#NEXUS [written Thu Sep 21 16:35:11 SGT 2017 by Mesquite version 3.3 (build 854) at 176-46.priv23.nus.edu.sg/172.23.176.46] BEGIN TAXA; TITLE Taxa; DIMENSIONS NTAX=44; TAXLABELS Cadophora_finlandica Cadophora_orientamericana_CTC1 Cadophora_orientamericana_CTC2 Cadophora_orientamericana_CTC4 Cadophora_orientamericana_CTC5 Cadophora_orientamericana_MAC2 Cadophora_orientamericana_MDC1 Cadophora_orientamericana_NHC1 Cadophora_orientamericana_NHC2 Cadophora_orientamericana_NHC3 Cadophora_orientamericana_NYC3 Cadophora_orientamericana_NYC6 Cadophora_orientamericana_NYC9 Cadophora_orientamericana_NYC11 Cadophora_orientamericana_NYC12 Cadophora_orientamericana_VAC1 Cadophora_orientamericana_VTC1 Cadophora_orientamericana_OHC1 Cadophora_spadicis_RIC1 Cadophora_spadicis_111743BT Cadophora_spadicis_RIC3 Cadophora_spadicis_QCC1 Cadophora_fastigiata_A168 Cadophora_melinii_A164 Cadophora_melinii_U11 Cadophora_melinii_ONC1 'Cadophora novi-eboraci 101359BT' 'Cadophora novi-eboraci NYC2' 'Cadophora novi-eboraci NYC1' 'Cadophora novi-eboraci NYC13' 'Cadophora novi-eboraci NYC14' Cadophora_malorum_A167 'Cadophora luteo-olivacea A175' 'Cadophora luteo-olivacea A19' 'Cadophora luteo-olivacea A41' 'Cadophora luteo-olivacea A42' 'Cadophora luteo-olivacea U5' 'Cadophora luteo-olivacea U8' 'Cadophora luteo-olivacea U17' 'Cadophora luteo-olivacea U7' 'Cadophora luteo-olivacea U21' 'Cadophora luteo-olivacea U22' 'Cadophora luteo-olivacea U53' 'Cadophora luteo-olivacea U56' ; END; BEGIN CHARACTERS; TITLE BT; DIMENSIONS NCHAR=538; FORMAT DATATYPE = DNA GAP = - MISSING = ?; MATRIX Cadophora_finlandica GCACCCCTGAAT---TCCTACCCCACTACCA-CCTCCACCTCAAGAGAGATGGCC--TTCGCTGACCATGTGTTCT-TC--AATCTATAGGTTCATCTCCAGACTGGCCAATGTGGCAACCAGATCGG---AGCCGCTTTTTGT-TC--GTCTCCCCTCACC------------------------------------------------------GTCGCGAT---------TTGATATACG------------------TTG-------CTAATAACCACACAGGGCAAACCATCTCCGGCGAGCATGGCCTTGATGGCTCTGGCGTGTAAGCA--------------------CTCT---GGCTGTACATTTTCTTGTTTACATCTCGTTGACACTCT--ACAGCTACAATGGCACGTCTGATCTTCAGCTTGAGCGCATGAATGTCTACTTCAACGAGGTTGGTATCATC--------TGCCATTCATCTAAACATTGCTAACG-CGTATCAGGCCTCCGGTAACAAGTATGTT Cadophora_orientamericana_CTC1 TTACCCCTGAAT---TGCTACCCCACTACCC-CTTCGACCTCAA------CGACCGATTTGCTGATC-TA----CTAT---GT---ACAGGTTCATCTTCAAACTGGCCAGTGTGGTAACCAGATCGG---TGCTGCT--TTGTAT---GTATTTCCTGACC-TATCGCTTACTTCAATGCTAATTCATGAATAGCTGGTGCGTACAA-CCTGGGAGTCGCGATAAACT---CCTGATACACGAACGCGACATGAAGGACTTTAATGAATACTGATAAACATACAGG-CAAACAATCTCAGGCGAGCATGGTCTTGATGGATCCGGCGTGTAAGTTTGCCCTTGTGCTAACATGGCCTCTCGAGGCT--------CCTTGTCTACTCCAGGCTGACATAATTGATAGCTACAATGGCACATCTGATCTTCAACTCGAGCGCTTGAATGTCTACTTCAACGAGGTTAGTAACAACAACGAC--AGCTAGCATAGTATAAGTTACTAACT-AAGTCTAGGCCTCTGGTAACAAGTATGTT Cadophora_orientamericana_CTC2 TTACCCCTGAAT---TGCTACCCCACTACCC-CTTCGACCTCAA------CGACCGATTTGCTGATC-TA----CTAT---GA---ACAGGTTCATCTTCAAACTGGCCAGTGTGGTAACCAGATCGG---TGCTGCT--TTGTAT---GTATTTCCTGACC-TATCGCTTACTTCAATGCTAATTCATGAATAGCTGGTGCGTACAA-CCTGGGAGTCGCGATAAACT---CCTGATACACGAACGCGACATGAAGGACTTTAATGAATACTGATAAACATACAGG-CAAACAATCTCAGGCGAGCATGGTCTTGATGGATCCGGCGTGTAAGTTTGCCCTTGTGCTAACATGGCCTCTCGAGGCT--------CCTTGTCTACTCCAGGCTGACATAATTGATAGCTACAATGGCACATCTGATCTTCAACTCGAGCGCTTGAATGTCTACTTCAACGAGGTTAGTAACAACAACGAC--AGCTAGCGTAGTGTAAGTTACTAACT-AAGTCTAGGCCTCTGGTAACAAGTATGTT Cadophora_orientamericana_CTC4 TTACCCCTGAAT---TGCTACCCCATTACCC-CTTCGACCTCAA------CGACCGATTTGCTGATC-TA----CTAT---GT---ACAGGTTCATCTTCAAACTGGCCAGTGTGGTAACCAGATCGG---TGCTGCT--TTGTAT---GTATTTCCTGACC-TATCGCTTACTTCAATGCTAATTCATGAATAGCTGGTGCGTACAA-CCTGGGAGTCGCGATAAACT---CCTGATACACGAACGCGACATGAAGGACTTTAATGAATACTGATAAACATACAGG-CAAACAATCTCAGGCGAGCATGGTCTTGATGGATCCGGCGTGTAAGTTTGCCCTTGTGCTAACATGGCCTCTCGAGGCT--------CCTTGTCTACTCCAGGCTGACATAATTGATAGCTACAATGGCACATCTGATCTTCAACTCGAGCGCTTGAATGTCTACTTCAACGAGGTTAGTAACAACAACGAC--AGCTAGCATATTGTAAGTTACTAACT-AAGTCTAGGCCTCTGGTAACAAGTATGTT Cadophora_orientamericana_CTC5 