#NEXUS [written Mon Sep 01 16:18:42 CEST 2014 by Mesquite version 3.0 (build 644) at Cobuss-MacBook-Air.local/192.168.253.87] BEGIN TAXA; TITLE Taxa; DIMENSIONS NTAX=48; TAXLABELS Penicillium_austricola_CBS135904 Penicillium_austricola_CBS135899 Penicillium_austricola_CBS135900T Penicillium_austricola_CBS135901 Penicillium_austricola_CBS135902 Penicillium_austricola_CBS135903 Penicillium_austricola_CBS136253 Penicillium_lagena_CBS129212 Penicillium_lagena_CBS129389 Penicillium_lagena_CBS129620 Penicillium_lagena_CBS185.65T Penicillium_riverlandense_CBS135894 Penicillium_riverlandense_CBS135895 Penicillium_riverlandense_CBS135896T Penicillium_riverlandense_CBS135883 Penicillium_riverlandense_CBS135884 Penicillium_riverlandense_CBS135885 Penicillium_riverlandense_CBS135886 Penicillium_riverlandense_DTO183E8 Penicillium_riverlandense_CBS135887 Penicillium_riverlandense_CBS135888 Penicillium_riverlandense_CBS135889 Penicillium_riverlandense_CBS135890 Penicillium_riverlandense_CBS135891 Penicillium_riverlandense_CBS135892 Penicillium_riverlandense_CBS135893 Penicillium_porphyreum_CBS132154 Penicillium_porphyreum_CBS382.64T Penicillium_variratense_CBS337.97T Penicillium_aeris_CBS135897 Penicillium_tubakianum_CBS287.66T Penicillium_catalonicum_CBS110532T Penicillium_cantabricum_CBS120415T Penicillium_wisconsinense_CBS128279T Penicillium_wisconsinense_CBS128412 Penicillium_wisconsinense_CBS128421 Penicillium_marthaechristenseniae_CBS129213T Penicillium_williamettense_CBS129774T Penicillium_oregonense_CBS129775T Penicillium_wollemicola_CBS137177T Penicillium_cryptum_CBS271.89T Penicillium_lassenii_CBS277.70T Penicillium_ovatum_CBS136664T Penicillium_laeve_CBS136665T Penicillium_toxicarium_NRRL6172 Penicillium_restrictum_CBS367.48T Penicillium_corylophilum_CBS_330.79 Penicillium_dimorphosporum_CBS456.70T ; END; BEGIN CHARACTERS; TITLE 'Torulomyces_BenA'; DIMENSIONS NCHAR=368; FORMAT DATATYPE = DNA GAP = - MISSING = ?; MATRIX Penicillium_austricola_CBS135904 ATCGACATGGGACTGACAGGACTACAGGCAGAACATTTCTGGCGAGCACGGCCTCGATGGCGATGGCCAGTGAGTAC--AATGTGATGG-CTTG-------GGTGC-GGGATA-------CACGTCTGATGTTTTG--ACAGCTACAATGGCGCCTCCGACCTGCAGCTGGAGCGCATGAACGTCTACTTCAATCATGTGGGTGGCCTCCCCCC--T------GTCTC--AATTGAT---TCAATCTAAT-ATCTTCC-------------CAGGCCTCCGGTGACCGCTACGTTCCCCGTGCCGTCCTGGTCGATCTGGAGCCTGGCACCATGGATGCCGTCCGTGCCGGCCCCTTCGGCAAGCTTT