K Gilvimarinus_chinensis_519052214 MR-----------------------------------------------------------------------------------------------------------------RKIAVFGGTFNPIHHGHLRLALDLVQQVG--FDQMRMVPCHIPMHRDPSVASRRRARMVELAIADSPTLT-LDTRELER-GSASYSVDTLAELRAEQEDASIALIMGLDAYQGLMR---WH--RWDELLQLGHLVVVDRPGYQMPASVVHLD-IRALDISATEIRTLTAQGLSTRYLLPETVRRYIAERGLYG------------AG Psychromonas_sp_470478781 MPL---------------------------------------------------------------------------------------------------------------QQAIGFLGGTFDPIHFGHLRPALEVCERVN--LQTLFLLPNHIAPHKSAQCSATRRAHMVRLAIKAQPKLR-IDTRELNR-AQASYTIDTLKELKQDY-HTPICFIMGMDSLLSFDS---WH--QWQDILNYCHLIVCHRPGWKCDFNIYFQE-TTQLEVSSSQIRDALQQHRSIDYLLPNSVIDYIKTQQLYKN----------TPD Methylomicrobium_alcaliphilum_357405202 --------------------------------------------------------------------------------------------------------------------MIGIYGGTFDPIHFGHLRTALEVKEIFA--LDEIRLIPCFIPPHRSPSAPASMRLRMLELALEDRTNMT-VDTREIDR-GGPSYMVETLMSLRAEI-ERPLLLFIGADAFTGLTA---WY--QWQRLFEFAHVVVMTRPGFNTQT-LFFQS-VTRLEISATAIRQIIAKHRDPGFLLPESVIQYIRQHKLYQ-------------R Halomonas_lutea_517847798 MGM---------------------------------------------------------------------------------------------------------------HARVAMLGGTFDPVHLGHLRSAVELYEALK--LDKVLMVPARVPPHRAPGVSAADRLAMLEAGIGDTSGLV-ADGRELLR-EGPSYSVDTLAQLRVELESARLVMVVGHDAFLKLAE---WH--APERLFDFAHVVVIERPGHAAELPLRLAL-PSRMAISATEVRQRLSDGQSIRYLVPERVESFIQTRNLY--------------R Marinobacterium_rhizophilum_522174335 MSS---------------------------------------------------------------------------------------------------------------NEALVFMGGTFDPVHNGHLRTALEIQQWMG--VEQVCLIPSNTPVHRQPGCSPEQRLAMVRLAVEHEPALC-VDAREVLS-EKPSYSLLTLQSLRAEIPDRPLCMVLGMDAYLGLPS---WH--GWEQLTDCCHIIVVCRPGYVYEPDVLMHE-LTPLSISATQIRQLVAKGLSPRYLCPDPVWHYMQQHKLYVI----------EDS Methylotenera_sp_519028046 M------------------------------------------------------------------------------------------------------------------QRIGVFGGTFNPIHYGHLRIAQEVAEAFA--LSQVKFLPAAKPPLKEPDVAAKHRAEMVQLAIAANPLFH-LDTRELER-IGLSYTIDTLISLHAE-PQDALCLIVGTDAFARFDQ---WH--RWQSVLEYCHLIVVSRPHGGSLINIAIHD-VTALDISSSQIRGLIRTQKNPAYLCPQAVIGYIQQHGLYR-------------D Rhodanobacter_sp_495486361 M------------------------------------------------------------------------------------------------------------------KPLAILGGTFDPVHIGHLNAAWEAAELLD--A-EVRLMPANVPPHRPPVASAEQRVAMLRAALQGQSRLS-LDTRELQR-EGPSYTVDTLVELRAE-GDRPLVLLLGEDAFAGLPS---WH--RWHELFELAHMGVLTRPGVEPTWPVVLMP-ITPLEISATRVRELLGAGWQPRYLLPGGLLDSVALLAPYR-------------R uncultured_bacterium_406999011 MP-----------------------------------------------------------------------------------------------------------------EPLGLFGGTFDPIHFGHLRLAEEAIAHLG--LAGVRWIPAGQPPHRQPEVTGKQRLEMVLRSTAENARFF-VDASEVEA-AAPSYTVNTLERLRDELAEQSLVLLVGADAFAGLST---WH--RWQDIFALAHIAVSHRPGFPIEISIVSFA-MTQLAISATQIRKLLANGLSARYLLPDSVLDYIQRHQLYRN-----------RL Xenorhabdus_bovienii_290476194 MLH---------------------------------------------------------------------------------------------------------------PIIQALFGGTFDPIHYGHLRPVEALAKQVG--LKQVILLPNHVPPHRQPEATASQRLEMVRLAVQDNPLFT-VDTRELER-QTPSYTIETLKSFRQEVEQRPLAFIIGQDSLQSIHT---WY--KWEELLGICHLLVCSRPGYQSQLSIYLAT-TPLLNISATDIRQRHQQGLSCDDLLPPAIQNYVNSQGLYR-------------Q Halomonas_zhanjiangensis_517747105 