TTACCCCTGAAT---TGCTACCCCACTACCC-CTTCGACCTCAA------CGACCGATTTGCTGATC-TA----CTAT---GA---ACAGGTTCATCTTCAAACTGGCCAGTGTGGTAACCAGATCGG---TGCTGCT--TTGTAT---GTATTTCCTGACC-TATCGCTTACTTCAATGCTAATTCATGAATAGCTGGTGCGTACAA-CCTGGGAGTCGCGATAAACT---CCTGATACACGAACGCGACATGAAGGACTTTAATGAATACTGATAAACATACAGG-CAAACAATCTCAGGCGAGCATGGTCTTGATGGATCCGGCGTGTAAGTTTGCCCTTGTGCTAACATGGCCTCTCGAGGCT--------CCTTGTCTACTCCAGGCTGACATAATTGATAGCTACAATGGCACATCTGATCTTCAACTCGAGCGCTTGAATGTCTACTTCAACGAGGTTAGTAACAACAACGAC--AGCTAGCGTAGTGTAAGTTACTAACT-AAGTCTAGGCCTCTGGTAACAAGTATGTT Cadophora_orientamericana_MAC2 TTACCCCTGAAT---TGCTACCCCACTACCC-CTTCGACCTCAA------CGACCGATTTGCTGATC-TA----CTAT---GT---ACAGGTTCATCTTCAAACTGGCCAGTGTGGTAACCAGATCGG---TGCTGCT--TTGTAT---GTATTTCCTGACC-TATCGCTTACTTCAATGCTAATTCATGAATAGCTGGTGCGTACAA-CCTGGGAGTCGCGATAAACT---CCTGATACACGAACGCGACATGAAGGACTTTAATGAATACTGATAAACATACAGG-CAAACAATCTCAGGCGAGCATGGTCTTGATGGATCCGGCGTGTAAGTTTGCCCTTGTGCTAACATGGCCTCTCGAGGCT--------CCTTGTCTACTCCAGGCTGACATAATTGATAGCTACAATGGCACATCTGATCTTCAACTCGAGCGCTTGAATGTCTACTTCAACGAGGTTAGTAACAACAACGAC--AGCTAGCATAGTATAAGTTACTAACT-AAGTCTAGGCCTCTGGTAACAAGTATGTT Cadophora_orientamericana_MDC1 TTACCCCTGAAT---TGCTACCCCACTACCC-CTTCGACCTCAA------CGACCGATTTGCTGATC-TA----CTAT---GT---ACAGGTTCATCTTCAAACTGGCCAGTGTGGTAACCAGATCGG---TGCTGCT--TTGTAT---GTATTTCCTGACC-TATCGCTTACTTCAATGCTAATTCATGAATAGCTGGTGCGTACAA-CCTGGGAGTCGCGATAAACT---CCTGATACACGAACGCGACATGAAGGACTTTAATGAATACTGATAAACATACAGG-CAAACAATCTCAGGCGAGCATGGTCTTGATGGATCCGGCGTGTAAGTTTGCCCTTGTGCTAACATGGCCTCTCGAGGCT--------CCTTGTCTACTCCAGGCTGACATAATTGATAGCTACAATGGCACATCTGATCTTCAACTCGAGCGCTTGAATGTCTACTTCAACGAGGTTAGTAACAACAACGAC--AGCTAGCATATAGTAAGTTACTAACT-AAGTCTAGGCCTCTGGTAACAAGTATGTT Cadophora_orientamericana_NHC1 TTACCCCTGAAT---TGCTACCCCACTACCC-CTTCGACCTCAA------CGACCGATTTGCTGATC-TA----CTAT---GA---ACAGGTTCATCTTCAAACTGGCCAGTGTGGTAACCAGATCGG---TGCTGCT--TTGTAT---GTATTTCCTGACC-TATCGCTTACTTCAATGCTAATTCATGAATAGCTGGTGCGTACAA-CCTGGGAGTCGCGATAAACT---CCTGATACACGAACGCGACATGAAGGACTTTAATGAATACTGATAAACATACAGG-CAAACAATCTCAGGCGAGCATGGTCTTGATGGATCCGGCGTGTAAGTTTGCCCTTGTGCTAACATGGCCTCTCGAGGCT--------CCTTGTCTACTCCAGGCTGACATAATTGATAGCTACAATGGCACATCTGATCTTCAACTCGAGCGCTTGAATGTCTACTTCAACGAGGTTAGTAACAACAACGAC--AGCTAGCATATTGTAAGTTACTAACT-AAGTCTAGGCCTCTGGTAACAAGTATGTT Cadophora_orientamericana_NHC2 TTACCCCTGAAT---TGCTACCCCACTACCC-CTTCGACCTCAA------CGACCGATTTGCTGATC-TA----CTAT---GT---ACAGGTTCATCTTCAAACTGGCCAGTGTGGTAACCAGATCGG---TGCTGCT--TTGTAT---GTATTTCCTGACC-TATCGCTTACTTCAATGCTAATTCATGAATAGCTGGTGCGTACAA-CCTGGGAGTCGCGATAAACT---CCTGATACACGAACGCGACATGAAGGACTTTAATGAATACTGATAAACATACAGG-CAAACAATCTCAGGCGAGCATGGTCTTGATGGATCCGGCGTGTAAGTTTGCCCTTGTGCTAACATGGCCTCTCGAGGCT--------CCTTGTCTACTCCAGGCTGACATAATTGATAGCTACAATGGCACATCTGATCTTCAACTCGAGCGCTTGAATGTCTACTTCAACGAGGTTAGTAACAACAACGAC--AGCTAGCATATTGTAAGTTACTAACT-AAGTCTAGGCCTCTGGTAACAAGTATGTT Cadophora_orientamericana_NHC3 TTACCCCTGAAT---TGCTACCCCATTACCC-CTTCGACCTCAA------CGACCGATTTGCTGATC-TA----CTAT---GA---ACAGGTTCATCTTCAAACTGGCCAGTGTGGTAACCAGATCGG---TGCTGCT--TTGTAT---GTATTTCCTGACC-TATCGCTTACTTCAATGCTAATTCATGAATAGCTGGTGCGTACAA-CCTGGGAGTCGCGATAAACT---CCTGATACACGAACGCGACATGAAGGACTTTAATGAATACTGATAAACATACAGG-CAAACAATCTCAGGCGAGCATGGTCTTGATGGATCCGGCGTGTAAGTTTGCCCTTGTGCTAACATGGCCTCTCGAGGCT--------CCTTGTCTACTCCAGGCTGACATAATTGATAGCTACAATGGCACATCTGATCTTCAACTCGAGCGCTTGAATGTCTACTTCAACGAGGTTAGTAACAACAACGAC--AGCTAGCGTAGTGTAAGTTACTAACT-AAGTCTAGGCCTCTGGTAACAAGTATGTT Cadophora_orientamericana_NYC3 TTACCCCTGAAT---TGCTACCCCACTACCC-CTTCGACCTCAA------CGACCGATTTGCTGATC-TA----CTAT---GT---ACAGGTTCATCTTCAAACTGGCCAGTGTGGTAACCAGATCGG---TGCTGCT--TTGTAT---GTATTTCCTGACC-TATCGCTTACTTCAATGCTAATTCATGAATAGCTGGTGCGTACAA-CCTGGGAGTCGCGATAAACT---CCTGATACACGAACGCGACATGAAGGACTTTAATGAATACTGATAAACATACAGG-CAAACAATCTCAGGCGAGCATGGTCTTGATGGATCCGGCGTGTAAGTTTGCCCTTGTGCTAACATGGCCTCTCGAGGCT--------CCTTGTCTACTCCAGGCTGACATAATTGATAGCTACAATGGCACATCTGATCTTCAACTCGAGCGCTTGAATGTCTACTTCAACGAGGTTAGTAACAACAACGAC--AGCTAGCATAGTATAAGTTACTAACT-AAGTCTAGGCCTCTGGTAACAAGTATGTT Cadophora_orientamericana_NYC6 TTACCCCTGAAT---TGCTACCCCACTACCC-CTTCGACCTCAA------CGACCGATTTGCTGATC-TA----CTAT---GT---ACAGGTTCATCTTCAAACTGGCCAGTGTGGTAACCAGATCGG---TGCTGCT--TTGTAT---GTATTTCCTGACC-TATCGCTTACTTCAATGCTAATTCATGAATAGCTGGTGCGTACAA-CCTGGGAGTCGCGATAAACT---CCTGATACACGAACGCGACATGAAGGACTTTAATGAATACTGATAAACATACAGG-CAAACAATCTCAGGCGAGCATGGTCTTGATGGATCCGGCGTGTAAGTTTGCCCTTGTGCTAACATGGCCTCTCGAGGCT--------CCTTGTCTACTCCAGGCTGACATAATTGATAGCTACAATGGCACATCTGATCTTCAACTCGAGCGCTTGAATGTCTACTTCAACGAGGTTAGTAACAACAACGAC--AGCTAGCATAGTATAAGTTACTAACT-AAGTCTAGGCCTCTGGTAACAAGTATGTT