Penicillium_austricola_CBS135899 ATCGACATGGGACTGACAGGACTACAGGCAGAACATTTCTGGCGAGCACGGCCTCGATGGCGATGGCCAGTGAGTAC--AATGTGATGG-CTTG-------GGTGC-GGGATA-------CACGTCTGATGTTTTG--ACAGCTACAATGGCGCCTCCGACCTGCAGCTGGAGCGCATGAACGTCTACTTCAATCATGTGGGTGGCCTCCCCCC--T------GTCTC--AATTGAT---TCAATCTAAT-ATCTTCC-------------CAGGCCTCCGGTGACCGCTACGTTCCCCGTGCCGTCCTGGTCGATCTGGAGCCTGGCACCATGGATGCCGTCCGTGCCGGCCCCTTCGGCAAGCTTT Penicillium_austricola_CBS135900T ATCGACATGGGACTGACAGGACTACAGGCAGAACATTTCTGGCGAGCACGGCCTCGATGGCGATGGCCAGTGAGTAC--AATGTGATGG-CTTG-------GGTGC-GGGATA-------CACGTCTGATGTTTTG--ACAGCTACAATGGCGCCTCCGACCTGCAGCTGGAGCGCATGAACGTCTACTTCAACCATGTGGGTGGCCTCCCCCC--T------GTCTC--AATTGAT---TCAATCTAAT-ATCTTCC-------------CAGGCCTCCGGTGACCGCTACGTTCCCCGTGCCGTCCTGGTCGATCTGGAGCCTGGCACCATGGATGCCGTCCGTGCCGGCCCCTTCGGCAAGCTTT Penicillium_austricola_CBS135901 ATCGACATGGGACTGACAGGACTACAGGCAGAACATTTCTGGCGAGCACGGCCTCGATGGCGATGGCCAGTGAGTAC--AATGTGATGG-CTTG-------GGTGC-GGGATA-------CACGTCTGATGTTTTG--ACAGCTACAATGGCGCCTCCGACCTGCAGCTGGAGCGCATGAACGTCTACTTCAACCATGTGGGTGGCCTCCCCCC--T------GTCTC--AATTGAT---TCAATCTAAT-ATCTTCC-------------CAGGCCTCCGGTGACCGCTACGTTCCCCGTGCCGTCCTGGTCGATCTGGAGCCTGGCACCATGGATGCCGTCCGTGCCGGCCCCTTCGGCAAGCTTT Penicillium_austricola_CBS135902 ATCGACATGGGACTGACAGGACTACAGGCAGAACATTTCTGGCGAGCACGGCCTCGATGGCGATGGCCAGTGAGTAC--AATGTGATGG-CTTG-------GGTGC-GGGATA-------CACGTCTGATGTTTTG--ACAGCTACAATGGCGCCTCCGACCTGCAGCTGGAGCGCATGAACGTCTACTTCAACCATGTGGGTGGCCTCCCCCC--T------GTCTC--AATTGAT---TCAATCTAAT-ATCTTCC-------------CAGGCCTCCGGTGACCGCTACGTTCCCCGTGCCGTCCTGGTCGATCTGGAGCCTGGCACCATGGATGCCGTCCGTGCCGGCCCCTTCGGCAAGCTTT Penicillium_austricola_CBS135903 ATCGACATGGGACTGACAGGACTACAGGCAGAACATTTCTGGCGAGCACGGCCTCGATGGCGATGGCCAGTGAGTAC--AATGTGATGG-CTTG-------GGTGC-GGGATA-------CACGTCTGATGTTTTG--ACAGCTACAATGGCGCCTCCGACCTGCAGCTGGAGCGCATGAACGTCTACTTCAACCATGTGGGTGGCCTCCCCCC--T------GTCTC--AATTGAT---ACAATCTAAT-ATCATCC-------------CAGGCCTCCGGTGACCGCTACGTTCCCCGTGCCGTCCTGGTCGATCTGGAGCCTGGCACCATGGATGCCGTCCGTGCCGGCCCCTTCGGCAAGCTTT Penicillium_austricola_CBS136253 ATCGACATGGGACTGACAGGACTACAGGCAGAACATTTCTGGCGAGCACGGCCTCGATGGCGATGGCCAGTGAGTAC--AATGTGATGG-CTTG-------GGTGC-GGGATA-------CACGTCTGATGTTTTG--ACAGCTACAATGGCGCCTCCGACCTGCAGCTGGAGCGCATGAACGTCTACTTCAACCATGTGGGTGGCCTCCCCCC--T------GTCTC--AATTGAT---TCAATCTAAT-ATCTTCC-------------CAGGCCTCCGGTGACCGCTACGTTCCCCGTGCCGTCCTGGTCGATCTGGAGCCTGGCACCATGGATGCCGTCCGTGCCGGCCCCTTCGGCAAGCTTT