MSS---------------------------------------------------------------------------------------------------------------PIKIGMLGGTFDPVHHGHLRSALEVREALG--LDRLHMIPAPKPPLRAPQVSAEQRLALLKAGIGDTPGLY-ADDRELRR-EGPSYSIDTLAQLRAEYEQARLVMVIGFDAFLRLHQ---WH--RASDLFSLAHLVVMARPGYQMPWTLTLSL-PSMMAISATYIRQRLREGKSIHYLLPNAVEEAIRKNGFYQH----------HDE Escherichia_coli_487633144 MK-----------------------------------------------------------------------------------------------------------------SLQALFGGTFDPVHYGHLKPVETLANLIG--LTRVTIIPNNVPPHRQPEANSVQRKHMLERAIAEKPLFT-LDERELKR-NAPSYTAQTLKEWRQEQPDVPLAFIIGQDSLLTFPT---WY--EYETILDNAHLIVCRRPGYPLEMAIYLAE-TPWFNISATIIRERLQNGESCEDLLPEPVLTYINQQGLY--------------R Hahella_ganghwensis_521078440 MP-----------------------------------------------------------------------------------------------------------------SPLVVLGGTFDPVHHAHLRTALEIQQLLG--NDTVHLMPSGDPRHRAPHASALHRLEMLKLAVSGESRLV-VSDMEVKR-TGATYTVDTLEELRAKEPDRPIIFVMGGDAFLSLPK---WH--RWVEIIRLAHIMVINRPNWSNIGQIAECA-LTQLDISSTQVRTLLKAGQSPRFLIPDLVLDYIRSHHLYGS----------TDA Firmicutes_bacterium_547821648 M-------------------------------------------------------------------------------------------------------------------KIGIMGGTFNPIHNAHLLIAEMAREEYG--LDRVIFITDGNPP-HSANVTAKQRFEMTHIAIADNSAFE-EDDFEINR-SEKSYTVNTLGYLKEKYPNNDLFFIIGEDSLNDFDK---WY--KPDKILEMCSLLVFPRKSLKSLTEIFPIS-APVFRISSTDIRNRVKNGQTVRYMLPENVRDYINKYHLYKE----------NDR Cand_Kuenenia_stuttgartiensis_91202924 MM------------------------------------------------------------------------------------------------------------------NIGIFGGSFNPIHIGHLIVAEEVFQQRK--LSKILFIPTGISPKEGGLIDSFHRYEMVKQAIGDNEHFE-VSDIEIKR-PGKSYTIDTIKILRETYPGSNLFLILGTDMINEINT---WK--DIEELSCMCHFIVVNRFPITLNGEKLMVQ-IPSLDISSTEIRKKLSKGLSIKYLVPERVENYIRKHSLYA------------KR Pedobacter_arcticus_515829424 MRH-------------------------------------------------------------------------------------------------------S--NTSFYKLKIGLLFGSFNPIHTGHLIIASYLANHTA--LDKVWLVPHNPLKEKKDLIQVYDRLEMAKLATEDAENIM-VSDIELKL-PQPSYTIDTLTHLRELY-EHEFTLIMGSDNLKSLKK---W--KNYELILRDYKIYVYPRPGYENSELVTITET-PLMELSSTFIRKSISAEKSVKYFLPDEVIAFIESKGLY--------------K ; END; BEGIN TREES; Title 'Bayesian Tree of Nicotinate-Nucleotide Adenylyltransferases'; LINK Taxa = Taxa; TRANSLATE 1 Homo_sapiens_18652051, 2 Mus_musculus_57527870, 3 Danio_rerio_528518142, 4 Nematostella_vectensis_156405737, 5 Ciona_intestinalis_459173389, 6 Strongylocentrotus_purpuratus_390336005, 7 Oikopleura_dioica_313242099, 8 Aplysia_californica_524866320, 9 Lepeophtheirus_salmonis_225712656, 10 Daphnia_pulex_321453246, 11 Caligus_rogercresseyi_225709256, 12 Branchiostoma_floridae_260830087, 13 Caenorhabditis_elegans_71997862, 14 Brugia_malayi_170589299, 15 Ascaris_suum_541047205, 16 Capitella_teleta_443691813, 17 Echinococcus_granulosus_556515322, 18 Loa_loa_312066533, 19 Lottia_gigantea_556108217, 20 Drosophila_melanogaster_19528069, 21 Acyrthosiphon_pisum_328720850, 22 Trichoplax_adhaerens_196009472, 23 Ajellomyces_dermatitidis_261205294, 24 Aspergillus_niger_145244667, 25 Aspergillus_oryzae_169769204, 26 Aspergillus_nidulans_67522577, 27 Ashbya_gossypii_302309350, 28 Debaryomyces_hansenii_294655955, 29 Coccidioides_posadasii_303311669, 30 Saccharomyces_cerevisiae_6323360, 31 Schizosaccharomyces_pombe_429241520, 32 Scheffersomyces_stipitis_150951341, 