Cadophora_orientamericana_NYC9 TTACCCCTGAAT---TGCTACCCCACTACCC-CTTCGACCTCAA------CGACCGATTTGCTGATC-TA----CTAT---GT---ACAGGTTCATCTTCAAACTGGCCAGTGTGGTAACCAGATCGG---TGCTGCT--TTGTAT---GTATTTCCTGACC-TATCGCTTACTTCAATGCTAATTCATGAATAGCTGGTGCGTACAA-CCTGGGAGTCGCGATAAACT---CCTGATACACGAACGCGACATGAAGGACTTTAATGAATACTGATAAACATACAGG-CAAACAATCTCAGGCGAGCATGGTCTTGATGGATCCGGCGTGTAAGTTTGCCCTTGTGCTAACATGGCCTCTCGAGGCT--------CCTTGTCTACTCCAGGCTGACATAATTGATAGCTACAATGGCACATCTGATCTTCAACTCGAGCGCTTGAATGTCTACTTCAACGAGGTTAGTAACAACAACGAC--AGCTAGCGTAGTGTAAGTTACTAACT-AAGTCTAGGCCTCTGGTAACAAGTATGTT Cadophora_orientamericana_NYC11 TTACCCCTGAAT---TGCTACCCCATTACCC-CTTCGACCTCAA------CGACCGATTTGCTGATC-TA----CTAT---GA---ACAGGTTCATCTTCAAACTGGCCAGTGTGGTAACCAGATCGG---TGCTGCT--TTGTAT---GTATTTCCTGACC-TATCGCTTACTTCAATGCTAATTCATGAATAGCTGGTGCGTACAA-CCTGGGAGTCGCGATAAACT---CCTGATACACGAACGCGACATGAAGGACTTTAATGAATACTGATAAACATACAGG-CAAACAATCTCAGGCGAGCATGGTCTTGATGGATCCGGCGTGTAAGTTTGCCCTTGTGCTAACATGGCCTCTCGAGGCT--------CCTTGTCTACTCCAGGCTGACATAATTGATAGCTACAATGGCACATCTGATCTTCAACTCGAGCGCTTGAATGTCTACTTCAACGAGGTTAGTAACAACAACGAC--AGCTAGCGTAGTGTAAGTTACTAACT-AAGTCTAGGCCTCTGGTAACAAGTATGTT Cadophora_orientamericana_NYC12 TTACCCCTGAAT---TGCTACCCCACTACCC-CTTCGACCTCAA------CGACCGATTTGCTGATC-TA----CTAT---GT---ACAGGTTCATCTTCAAACTGGCCAGTGTGGTAACCAGATCGG---TGCTGCT--TTGTAT---GTATTTCCTGACC-TATCGCTTACTTCAATGCTAATTCATGAATAGCTGGTGCGTACAA-CCTGGGAGTCGCGATAAACT---CCTGATACACGAACGCGACATGAAGGACTTTAATGAATACTGATAAACATACAGG-CAAACAATCTCAGGCGAGCATGGTCTTGATGGATCCGGCGTGTAAGTTTGCCCTTGTGCTAACATGGCCTCTCGAGGCT--------CCTTGTCTACTCCAGGCTGACATAATTGATAGCTACAATGGCACATCTGATCTTCAACTCGAGCGCTTGAATGTCTACTTCAACGAGGTTAGTAACAACAACGAC--AGCTAGCATAGTATAAGTTACTAACT-AAGTCTAGGCCTCTGGTAACAAGTATGTT Cadophora_orientamericana_VAC1 TTACCCCTGAAT---TGCTACCCCACTACCC-CTTCGACCTCAA------CGACCGATTTGCTGATC-TA----CTAT---GT---ACAGGTTCATCTTCAAACTGGCCAGTGTGGTAACCAGATCGG---TGCTGCT--TTGTAT---GTATTTCCTGACC-TATCGCTTACTTCAATGCTAATTCATGAATAGCTGGTGCGTACAA-CCTGGGAGTCGCGATAAACT---CCTGATACACGAACGCGACATGAAGGACTTTAATGAATACTGATAAACATACAGG-CAAACAATCTCAGGCGAGCATGGTCTTGATGGATCCGGCGTGTAAGTTTGCCCTTGTGCTAACATGGCCTCTCGAGGCT--------CCTTGTCTACTCCAGGCTGACATAATTGATAGCTACAATGGCACATCTGATCTTCAACTCGAGCGCTTGAATGTCTACTTCAACGAGGTTAGTAACAACAACGAC--AGCTAGCATAGTATAAGTTACTAACT-AAGTCTAGGCCTCTGGTAACAAGTATGTT Cadophora_orientamericana_VTC1 TTACCCCTGAAT---TGCTACCCCACTACCC-CTTCGACCTCAA------CGACCGATTTGCTGATC-TA----CTAT---GT---ACAGGTTCATCTTCAAACTGGCCAGTGTGGTAACCAGATCGG---TGCTGCT--TTGTAT---GTATTTCCTGACC-TATCGCTTACTTCAATGCTAATTCATGAATAGCTGGTGCGTACAA-CCTGGGAGTCGCGATAAACT---CCTGATACACGAACGCGACATGAAGGACTTTAATGAATACTGATAAACATACAGG-CAAACAATCTCAGGCGAGCATGGTCTTGATGGATCCGGCGTGTAAGTTTGCCCTTGTGCTAACATGGCCTCTCGAGGCT--------CCTTGTCTACTCCAGGCTGACATAATTGATAGCTACAATGGCACATCTGATCTTCAACTCGAGCGCTTGAATGTCTACTTCAACGAGGTTAGTAACAACAACGAC--AGCTAGCGTAGTGTAAGTTACTAACT-AAGTCTAGGCCTCTGGTAACAAGTATGTT Cadophora_orientamericana_OHC1 TTACCCCTGAAT---TGCTACCCCACTACCC-CTTCGACCTCAA------CGACCGATTTGCTGATC-TA----CTAT---GA---ACAGGTTCATCTTCAAACTGGCCAGTGTGGTAACCAGATCGG---TGCTGCT--TTGTAT---GTATTTCCTGACC-TATCGCTTACTTCAATGCTAATTCATGAATAGCTGGTGCGTACAA-CCTGGGAGTCGCGATAAACT---CCTGATACACGAACGCGACATGAAGGACTTTAATGAATACTGATAAACATACAGG-CAAACAATCTCAGGCGAGCATGGTCTTGATGGATCCGGCGTGTAAGTTTGCCCTTGTGCTAACATGGCCTCTCGAGGCT--------CCTTGTCTACTCCAGGCTGACATAATTGATAGCTACAATGGCACATCTGATCTTCAACTCGAGCGCTTGAATGTCTACTTCAACGAGGTTAGTAACAACAACGAC--AGCTAGCATATTGTAAGTTACTAACT-AAGTCTAGGCCTCTGGTAACAAGTATGTT Cadophora_spadicis_RIC1 TTACCCCTGAAT---TGCTACCCCACTACCC-CTTCAACCTCAA------CGACCGATTTGCTGACC-TA----CTAT---CT---ACAGGTTCATCTTCAAACTGGCCAGTGTGGAAACCAGATTGG---TGCTGCT--TTGTAT---GTATTCCCTGACC-TTTCGCTCGCTTCAATGCTAATTCATGAACAGCTGGTGCGAACAA-CCTCGGCGTCGCGACAAACT---CCAGATACACGAACGCGACACAGAGGACTTCAATAAATGCTGATAAACATACAGG-CAAACAATCTCAGGCGAGCATGGTCTTGATGGATCCGGCGTGTAAGTTTGCTCTTGTGCTGGCATAGC----------T--------CCTCGTTTACTCTAGGCTGACATAGTTGATAGCTACAATGGCACGTCTGATCTTCAACTCGAGCGCTTAAACGTCTACTTCAACGAGGCTAGTAACAACAACCAC--AGTTAGCATAATGTTAGTTGCTAACTCTGGTCTAGGCCTCTGGTAACAAGTATGTT