Penicillium_lagena_CBS129212 ATCGACAAGGGACTGACAGGACTACAGGCAGAACATTTCTGGCGAGCACGGCCTCGATGGCGATGGCCAGTGAGTAC--AATGTGATGG-TTTG-------GGTAT-GGGACA------CAACATCTGATGTTTTG--ACAGCTACAATGGTGCCTCCGACCTGCAGCTGGAGCGCATGAACGTCTACTTCAACCATGTGGGTGGCCTTCCCCC--CA-----GTCTC--ACTTGAT---ACAATCTAAT-ATCATTC-------------CAGGCCTCCGGTGACCGCTACGTTCCCCGTGCCGTCCTGGTCGATCTGGAGCCTGGCACCATGGATGCCGTCCGTGCCGGCCCCTTCGGCAAGCTTT Penicillium_lagena_CBS129389 ATCGACAAGGGACTGACAGGACTACAGGCAGAACATTTCTGGCGAGCACGGCCTCGATGGCGATGGCCAGTGAGTAC--AATGTGATGG-TTTG-------GGTAT-GGGACA------CAACATCTGATGTTTTG--ACAGCTACAATGGTGCCTCCGACCTGCAGCTGGAGCGCATGAACGTCTACTTCAACCATGTGGGTGGCCTTCCCCC--CA-----GTCTC--ACTTGAT---ACAATCTAAT-ATCATTC-------------CAGGCCTCCGGTGACCGCTACGTTCCCCGTGCCGTCCTGGTCGATCTGGAGCCTGGCACCATGGATGCCGTCCGTGCCGGCCCCTTCGGCAAGCTTT Penicillium_lagena_CBS129620 ATCGACAAGGGACTGACAGGACTACAGGCAGAACATTTCTGGCGAGCACGGCCTCGATGGCGATGGCCAGTGAGTAC--AATGTGATGG-TTTG-------GGTAT-GGGACA------CAACATCTGATGTTTTG--ACAGCTACAATGGTGCCTCCGACCTGCAGCTGGAGCGCATGAACGTCTACTTCAACCATGTGGGTGGCCTTCCCCC--CA-----GTCTC--ACTTGAT---ACAATCTAAT-ATCATTC-------------CAGGCCTCCGGTGACCGCTACGTTCCCCGTGCCGTCCTGGTCGATCTGGAGCCTGGCACCATGGATGCCGTCCGTGCCGGCCCCTTCGGCAAGCTTT Penicillium_lagena_CBS185.65T ATCGACAAGGGACTGACAGGACTACAGGCAGAACATTTCTGGCGAGCACGGCCTCGATGGCGATGGCCAGTGAGTAC--AATGTGATGG-TTTG-------GGTAT-GGGACA------CAACATCTGATGTTTTG--ACAGCTACAATGGTGCCTCCGACCTGCAGCTGGAGCGCATGAACGTCTACTTCAACCATGTGGGTGGCCTTCCCCC--CA-----GTCTC--ACTTGAT---ACAATCTAAT-ATCATTC-------------CAGGCCTCCGGTGACCGCTACGTTCCCCGTGCCGTCCTGGTCGATCTGGAGCCTGGCACCATGGATGCCGTCCGTGCCGGCCCCTTCGGCAAGCTTT Penicillium_riverlandense_CBS135894 ATCGACAAGGGACTGACAGTACTACAGGCAGAACATTTCTGGCGAGCACGGCCTCGATGGCGATGGCCAGTGAGTAC--AATGTGATGG-CTTG-------GATGC-CGGATA-------CACGTCTGATGTTTTG--ACAGCTACAATGGCGCCTCCGACCTGCAGCTGGAGCGCATGAACGTTTACTTCAACCATGTGGGTGGCCTCCCCCT--T------GTCTC--AATTGAT---ACAATCTAAT-ACCATTC-------------CAGGCCTCCGGTGACCGCTACGTTCCCCGTGCCGTCCTGGTCGATCTTGAGCCTGGCACCATGGATGCCGTCCGTGCCGGCCCCTTCGGCAAGCTTT Penicillium_riverlandense_CBS135895 ATCGACAAGGGACTGACAGTACTACAGGCAGAACATTTCTGGCGAGCACGGCCTCGATGGCGATGGCCAGTGAGTAC--AATGTGATGG-CTTG-------GATGC-GGGATA-------CACGTCTGATGTTTTG--ACAGCTACAATGGCGCCTCCGACCTGCAGCTGGAGCGCATGAACGTTTACTTCAACCATGTGGGTGGCCTCCCCCT--T------GTCTC--AATTGAT---ACAATCTAAT-ACCATTC-------------CAGGCCTCCGGTGACCGCTACGTTCCCCGTGCCGTCCTGGTCGATCTTGAGCCTGGCACCATGGATGCCGTCCGTGCCGGCCCCTTCGGCAAGCTTT