33 Meyerozyma_guilliermondii_146423687, 34 Neosartorya_fischeri_119470062, 35 Penicillium_chrysogenum_255932279, 36 Cryptococcus_neoformans_405121504, 37 Ustilago_maydis_71024819, 38 Mortierella_verticillata_MVEG_05231, 39 Allomyces_macrogynus_AMAG_17335, 40 Spizellomyces_punctatus_SPPG_01224, 41 Neurospora_crassa_85086139, 42 Monosiga_brevicollis_167526969, 43 Salpingoeca_sp_326431706, 44 Entamoeba_dispar_167380300, 45 Entamoeba_histolytica_67472722, 46 Entamoeba_invadens_471208618, 47 Dictyostelium_fasciculatum_328874203, 48 Dictyostelium_purpureum_330845458, 49 Dictyostelium_discoideum_66805693, 50 Polysphondylium_pallidum_281208603, 51 Arabidopsis_thaliana_42568561, 52 Glycine_max_571506330, 53 Vitis_vinifera_296089926, 54 Ricinus_communis_255563474, 55 Populus_trichocarpa_224123176, 56 Sorghum_bicolor_242066962, 57 Physcomitrella_patens_168067837, 58 Physcomitrella_patens_168052241, 59 Physcomitrella_patens_168052243, 60 Selaginella_moellendorffii_302756067, 61 Volvox_carteri_302828098, 62 Chlorella_variabilis_307104732, 63 Chlamydomonas_reinhardtii_159469087, 64 Coccomyxa_subellipsoidea_545358533, 65 Cyanidioschyzon_merolae_544210593, 66 Galdieria_sulphuraria_545709277, 67 Porphyridium_purpureum_contig_3419.3, 68 Ectocarpus_siliculosus_298705733, 69 Schizochytrium_aggregatum_Schag1_83217, 70 Aplanochytrium_kerguelense_Aplke1_105217, 71 Aurantiochytrium_limacinum_Aurli1_32548, 72 Saprolegnia_diclina_530740957, 73 Albugo_laibachii_325192212, 74 Phytophthora_infestans_301120488, 75 Phytophthora_ramorum_JGI_2507661889, 76 Phytophthora_sojae_348676426, 77 Perkinsus_marinus_294890669, 78 Plasmodium_berghei_68063625, 79 Plasmodium_knowlesi_193810136, 80 Plasmodium_falciparum_124513330, 81 Plasmodium_vivax_156099184, 82 Plasmodium_cynomolgi_457873656, 83 Plasmodium_yoelii_82752821, 84 Tetrahymena_thermophila_146165677, 85 Theileria_annulata_65303484, 86 Theileria_parva_71026135, 87 Babesia_bovis_156087951, 88 Giardia_lamblia_159108475, 89 Giardia_intestinalis_253742205, 90 Spironucleus_salmonicida_558601652, 91 Leishmania_infantum_146083652, 92 Leishmania_major_157867676, 93 Trypanosoma_cruzi_407838812, 94 Trypanosoma_congolense_342181069, 95 Trypanosoma_brucei_72389282, 96 Leishmania_braziliensis_154335346, 97 Trichomonas_vaginalis_154423037, 98 Buchnera_aphidicola_15617045, 99 Cand_Riesia_pediculicola_295698311, 100 Lamprocystis_purpurea_521993334, 101 Xanthomonas_oryzae_188577783, 102 Legionella_drancourtii_493928026, 103 Pseudoalteromonas_sp_494620031, 104 Bermanella_marisrubri_494076806, 105 Halomonas_elongata_307544784, 106 Oxalobacteraceae_bacterium_522193879, 107 Cycloclasticus_pugetii_519006632, 108 Cand_Vesicomyosocius_okutanii_148244464, 109 Hippea_alviniae_550921245, 110 Gayadomonas_joobiniege_516014004, 111 Veillonella_parvula_490831099, 112 Alteromonas_macleodii_407699945, 113 uncultured_bacterium_406979593, 114 Clostridium_tetani_28211675, 115 Desmospora_sp_497395288, 116 Aminicenantes_bacterium_551142562, 117 Psychromonas_ingrahamii_119944941, 118 Spiribacter_sp_554595317, 119 Methylotenera_mobilis_518740026, 120 Gilvimarinus_chinensis_519052214, 121 Psychromonas_sp_470478781, 122 Methylomicrobium_alcaliphilum_357405202, 123 Halomonas_lutea_517847798, 124 