Cadophora_spadicis_111743BT TTACCCCTGAAT---TGCTACCCCACTACCC-CTTCAACCTCAA------CGACCGATTTGCTGACC-TA----CTAT---CT---ACAGGTTCATCTTCAAACTGGCCAGTGTGGAAACCAGATTGG---TGCTGCT--TTGTAT---GTATTCCCTGACC-TTTCGCTCGCTTCAATGCTAATTCATGAACAGCTGGTGCGTACAA-CCTCGGCGTCGCGACAAACT---CCAGATACACGAACGCGACACAGAGGACTTCAATAAATGCTGATAAACATACAGG-CAAACAATCTCAGGCGAGCTTGGTCTTGTTGGATCCGGCGTGTAAGTTTGCTCTTGTGCTGGCATAGC----------T--------CCTCGTTTACTCTAGGCTGACATAGTTGATAGCTACAATGGCACGTCTGATCTTCAACTCGAGCGCTTAAACGTCTACTTCAACGAGGCTAGTAACAACAACCAC--AGTTAGCATAATGTTAGTTGCTAACTCTAGTCTAGGCCTCTGGTAACAAGTATGTT Cadophora_spadicis_RIC3 TTACCCCTGAAT---TGCTACCCCACTACCC-CTTCAACCTCAA------CGACCGATTTGCTGACC-TA----CTAT---CT---ACAGGTTCATCTTCAAACTGGCCAGTGTGGAAACCAGATTGG---TGCTGCT--TTGTAT---GTATTCCCTGACC-TTTCGCTCGCTTCAATGCTAATTCATGAACAGCTGGTGCGAACAA-CCTCGGCGTCGCGACAAACT---CCAGATACACGAACGCGACACAGAGGACTTCAATAAATGCTGATAAACATACAGG-CAAACAATCTCAGGCGAGCATGGTCTTGATGGATCCGGCGTGTAAGTTTGCTCTTGTGCTGGCATAGC----------T--------CCTCGTTTACTCTAGGCTGACATAGTTGATAGCTACAATGGCACGTCTGATCTTCAACTCGAGCGCTTAAACGTCTACTTCAACGAGGCTAGTAACAACAACCAC--AGTTAGCATAATGTTAGTTGCTAACTCTGGTCTAGGCCTCTGGTAACAAGTATGTT Cadophora_spadicis_QCC1 TTACTCCTGAAT---TGCTACCCTACTACCC-CTTCAACCTCAA------CGACCGATTTGCTGACC-TA----CTAT---CT---ACAGGTTCATCTTCAAACTGGCCAGTGTGGAAACCAGATTGG---TGCTGCT--TTGTAT---GTATTCCCTGACC-TTTCGCTCGCTTCAATGCTAATTCATGAGCAGCTGGTGCGAACAA-CCTCGGCGTCGCGACAAACT---CCACATACACGAACGCGACACAGAGGACTTCAATAAATGCTGATAAACATACAGG-CAAACAATCTCAGGCGAGCATGGTCTTGATGGATCCGGCGTGTAAGTTTGCTCTTGTGCTGGCATAGC----------T--------CCTCGTTTACTCTAGGCTGACATAGTTGATAGCTACAATGGCACGTCTGATCTTCAACTCGAGCGCTTAAACGTCTACTTCAACGAGGCTAGTAACAACAACCAC--AGTTAGCATAATGTTAGTTGCTAACTCTGGTCTAGGCCTCTGGTAACAAGTATGTT Cadophora_fastigiata_A168 TTACCCCTGAAT---TGCTACCCCACTACCC-CTTCAACCTCAA------CGACCGATTTGCTGACC-TA----CTAT---CT---ACAGGTTCATCTTCAAACTGGCCAGTGTGGAAACCAGATTGG---TGCTGCT--TTGTAT---GTATTCCCTGACC-TTTCGCTCGCTTCAATGCTAATTCATGAACAGCTGGTGCGTACAA-CCTCGGCGTCGCGACAAATT---CCAGATACACGAACGCGACACAAAGGACTTCAATAAATGCTGACTAACATACAGG-CAAACAATCTCAGGCGAGCATGGTCTTGATGGATCCGGCGTGTAAGTT-GCTCTTGTGCTGGCATAGC----------T--------CCTCAAGTACTCTAGGCTGACATAGTTGATAGCTACAATGGCACGTCTGATCTTCAACTCGAGCGCTTGAACGTCTACTTCAACGAGGTTAGTAACAATAACCAT--AGTTAGCATAATGTCAGGTGCTAAATTTGGGCTAGGCCTCTGGTAACAAGTATGTT Cadophora_melinii_A164 TTACCCCTGAAT---TGCTACCCCACTACCC-CTTCGACCTCTA------CGACCGACTTGCTGACC-TA----CTAT---CT---ACAGGTTCATCTTCAAACTGGCCAGTGTGGAAACCAGATTGG---TGCTGCT--TTGTAT---GTATTTCCTGACC-TTTCGCTTGCTTCAATGCTAATTCATGAATAGCTGGTGCGTAAAA-CCTCAGCGTCGCGACAATCT---CCTGATACATCAACGCGACATTAAGGACTTCAATGAATGCTGATAAACATACAGG-CAAACAATCTCAGGCGAGCATGGTCTTGATGGATCCGGCGTGTAAGTTTGCTCTTGTGCTGGCATAGCCTTTCGAGGCT--------CCTTGTTTACTCCAGGCTGACATAGTTGATAGCTACAATGGCACGTCTGATCTTCAACTCGAGCGCTTGAACGTCTACTTCAACGAGGTTAGTAACAATAACGAT--AGTTAGCATAATGTCAGGTGCTAAATTTGGGCTAGGCCTCTGGTAACAAGTATGTT Cadophora_melinii_U11 TTACCCCTGAAT---TGCTACCCCACTACCC-CTTCGACCTCTA------CGACCGACTTGCTGACC-TA----CTAT---CT---ACAGGTTCATCTTCAAACTGGCCAGTGTGGAAACCAGATTGG---TGCTGCT--TTGTAT---GTATTTCCTGACC-TTTCGCTTGCTTCAATGCTAATTCATGAATAGCTGGTGCGTAAAA-CCTCAGCGTCGCGACAATCT---CCTGATACATCAACGCGACATTAAGGACTTCAATGAATGCTGATAAACATACAGG-CAAACAATCTCAGGCGAGCATGGTCTTGATGGATCCGGCGTGTAAGTTTGTTCTTGTGCTGGCATAGCCTTTCGAGGCT--------CCTTGTTTACTCCAGGCGGACATAGTTGATAGCTACAATGGCACGTCTGATCTTCAACTCGAGCGCTTGAACGTCTACTTCAACGAGGTTAGTAACAATAACGAT--AGTTAGCATAATGTCAGGTGCTAAATTTGGGCTAGGCCTCTGGTAACAAGTATGTT Cadophora_melinii_ONC1 TTACTCCTGAAT---TGCTACCCCACTACCC-CTTCGACCTCTA------CGACCGAGTTGCTGACC-TA----CTAT---CA---ACAGGTTCATCTTCAAACTGGCCAGTGTGGAAACCAGATTGG---TGCTGCT--TTGAAT---GTATTTCCTGACC-TTTCGCTTGCTTCAATGCTAATTCATGAATAGCTGGTGCGTAAAA-CCTCAGCGTCGCGACAATCT---CCTGATACATCAACGCGACATTAAGGACTTCAATGAATGCTGATAAACATACAGG-CAAACAATCTCAGGCGAGCATGGTCTTGATGGATCCGGCGTGTAAGTTTGTTCTTGTGCTGGCATAGCCTTTCGAGGCT--------CCTTGTTTACTCCAGGCGGACATAGTTGATAGGTACAATGGCACGTGTGATCTTCAACTGGAGCGCTTGAACGTCTACTTCAACGAGGTTAGTAACAATAACGAT--AGTTAGCATAATGTCAGGTGCTAAATTTGGGCTAGGCCTCTGGTAACAAGTATGTT 'Cadophora novi-eboraci 