#NEXUS [written Fri Jun 06 02:16:17 EDT 2014 by Mesquite version 2.75 (build 564) at VampireS-PC/192.168.0.14] BEGIN TAXA; TITLE Taxa; DIMENSIONS NTAX=52; TAXLABELS Tetrahymena_thermophila Saccharomyces_cerevisiae Coccidioides_immitis Schizosaccharomyces_pombe Neurospora_crassa Tetrapisispora_phaffii Trichosporon_asahii Cryptococcus_gattii Tribolium_castaneum Megachile_rotundata Danaus_plexippus Apis_florea Bombus_terrestris Drosophila_melanogaster Drosophila_sechellia Drosophila_erecta Salmo_salar Danio_rerio Oreochromis_niloticus Takifugu_rubripes Xenopus_laevis Xenopus_tropicalis Homo_sapiens Caenorhabditis_elegans Caenorhabditis_remanei Caenorhabditis_brenneri Caenorhabditis_briggsae Ichthyophthirius_multifiliis Paramecium_tetraurelia Halocynthia_roretzi Ciona_intestinalis Mus_musculus Gallus_gallus Plasmodium_yoelii Neospora_caninum Toxoplasma_gondii Arabidopsis_thaliana Capsella_rubella Theobroma_cacao Cicer_arietinum Trypanosoma_cruzi Trypanosoma_brucei Bos_taurus Orcinus_orca Albugo_laibachii Thalassiosira_pseudonana Maylandia_zebra Taeniopygia_guttata Candida_albicans Schizosaccharomyces_japonicus choanoflagellida_Salpingoecidae Dictyostelium_fasciculatum ; END; BEGIN CHARACTERS; TITLE Character_Matrix; DIMENSIONS NCHAR=968; FORMAT DATATYPE = Protein GAP = - MISSING = ?; MATRIX Tetrahymena_thermophila -------------------------------------------------------MSSDNSEQEKQMQEEITKEQKILDKEENGDQNNLNDEGSRNQEEAEEITKILKESSSK---------VSEKYLESRLTE--AVECYKN-KNFDQAENIFSDLMIYAVKFY----------------KSETHVKMSKYFFFYGDMLL-SKLENNPDVF-GDKAQKKLDNQTTEEVEKN-PNQMASEEASEQKMVAQ-----------------------------------------------------------------------------------------------------------------------------------------KEQKEEDEEENEESQSQGEEEIVQLDTVIFKDENVEIRDET---------------------------------------NAPQNNEENQTEENNLPIGKVTMEKSDPIDDLQLAWENLELSRKIYNQELLQLQDSQDEDRKEK------------------------QIQVKKQIVEVTLRIADLEQWRDNFSDALKEYTMALQLSKEIE----DREYSRTLSSIFFQLGNAVLYENKEYC-----------------------------------EEEGLKNFIDSAQILEN-----CLSKKIAIPPQELPSFKILKKDDIKVDHL-------------KHSFLDDDES----------------KE-IK-DTLKVLYEKIEDTLIQRD----ERDKYKAYQ-----------ELMKKQSQNQNQFAQPSQN-----------------------------SVPIKNLGTFGSLKRKEPSSENSNSQNG---------------------SSTTMNIPPQESGNSQQSSNGSHISPDGNPDKMLKKD-------------------------------- Saccharomyces_cerevisiae ----------------------------------------------------------------------------------MKLRAEDVLANGTSRHKVQID------------------------MERQVQI--AKDLLAQ-KKFLEAAKRCQQTLDSLPK--------------------DGLLPDPELFTIFAQAVY-NMEVQNSGNLFGDALLAGDDGSGSESESEP-ESDVSNGEEGNENGQTE------------------------------------------------------------------------------------------------------------------------------IPNSRMFQFDQEEEDLTGDVDSGDSEDSGEGSEEEEENVEKEEERLALHELA---------------------------------------NFSPANEHDDEIEDVSQLRKSGFHIYFENDLYENALDLLAQALMLLGRP---------TADGQS-----------------------LTENSRLRIGDVYILMGDIEREAEMFSRAIHHYLKALGYYKTLK---PAEQVTEKVIQAEFLVCDALRWVDQVP------------------------------------AKDKLKRFKHAKALLEK-----HMTTRPKDSE---------------------------------------------------------LQQ----ARLAQIQDDIDEVQ--------ENQQH---------------GSKRPLSQPTTSIGFPALE--KPL-------------------------GDFND---LSQLVKKKPRRH------------------------------------------------------------------------------------------------- Coccidioides_immitis ---------------------------------------------------------------------------------------MPETLESSSQEDRLAE------------------------LKRLAS---AKEAI---KDYNSAADLYSRAVEIQAELN----------------G-EMAIDNADLLYSYGRCLY-HVAVSKSDVF-GSKAAI-QNVVESSKPRGK-ESSNQPQFFMPQSDKND-------------------------------------------------------------------------------------------------------------------------------------TSMEDKAAAERDAKKNSDTGTNKTYFQFNGDENFDDDDEDEEDAG---------------------------------------DTGREALVE-------------------DDDFENAFETLDMARVLLSRQLDSILLSFSGEKGVP--------------------ESTEIRRLKERLSDIYDLQAEISLEGERFSEAVSDLRAALKLKRELF----P-PGDSTVAECHYKLSLALEFSSVTQTSGEDSHLTSQVDLQM--------------------RAEAAKHMEAAIQCCKL-----RISSEEEKLAGMGSGN--------------------------IQELAKLSRN---------------IED-VK-EIVADMQQRLTDLLHPPNSI--TDSFQVPDR-----------VLENSILNQVQSPAGKVLL--------------------------EEAIKGAND---LNAFVRKRKRNPSTAETRE---------------------SLEEPAPYKEMKRPST----------------------------------------------------- Schizosaccharomyces_pombe ---------------------------------------------------------------------------MSSDTKTLENSKGNSATDADTKNPSSSDSRA---------------------IEQLVTQ--GNMAYAQ-KNYEEAVDKYGQALMQSESIH----------------G-SESLENRNVLWLYGKSLF-QIAIENSQVL-GNALGAKESVSQATESFEE-PEAIGSFTFSGQKIENK--------------------------------------------------------------------------------------------------------------------------------------------------------------YTVNEENSSIAHPEKESEEK---------------------------------------ETNEASPASEED----------------EDDFNVAWEVLDLTRVMQSKAVDAY-----PDSKDE----------------------------KIRLADIYDLLGELSLEIENFSQASQDLKTALEWKEKVY----NVSNNTLLSEAHYKLALALEFTNPEDPSN---------------------------------KSRACEHVEKAAEILKN-----VLNERENEVTDKKGKGKQ------------------------KAEESTLTSD---------------LEN-LR-EMLSELEQKTLDLKHGAP------------------------SLEEAVMSKMHESSLLSKD------------------SSSLAQAVAEAVKNAND---LGGLVKRKRTKQEVTSSSQK--------------------EGPKDKKKKD----------------------------------------------------------- Neurospora_crassa ----------------------------------------------------------------------------------MSTPTPAASGTATPIVELNAEEAALSLKVS---------------LADLSAH--AAAQYAQ-KNYDEAAELYAQAAEMQAEMN----------------G-EMNPDNAEILFLYGRALF-KVGQSKSDVLGGRAPEPKPEKKAAKSKKQK-KAATEEKEAGSSSLIKD-----------------------------------------------------------------------------------------------------------------------------AVEQATKGAQASIAEAAREVAHKDEPNPEKKPLFHFEGDENFDDSDKEEEDDD---------------------------------------EDAEEGEEEDED----------------DDDLAVAFQVLDLARVLFEKKLATLEAEQKTQEEGK------GKEKESDEAATTTEASPLIKHIKERLGDLHDLLAEISLENERYPAAITDSRASLKYKQQLY----T-QDSEIIAEAHFKLSLALEFASVTKSSDDDSAVPSEKASAGGAGVVDQAL-----------RDEAAAELEAAIASTKL-----KLQNKEVELASTHN----------------------------PEDNDATRRQ---------------IAD-VK-EVISDMEQRLVDLRK-------PPIDINEAL-----------GIAAPVSGTKGESSLKVAE---------------------------EVKEKAND---LTGLVKKKRKAESEAAPAE---------------------EGAP-----EAKKVKEE---------------------------------------------------- Tetrapisispora_phaffii ---------------------------------------------------------------------------------------------------MDKA------------------------IKTLVVE--GAKYTAN-SDLANASKCYAELLDLESKTA----------------GNAINPD---HVMLLASCLY-QLGVEKNDMF-GGGMDD-SEGEDDDGQNED-WVSDDGQDDEDADNKDT-----------------------------------------------------------------------------------------------------------------------EGKTDLNSTLYQFDQEEEDEDPTDGEDGDEQAA---------IDEEVYDGESELEQDNS---------------------------------------DNENHDPEDDIDEEGLISYVDYLE----GDHFQNTLELLQVARIIYMEN---------CDTGNV------------------------DSVTKLKLSAIYDLLGDVDQEVEDFATAVEDYKQAIDYIKETDEFENENERESKILTTSLKLIEALRWLTDYSAFT---------------------------------KDKHKEILNSTQILLKK-----RIDTGSSMDKEDD-----------------------------EQQLKQIEND---------------IED-LDDENAGSKKRKLEESIDTE-------------------------ALKKIILQKAMGFDFASSE---------------------------ESAKNVND---LSSMVFKKKKGKK------------------------------------------------------------------------------------------------ Trichosporon_asahii -----------------------------------------------------------MISCASARSFVNITFYLPPLVRIASIQKNTRSEKNSPAPEVKQDTKPEKPEEIQ---------AA---VAKLVSE--GKKAIAL-RQWEEGVGKYADALDLQRELV----------------G-DFDPTMAPLLLSYGKALY-ELALSQQGVM-GREEVA-KSTNPAAAEPSA-PAAKGNFVFEGDGD--------------------------------------------------------------------------------------------------------------------------------------------------------------------DGDEEEEGEGEEQEGEG---------------------------------------DGKGQQEEGEEEP---------------EDDFNAAWEVLDVARTIYTRE---------VEKLAK----------------------DEGKETKLLLSECYLALGDVSCETENFDQAVKDYEAAVKLKASLL----P-KSSRALASAEYQLGTALEFTPSG-------------------------------------RPAALVHVQAALDGFKA-----RLAELTSTSEPSPDVA--------------------------KLSEKERENE---------------RKD-VE-ALIGDLEVKIEELKA-------APEGGDIVS-----------ESISHLLGGQGGEVKADAG-------------------------------PVND---LTSMVKKKKKPAAAPAPTA---------------------EKRKAEEQPEGTPEKKAKN-------------------------------------------------- Cryptococcus_gattii --------------------------------------------------------------------------MSDPSSPKPADALAPSSSSSVDPQAIRSE------------------------VEKLVAE--GKKAIAL-HEWEQGVDRYATALDRMRLLV----------------G-DADPEMAPLLLAYGKALY-DLASSQASVM-GREEPVRQEDDVPAETNN--PNFVFSGDAPSDDEGEA-----------------------------------------------------------------------------------------------------------------------------------------------------------------DEPEPEVEPQASSSSAP---------------------------------------APAPDAAEGDEMEEL-------------EDDYNAAWEVLDVARTIYQKIVD-------GLKEGE------------------------GNKERMLLSDCYLALGNVSCETENFSQAVQDFTAAVDIQNTII----P-PSFRDLASAHYQLATALEFTPSPQS-----------------------------------RTSALTHVESALSSLVR-----RKEELLSSDESTWSEEIK------------------------KMTSKEKEAE---------------LKD-VE-ALMGDLQAKIEELKA-------APPAEDLIH-----------ESISHLMGQSGEASGSGSN--------------------------KVESGPVND---LTSMVKKKKPKATSAAPVPV--------------------VEKRAAEGGEEPAAKKAKNDEA----------------------------------------------- Tribolium_castaneum -------------------------------------------------------------------------------------------MADVALDPQNSN------------------------PKELFGQ--GVRAYVL-QDFDTAVKAFSKASELLAAEH----------------GSDVHDSLGDVYLYYGKSLL-ELSRKESGPL-GDGVLKNVEEESETEDVEE-NEAGEEESKPVNGETPK--------------------------------------------------------------------------------------------------------------------------------------------------TEEEDD---------KPPAEGETDQKVEESGS---------------------------------------SEEKKEGEETEDE---------------LTDLQVAWEVLELAKRIFTNR---------GTEGKK------------------------------NLAETLIVLGEISLESGNFTSAIEDMTQGLEIQKTLF----G-NDSRTIAETCYKLGGAYSTNGQ--------------------------------------IDEAIASFNSSYEYLQN-----KITSLK------------------------------------KDEKESNSEE---------------IEE-LN-GLIPEIQEKIADMKNLKT------------------------EIANKMTSSVEDETAPKTN----------------------GSAGASSSKQVND---ISHLVKRKRKEDEAKEEN----------------------PAKRPSP-------------------------------------------------------------- Megachile_rotundata -------------------------------------------------------------------------------------------MADVAENTAFTD------------------------PATAISH--GKRHLLV-RDYTMAVTALAQACQMLVEKH----------------G-DTADELGEPYLLYGRALL-GLAREEAGVL-GGGVPGNEDSVEDDEEDEE-EVEDEKLSNVDEKEEEN---------------------------------------------------------------------------EERASDNGASNDAKEVDGKVDESRSAEQPDKPETEKKGEKLEAGSEKKEEKKSDSNKTDDKKTLEQPTQKKSEEVKAGSSKDMNHTNGPSCSTTEQNGDAKEN---------------------------------------GDDGEDIGKEDEDDE-------------VNNLQVAWEVLELAKLVLLKR---------GQSGWK------------------------------LLADAYRLLGEVAMEGGNFQGALNDLHRCLELLQQIE----P-QEPRAIAEIHYQLALAHSLGNE--------------------------------------FDASIEEFNKATELLEA-----RIKELEEIKEPPKT----------------------------DDSFYTVEGE---------------IQE-LK-ELLPEIQEKISDMKDFK-----QEACKLVIE-----------GIKSKVAGGCSNGAGPSGS----------------------SDSTTKIQKPASD---ISHLVRKKRKADEPETEVAS--------------------PCKKPTPEKTV---------------------------------------------------------- Danaus_plexippus -------------------------------------------------------------------------------------------MAEVPEMSSST-------------------------PEELLAA--GRRHLAV-RDYTSAAETLATACELLAKTH----------------G-EFADECAEAYLWYGKSLL-GLSREENGYL-GDGVAGGNNEDGDNEEENG-EENAEAEQKNGEIATED-------------------------------------------------------------------------------------------------------------------------------------GDDEENKAEGTKENDKTEPESTTKDEEPGSSTENEEKPGTSNGDV---------------------------------------NDDSVVNLDNEDD---------------VDNLQLAWEMLDLSRNILQKR---------AENGKD---------------------------VRALLAEVHLALGEVALESETYDKAVADMISCLDIQKELY----K-SDDRHIAETHYQIGLANSLASN--------------------------------------FEDAITHFKNAANILET-----RIKTLENPKTVSECATVKKYAT--------------------TDPFYSVEGE---------------IKE-LK-ELLPEIQEKIQDMMDYK-----AETIK---------------RVRETLCPSNGESSNGAGS--------------------------SKTEQKASD---ISHLIKRKRKNSEEGGS-----------------------APKRVNT-------------------------------------------------------------- Apis_florea -------------------------------------------------------------------------------------------MADVAESAAFTD------------------------PATAISH--GKRHLLV-RDYTMAVTALAQACQLLAEKH----------------G-DTADELGEPYLLYGRALL-GLAREEAGVL-GGGVPGTEETEEDDEEDEE-EAEDEKLSNIDEKEDEE---------------------------------------------------------------------SEDHTDNGTVSDEKEKTAIEDKAEDSKTDQESKKPEAEKKEEKIESNNEKQEVEKSELDKTEDSKITKQAIEKPEKEDEKPAAGSSKDISHANGPSCSSDHNGDVKKNG---------------------------------------ENDGEDIGNEDEEDE-------------VNNLQVAWEVLELAKLVLLKR---------GQTGWK------------------------------LLADAYRLLGEVAMEGGNFQGALNDLHRCLDLLQQIE----P-REPRAIAEIHYQLALAHSLGNE--------------------------------------FDASIEEFNKATELLET-----RIKELEE?KEPPKT----------------------------DDSFYTVEGE---------------IQE-LK-ELLPEIQEKISDMKDFK-----QEACKLVIE-----------GIKSKVAGGCSNGAGPSGN----------------------NDSAPKIQKPASD---ISHLVRKKRKADEPETEVAS--------------------PCKKPTPEKAV---------------------------------------------------------- Bombus_terrestris -------------------------------------------------------------------------------------------MADVAENAAFTD------------------------AATAISH--GKRHLLV-RDYTMAVTALAQACQLLAEKH----------------G-DTADELGEPYLLYGRALL-GLAREEAGVL-GGGVPGTEETEEDDEEDEE-EAEDEKLSNVDEKEEEE---------------------------------------------------------------------TEEHTDNGAVNEAKEKTATENKTEESEAEQELKKPEVEKKEEKVETSSEKNETEKSDSDKTEDSKTTKETVEKPKEDEKPAADSSKDTSNA-NGPSCSTEQNGVVEENG---------------------------------------ENDGEDIEKEDEEDE-------------VNNLQVAWEVLELAKLVLLKR---------GESGWK------------------------------LLSDAYRLLGEVAMEGGNFQGALNDLHRCLELLQQIE----P-REPRAIAEIHYQLALAHSLGNE--------------------------------------FDASIEEFNKATELLDS-----RIKDLEQMKEPPKT----------------------------DDSFYTVEGE---------------IQE-LK-ELLPEIQEKISDMKDFK-----QEACKLVIE-----------GIKNKVAGGCSNGAGPSGS----------------------NDSAPKVQKPASD---ISHLVRKKRKAEESETEIIS--------------------SCKKPTPEKAV---------------------------------------------------------- Drosophila_melanogaster ------------------------------------------------------------MSAEAEAIVTTATADVSSPSKTVAVEPVAADTTPDNAPAVSTEGSGKAEQERA---------EKILKGKELFSQ--GSRNFLV-KSYDEAADELSQVCQLYEEVY----------------G-ELADELGQPLLLYAKALI-AMALDENKVI-DVPDEAADDDDEDVDDDEE-ESAEDGAAKKEEKKDTK---------------------------------------------------------------------------------------------------EAANGASSSNGKELDTIKEGSDEADSTGEAEQAQSDEKPSKKVPTGVDEVSSSNGGGGAAVNDDERPSTSNGEVTASCS---------------------------------------NGAAPAVEEEPEEEEGV-----------SGSLQLAWEILEAAAQIFSRQ---------GLSGLP------------------------------YLAEVQTELANIEFENGILEAAREDYEKALKIHGEL-----PTRNRRALAELHYKIGLTYLMQQL--------------------------------------NKEGATALRQSSVLIEE-----EIAEIKGKDEPSERDRNNMLDLEET-----------------KQEILAKIQE---------------IEE-MQAQTIAEVRAALDSYIKPMS----SGDAAAASS-----------SSSSSANGAASSSSSSSKG-----------------AAAASSSTISSSSAKPTD---ITHLIKRKKPEDPSSEAEALCS------------------PAKRAAV-------------------------------------------------------------- Drosophila_sechellia ------------------------------------------------------------MSAEAEAIVTTAAADVSSPSKTVAVEPAAADTTPDNAPAVSTEGSGKAEQERA---------EKILKGKELFSQ--GSRNFLV-KSYDEAADELSQVCQLYEEVY----------------G-ELADELGQPLLLYAKALI-AMALDENKVI-DVPDEAADDDDEDVDDDEE-ESVEDGAAKKEEKKDTK---------------------------------------------------------------------------------------------------EAENGASSSNGKELDTIKEGSDEADSTGEAEQAQSDEKPSKKVPTGVDEVSSSNGGGGAAVNDDERPSTSNGEVTASCS---------------------------------------NGAAAAGEEEPEEEEGV-----------SGSLQLAWEILEAAAQIFSRQ---------GLSGLP------------------------------YLAEVQTELANIEFENGILEAAREDYEKALKIHGEL-----PTRNRRALAELHYKIGLTYLMQQL--------------------------------------NKEGATALRQSSVLIEE-----EIAEIKGKDEPSERDRNNMLDLEET-----------------KQEILAKIQE---------------IEE-MQAQTIAEVRAALDSYIKPMS----SSDAAAASS-----------SSSSSANGAASSSSSSSKG-----------------AAAASSSTISSSSAKPTD---ITHLIKRKKPEDPSSEAEALCS------------------PAKRAAV-------------------------------------------------------------- Drosophila_erecta ------------------------------------------------------------MSAEAEAIVTTAAADASSPSKTVAVEPVAADTTPDNVPAVSTEGTGKAEQERA---------EKILKGKELFSQ--GSRNFLV-KSYDEAADELSQVCQLYEEVY----------------G-ELADELGQPLLLYAKALI-AMALDENKVI-DVPDEAADDDDEDVDDDEE-ESAEDGPAKKEEKKKDT--------------------------------------------------------------------------------------------------KEAANGASSSNGKELDPIKEGSDEADSTGEAEQAQSDEKPSKKVPTGVDEVSSSNGGGGGAINDDERPSTSNGEVTASCS---------------------------------------NGAAAAGEEEPEEEEGV-----------SGSLQLAWEILEAAAQIFSRQ---------GLSGLP------------------------------YLAEVQTELANIEFENGILEAAREDYEKALKIHGEL-----PTRNRRALAELHYKIGLTYLMQQL--------------------------------------NKEGATALRHSSVLIEE-----EIAEIKGKDEPSERDQNNMLDLEET-----------------KQEILAKIQE---------------IEE-MQAQTIAEVRAALDSYIKPMS----SGDAAAASS-----------SSSSSANGAASSSSSSSKS----------------AAAASSSSTISSSSAKPTD---ITHLIKRKKPEDPSSEAEALCS------------------PAKRAAV-------------------------------------------------------------- Salmo_salar --------------------------------------------------------------------------------------------------MVMEE------------------------ANKLIGT--GKRHLVM-GDVVSAVNYLQEACGMLAKRY----------------G-DTADECGEAFFLCGKALL-ELARMENGVL-GNALTGVPEEEEGEEEKPK-DSNIESTDNVDEKTRDE--------------------------------------------------------------------------------------------------------LRVQVYDAMAEEEKNGEKADSDKNTVEETGGGEEGQTVNGRVNGSDTTNGEEKVIGEKGDKAETKESSDNPEEE---------------------------------------DGDVEDGEEKEDIPEDSDDEE-------VGNLQLAWEMLEVAKVIYKRK---------EGKEDQ-----------------------------LLAAQAHLNLGEVAAESGNYSQAVDDFQQCLSLQLKHL----A-SDSRLLAETHYQLGLTLCSDCQ--------------------------------------YSQAIEHFNHSARVIKS-----RLAKLQEVLEKAEG----------------------------PEVAPEERKE---------------MEE-LK-ALLPEIQEKVEDATVGQK----ITAAVAAEA-----------VMQETLAGGSAFPTPSGSS--------QNEGASASVIQVRSTYGNAPSKSPASD---ISHLVRKKRKPGDSPVKEN---------------------DSKKVKQETQVNSNRDNGVKDKMEVERQ----------------------------------------- Danio_rerio ----------------------------------------------------------------------MPEETGATSTAERMEEKPCSSSTGDSSVDVAEE------------------------AKKLIGT--GSRHLVM-GDVVSAVSVFQEACAMLAEKY----------------G-DTADECGEVFFFCGKALL-ELARMENTVL-GNALEGVPEESSEEGEKQD-DSKIESADNLDEKTRDE---------LRAQVYDAMSEDNTRSEVEKEECGEGERN------------NKEEVEKQVKVDEAPKEADTASKTEKPTEDEAKPAENQEKMAVDEEKPAEKQEKIAVDEAKPAENEKLAKDEAKPEEKPAEEKTKQAEDEAKPAENEERPPEDKAKPASIEKCGNEDEKSKGEDEDASTNKDVTVSNGIAKKNKDESVEEKKGSEDTEEPMEEDGGDDDGDEDEDDDDDEDAEGDAKDKESEEDEVGNLRLAWEMLEVAKVIYKRK---------DDKEDQ-----------------------------LMAAQIHLKLAEVGVESGNYSQALEDSNECLTLQLKHL----P-SHSRLLTETHYQLGTTYSYTTQ--------------------------------------YNQAIEHFSNSIKVIES-----RLAMLQEVIDKAEG----------------------------EDAAKEEKGE---------------FEE-LK-QLLPEIKEKIEDAKES------QRTAAAASE-----------AIHQTLAGASTSSAFPTEN--------GGPSSSTASQIAVRPADGASSSKSASD---ISHLVRKKRKPDEESPKKDS--------------------DAKKTKQDTSVNGSDDSAHNGNGVQEKMEQEPANSSSVETSA--------------------------- Oreochromis_niloticus ----------------------------------------------------------------------------------------------------MEE------------------------ANKLIGT--GKKHLVM-GKVVEAVSTLQEACGMLAKKF----------------G-DTADECGEAFFWYGKALL-DLARMENSVL-GNALEGVPEEEEEEKPK---DSNVESTENVDEKTRDE----------------------------------LRVQ------------VYDAMAEKKTEDGEKVEGKQSEDPQEKTEGAEAGDEKEKTEKVEGEAEKDSKNDESKSESEDKKETSGEEVDAKDDSEPAAKQKEGDSADAKEEKEEDSTAEKDKTSAKEEEAAAEEEGDGEEDEEEG---------------------------------------GDDVEMEGDAEEQGEGDSTGEKDSDDEEVGHLQLAWEMLEVAKVIYKRK---------EAKEDQ-----------------------------LMAAQAHLKLGEVSAESGNYPQALEDFQECLKLQVKHL----D-SDSRLLAETHYQLGVTYSLNTQ--------------------------------------YSEAIESLKSSISIIKN-----RLDKLQEMLDKAEG----------------------------PEALPEERKE---------------LEE-LK-ALLPEIQEKVEDAT--ES----LKTASTASV-----------AVKDALDGGSTSSAFDGSTVQNSD------SSSTSEIKSTSTSNGNTSTAPVSD---ISHLVRKKRKPEESPVKE----------------------DVKKVKQDNSQLGETPLANGDAGGHANDMEVESK----------------------------------- Takifugu_rubripes ------------------------------------------------------------------MPEGTYTASSSGSAEEQPCSSSAAAAAEDSSVDVMEE------------------------AKKLVGA--GNKYLVL-GDVVSAVAVFQDACSMLAAKY----------------G-DTADECGEALFLCGKSLL-ELARMENSVL-GNALEGVPEESEGEEQPT--DSKIESADNLDEKTRDE-------------------------------------------------------------------------LRMQVYDAMAEKPKEVGQESVAGSVKTDEKRENSDAQSPIKSVNSANHGAKGNGVEKSPVPPVNDVINKPATNEEEPDKDVNSNAEAEEEDEGAEGNDDDSDEDD---------------------------------------EAGEGNGQAKEEE---------------VGNLQLAWEMLEVAKVIYKRK---------DDEDGQ-----------------------------LTAAQIYLKLGEVSAESGNYPQALEDFQECLCLQLKHL----P-PHSRLLAETHYHVATTLCYMDK--------------------------------------YSQAIQHYNSSIEVIEK-----RLGMLQEAIAKAEG----------------------------EDGTAEEERE---------------LEE-LK-QLLPEIREKVEDAAES------QRTASAASQ-----------AIQQALGGASTSSAFRCEN------GGPSSSSLEPASQVPVTSSDSPPSKMASD---ISHLVRKKRKPEEGRVKDT---------------------DAKQAKQETTVNGSSDSTASNSNAVQGKSQEASDGLVL------------------------------- Xenopus_laevis --------------------------------------------------------------------MAEETAALSTEKTEDTSTAPSTSAEKADGIDIDTE------------------------AKRLMGA--GQKHLVM-KDVRSAVNLFQEASSLLAKQY----------------G-ETADECAEAFYSYGMSLL-ELARLENGVL-GNALEGMPEDDEEEAEKEE-DPNIPSADNLDEKEREQLREQVYDAMAEDQRAPDDTSESEAKGKPEGDSKDKEAD------------EKMKNGQKETEKVTDDLKIDSASRDVPMDKSGKGEPPESKDAETLVEQKESKPETLKEKSIETKEKDLSKEKTDAKETANQSPDSTEVAEEKMDSEASESKESTSIPPTENEANKPDDPEKMEEEEEG---------------------------------------EDSEENEDENEGTEEKETEEED------VGNLQLAWEMLDLCKIIFKRQ---------QSKEAQ-----------------------------LKAAQAHQKLGEVCIESENYSQAVEDFLACLNIQKEHL----E-EHDRLLAETHYHLGLAYQYSSK--------------------------------------HEEAISHFTQSIGVIEK-----RMDVLTKQLEASV-----------------------------GELVDEVKKE---------------MDE-LK-DLLPDIKEKIEDSKEA------QKNATVTEK-----------ALKETLVGGSSGFSKENGS------------TSSSSAVEKSGDSTVPVTNCVSD---ISHLVRKKRKTEEESPLKDK--------------------DAKKSKQEPVANGAGNGDAVVPTNEEAEKAEEASMETATVESTA------------------------- Xenopus_tropicalis ------------------------------------------------------------------MAEETAALSTGTEKTEDTSTAPSTSAEKADGMDIETE------------------------AKKLMAT--GQKHLVM-KDVRSAVTSFQEASSLLAKKY----------------G-ETADECADAFYSYGMSLL-ELARMENGVL-GNALEGMPEDEEDGEKE---DPNIPSADNLDEKERDQLREQVYNAMAEDERASKSTSESEGKGKPEDESNRETDEKNKPVEKMNGDMETEDVTDGLKADSATQDVTMDESGKAEAAKGAETPGEHTEKENSEAETQKEKISESKENESKDQEKTDAKEIANQSPDSTEVTEERTHTDTSEKMDSEVSAETEEPKSIPTENEASKPDDKEKMEGEE---------------------------------------EEGEDSEENDEGTEENEGTEEKETEEEDVGNLQLAWEMLDLCKLIFKRQ---------QSKEAQ-----------------------------LKAAQAHLKLGEVSVESENYSQAVEDFLACLNIQKEHL----E-EHDRLLAETNYHLGLAYQYSSK--------------------------------------HEDAISHFTQSVGVIEK-----RMGVLTKQLETS------------------------------VGEPDEVKKE---------------MDE-LK-DLLPDIKEKIEDSKEA------QKNATATEI-----------ALKETLVGGSSGFSQENGS-----------TSASSTTVEKSGDSTVPVTNCVSD---ISHLVRKKRKPEEESPLKDK--------------------DAKKSKQEPVANGAGNGDAVVPTNEEAEKAEEASMETAAVETTA------------------------- Homo_sapiens -------------------------------------------------------------MAMESTATAAVAAELVSADKIEDVPAPSTSADKVESLDVDSE------------------------AKKLLGL--GQKHLVM-GDIPAAVNAFQEAASLLGKKY----------------G-ETANECGEAFFFYGKSLL-ELARMENGVL-GNALEGVHVEEEEGEKTED-ESLVENNDNIDETEGSE-----------------------------------------------------------------------------------------------------------------------------------------------------------------EDDKENDKTEEMPNDSV---------------------------------------LENKSLQENEEEE---------------IGNLELAWDMLDLAKIIFKRQ---------ETKEAQ-----------------------------LYAAQAHLKLGEVSVESENYVQAVEEFQSCLNLQEQYL----E-AHDRLLAETHYQLGLAYGYNSQ--------------------------------------YDEAVAQFSKSIEVIEN-----RMAVLNEQVKEA------------------------------EGSSAEYKKE---------------IEE-LK-ELLPEIREKIEDAKES------QRSGNVAEL-----------ALKATLVESSTSGFTPGGG-----------GSSVSMIASRKPTDGASSSNCVTD---ISHLVRKKRKPEEESPRKD---------------------DAKKAKQEPEVNGGSGDAVPSGNEVSENMEEEAENQAESRAAVEGTVEAGATVESTAC----------- Caenorhabditis_elegans ----------------------------------------------------------------------MDTENIADASDIRVKDASGDSDEKGNGTTTEEETVEQKEKR----------------LAELLAA--GRRALKV-NDIDKASDSLSEATELSSEIY----------------G-ENHENTFDSLYYYGMATL-ELAKEESQLLKGPG----EKESGDEEQAGN-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SDDKTDEENGETEKEDG---------------------------------------EESGEEEDDD------------------DDTMKLSWEILETARCIAAAKIEALEAEQSGISAIE--------------------------EWNLKLADVLVLLGEHGISDGKYTQAFEDLDRALNIQRNVL----P-PSSRKIAQTYILIGNACASDAN--------------------------------------YDETVQYFGKTKDVLIA-----RQTELKHELERGVDD---------------------------KEKKSEFENE---------------LKE-LE-EMMPGVEEMIADAVHS------AAQVEETKK-----------AIKAQFEGFTQVLAKLPQE--------------------------AGDQKEAND---ISSLVRRPAKRAVDAPTDNQ--------------------AVKKEKEEEGTTSI------------------------------------------------------- Caenorhabditis_remanei -------------------------------------------------------------------------MSTEDIIDQTKVSAGGDEPEKENSEPTQEEKEKR--------------------LAELLAN--GRRELRV-NNNAEASEILSEAAELSVEIY----------------G-EGHENTFDACYYYGMASL-EVAKLESALL---------------------KNPDEKQRNGVSGDEEA-----------------------------------------------------------------------------------------------------------------------------------------------------------------ASGDEEEKTAEDENDDG---------------------------------------SEKEDGEESEDDD---------------EDSMKLAWELLETARCTAAAKIEALEAERSGVQAIE--------------------------QWNLKLADVLILLGDHGIADENYEQAREDLGRALGIQQNIL----P-PSSRIIAQTYILMASACSSSMN--------------------------------------FTDAVTFYKRTKDTLVA-----REEELKKQLPEIED----------------------------KEKKSEIEDE---------------LKE-LE-EMIPGIDEMINDANAS------AEQVEQTTK-----------EIKAQFAGFTTILSKLPQE---------------------------TEEKEVND---ISNLVRRPAKRQTEITDINA--------------------DTTKKTKSAEKEEENSQI--------------------------------------------------- Caenorhabditis_brenneri --------------------------------------------------------------------------MNTENIIDAVGDSPENSVVNKEQKDVVSQSSEEEKKER---------------LSELLTA--GRRAIRV-NNIEEASEILSQATELSTEIY----------------G-ESHENTFDAYYFYGMATL-ELAKVETQLL--------KNDKDKELDREE-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------EEDTCADEKATESKENG---------------------------------------DESDEEEGEESSEED-------------DDNMRLAWELLETCRCIAIVKIEQLQAERNGVKLIE--------------------------EWNLKLADVLVLLGEHGVSDGKYDQAKEDLEKALEIQKNVL----P-EGSRQISQTYILMANACSNAMN--------------------------------------FEEAVALYQKTKESLLH-----RQRDLKQQLEIVDD----------------------------KEKKAEIEND---------------LKD-LE-EMIPSVDNMIADSTSS------AEQVDETRK-----------AIKAQFAGFTSILSQLPQE-------------------------SSSNNEEAND---ISNMVL------------------------------------------------------------------------------------------------------- Caenorhabditis_briggsae -----------------------------------------------------------------------------MSVEDSAEVVVQVMEAEKANDELTREQKEKR-------------------AAELLAA--GRRALKV-SDYETATEALSEASEMIVELY----------------G-SDHENTYEYYYYYGMATL-ELGKIQGQVF-NA-----PNEKEDNGEAQN-S---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAGTITNEKGEGDGENS---------------------------------------EKEDGEESGDEED---------------DDTMKLAWEVLENARCIAMAKIE-------ALKAER-------------------SGVSVIEEWQLKLADVLVVLGDHSVSDGKYDQALEDLEQALEIQKNVL----P-SNSRKIAQTYILMADACTSGMN--------------------------------------YDEAINYFEKTKETLKS-----RSEHLENKLKEVGD----------------------------QEQKLDMQDE---------------LKD-LE-EMVPLIDDKIADSKSS------AEQMEKTKE-----------AIKAQFDGFAALMSQLPQS---------------------------SEQKEAND---ISNLVRRPAKRPVEETETT---------------------AEEKKKTKAEEEEGTSEL--------------------------------------------------- Ichthyophthirius_multifiliis ----------------------------------------------------------MEKTEKSKSQTVDEHDNQSPKNINVQNSTNNDCIQTDSQKNENKENKPEITEEY---------------LEQQIEK--VKEHIRK-NEFESAEEIFSDLMIDAVKYY----------------KNEQHYKMSKYYYYYGDMLL-TKQDQEED----------ENQNENKNENEN-QNENENQINQDEKIIQI------------------------------------------------------------------------------------------------------------------------------------------------------------------DTILYKDNGVQIQEEK---------------------------------------INGNQEEQKEQNLVQQK-----------IDDLQLAWENLELCKKIIYKNLEEVKQSSNLDKKEK------------------------QKELLRQIVQVTLRLGDLEAWRDSLKDSVEQYTEALNIAFQIE----DKEYSRYLSSIYFQLGNSLLYENKEFC-----------------------------------EENSLKNFIQSAQILEN-----ILSSKIGIPRVQ-----IKCYKEIKNEDIKID----------HLKVSFLDDE---------------ISKDLK-ESLKNLYEKIQDTINQKED---RVKFQKAQE-----------EMKAQSLNQNQFKTTIDPQ--NVQ--------------IKKLGTFGNVKKNNDDYNQIQQQLDKNQQQLNIKQQQLN--------------------ETQQQLNDNQEYLNNNQIQGYKQNIEDLDNVVKKIKND------------------------------- Paramecium_tetraurelia -------------------------------------------------------------------------------------------MDQVDIETINQQ------------------------ARK------AKELFNE-GKHNEAEVMMQGVMQQALAYY----------------KDELAVEMAEYYYMYGTIIV-LKLSEQQDVF-------------GQRTREA-ENNALGVQDPEDTQSEN-----------------------------------------------------------------------------------------------------------------------------------------------------------------EGEQIEDGDIEEEHKVQ---------------------------------------ENKPHENIED------------------LDDFHIAWENLEVARVILEKEVQSQ-----KDKGVQ------------------------EFKYMRNLAKVYIKLAELDQWRDKFDDAQENLQKSLQLRLQCE----NQEISRDIAETYFFLGNVTLYNYKEGK-----------------------------------EEEALGFYLKALQILEN-----HLCKLQNKEQKQITLQDAYEREHL------------------KISFLDNEDT----------------KE-LK-QVLSMLYDKVEDTNIAWKEIQTEEWKRAREEM----------LNKAQLIEQQQVQQQQFTQQPIQEERQIIQLGNFGNARRRVEVIEQQQQNPVVQQNNQENVQEKQKEEEEEEPKED---------------------ASKKVKID------------------------------------------------------------- Halocynthia_roretzi ------------------------------------------------------------------------------MVQDTEVVEAGTSKETETTVDVEKE------------------------IQECMGA--GKKDLLC-NDYSEAVNCFQEACTLLSGKH----------------G-QMAEECCEAYYYYGVSLL-ELARLENGVL-GNALKGVPEEDADGDSDQEQEQFEKPDLPETEREKLR---------------------------------------------------------------------------------------------EEVEAAMATEDEDTQEERGCPRRVEKKKEDDKPKESEKSAEKSDEKEKEEKQAKVESSTVKDVKDEKSSDKPVESSNTEEPGTSG---------------------------------------TSASSSKENESEEDPDD-----------ISNMQLAWEMLELAKVLYKKH---------DKSKTN----------------------------KQMVAQCHLKLGELGLEVENHPQAIGDFLECLVIQKDLL----P-ETDRKLAETYYNLGLAYSFEKR--------------------------------------YDNALEHYQSALDVLEA-----RVDMLNELIESNEGNKEK------------------------EKEIISECKE---------------VGE-LK-ELIPDINSKIEDVILAK-----KQMQKLDGS-----------PFRQASEGESSSGLGASTS--------DDKPCSTIPIRKVAPTSVPVAKDSPSD---ITHLVRRKRPSPDEDNQPA---------------------ESKENESKKAKQEETEEATNGHSAVKKDTDVTDKNGTNGHSKTPKKDAAKRR----------------- Ciona_intestinalis -----------------------------------------------------------------------------MVVDASKVTEKEATQTETSEQDLENE------------------------YAINLAN--GKKNLLC-GDFPEAVACFQATSALQSERF----------------G-ETSHECAESFYFYGKALL-ELARVENGVL-GNALKGVPQVEEASSESEGEGNQFEKTKNLPVEKRKE-------------------------------------------------------LREEVVAAMATENEDEDTQDESEKDDKDEKKEKDENQEKKDENKEKKDENKEKKDENKEKKHENQEKKDENEKEEMECSEDKPTTEVPDAKQKESKDDSTKKSEDTKKEEKPADTSDVPMEAD---------------------------------------EPSTSGGVKDEDVKDEDTEDPDD-----VPNMQLAWEMLELAKVLYQKK---------PKSEDN----------------------------SLLVAQCHSKLGELGLEVENYSQSIGDFLESLVIHKELL----A-KHDRRLAETHYNLGLAYTFDKR--------------------------------------YDNALEHYTASLNVLDA-----RMEYLNERIDENDRKKEN------------------------QSETLAECAE---------------IGE-IK-DLLPDINSKIEDV-----------------------------IIMKRQEGRLDGSPFRTPS-------SAG----------------------------AGGIGSKRYCC-------------------------------------------------------------------------------------------------- Mus_musculus -------------------------------------------------------------MATESTAAAAIAAELVSADKIEDAPAPSTSADKMESLDVDSE------------------------AKKLLGL--GQKHLVM-GDIPAAVNAFQEAASLLGKKY----------------G-ETANECGEAFFFYGKSLL-ELARMENGVL-GNALEGVHVEEEEGEKTED-ESLVENNDNVDETEGSE-----------------------------------------------------------------------------------------------------------------------------------------------------------------EEDRENDKAEETPNESV---------------------------------------LEKKSLQENEEEE---------------IGNLELAWDMLDLAKIIFKRQ---------ETKEAQ-----------------------------LYAAQAHLKLGEVSVESENYIQAVEEFQACLSLQEQYL----E-AHDRLLAETHYQLGLAYGYNSQ--------------------------------------YDEAVAQFGKSIDVIEK-----RMAVLHEQMKEA------------------------------EGSFTEYEKE---------------IEE-LK-ELLPEIREKIEDAKES------QRSGNVAEL-----------ALKATLVESSTSGFTPSGA-----------GASVSMIASRKPTDGASSSNCVTD---ISHLVRKKRKPEEESPRKD---------------------DAKKAKQEPEVNGGSGDAVSSGKEVSENMEAEAENQAESQTAEGTVESAATIKSTAC------------ Gallus_gallus --------------------------------------------------------------------------------MEEDLAAPSTSADRTDSMDVDAE------------------------SKKLLGL--GQKHLVM-GNIPAAVNAFQEAASLLGKKY----------------G-ETADECAEAFFYYGKSLL-ELARMENGVL-GNALEGVQVEEEGEKAEDD-----SALPAVDETEE-------------------------------------------------------------------------------------------------------------------------------------------------------------------SEEEDKENDKAEDDKEN---------------------------------------ELAVEDKESEEEE---------------IGNLELPWDMLELAKVIYKRQ---------ETKEAQ-----------------------------LHAAQAHLKLGEVSIESENYVQAIEEFQACLALQQKYL----E-AHDRLLAESHYQLALAYHYNSQ--------------------------------------FDEAVLQFGKSVEVIDK-----RLAMLTERIKKA------------------------------ESGSPEDEKE---------------IEE-LK-GLLPEIKEKIEDSKES------QKSARVAEL-----------ALKATLVGTTSGFAQSEGS--------------GSVSTIPVRKAADGASQCVQTSLTWSGKRGNQRRRPTRETMKLRNLNQNRLSMVVVVMLPPVEMRLQKKWKRRWAVESGLCAYIIFFSFPLCSGMVLCMVSCVADNTGFIACWSSQASHKMGNIPKLTGCMLY Plasmodium_yoelii ----------------------------------------------------------------------------MTEEEIIAETGSNTESEFDEQAELLEKKT----------------------AQELFDM--GNLEFKESKNYDVAAERFSMAVEKKVKEL--------------NVEDSLHPDLREYYLCFADALL-TKEEEKNDLF-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------EFLKKKKSVEVTEDEDG---------------------------------------SNKEE-----------------------VTDEQLAFEMFEFSRKCYEML---------LEQKKE-----------------------LSQKDLLNYSYVFIRLGDISLLNHFFEEALKEYEKCVNLREEHK------LGDENLIAPLISLSQSYMFCGK--------------------------------------RKEAVEYFEKVKKILLD------VRQKTTPLPK-------------------------------NTNEKIIRDT---------------YED-VQ-IQINDLKRQIEEEGE-------EGKEKGSQT-----------IAKELVITTKSEFDKAVLN------------------------------KDVNE---VKKITISNIEADEHANKKRRI-------------------NLSNYKN-------------------------------------------------------------- Neospora_caninum --------------------------------------MPKMPATPPQPSAAEQQ-----VKQTGDAAGGVDQEAAPAPAESTESNSSPPATEKDEENEVEEEESEEADDEKE---------FAEKQAETLLDE--GKALFRS-RNWAKAAEYFSRAVERKVTEL---------------GGADFHPELSTYYLWFGDALL-TKEEQNAELF-Q------FDKTKQEAAESG-APSSGAESSASSSSASG-----------------------------------------------------------------------------------------------------------------------------------------------------------------SSSSTEKGAHSEEEVPG---------------------------------------GNAAGK----------------------VSDEELAFEMLEMAKRCLLKK---------LEKSPPPASSASSSSVQAEDEKGQASKESVVHSDVIDLSFAYVRLADMQLMNERYDEAAQDYREAVSLRERYT------LPEQTLMAPLLSLAQATFFSGK--------------------------------------KKAALDVFKRTLSIGKQ-----IKEGELGMPDGMTAEAL-------------------------ADTIEDLQLQ---------------VTD-VERQIAEDAAAGITSD---------EAATKGSQC-----------AAREYIATTTSTFDAPQLD---------------PSSTKVVRVSIRPSSAPVSV---VGGVPKTERHDDEEESFRHS--------------------PKKRRIDLRQLQNLAEQKTAKDEVQPKVEEETAKAEEAKPEADKVKIKDE------------------- Toxoplasma_gondii ------------------------------------------MPKMTATAPQPSAAEDQAKTAADETVGAGHVAAPAPAEGADSNSTPPATEKDGENEVEEESEEAEEDDEQE---------FAEKPADTLLGE--GKTVFRS-RNWAKAAEYFSRAVERKVAEL---------------GGADFHPELSTFYLWFGDALL-TKEEQNAELF--------QFDKAKQDAESG-AAAASSAAPASSSSATS-----------------------------------------------------------------------------------------------------------------------------------------------------------------SSSSTDKGTERHEEEVP---------------------------------------GGNAAGK---------------------VSDEELAFEMLEMAKQCLLKKLEKSPPPATSSDLAE--------------GEKNQSNKDTVHSDVIDLSFAFVRLADMQLMNERYDEAAQDYGEAVSLRERYR------LPEQTLMAPLLSLAQATFFSGK--------------------------------------KKAALDVFKRTLAIGKK-----IKDGFLGMPDGMTADAL-------------------------ADTIEDLQLQ---------------ITD-VEKQIAEDAAAGITNE---------DTATKGSQC-----------AARECIATTTSTFDAPQLD---------------PSSAKVVRVSIRPASAAVSV---IGGVSTKTERHDDEEEAFRHS-------------------PKKRRIDLRQLQGVAPEPKTVKGEAELQAPAEIPKVEEAKPEAEEVKTKEE------------------ Arabidopsis_thaliana ---------------------------------------MVEESASASEASVIQTLTEPATEIAQTLEPNLASIEATVESVVQGGTESTCNNDANNNNAADSAATEVCDEERE---------KTLEFAEELTEK--GSVFLKE-NDFAEAVDCFSRALEIRVAHY----------------G-ELDAECINAYYRYGLALL-AKAQAEADPL-GNMPKKEGEVQQESSNGESLAPSVVSGDPERQGSSSG-----------------------------------------------------------------------------------------------------------------------------------------------------------------QEGSGGKDQGEDGEDCQ---------------------------------------DDDLSDADGDADED--------------ESDLDMAWKMLDIARVITDKQ---------STETME-------------------------------KVDILCSLAEVSLEREDIESSLSDYKNALSILERLV----E-PDSRRTAELNFRICICLETGCQ--------------------------------------PKEAIPYCQKALLICKA-----RMERLSNEIKGASGSATSSTVSEIDEGIQQSSNVPYI-----DKSASDKEVE---------------IGD-LA-GLAEDLEKKLEDLKQQAE----NPKQVLAELMGMVSAKP---NASDKVVPAAAEMSSSRMG--TVNTNFGKDLESPTVSTAHTGAAGGGAASGVTH---LGVVGRGVKRVLMNTTSIESS-------------------ASKKPALEFSDKADGNSS--------------------------------------------------- Capsella_rubella -VSIFSLKSAKKRREGFATNCSQQICHFLFFLISNSPTNHAMVEEAASASEASVTEAVPTLTEPVIQTLEPNQASIEATVESAVQGGTESTCNNNNNNAADSAATDVCDVERE---------KTIEFADELTEK--GSVFLKE-QDFGEAVDCFSRALEIRVEHY----------------G-ELDAECVNAYYRYGSALL-EKAQAEADPL-GN-----VPKKEGEVQQES-SSKDDSVKNTVNGESLA-------------------------------------------------------------------------------------------------------------------------------------ASVVSSNPERQGSSSG------------QEGAGGIEQGEDGENCH---------------------------------------DDDLSDADGDED----------------DSDLDMAWKMLDIARAITDKQ---------SADTMV-------------------------------KVDILCALAEISLEREDIESSLSDYKKALSILERLV----E-PDSRHTAELNFRICICLETGCQ--------------------------------------PKEAMPYCQKAMLICKA-----RMERLSNEIKGASGSATSSTVSEIDEGIQQSSNVPYI-----DKSTSDKEAE---------------IEV-MA-GLAEDLEKKLEDLKQQAE----NPKQVLAELMGMVSAKASEKASEEAVPAAAEMSSSRMGT--ANTNFGKDLESPTVSTAHTGAAAGGGASSGVTH---LGVVGRGVKRVLMNATSIESS-------------------ASKKPATGPSDKADGNSS--------------------------------------------------- Theobroma_cacao ---------------------------------------------------MAEEEVTAPAASEASVTMTEQTPDLKVGETLGTQGSIEGTIESAVQGGTESTCNNNDNAESLGLASDVDREKTLEFADELAEK--GSKAFKE-NDFAEAADCFSRALEIRVAHH----------------G-ELAIECLKAYYLYGRALL-YKAQEETDPL-VSVPKKEGETQQGSNKEESVKSAVNGESSVASVSSDA---------------------------------------------------------------------------------------------------------------------------------------------------------KQDESSTQHEGATKDGGRDEEEEDE---------------------------------------DSDTDDVAEADED---------------DSDLDLAWKMLDVARAIADKQ-------QLGDTMEK--------------------------------VDILSALAEVALEREDIESSLSDYQKALSILQQLV----E-PDHRQIAELNFRICMCLEIGSK--------------------------------------PQEAIPYCQKAISVCRS-----RLERLTNEVKSSAGSALSSAASELDDGVQQSSDGSQT-----VKSITDKEAE---------------ITT-LA-GLAEDLEKKLEDLQQLAS----NPKSIIAEL-----------LGMVSARGRDGEKSAAPTA--VSSSRIATANSNGNFDSPTVSTAHSNGTAGVTH---LGVIGRGVKRVLMSTGSVESS-------------------SAKKPAIEPSSDNGDGSSAS------------------------------------------------- Cicer_arietinum -------------------------------------------------------------MVEEAHAASETSVTMPPPTETVTVVDGTLNRDEHDKNGLTTESAMVSDAENSGLASGGDDRKALDLADELMDK--ENKAMKD-NDYGEAADNYSRALEIRVGHY----------------G-ELAPECVHTYYKYGCALL-YKAQEEADPL-GVVPKKQDVPQHGSEKDGSVKSAMNAESSTASFPNNA----------------------------------------------------------------------------------------------------------------------------------------------EQDVTSNNRE---------SEVVNATSGKNDQEDGG---------------------------------------DSDAEDLAEGDED---------------ESDLDLAWKMLDIARAIVEKQ---------SVNTME-------------------------------QVDILSTLGDVALEREDFETSLSDYQKALSILEQLV----E-PDDRKIADLNFRICLCLEVGSR--------------------------------------PEEAVAYCEKATSVCKA-----RLHRLTNEVKSFSDLTSSASEIKRDEQTYPGSES--------NNSIVDKQAE---------------IET-LT-GLSSELEKKLDDLQQLIS----NPKSILAEIL----------GIAAAKAGNGKESSGGRVS----STQLATANSSGGFDSPTISTAHTNGSAAVTH---LGVVGRGIKRASNASVEEAS--------------------IAKKPALETTEGKGDGGNA-------------------------------------------------- Trypanosoma_cruzi -----------------MESSGQTDRSSRERREDEATPSASDVRAGREADFLLQRQQQQQQEEEEKPRDRHETDAPGSDEEGEESSSCEDECKEDNDDASVVDGEDEEEEETT---------PFATDEEANEARAVGIAHYNN-HRYEDALDIQYRVVRHFEKKY----------------G-ATAPICGVYFLDYGLSQL-RVLQSKSTV----------------------EAALQPLD--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------QDALEACFINLDVARVCFQKQ---------EQERGE-----------------------EDIEVQLHLAEVHNSIAQLQVEREDFDSALKEYESELMTYRFIQEEAPQMLPYRRLAAVLYGIADCYMKEGD--------------------------------------FEGAEERFQAALDELASFPADAIPAELVKELEELREDA--------------------------REMKGGKYKE---------------LQECIQAQFAVKEAEELPTVQEFYGEDAGNEEGGRKTH-----------PYVSRLPGEPEYSALSMPQ--SLTNPVQWNEHSNSMSLSLFPPQVNGRGSETSNSQPVHHVVARRKPKQPMSQQQQQ--------------------PGERGGASSIGEPEAKRARTESCS--------------------------------------------- Trypanosoma_brucei ----------------------------------------------------------MSDPQQQQRVAEAAVRNDQGEQQLTGVKPGEKQAEGTEASSSESNCSSESSEEII---------PFNSEEEAVAMRAVGLELFNK-HNYEEALDVQYRIVRYFENKY----------------G-ATYPECGIYFLDYGLSQL-RMIQSASSM----------------------EAALDPLD--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------HDALEACFTNLDVARVCFQKQ---------ERSRGE-----------------------NDVEVQLRLAEVHNAIAQVQVEREAYEEALKEYESELFIYRYLEQEIPASLPYGRLAAVLYEIADCYMKEGD--------------------------------------FEGAEERFIKAIEEIEKFPEGKVDPKLVEQMRELLEDA--------------------------REMKDGRFKE---------------IQEFIQEQFAVNETERLPTAQEF------YGDVDEQQH-----------PFVSRLPNDGECSALSMPQ--SNTNPVQWSEHSNSMSLSLFPSQVNGRSSEASNSQPVQHVVARRKPKPLQKQKAL---------------------EVESSGNVSTGSDMKRFRAES------------------------------------------------ Bos_taurus ------------------------------------------------------------MAAESTATAAITAELVSADKIEEDAPAPSTSADKVESLDVDSE------------------------AKKLLGL--GQKHLVM-GDIPAAVNAFQEAASLLGKKY----------------G-ETANECGEAFFFYGKSLL-ELARMENGVL-GNALEGVHVEEEEGEKTEE-ESLVENNDNIDETEGSE-----------------------------------------------------------------------------------------------------------------------------------------------------------------EEDKENDKAEETLNDSA---------------------------------------LENKSLQENEEEE---------------IGNLELAWDMLDLAKIIFKRQ---------DTKEAQ-----------------------------LYAAQAHLKLGEVSVESENYLQAVEEFQACLNLQEQYL----E-AHDRLLAETHYQLGLAYGYNSQ--------------------------------------YDEAVAQFSKSIEVIEK-----RMAVLNEQMKEA------------------------------EGSPTEYEKE---------------IEE-LK-ELLPEIREKIEDAKES------QRSGNVAEL-----------ALKATLVESSTSGFTPSGG-----------SSSVSMIASRKPTDGASSSNCVTD---ISHLVRKKRKPEEESPRKD---------------------DAKKAKQEPEVNGGSGDTISTGTEVAENMEEEAENKAESRAAVEGTVEAGATVESTAC----------- Orcinus_orca ------------------------------------------------------------MAAESTATAAITAELVSADKIEEDAPAPSTSTDKVESLDVDSE------------------------AKKLLGL--GQKHLVM-GDIPAAVNAFQEAASLLGKKY----------------G-ETANECGEAFFFYGKSLL-ELARMENGVL-GNALEGVHVEEEEGEKTEE-ETLVENNDNIDETEGSE-----------------------------------------------------------------------------------------------------------------------------------------------------------------EEDKENDKAEETPNDSL---------------------------------------LENKSLQENEEEE---------------IGNLELAWDMLDLAKIIFKRQ---------DTKEAQ-----------------------------LYAAQAHLKLGEVSVESENYIQAVEEFQACLNLQEQYL----E-AHDRLLAETHYQLGLAYGYNSQ--------------------------------------YDEAVAQFSKSIEVIEK-----RMAVLNEHMKEA------------------------------EGSPTEYEKE---------------IEE-LK-ELLPEIREKIEDAKES------QRSGNVAEL-----------ALKATLVESSTSGFTPSGG-----------GSSASMIACRKPTDGASSSNCVTD---ISHLVRKKRKPEEESPRKE---------------------DAKKAKQEPEVNGGSGDAVSSGTEVSENMEEEAENQAECRAAVEGTVEAGATVESTAC----------- Albugo_laibachii -----------------MAPNDIFQYDLTEFQSGNLRANKDLEATLFEFSTTSSNMPIYYDGSIISTNLTTPHCKSLPECGGKTSFNVGITVFRTLDAILMKEGEKGSRTNII---------VEAAKQDPRFQR--GLCLLKE-HDYEAAVTIFEDLLKTKVELK----------------KTSEALELAPIYYEYGNALL-SLVEGTANVF-GNVLDG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SEKHSDKGTDHGQEEKS---------------------------------------SQFRNESDDNPIEENVV-----------KDDLELAWEMLEVARVIYTRH---------PEDLSI----------------------------EKELARVYMRLGDLSMESENFTRAKQDYENSLVLNKKILKITRE-SDTTPLADLYCCLAISCIYQDPSQPQINLDQGCTDEAPVEQDVDAKDPVNVESSVSRQRLEEEGLKYYVLAGRVMAE-----NIHRLAEKCSPTITSFIKERIPAYNTDGTGMKDQPNALGKGKRKQRRDPDLE---------------LLF-IK-HSMANVRQDFLALSSTESS---ADEMKLLEHVDIYV------ELKEKVDGIREGFGWDLDT--DTE------------KPIGTTTIGFQSSSNAPT---IGTVVSAPEKTSVNIIPVVK--------------------KGKTTAT------NESEKKVKDVPSEAS----------------------------------------- Thalassiosira_pseudonana ----------------------------------------------------------------------MAATGPSSPQEASASTAVVTQGKSAADPTTTTTTMPTYHR-----------------TKSLPSHALAKQYLNT-GQFNQALEVLEESLGEMHERLAELDGAAASSEGADKGGDDMHPALAPLYYLYGTTLL--YLVEESDVMMNGKGEIQVNDNEDDNDESP-PAAHSPQDEEEEEEEAP----------------------------------------------------------------------------------------------------------------------------------------SDPAEDLQIAWENLETARSIMSKMVEEFSKEEEDAIVIKSVG---------------------------------------KSEEVDEDNSNVN---------------NND--------EKKMMTYTKD---------QQTEIL-----------------------------LDLAKVHSRLGDLQKANGNSTGSISDYIISLSIRAKCL----D-RYDKLVADAHFSLAQAYVEAPNSQARMEDEAAGIVAALGGGEESGSGGHRELTEEELAEFREKSCDHYLACGVSFAG-----LLAKMCGVDADEITKVEDASLNSGGRGAAAAATASTASSVGVHSETLAILRKRISTLQPLASTDNDTFTD-IC-EMLDEIQEALDSAEGTEQA---LKGLAVMKANEIRKHSGKGGEGETVLEEGGATTTIGFGN--VASSCAASSASGTTIGFGSGSGAAASSSATAAP---TMMVVKKKKKKPQSAEEDASA-------------------KRAKTK--------------------------------------------------------------- Maylandia_zebra --------------------------------------------------------------------MPEETSVASSSESAEEKPCSSTAAAAGSSVEVLEE------------------------AKKLIGT--GKRHLVM-GDVVSAVNVFQEACSMLAEKY----------------G-DTADECGEAFFLCGKSLL-ELARMENSVL-GNALEGVPEESEEEEQPS--SSNVESPDNLDDDDD-------------------------------------------------------------------------------------------------------------------------------------------------------------------DDDDDDDDDDDDGEKNG---------------------------------------QDKASSYRTEEEE---------------VGNLQLAWEMLEVAKVIYKRK---------ESTEDQ-----------------------------LMAAQAYLKLGEVSAESGNYPQALDDFQECLALQLKYL----P-PHIRLLAETHYHVATTLCYMDQ--------------------------------------YSQAIQHYNSSIKVIET-----RLAMLQEVIDAAEG----------------------------ADGAAEEKTE---------------LDE-LK-LLLPDIREKVEDAKES------QKTASAASQ-----------AIQQTLGGASTSSAFLCEN------GSTSSAAFATTSQVPVKTESSSSSKAVSD---ISHLVRKKRKPEDESPVKDT--------------------DAKQAKQEATVNGSGDSSASNGNGVQEGKSQESATQSASVESPA------------------------- Taeniopygia_guttata --------------------------------------------------------------------------------MEEELAAPSTSTDKTDSMDVDGE------------------------SKKLLGL--GQKHLVM-GNIPAAVNAFQEAASLLGKKY----------------G-ETANECAEAFFYYGKSLL-ELARMENGVL-GNALEGVQVEEEGEKAEDD-----SALPAADETEESE-----------------------------------------------------------------------------------------------------------------------------------------------------------------EEDKENDKADDDKEN-----------------------------------------ELTVEDKESEEDE---------------IGNLELAWDMLELAKVIYKRQ---------ETKEAQ-----------------------------LHAAQAHLKLGEVSIESENYTQAIEEFQACLALQQKYL----E-AHDRLLAESHYQLALAYHYNSD--------------------------------------FDEAVLQFGKSMEVIDK-----RLAILTERIKKT------------------------------DTGSPEDEKE---------------IEE-LK-GLLPEIKEKIEDSKES------QKSAKVAEL-----------GLKATLVGTTSGFAQSEDS--GSVSTIPVRKGADGASQCVQTSLI?SGKRGNQR----RRLIRETMKPRNLNQNQLSMVVVG--------TLSPVEMRLQKKWKRRWAASQESGLCFLFYFPPLCSGMVLCLVDVLVLLPAVRHKVSQMRRRLFLVGRVHVVLWC- Candida_albicans ------------------------------------------------------------------------------------------------MSNYSTE------------------------VAKLISE--GSRAYSS-KDFDLASEKYGEACEEYSKSH-------------------QGNEDADLLFLYGKAVF-QSGVSKSEVF-GG-----KPAEPEVETENS-ESKEEESKPETDKTDDT-----------------------------------------------------------------------------------------------------------------------------------------------------------------FQFYADGDGEEEDGEEN---------------------------------------EEPNEDENNDEDAN--------------KSDFEVAWELLDLARALFEEK---------LESLDK------GDLKPPYLTQDTDESSNDYIVVLKKLSETYDILGEVSLEAENFNQAADDLRKCLELRLELF----S-DTSSLISESHYKLALALEFQSDDSNS----------------------------------RKNAAEQMKLAIESVER-----RNKNENDDSKRKEN----------------------------QEIIDEMKEK---------------YQDLLK-DPSEEIKMQQLDIIKGIL----GEEASGSEQ-----------SAGAAIVNNLQTMVKKKQN-------------------------KEETKTVVND---LSGMVRKRKKQDANDD------------------------KTKKLKSE------------------------------------------------------------- Schizosaccharomyces_japonicus ----------------------------------------------------------------------------------------------------MET------------------------IDQLVVQ--GNKAFSQ-KHYEIAAEKYSDALEVLEQKN----------------G-PDNIENRNVLWLYGRTLF-EIALSKSQVL-GGGITPAIEEQQQKETDSG-PTVVGSFAFTGDKLEDR-------------------------------------------------------------------------------------------------------------------------------------VERDDAAEKANDVKESTAT---------ATSEAASSNGSEKTEAA---------------------------------------TAASPTPAAAVAA---------------EDDFGLAWEVLDLCRVLQTRA---------VEQLDS-------------------------KDEKSRLADVLDLLGEISLENESFEQAAQDLQEALLWKQQVL----E-ANSTLLSEAHYKLALALEFTALEDGSG---------------------------------KKEALKHVEAAADIIQH-----VLDAKRAATSS-------------------------------KKGKEKEDPT---------------LTS-FQ-QMLDDLHQKAQDLQ--------AEEKPDLEK-----------ELTTSAVAGSLLSAPRDQL--QKL--------------------VADAIQNAND---LGSLVKRKRPKTDDGEKGE---------------------KAKRAK--------------------------------------------------------------- choanoflagellida_Salpingoecidae -------------------------------------------------------------------------------------------MSEVQSAELPRE------------------------HAEVFAA--AKSLYHK-DEVDQAGAILSDLLETMVEQF----------------G-QLGGPCARVYQLYGLCLI-ASARKEAPMMAAEDLMRLADPSAQAAAPSA-APAASAASASSTSKGAA------------------------------------------------------------------------------------------------------------------------SASASSKPSTASTTEKKAEQSPRDGNDDDDDD---------DGQLDDDDEGDGDEKAG---------------------------------------DNQQEGQAAEGDGEQEDD----------ASLVQVGWECLECARVIYSRL---------PDSEET----------------------------RTRQADVHFELGSVYLETDQYREAEEELEQCVALRRKWR------PSTRDLAQALFQLGIAHRQLKQ--------------------------------------SQKAIAAFSEAVDILDA-----LIREVDGKSDK------------------------------------RSQRS---------------LRD-LK-AVRAEVAAHRMQ------------------------------AMQQAVAPTASSSGNVASM--TDT------------------FDAPTVTSPTTH---IAAVKPRKKTKAKNKAKAT---------------------ADTKAKVVPSKGDDGQADAKKAKMSKE------------------------------------------ Dictyostelium_fasciculatum MVLCMNQFHTNPAMSWIRHNAHQHGVDACHVYVINRADTKNININTSTGYTPNQVVMGAKENDKNCDQSTLVVLDCALPLEIMEESTSTTSTTSTTSTSTTNQSSPERKEIDA---------KDQEIIDNAMGKVKAAKALLDDQDYLSACELLGSSLSALSPIY----------------G-ELAIELAPIYIKYGRALLFSYKVNESDVL-GSKLDN-----NKEGAQEG-EPDEAGEDELDKKEAAS-----------------------------------------------------------------------------------------------------------------------------------------------------------------SSDGEDTSTSTSNATTS---------------------------------------TTTTTGEKKEEGDK--------------AETLEVAWDVLELARVIYEKN---------GTKELE-------------------------------LSDVHMLLGDLNVELENHQDALEEYNIALQLRKKQN----K-KNDREVAEVYYYIGMVYQIKND--------------------------------------AKFAEDSYKKAIEILTG-----ALGDLQSDPTS-------------------------------------TSDD---------------IQD-LK-NVIADLQMRLDEVIPLDTSM--ENIPAFLKE-----------ELIKHLISTSAPPANSSSS--TAT---------------VEAPAVPENNAPVKR---FGNLGKAAKRAAEQKQQQQQQEQSTNSTSSTTLDTSTTQQEKPKRRLQDLMGGEAPPISFSTSSSKPSTTTTTKPVEEIIKQEEKKKKVE------------------- ; END; BEGIN ASSUMPTIONS; TYPESET * UNTITLED = unord: 1 - 968; END; BEGIN TREES; Title Imported_trees; LINK Taxa = Taxa; TRANSLATE 1 Tetrahymena_thermophila, 2 Saccharomyces_cerevisiae, 3 Coccidioides_immitis, 4 Schizosaccharomyces_pombe, 5 Neurospora_crassa, 6 Tetrapisispora_phaffii, 7 Trichosporon_asahii, 8 Cryptococcus_gattii, 9 Tribolium_castaneum, 10 Megachile_rotundata, 11 Danaus_plexippus, 12 Apis_florea, 13 Bombus_terrestris, 14 Drosophila_melanogaster, 15 Drosophila_sechellia, 16 Drosophila_erecta, 17 Salmo_salar, 18 Danio_rerio, 19 Oreochromis_niloticus, 20 Takifugu_rubripes, 21 Xenopus_laevis, 22 Xenopus_tropicalis, 23 Homo_sapiens, 24 Caenorhabditis_elegans, 25 Caenorhabditis_remanei, 26 Caenorhabditis_brenneri, 27 Caenorhabditis_briggsae, 28 Ichthyophthirius_multifiliis, 29 Paramecium_tetraurelia, 30 Halocynthia_roretzi, 31 Ciona_intestinalis, 32 Mus_musculus, 33 Gallus_gallus, 34 Plasmodium_yoelii, 35 Neospora_caninum, 36 Toxoplasma_gondii, 37 Arabidopsis_thaliana, 38 Capsella_rubella, 39 Theobroma_cacao, 40 Cicer_arietinum, 41 Trypanosoma_cruzi, 42 Trypanosoma_brucei, 43 Bos_taurus, 44 Orcinus_orca, 45 Albugo_laibachii, 46 Thalassiosira_pseudonana, 47 Maylandia_zebra, 48 Taeniopygia_guttata, 49 Candida_albicans, 50 Schizosaccharomyces_japonicus, 51 choanoflagellida_Salpingoecidae, 52 Dictyostelium_fasciculatum; TREE Imported_tree_0 = ((((((((((((((43,44)0.8790,23)0.5270,32)0.9850,(33,48)1.0000)0.9890,(21,22)1.0000)0.9120,((17,19)0.9310,(18,(20,47)0.9960)0.6550)0.9960)0.7510,(30,31)1.0000)0.9920,(9,(11,(10,(12,13)0.4140)1.0000)0.6810)0.5760)0.7360,(27,(24,(25,26)0.5360)0.9390)1.0000)0.6460,(16,(14,15)0.7570)1.0000)0.3960,((7,8)1.0000,((2,6)0.7990,((4,50)1.0000,(49,(3,5)0.9950)0.4500)0.9350)0.4090)0.8290)0.1570,(40,(39,(37,38)0.9990)0.8700)1.0000)0.1050,((46,52)0.4900,(51,(((35,36)0.9990,34)1.0000,(45,(29,(1,28)1.0000)0.9850)0.3320)0.2190)0.1130)0.0830)1.0000,(41,42)1.0000); END; BEGIN CODONS; CODESET * UNTITLED = universal: 1 - 968; END; BEGIN MESQUITECHARMODELS; ProbModelSet * UNTITLED = 'Mk1 (est.)': 1 - 968; END; Begin MESQUITE; MESQUITESCRIPTVERSION 2; TITLE AUTO; tell ProjectCoordinator; timeSaved 1402035378207; getEmployee #mesquite.minimal.ManageTaxa.ManageTaxa; tell It; setID 0 4069361247227994715; endTell; getEmployee #mesquite.charMatrices.ManageCharacters.ManageCharacters; tell It; setID 0 1426677942554646163; mqVersion 275; checksumv 0 3 3713319416 null getNumChars 968 numChars 968 getNumTaxa 52 numTaxa 52 short false bits 1048575 states 1048575 sumSquaresStatesOnly 1.70272066273234E14 sumSquares 1.70272066273234E14 longCompressibleToShort false usingShortMatrix false NumFiles 1 NumMatrices 1; mqVersion; endTell; getWindow; tell It; suppress; setResourcesState true false 100; setPopoutState 400; setExplanationSize 0; setAnnotationSize 0; setFontIncAnnot 0; setFontIncExp 0; setSize 700 467; setLocation 8 8; setFont SanSerif; setFontSize 10; getToolPalette; tell It; endTell; setActive; desuppress; endTell; endTell; end;