Marinobacterium_rhizophilum_522174335, 125 Methylotenera_sp_519028046, 126 Rhodanobacter_sp_495486361, 127 uncultured_bacterium_406999011, 128 Xenorhabdus_bovienii_290476194, 129 Halomonas_zhanjiangensis_517747105, 130 Escherichia_coli_487633144, 131 Hahella_ganghwensis_521078440, 132 Firmicutes_bacterium_547821648, 133 Cand_Kuenenia_stuttgartiensis_91202924, 134 Pedobacter_arcticus_515829424; TREE Tree1 = (((((((((((((((((((28:0.09548,33:0.035987)0.5400:0.018391,32:0.072658)1.0000:0.104994,30:0.109095)0.6100:0.042386,27:0.130554)1.0000:0.10356,31:0.151845)1.0000:0.070207,(38:0.168926,(36:0.264218,37:0.247955)0.7900:0.053748)0.9700:0.087118)1.0000:0.083731,39:0.226705)0.8400:0.044758,40:0.270603)0.9800:0.068603,(41:0.214866,(29:0.045115,(23:0.073392,(34:0.005712,((24:0.02261,26:0.119351)1.0000:0.036696,(25:0.027951,35:0.037276)0.9800:0.013736)1.0000:0.017951)1.0000:0.041776)1.0000:0.042237)1.0000:0.127569)1.0000:0.101709)1.0000:0.186192,((47:0.225767,50:0.265392)1.0000:0.095532,(48:0.150534,49:0.26429)1.0000:0.126928)1.0000:0.229656)0.3800:0.055918,(42:0.289429,43:0.264965)1.0000:0.291138)0.4200:0.088129,((((61:0.129964,63:0.225567)1.0000:0.22671,62:0.328922)1.0000:0.112322,64:0.284375)0.9800:0.109894,(((58:0.004696,59:0.0105)1.0000:0.084037,57:0.116534)1.0000:0.14813,(60:0.44108,(56:0.196647,(51:0.128079,((52:0.095961,53:0.131522)0.7100:0.015016,(54:0.105333,55:0.095946)1.0000:0.074611)1.0000:0.047122)0.5600:0.033747)1.0000:0.151406)0.5800:0.039618)1.0000:0.117145)1.0000:0.190326)0.5800:0.063132,((((14:0.033386,18:0.027596)1.0000:0.210473,15:0.111148)1.0000:0.27323,(7:0.541827,13:0.321926)0.6500:0.111876)0.9600:0.131755,((17:0.474049,22:0.253177)0.7900:0.074521,(6:0.277529,((1:0.067981,2:0.053262,3:0.211772)0.9800:0.079941,((4:0.253887,12:0.19211)1.0000:0.09534,(((16:0.184376,19:0.190542)0.8400:0.040241,8:0.221667)1.0000:0.054532,(5:0.429352,(10:0.261871,(20:0.333073,(21:0.274249,(9:0.084811,11:0.114262)1.0000:0.239999)0.7300:0.113596)0.4700:0.054044)0.4900:0.05271)0.7700:0.071969)0.6800:0.031686)0.6900:0.051254)0.2900:0.03434)0.5000:0.053392)0.5500:0.066292)0.8900:0.10465)0.8800:0.121552,(((75:0.054296,76:0.118226)1.0000:0.510829,68:0.530966)1.0000:0.772859,(((44:0.015462,45:0.045307)1.0000:0.131447,46:0.20298)1.0000:0.471851,(((91:0.012424,92:0.032097)0.9700:0.060607,96:0.084125)1.0000:0.466989,(93:0.282241,(94:0.137441,95:0.267494)1.0000:0.227534)0.9900:0.196269)1.0000:0.509772)0.5200:0.050764)0.9200:0.084147)0.8700:0.124127,(66:0.5453,(65:0.394109,67:0.622242)0.8900:0.095408)0.9800:0.14088)0.8800:0.150609,(89:0.638122,(88:0.597581,90:0.667469)1.0000:0.264367)0.9500:0.171966)0.8600:0.134507,97:0.842171)1.0000:0.310241,((((((73:0.485462,74:0.244683)0.5400:0.087616,72:0.488076)0.9900:0.128493,70:0.54551)0.9900:0.165837,71:0.556724)0.8900:0.176822,69:0.857803)1.0000:0.358518,(((((85:0.167228,86:0.156698)1.0000:0.32233,87:0.268765)1.0000:0.555814,84:0.586575)0.7700:0.167487,77:0.590389)1.0000:0.240755,((78:0.025691,83:0.027467)1.0000:0.244452,(80:0.245029,(79:0.020035,(81:0.022145,82:0.03742)1.0000:0.053706)0.9800:0.110839)0.7400:0.099552)1.0000:0.544703)0.9900:0.246017)0.9800:0.179723)1.0000:0.0191405,(134:0.643584,((111:0.454712,115:0.573127)0.9900:0.149693,((((109:0.517748,116:0.468416)1.0000