101359BT' TTACCCCTGAATTACTGCTACCCCACTACCCCCTTCGACCTCGA------CAACCATTTCGCTGACC-AT----CTAT---TT---CTAGGTTCATCTTCAAACTGGCCAGTGTGGTAACCAGATTGG---AGCCGCTT-TTGTGA---GTATTTTGACTCCCTCCAGCTTATTGCAATGCTAATGCGGTGTCTAGTGGTGTGTACAG-TCCCGTCGTCGCGACAATCT----TTGATACACGTACGCGACACAAAGGACTTC----GATGCTAATAAACAAACAGG-CAAACAATCTCTGGCGAGCATGGTCTTGATGGATCCGGCGTGTAAG----CTCTTGCGCTGGCATGGCCCTTCGAGGCT--------ACTTGTTTACTCTAGGCTGACATTGTTGATAGCTACAATGGCACATCTGATCTTCAACTCGAGCGCTTGAACGTCTACTTCAACGAGGTTAGTTCCAAGGCCTAGAAATTA--CATACTGTCTGTCGCTAAATATGCTATAGGCTTCTGGTAACAAGTATGTT 'Cadophora novi-eboraci NYC2' TTACCCCTGAATTGCTGCTACCCCACTACCCCCTTCGACCTCGA------CAACCATCTCGCTGACC-AT----CTAT---TT---CTAGGTTCATCTTCAAACTGGCCAGTGTGGTAACCAGATTGG---AGCCGCTT-TTGTGA---GTATCTTCATTCTCTCCAGCTTGTTGCAATACTAATGCCGTGTCTAGTGGTGTGTACAA-TCCCGACGTCGCGACAACCT----TTGATACACGTACGCGACACGAAGGACTCC----GATGCTAACAAACAAACAGG-CAAACAATTTCTGGCGAGCATGGTCTTGATGGATCCGGCGTGTAAGTTTGCTCTTGTGCTGGCAAGGCCCTTTTAGGCT--------ACTTGTTTACTCTAGGCTGACATTGTTGATAGCTACAATGGCACATCTGATCTTCAACTCGAGCGCTTGAACGTCTACTTCAACGAGGTTAGTTGCAAGGCATAG--ATTATGCATACTGACAGTCGCTAAATATGGTATAGGCTTCCGGTAACAAGTATGTT 'Cadophora novi-eboraci NYC1' TTACCCCTGAATTGCTGCTACCCCACTACCCCCTTCGACCTCAA------CAACCATCTCGCTGACC-AT----CTAT---TT---CTAGGTCCATCTTCAAACTGGCCAGTGTGGTAACCAGATTGG---AGCCGCTT-TTGTGA---CCATCTTCATTCTCTCCAGCTTGTTGCAATACTAATGCCGTGTCTGGGGGTGTGTACGA-TCCCGACGTCGCGTCAACAT----TTGATACACGTACGCGACACGAAGGACTCC----GATGCTAACAAACAAACAGG-CAAACAATTTCTGGCGAGCATGGCCTTGATGGATCCGGCGTGTAAGTTTGCTCTTGTGCTGGCAAGGCCCTCTTAGACT--------ACTTGTTTACTCTAGGCTGACATTGTTGATAGCTACAATGCCACATCTGATCTTCAACTCGAGCGCTTGAACGTCTACTTCAACGAGGTTAGTTGCGAGGCATAG--ATTATGCATACTGACAGTCGCTAAATATGGTATAGGCTTCCGGTAACAAGTATGTT 'Cadophora novi-eboraci NYC13' TTACCCCTGAATTGCTGCTACCCCACTACCCCCTTCGACCTCAA------CAACCATCTCGCTGACC-AT----CTAT---TT---CTAGGTCCATCTTCAAACTGGCCAGTGTGGTAACCAGATTGG---AGCCGCTT-TTGTGA---CCATCTTCATTCTCTCCAGCTTGTTGCAATACTAATGCCGTGTCTGGGGGTGTGTACGA-TCCCGACGTCGCGTCAACAT----TTGATACACGTACGCGACACGAAGGACTCC----AATGCTAACAAACAAACAGG-CAAACAATTTCTGGCGAGCATGGTCTTGATGGATCCGGCGTGTAAGTTTGCCCTTGTGCTGGCAAGCCCCTCTTAGGCT--------ACTTGTTGACTCTAGGCTGACATTGTTGATAGCTACAAAGCCACATCTGATCTTCAACTCGAGCGCTTGAACGTCTACTTCAACGAGGTTAGTTGCGAGGCATAG--ATTATGCATACTGACAGTCGCTAAATATGGTATAGGCTTCCGGTAACAAGTATGTT 'Cadophora novi-eboraci NYC14' TTACCCCTGAATTGCTGCTACCCCACTACCCCCTTCGACCTCGA------CAACCATCTCGCTGACC-AT----CTAT---TT---CTAGGTTCATCTTCAAACTGGCCAGTGTGGTAACCAGATTGG---AGCCGCTT-TTGTGA---GTATCTTCATTCTCTCCAGCTTGTTGCAATACTAATGCCGTGTCTAGTGGTGTGTACAA-TCCCGACGTCGCGACAACCT----TTGATACACGTACGCGACACGAAGGACTCC----GATGCTAACAAACAAACAGG-CAAACAATTTCTGGCGAGCATGGTCTTGATGGATCCGGCGTGTAAGTTTGCTCTTGTGCTGGCAAGGCCCTTTTAGGCT--------ACTTGTTTACTCTAGGCTGACATTGTTGATAGCTACAATGGCACATCTGATCTTCAACTCGAGCGCTTGAACGTCTACTTCAACGAGGTTAGTTGCAAGGCATAG--ATTATGCATACTGACAGTCGCTAAATATGGTATAGGCTTCCGGTAACAAGTATGTT Cadophora_malorum_A167 TGAATCGAACTACCCCACCACCCGACGAAAT-CCCAGGGGACGA------CGACCTTTTTGCTGACC-AC----TTATCAACT---ACAGGTTCATCTTCAAACCGGCCAATGCGGTAACCAAATTGGGTATGTTGCCC-TTCAATTCAACCTATACAAAAGCGTTCACTGACTGTGCGATTCTTCTAGTGCTGCCTTTTGGTGAGAAGCCCCAACATCGCGACCTGCCTTACCTGATACATGAACGCGACACAAAGAACCTC----AGTACTGATAAACATGCAGG-CAAACAATCTCAGGAGAGCACGGTCTTGATGGATCCGGAGTGTAAGTTGTACCAAATATTTGCAGACCCATCTACGGCT--------GCCTGTTGACATCTGCTGACTTTTGTTTACAGATACAATGGTACCTCTGATCTCCAACTCGAGCGCCTGAACGTCTACTTCAACGAGGTTCGT---AGCGATAAA--CCAACACATGAATAAAGTCCTAACATTTTCATTAGGCCTCCGGAAACAAGTATGTT 'Cadophora luteo-olivacea A175' TGAGTCGAACTACCCCACTACCCTTCGAAGT-CCCAGGGGAGGA------CGACCTTTTTGCTGACC-AC----TTATCAACT---ACAGGTTCATCTTCAAACCGGACAATGCGGAAACCAATTTGGGTATGTTGCTC-TTCAATTCGACCAATATGAAAGCCTTCCGTGACTGTGCGATTCTTTTAGTGCTGCCTTTTGGTGAGAAGCCCCAATATCGCGACCTGCCTTACCTGATACACGAACGCGACACAAAGAACCTC----AGTACTGATAAACACGCAGG-CAAACAATCTCAGGAGAGCACGGTCTTGATGGATCCGGAGTGTAAGTTGTACCGAATATATGCAGACTCATTCACGGCT--------GCCTGTTGACATCTGCTGACTTTTGTTTACAGCTACAATGGTACCTCTGATCTCCAACTCGAGCGCCTGAACGTCTACTTCAACGAGGT-------------------------------------------------------------------------- 'Cadophora luteo-olivacea