:0.15577,133:0.372856)0.7200:0.078318,114:0.493008)0.5400:0.121149,(132:0.512823,((((((103:0.577214,112:0.640197)0.8300:0.181849,108:0.640684)0.7600:0.08848,110:0.688177)0.5100:0.069619,(117:0.211222,121:0.21304)1.0000:0.236304)0.6200:0.103124,((98:0.617139,99:0.514399)1.0000:0.219399,(128:0.187801,130:0.359335)0.8600:0.078476)1.0000:0.210451)0.8900:0.107421,(113:0.675955,((119:0.370613,125:0.319473)0.9900:0.117984,(100:0.464454,(127:0.402573,(((((105:0.201136,123:0.17223)0.9900:0.111406,129:0.229666)1.0000:0.298884,(118:0.590833,120:0.397995)0.4000:0.084047)0.6000:0.104375,(101:0.442972,106:0.566281)0.7100:0.166945)0.4500:0.071504,(((102:0.738766,122:0.26998)0.8400:0.148121,107:0.535085)0.6400:0.090067,(126:0.412906,(124:0.487133,(104:0.615002,131:0.35076)0.7300:0.152067)0.5100:0.064527)0.4100:0.05827)0.2900:0.078959)0.6000:0.081009)0.5100:0.065386)0.4700:0.07337)0.5000:0.103597)0.7700:0.096047)1.0000:0.231654)0.8900:0.109114)0.4300:0.080572)1.0000:0.185256)1.0000:0.1427675); END; BEGIN ASSUMPTIONS; TYPESET * UNTITLED = unord: 1 - 322; END; BEGIN TREES; Title 'ML Tree of Nicotinate-Nucleotide Adenylyltransferases'; LINK Taxa = Taxa; TRANSLATE 1 Homo_sapiens_18652051, 2 Mus_musculus_57527870, 3 Danio_rerio_528518142, 4 Nematostella_vectensis_156405737, 5 Ciona_intestinalis_459173389, 6 Strongylocentrotus_purpuratus_390336005, 7 Oikopleura_dioica_313242099, 8 Aplysia_californica_524866320, 9 Lepeophtheirus_salmonis_225712656, 10 Daphnia_pulex_321453246, 11 Caligus_rogercresseyi_225709256, 12 Branchiostoma_floridae_260830087, 13 Caenorhabditis_elegans_71997862, 14 Brugia_malayi_170589299, 15 Ascaris_suum_541047205, 16 Capitella_teleta_443691813, 17 Echinococcus_granulosus_556515322, 18 Loa_loa_312066533, 19 Lottia_gigantea_556108217, 20 Drosophila_melanogaster_19528069, 21 Acyrthosiphon_pisum_328720850, 22 Trichoplax_adhaerens_196009472, 23 Ajellomyces_dermatitidis_261205294, 24 Aspergillus_niger_145244667, 25 Aspergillus_oryzae_169769204, 26 Aspergillus_nidulans_67522577, 27 Ashbya_gossypii_302309350, 28 Debaryomyces_hansenii_294655955, 29 Coccidioides_posadasii_303311669, 30 Saccharomyces_cerevisiae_6323360, 31 Schizosaccharomyces_pombe_429241520, 32 Scheffersomyces_stipitis_150951341, 33 Meyerozyma_guilliermondii_146423687, 34 Neosartorya_fischeri_119470062, 35 Penicillium_chrysogenum_255932279, 36 Cryptococcus_neoformans_405121504, 37 Ustilago_maydis_71024819, 38 Mortierella_verticillata_MVEG_05231, 39 Allomyces_macrogynus_AMAG_17335, 40 Spizellomyces_punctatus_SPPG_01224, 41 Neurospora_crassa_85086139, 42 Monosiga_brevicollis_167526969, 43 Salpingoeca_sp_326431706, 44 Entamoeba_dispar_167380300, 45 Entamoeba_histolytica_67472722, 46 Entamoeba_invadens_471208618, 47 Dictyostelium_fasciculatum_328874203, 48 Dictyostelium_purpureum_330845458, 49 Dictyostelium_discoideum_66805693, 50 Polysphondylium_pallidum_281208603, 51 Arabidopsis_thaliana_42568561, 52 Glycine_max_571506330, 53 Vitis_vinifera_296089926, 54 Ricinus_communis_255563474, 55 Populus_trichocarpa_224123176, 56 Sorghum_bicolor_242066962, 57 Physcomitrella_patens_168067837, 58 Physcomitrella_patens_168052241, 59 Physcomitrella_patens_168052243, 60 Selaginella_moellendorffii_302756067, 61 Volvox_carteri_302828098, 62 