A19' TGAGTCGAACTACTCCACTACCCTTCGAAGT-CCCAGGGGAGGA------CGACCTTTTTGCTGACC-AC----TTATCAACT---ACAGGTTCATCTTCAAACCGGTCAATGCGGTAACCAAATTGGGTATGTTGCTC-TTCAATTCGACCTATATGAAAGCCTTCACTGACTGTGCGATTCTTTTAGTGCTGCCTTTTGGTGAGAAGCCCCAATATCGCGACCTGCCTTATCTGATACACGAACGCGACACAAAGAACCTC----AGTACTGATAAACACGCAGG-CAAACAATCTCAGGAGAGCACGGTCTTGATGGATCCGGAGTGTAAGTTGTACCGAATATATGCAGACTCATTCACGGCT--------GCCTGTTGACATCTGCTGACTTTTGTTTACAGCTACAATGGTACCTCTGATCTCCAACTCGAGCGCCTGAACGTCTACTTCAACGAGGTTCGT---AGCGATAGA--CCAACACATGAACAAAATCCTAATATTCTCATTAGGCCTCCGGAAACAAGTATGTT 'Cadophora luteo-olivacea A41' TGAGTCGAACTACCCCACTACCCTTCGAAGT-CCCAGGGGAGGA------CGACCTTTTTGCTGATC-AC----TTATCATCT---ACAGGTTCATCTTCAAACCGGTCAATGCGGTAACCAAATTGGGTATGTTGCTC-TTCAATTCGACCTATACGAAAGCCTTCACTGACTGTGCGATTCTTTTAGTGCTGCCTTTTGGTGAGAAGCCCCAATATCGCGACCTGCCTTACCTGATACACGAACGCGACACAAAGAACCTC----AGTACTGATAAACACGCAGG-CAAACAATCTCAGGAGAGCACGGTCTTGATGGATCCGGAGTGTAAGTTGTACCGAATATATGCAGACTCATTCACGGCT--------GCCTGTTGACATCTGCTGACTTTTGTTTACAGCTACAATGGTACCTCTGATCTCCAACTCGAGCGCCTGAACGTCTACTTCAACGAGGTTCGT---AGCGATAGA--CCAACACATGAACAAAATCCTAATATTTTCATTAGGCCTCCGGAAACAAGTATGTT 'Cadophora luteo-olivacea A42' TGAGTCGAACTACCCCACTACCCTTCGAAGT-CCCAGGGGAGGA------CGACCTTTTTGCTGACC-AC----TTATCAACT---ACAGGTTCATCTTCAAACCGGTCAATGCGGTAACCAAATTGGGTATGTTGCTC-TTCAATTCGACCTATACGAAAGCCTTCACTGACTGTGCGATTCTTTTAGTGCTGCCTTTTGGTGAGAAGCCCCAATATCGCGACCTGCCTTACCTGATACACGAACGCGACACAAAGAACCTC----AGTACTGATAAACACGCAGG-CAAACAATCTCAGGAGAGCACGGTCTTGATGGATCCGGAGTGTAAGTTGTACCGAATATATGCAGACTCATTCACGGCT--------GCCTGTTGACATCTGCTGACTTTTGTTTACAGCTACAATGGTACCTCTGATCTCCAACTCGAGCGCCTGAACGTCTACTTCAACGAGGTTCGT---AGCGATAGA--ACAACACCTGAACAAAATCCTAATATTTTCATTAGGCCTCCGGAAACAAGTATGTT 'Cadophora luteo-olivacea U5' TGAGTCGAACTACCCCACTACCCTTCGAAGT-TCCAGGGGAGGA------CGACCTTTTTGCTGACC-AC----TTATCAACT---ACTGGTTCATCTTCAAACCGGtCAATGCGGTAACCAAATTGGGTATGTTGCTC-TTCAATTCGACCTATACGAAAGCCTTCACTGACTGTGCGATTCTTTTAGTGCTGCCTTTTGGTGAGAAGCCCCAATATCGCGACCTGCCTTACCTGATACACGAACGCGACACAAAGAACCTC----AGTACTGATAAACACGCAGG-CAAACAATCTCAGGAGAGCACGGTCTTGATGGATCCGGAGTGTAAGTTGTACCGAATATATGCAGACTCATTCACGGCT--------GCCTGTTGACATCTGCTGACTTTTGTTTACAGCTACAATGGTACCTCTGATCTCCAACTCGAGCGCCTGAACGTCTACTTCAACGAGGTTAGT---AGCGATACA--ACATCACATGAACAAAATCCTAATATTCTCATTAGGCCTCCGGAAACAAGTATGTT 'Cadophora luteo-olivacea U8' TGAGTCGAACTACCCCACTACCCTTCGAAGT-TCCAGGGGAGGA------CGACCTTTTTGCTGACC-AC----TTATCAACT---ACTGGTTCATCTTCAAACCGGTCAATGCGGAAACCAAATTGGGTATGTTGCTC-TTCAATTCGACCTATACGAAAGCCTTCACTGACTGTGCGATTCTTTTAGTGCTGCCTTTTGGTGAGAAGCCCCAATATCGCGACCTGCCTTACCTGATACACGAACGCGACACAAAGAACCTC----AGTACTGATAAACACGCAGG-CAAACAATCTCAGGAGAGCACGGTCTTGATGGATCCGGAGTGTAAGTTGTACCGAATATATGCAGACTCATTCACGGCT--------GCCTGTTGACATCTGCTGACTTTTGTTTACAGCTACAATGGTACCTCTGATCTCCAACTCGAGCGCCTGAACGTCTACTTCAACGAGGTTAGT---AGCGATACA--ACATCACATGAACAAAATCCTAATATTCTCATTAGGCCTCCGGAAACAAGTATGTT 'Cadophora luteo-olivacea U17' TGAGTCGAACTACCCCACTACCCTTCGAAGT-CCCAGGGGAGGA------CGACCTTTTTGCTGACC-AC----TTATCAACT---ACAGGTTCATCTTCAAACCGGTCAATGCGGTTACCAAATTGGGTATGTTGCTC-TTCAATTCGACCTATACGAAAGCCTTCACTGACTGTGCGATTCTTTTAGTGCTGCCTTTTGGTGAGAAGCCCCAATATCGCGACCTGCCTTATCTGATACACGAACGCGACACAAAGAACCTC----AGTACTGATAAACACGCAGG-CAAACAATCTCAGGAGAGCACGGTCTTGATGGATCCGGAGTGTAAGTTGTACCGAATATATGCAGACTCATTCACGGCT--------GCCTGTTGACATCTGCTGACTTTTGTTTACAGCTACAATGGTACCTCTGATCTCCAACTCGAGCGCCTGAACGTCTACTTCAACGAGGTTCGT---AGCGATAGA--CCAACACATGAACAAAATCCTAATATTCTCATTAGGCCTCCGGAAACAAGTATGTT 'Cadophora luteo-olivacea U7' TGAGTCGAACTACCCCACTACCCTTCGAAGT-CCCAGGGGAGGA------CGACCTTTTTGCTGACC-AC----TTATCAACT---ACTGGTTCATCTTCAAACCGGTCAATGCGGTAACCAAATTGGGTATGTTGCTC-TTCAATTCGACCTATACGAAAGCCTTCACTGACTGTGCGATTCTTTTAGTGCTGCCTTTTGGTGAGAAGCCCCAATATCGCGACCTGCCTTACCTGATACACGAACGCGACACAAAGAACCTC----AGTACTGATAAACACGCAGG-CAAACAATCTCAGGAGAGCACGGTCTTGATGGATCCGGAGTGTAAGTTGTACCGAATATATGCAGACTCATTCACGGCT--------GCCTGTTGACATCTGCTGACTTTTGTTTACAGCTACAATGGTACCTCTGATCTCCAACTCGAGCGCCTGAACGTCTACTTCAACGAGGTTCGT---AGCGATAGA--CCAACACATGAACAAAATCCTAATATTCTCATTAGGCCTCCGGAAACAAGTATGTT 'Cadophora luteo-olivacea U21' TGAGTCGAACTACCCCACTACCCTTCGAAGT-CCCAGGGGAGGA------CGACCTTTTTGCTGACC-AC----TTATCAACT---ACAGGTTCATCTTCAAACCGGTCAATGCGGTAACCAAATTGGGTATGTTGCTC-TTCAATTCGACCTATACGAAAGCCTTCACTGACTGTGCGATTCTTTTAGTGCTGCCTTTTGGTGAGAAGCCCCAATATCGCGACCTGCCTTACCTGATACACGAACGCGACACAAAGAACCTC----AGTACTGATAAACACGCAGG-CAAACAATCTCAGGAGAGCACGGTCTTGATGGATCCGGAGTGTAAGTTGTACCGAATATATGCAGACTCATTCACGGCT--------GCCTGTTGACATCTGCTGACTTTTGTTTACAGGTACAATGGTACCTCTGATCTCCAACTCGAGCGCCTGAACGTCTACTTCAACGAGGTTCGT---AGCGATAGA--CCAACACATGAACAAAATCCTAATATTCTCATTAGGCCTCCGGAAACAAGTATGTT 