Chlorella_variabilis_307104732, 63 Chlamydomonas_reinhardtii_159469087, 64 Coccomyxa_subellipsoidea_545358533, 65 Cyanidioschyzon_merolae_544210593, 66 Galdieria_sulphuraria_545709277, 67 Porphyridium_purpureum_contig_3419.3, 68 Ectocarpus_siliculosus_298705733, 69 Schizochytrium_aggregatum_Schag1_83217, 70 Aplanochytrium_kerguelense_Aplke1_105217, 71 Aurantiochytrium_limacinum_Aurli1_32548, 72 Saprolegnia_diclina_530740957, 73 Albugo_laibachii_325192212, 74 Phytophthora_infestans_301120488, 75 Phytophthora_ramorum_JGI_2507661889, 76 Phytophthora_sojae_348676426, 77 Perkinsus_marinus_294890669, 78 Plasmodium_berghei_68063625, 79 Plasmodium_knowlesi_193810136, 80 Plasmodium_falciparum_124513330, 81 Plasmodium_vivax_156099184, 82 Plasmodium_cynomolgi_457873656, 83 Plasmodium_yoelii_82752821, 84 Tetrahymena_thermophila_146165677, 85 Theileria_annulata_65303484, 86 Theileria_parva_71026135, 87 Babesia_bovis_156087951, 88 Giardia_lamblia_159108475, 89 Giardia_intestinalis_253742205, 90 Spironucleus_salmonicida_558601652, 91 Leishmania_infantum_146083652, 92 Leishmania_major_157867676, 93 Trypanosoma_cruzi_407838812, 94 Trypanosoma_congolense_342181069, 95 Trypanosoma_brucei_72389282, 96 Leishmania_braziliensis_154335346, 97 Trichomonas_vaginalis_154423037, 98 Buchnera_aphidicola_15617045, 99 Cand_Riesia_pediculicola_295698311, 100 Lamprocystis_purpurea_521993334, 101 Xanthomonas_oryzae_188577783, 102 Legionella_drancourtii_493928026, 103 Pseudoalteromonas_sp_494620031, 104 Bermanella_marisrubri_494076806, 105 Halomonas_elongata_307544784, 106 Oxalobacteraceae_bacterium_522193879, 107 Cycloclasticus_pugetii_519006632, 108 Cand_Vesicomyosocius_okutanii_148244464, 109 Hippea_alviniae_550921245, 110 Gayadomonas_joobiniege_516014004, 111 Veillonella_parvula_490831099, 112 Alteromonas_macleodii_407699945, 113 uncultured_bacterium_406979593, 114 Clostridium_tetani_28211675, 115 Desmospora_sp_497395288, 116 Aminicenantes_bacterium_551142562, 117 Psychromonas_ingrahamii_119944941, 118 Spiribacter_sp_554595317, 119 Methylotenera_mobilis_518740026, 120 Gilvimarinus_chinensis_519052214, 121 Psychromonas_sp_470478781, 122 Methylomicrobium_alcaliphilum_357405202, 123 Halomonas_lutea_517847798, 124 Marinobacterium_rhizophilum_522174335, 125 Methylotenera_sp_519028046, 126 Rhodanobacter_sp_495486361, 127 uncultured_bacterium_406999011, 128 Xenorhabdus_bovienii_290476194, 129 Halomonas_zhanjiangensis_517747105, 130 Escherichia_coli_487633144, 131 Hahella_ganghwensis_521078440, 132 Firmicutes_bacterium_547821648, 133 Cand_Kuenenia_stuttgartiensis_91202924, 134 Pedobacter_arcticus_515829424; TREE Tree1 = ((((((((((((((((((32:0.11497109,28:0.15888008)69:0.01662795,33:0.04809127)199:0.16202344,(27:0.2292557,30:0.18090402)109:0.04340894)194:0.18573879,31:0.30994427)143:0.12458606,(38:0.362998,(36:0.52190226,37:0.45255977)97:0.08704826)90:0.13753673)127:0.18066576,40:0.62410676)64:0.09094837,39:0.4566654)120:0.17029311,(41:0.4680809,(29:0.09431131,(23:0.14312679,(34:6.3E-7,((35:0.06754394,25:0.051642)155:0.02051447,(24:0.03974731,26:0.23414724)111:0.06510866)73:0.02862381)134:0.07514043)106:0.07687144)198:0.25969678)195:0.21039614)198:0.43983114,(42:0.63109684,43:0.66559964)200:0.69152796)42:0.04552047,((48:0.3015504,49:0.6287932)199:0.37349528,(47:0.42895657,50:0.6456543)149:0.13975371)199:0.55152863)50:0.23650306,((((14:0.05336501,18:0.05567698)200:0.47779512,15:0.19141793)199:0.6484865,(13:0.7266615,7:1.420467)79:0.28402013)82:0.35911772,((22:0.55728155,17:1.145262)27:0.15936261,(((1:0.14368752,2:0.09822747)200:0.39138946,3:0.50551426)156:0.16406679,(6:0.6508527,((4:0.55079436,12:0.46496987)118:0.21253747,(((19:0.42421943,16:0.43102548)87:0.08194467,8:0.47984046)108:0.10676801,(((9:0.18112606,11:0.23260851)200:0.5338328,21:0.594479)128:0.25866735,(10:0.61880857,(5:1.0509441,20:0.82623625)29:0.04342568)40:0.05045282)98:0.1582435)47:0.05003946)33:0.11323744)4:0.03705371)15:0.1398083)32:0.12987699)37:0.21385133)16:0.09299746,((((61:0.316368,63:0.5417106)200:0.6182926,62:0.7233649)165:0.22976995,64:0.6747494)131:0.17044784,(60:0.9878437,(((58:2.3E-7,59:0.01542782)198:0.1573718,57:0.23812348)200:0.3335313,((51:0.24813935,56:0.4632281)92:0.0404623,(53:0.263725,(52:0.21029799,(54:0.20497482,55:0.1994288)199:0.1413619)61:0.04948287)141:0.08858149)194:0.35430947)90:0.10909892)182:0.27709335)159:0.44448498)53:0.26364246,((((91:0.01952794,92:0.06084538)158:0.16143186,96:0.1362853)200:1.1173211,(93:0.5030941,(94:0.28501308,95:0.6657502)199:0.6983395)186:0.621176)200:1.2852126,(((75:0.08533159,76:0.2535665)199:1.1783838,68:1.2626398)200:2.0297825,(46:0.485602,(44:0.01132993,45:0.09512774)194:0.25184384)199:1.1264548)49:0.18622547)56:0.19867952)81:0.31422767,(66:1.1978948,(65:1.0003163,67:1.6065658)117:0.17722093)100:0.27205756)63:0.296647,(89:1.6640604,(90:1.9437945,88:1.3191088)107:0.54989135)136:0.69133943)105:0.2904435,97:2.2859323)184:0.8204733,((((((73:1.2738768,74:0.6567681)85:0.15086296,72:1.2783067)139:0.26269186,70:1.3606197)147:0.52808374,71:1.5262946)114:1.3664E-4,69:3.06733)183:1.2022848,(((((85:0.33016425,86:0.33785063)196:0.6461512,87:0.64896667)200:1.4697963,84:1.698736)80:0.32310644,77:1.7141217)126:0.72578907,(78:0.04783696,83:0.03992195,(80:0.5454642,(79:0.03727315,(81:0.03812546,82:0.06511042)184:0.09457324)74:0.2056594)97:0.25380933)200:1.412257)136:0.6182506)133:0.576634)144:0.2277413,(134:1.7838373,((111:0.9586262,115:1.5755064)145:0.3529384,((((116:1.2846062,109:1.4020293)152:0.3821986,133:0.9064144)86:0.14638022,114:1.3534058)62:0.28332958,(132:1.2111923,(((((117:0.50003713,121:0.38408786)193:0.49880585,(112:1.6620913,110:1.3967676)61:0.42623585)10:0.11146998,((98:1.5682062,99:1.1762868)173:0.5292541,(130:0.9350615,128:0.37545)102:0.12818402)177:0.60307896)17:0.20632209,(103:1.3952208,108:1.5169171)66:0.3154756)20:0.25461084,((119:0.80068374,125:0.794661)150:0.24107534,(113:1.6227546,(127:1.1284915,(((106:1.4418472,101:1.2816492)46:0.3647288,120:1.1291933)6:0.13637342,(((102:2.0387588,122:0.6435795)30:0.27065763,107:1.5031132)21:0.09749477,(((104:1.620357,131:0.7929857)85:0.42932025,124:1.1468558)37:0.17141218,(((105:0.5161074,123:0.4529182)148:0.33317205,129:0.46197394)197:1.0032884,(126:1.1609457,(118:1.4470025,100:1.0247763)38:0.22699353)7:0.05623098)4:0.1366513)3:0.15140699)3:0.16977328)3:0.15537798)9:0.1576401)4:0.12555385)16:0.21350072)144:0.4844192)53:0.2522418)43:0.16717973)107:0.46088147)144:0.2713414); END; BEGIN CODONS; CODESET * UNTITLED = universal: 1 - 322; END; BEGIN MESQUITECHARMODELS; ProbModelSet * UNTITLED = 'Mk1 (est.)': 1 - 322; END; Begin MESQUITE; MESQUITESCRIPTVERSION 2; TITLE AUTO; tell ProjectCoordinator; timeSaved 1397145958501; getEmployee #mesquite.minimal.ManageTaxa.ManageTaxa; tell It; setID 0 5600196625194729309; endTell; getEmployee #mesquite.charMatrices.ManageCharacters.ManageCharacters; tell It; setID 0 4802034670318845729; mqVersion 275; checksumv 0 3 2494958495 null getNumChars 322 numChars 322 getNumTaxa 134 numTaxa 134 short false bits 1048575 states 1048575 sumSquaresStatesOnly 3.46143849767883E14 sumSquares 3.46143849767883E14 longCompressibleToShort false usingShortMatrix false NumFiles 1 NumMatrices 1; mqVersion; endTell; getWindow; tell It; suppress; setResourcesState true false 100; setPopoutState 400; setExplanationSize 0; setAnnotationSize 0; setFontIncAnnot 0; setFontIncExp 0; setSize 754 666; setLocation 8 8; setFont SanSerif; setFontSize 10; getToolPalette; tell It; endTell; setActive; desuppress; endTell; getEmployee #mesquite.charMatrices.BasicDataWindowCoord.BasicDataWindowCoord; tell It; showDataWindow #4802034670318845729 #mesquite.charMatrices.BasicDataWindowMaker.BasicDataWindowMaker; tell It; getWindow; tell It; setExplanationSize 30; setAnnotationSize 20; setFontIncAnnot 0; setFontIncExp 0; setSize 0 -67; setLocation 8 8; setFont SanSerif; setFontSize 10; getToolPalette; tell It; endTell; setTool mesquite.charMatrices.BasicDataWindowMaker.BasicDataWindow.arrow; colorCells #mesquite.charMatrices.ColorByState.ColorByState; tell It; setStateLimit 9; toggleUniformMaximum on; endTell; colorRowNames #mesquite.charMatrices.TaxonGroupColor.TaxonGroupColor; colorColumnNames #mesquite.charMatrices.CharGroupColor.CharGroupColor; colorText #mesquite.charMatrices.NoColor.NoColor; setBackground White; toggleShowNames on; toggleShowTaxonNames on; toggleTight off; toggleThinRows off; toggleShowChanges off; toggleSeparateLines off; toggleShowStates on; toggleAutoWCharNames off; toggleAutoTaxonNames off; toggleShowDefaultCharNames off; toggleConstrainCW on; toggleBirdsEye off; toggleShowPaleGrid off; toggleShowPaleCellColors off; togglePaleInapplicable on; toggleShowBoldCellText off; toggleAllowAutosize off; toggleColorsPanel off; toggleLinkedScrolling on; toggleScrollLinkedTables off; endTell; getWindow; tell It; forceAutosize; endTell; hideWindow; getEmployee #mesquite.charMatrices.ColorCells.ColorCells; tell It; setColor Red; removeColor off; endTell; getEmployee #mesquite.categ.StateNamesStrip.StateNamesStrip; tell It; showStrip off; endTell; getEmployee #mesquite.charMatrices.AnnotPanel.AnnotPanel; tell It; togglePanel off; endTell; getEmployee #mesquite.charMatrices.CharReferenceStrip.CharReferenceStrip; tell It; showStrip off; endTell; getEmployee #mesquite.charMatrices.QuickKeySelector.QuickKeySelector; tell It; autotabOff; endTell; getEmployee #mesquite.charMatrices.SelSummaryStrip.SelSummaryStrip; tell It; showStrip off; endTell; getEmployee #mesquite.align.AlignToDropped.AlignToDropped; tell It; gapCosts 8 3 2 2; subCosts 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5; endTell; getEmployee #mesquite.molec.SequenceInfoEditor.SequenceInfoEditor; tell It; panelOpen false; endTell; endTell; endTell; endTell; end;