'Cadophora luteo-olivacea U22' TGAGTCGAACTACCCCACTACCCTTCGAAGT-CCAAGGGGAGGA------CGACCTTTTTGCTGACC-AC----TTATCAACT---ACAGGTTCATCTTCAAACCGGTCAATGCGGTAACCAAATTGGGTATGTTGCTC-TTCAATTCGACCTATTTGAAAGCCTTCACTGACTGTGCGATTCTTTTAGTGCTGCCTTTTGGTGAGAAGCCCCAATATCGCGACCTGCCTTACCTGATACACGAACGCGACACAAAGAACCTC----AGTACTGATAAACACGCAGG-CAAACAATCTCAGGAGAGCACGGTCTTGATGGATCCGGAGTGTAAGTTGTACCGAATATATGCAGACTCATTCACGGCT--------GCCTGTTGACATCTGCTGACTTTTGTTTACAGCTACAATGGTACCTCTGATCTCCAACTCGAGCGCCTGAACGTCTACTTCAACGAGGTTCGT---AGCGATAGA--CCAACACATGAACAAAATCCTAATATTCTCATTAGGCCTCCGGAAACAAGTATGTT 'Cadophora luteo-olivacea U53' TGAGTCGAACTACCCCACTACCCTTCGAAGT-CCCAGGGGAGGA------CGACCTTTTTGCTGACC-AC----TTATCATCT---ACAGGTTCATCTTCAAACCGGTCAATGCGGTAACCAAATTGGGTATGTTGCTC-TTCAATTCGACCTATACGAAAGCCTTCACTGACTGTGCGATTCTTTTAGTGCTGCCTTTTGGTGAGAAGCCCCAATATCGCGACCTGCCTTACCTGATACACGAACGCGACACAAAGGACCTC----AGTACTGATAAACACGCAGG-CAAACAATCTCAGGAGAGCACGGTCTTGATGGATCCGGAGTGTAAGTTGTACCGAATATATGCAGACTCATTCACGGCT--------GCCTGTTGACATCTGCTGACTTTTGTTTACAGCTACAATGGTACCTCTGATCTCCAACTCGAGCGCCTGAACGTCTACTTCAACGAGGTTCGT---AGCGATAGA--CCAACACATGAACAAAATCCTAATATTCTCATTAGGCCTCCGGAAACAAGTATGTT 'Cadophora luteo-olivacea U56' TGAGTCGAACTACCCCACTACCCTTCGAAGT-CCCAGGGGAGGA------CGACCTTTTTGCTGACC-AC----TTATCATCT---ACAGGTTCATCTTCAAACCGGTCAATGCGGTAACCAAATTGGGTATGTTGCTC-TTCAATTCGACCTATTTGAAAGCCTTCACTGACTGTGCGATTCTTTTAGTGCTGCCTTTTGGTGAGAAGCCCCAATATCGCGACCTGCCTTACCTGATACACGAACGCAACACAAAGGACCTC----AGTACTGATAAACACGCAGG-CAAACAATCTCAGGAGAGCACGGTCTTGATGGATCCGGAGTGTAAGTTGTACCGAATATATGCAGACTCATTCACGGCT--------GCCTGTTGACATCTGCTGACTTTTGTTTACAGCTACAATGGTACCTCTGATCTCCAACTCGAGCGCCTGAACGTCTACTTCAACGAGGTTCGT---AGCGATAGA--CCAACACATGAACAAAATCCTAATATTCTCATTAGGCCTCCGGAAACAAGTATGTT ; END; BEGIN LABELS; CHARGROUPLABEL Character_Matrix; END; BEGIN SETS; CHARSET Character_Matrix = 1 - 538; CHARPARTITION * UNTITLED = Character_Matrix : 1 - 538; CHARPARTITION matrices = Character_Matrix : 1 - 538; END; BEGIN ASSUMPTIONS; TYPESET * UNTITLED = unord: 1 - 538; END; BEGIN CODONS; CODESET * UNTITLED = universal: 1 - 538; END; BEGIN MESQUITECHARMODELS; ProbModelSet * UNTITLED = 'Jukes-Cantor': 1 - 538; END; BEGIN TREES; Title BT; ID 015ea3930b0670; LINK Taxa = Taxa; TRANSLATE [0] 1 Cadophora_finlandica, [1] 2 Cadophora_orientamericana_CTC1, [2] 3 Cadophora_orientamericana_CTC2, [3] 4 Cadophora_orientamericana_CTC4, [4] 5 Cadophora_orientamericana_CTC5, [5] 6 Cadophora_orientamericana_MAC2, [6] 7 Cadophora_orientamericana_MDC1, [7] 8 Cadophora_orientamericana_NHC1, [8] 9 Cadophora_orientamericana_NHC2, [9] 10 Cadophora_orientamericana_NHC3, [10] 11 Cadophora_orientamericana_NYC3, [11] 12 Cadophora_orientamericana_NYC6, [12] 13 Cadophora_orientamericana_NYC9, [13] 14 Cadophora_orientamericana_NYC11, [14] 15 Cadophora_orientamericana_NYC12, [15] 16 Cadophora_orientamericana_VAC1, [16] 17 Cadophora_orientamericana_VTC1, [17] 18 Cadophora_orientamericana_OHC1, [18] 19 Cadophora_spadicis_RIC1, [19] 20 Cadophora_spadicis_111743BT, [20] 21 Cadophora_spadicis_RIC3, [21] 22 Cadophora_spadicis_QCC1, [22] 23 Cadophora_fastigiata_A168, [23] 24 Cadophora_melinii_A164, [24] 25 Cadophora_melinii_U11, [25] 26 Cadophora_melinii_ONC1, [26] 27 'Cadophora novi-eboraci 101359BT', [27] 28 'Cadophora novi-eboraci NYC2', [28] 29 'Cadophora novi-eboraci NYC1', [29] 30 'Cadophora novi-eboraci NYC13', [30] 31 'Cadophora novi-eboraci NYC14', [31] 32 Cadophora_malorum_A167, [32] 33 'Cadophora luteo-olivacea A175', [33] 34 'Cadophora luteo-olivacea A19', [34] 35 'Cadophora luteo-olivacea A41', [35] 36 'Cadophora luteo-olivacea A42', [36] 37 'Cadophora luteo-olivacea U5', [37] 38 'Cadophora luteo-olivacea U8', [38] 39 'Cadophora luteo-olivacea U17', [39] 40 'Cadophora luteo-olivacea U7', [40] 41 'Cadophora luteo-olivacea U21', [41] 42 'Cadophora luteo-olivacea U22', [42] 43 'Cadophora luteo-olivacea U53', [43] 44 'Cadophora luteo-olivacea U56'; TREE 'PAUP_1' = (1:0.15652,((32:0.026118,(33:0.017148,((37:0.0,38:0.002007):0.012425,(36:0.00231,(35:0.004087,(43:0.004017,((42:0.002016,44:0.006047):0.004019,((34:0.004015,39:0.002016):0.002,(40:0.002004,41:0.002006):0.0):0.0):0.0):0.001938):0.001772):0.0):0.0):0.029069):0.62268,((27:0.017356,((28:0.0,31:0.0):0.0,(29:0.003925,30:0.010501):0.025407):0.04052):0.143163,(((24:0.0,(25:0.0,26:0.014636):0.004096):0.02288,(23:0.017363,(20:0.006345,(22:0.008427,(19:0.0,21:0.0):0.0):0.002091):0.017435):0.020778):0.00515,(((8:0.0,18:0.0):0.002059,(4:0.002054,(7:0.002058,9:0.0):0.0):0.0):0.002059,((2:0.0,(15:0.0,((6:0.0,16:0.0):0.0,(11:0.0,12:0.0):0.0):0.0):0.0):0.002054,((13:0.0,17:0.0):0.0,((3:0.0,5:0.0):0.0,(10:0.0,14:0.0):0.002053):0.002057):0.002053):0.0):0.063177):0.033527):0.0000448034):0.15652)[% ] [% ] [% setBetweenBits = selected ]; END; Begin MESQUITE; MESQUITESCRIPTVERSION 2; TITLE AUTO; tell ProjectCoordinator; timeSaved 1505982911432; getEmployee #mesquite.minimal.ManageTaxa.ManageTaxa; tell It; setID 0 7092940046356218091; endTell; getEmployee #mesquite.charMatrices.ManageCharacters.ManageCharacters; tell It; setID 0 2650778596746289295; mqVersion 330; checksumv 0 3 4161766054 null getNumChars 538 numChars 538 getNumTaxa 44 numTaxa 44 short true bits 1152921504606846991 states 15 sumSquaresStatesOnly 478318.0 sumSquares 478318.0 longCompressibleToShort false usingShortMatrix true NumFiles 1 NumMatrices 1 errorReportedDuringRun; mqVersion; endTell; getWindow; tell It; suppress; setResourcesState true false 180; setPopoutState 300; setExplanationSize 0; setAnnotationSize 0; setFontIncAnnot 0; setFontIncExp 0; setSize 957 576; setLocation 8 23; setFont SanSerif; setFontSize 10; getToolPalette; tell It; endTell; setActive; desuppress; endTell; getEmployee #mesquite.charMatrices.BasicDataWindowCoord.BasicDataWindowCoord; tell It; showDataWindow #2650778596746289295 #mesquite.charMatrices.BasicDataWindowMaker.BasicDataWindowMaker; tell It; getWindow; tell It; setExplanationSize 30; setAnnotationSize 20; setFontIncAnnot 0; setFontIncExp 0; setSize 0 -72; setLocation 8 23; setFont SanSerif; setFontSize 10; getToolPalette; tell It; endTell; setTool mesquite.charMatrices.BasicDataWindowMaker.BasicDataWindow.arrow; colorCells #mesquite.charMatrices.ColorByState.ColorByState; tell It; setStateLimit 9; toggleUniformMaximum on; endTell; colorRowNames #mesquite.charMatrices.TaxonGroupColor.TaxonGroupColor; colorColumnNames #mesquite.charMatrices.CharGroupColor.CharGroupColor; colorText #mesquite.charMatrices.NoColor.NoColor; setBackground White; toggleShowNames on; toggleShowTaxonNames on; toggleTight off; toggleThinRows off; toggleShowChanges off; toggleSeparateLines off; toggleShowStates on; toggleAutoWCharNames off; toggleAutoTaxonNames off; toggleShowDefaultCharNames off; toggleConstrainCW on; toggleBirdsEye off; toggleShowPaleGrid off; toggleShowPaleCellColors off; toggleShowPaleExcluded off; togglePaleInapplicable on; toggleShowBoldCellText off; toggleAllowAutosize off; toggleColorsPanel off; toggleLinkedScrolling on; toggleScrollLinkedTables off; endTell; getWindow; tell It; forceAutosize; endTell; hideWindow; getEmployee #mesquite.charMatrices.AlterData.AlterData; tell It; toggleBySubmenus off; endTell; getEmployee #mesquite.charMatrices.ColorCells.ColorCells; tell It; setColor Red; removeColor off; endTell; getEmployee #mesquite.categ.StateNamesStrip.StateNamesStrip; tell It; showStrip off; endTell; getEmployee #mesquite.charMatrices.AnnotPanel.AnnotPanel; tell It; togglePanel off; endTell; getEmployee #mesquite.charMatrices.CharReferenceStrip.CharReferenceStrip; tell It; showStrip off; endTell; getEmployee #mesquite.charMatrices.QuickKeySelector.QuickKeySelector; tell It; autotabOff; endTell; getEmployee #mesquite.charMatrices.SelSummaryStrip.SelSummaryStrip; tell It; showStrip off; endTell; getEmployee #mesquite.align.AlignToDropped.AlignToDropped; tell It; gapCosts 16 6 1 1; subCosts 10 5 10 10 10 5 5 10 10 10 5 10; endTell; getEmployee #mesquite.molec.ColorByAA.ColorByAA; tell It; emphasizeDegeneracy off; endTell; getEmployee #mesquite.molec.SequenceInfoEditor.SequenceInfoEditor; tell It; panelOpen false; endTell; endTell; endTell; endTell; end;