Penicillium_riverlandense_CBS135896T ATCGACAAGGGACTGACAGTACTACAGGCAGAACATTTCTGGCGAGCACGGCCTCGATGGCGATGGCCAGTGAGTAC--AATGTGATGG-CTTG-------GATGC-GGGATA-------CACGTCTGATGTTTTG--ACAGCTACAATGGCGCCTCCGACCTGCAGCTGGAGCGCATGAACGTTTACTTCAACCATGTGGGTGGCCTCCCCCT--T------GTCTC--AATTGAT---ACAATCTAAT-ACCATTC-------------CAGGCCTCCGGTGACCGCTACGTTCCCCGTGCCGTCCTGGTCGATCTTGAGCCTGGCACCATGGATGCCGTCCGTGCCGGCCCCTTCGGCAAGCTTT Penicillium_riverlandense_CBS135883 ATCGACAAGGGACTGACAGTACTACAGGCAGAACATTTCTGGCGAGCACGGCCTCGATGGCGATGGCCAGTGAGTAC--AATGTGATGG-CTTG-------GATGC-GGGATA-------CACGTCTGATGTTTTG--ACAGCTACAATGGCGCCTCCGACCTGCAGCTGGAGCGCATGAACGTTTACTTCAACCATGTGGGTGGCCTCCCCCT--T------GTCTC--AATTGAT---ACAATCTAAT-ACCATTC-------------CAGGCCTCCGGTGACCGCTACGTTCCCCGTGCCGTCCTGGTCGATCTTGAGCCTGGCACCATGGATGCCGTCCGTGCCGGCCCCTTCGGCAAGCTTT Penicillium_riverlandense_CBS135884 ATCGACAAGGGACTGACAGTACTACAGGCAGAACATTTCTGGCGAGCACGGCCTCGATGGCGATGGCCAGTGAGTAC--AATGTGATGG-CTTG-------GATGC-GGGATA-------CACGTCTGATGTTTTG--ACAGCTACAATGGCGCCTCCGACCTGCAGCTGGAGCGCATGAACGTTTACTTCAACCATGTGGGTGGCCTCCCCCT--T------GTCTC--AATTGAT---ACAATCTAAT-ACCATTC-------------CAGGCCTCCGGTGACCGCTACGTTCCCCGTGCCGTCCTGGTCGATCTTGAGCCTGGCACCATGGATGCCGTCCGTGCCGGCCCCTTCGGCAAGCTTT Penicillium_riverlandense_CBS135885 ATCGACAAGGGACTGACAGGACTACAGGCAGAACATTTCTGGCGAGCACGGCCTCGATGGCGATGGCCAGTGAGTAC--AATGTGATGG-CTTG-------GATGC-GGGATA-------CACGTCTGATGTTTTG--ACAGCTACAATGGCGCCTCCGACCTGCAGCTGGAGCGCATGAACGTCTACTTCAACCATGTGGGTGGCCTCCCCCT--T------GTCTC--AATTGAT---ACAATCTAAT-ACCATTC-------------CAGGCCTCCGGTGACCGCTACGTTCCCCGTGCCGTCCTGGTCGATCTGGAGCCTGGCACCATGGATGCCGTCCGTGCCGGCCCCTTCGGCAAGCTTT Penicillium_riverlandense_CBS135886 ATCGACAAGGGACTGACAGTACTACAGGCAGAACATTTCTGGCGAGCACGGCCTCGATGGCGATGGCCAGTGAGTAC--AATGTGATGG-CTTG-------GATGC-CGGATA-------CACGTCTGATGTTTTG--ACAGCTACAATGGCGCCTCCGACCTGCAGCTGGAGCGCATGAACGTTTACTTCAACCATGTGGGTGGCCTCCCCCT--T------GTCTC--AATTGAT---ACAATCTAAT-ACCATTC-------------CAGGCCTCCGGTGACCGCTACGTTCCCCGTGCCGTCCTGGTCGATCTTGAGCCTGGCACCATGGATGCCGTCCGTGCCGGCCCCTTCGGCAAGCTTT Penicillium_riverlandense_DTO183E8 ATCGACAAGGGACTGACAGTACTACAGGCAGAACATTTCTGGCGAGCACGGCCTCGATGGCGATGGCCAGTGAGTAC--AATGTGATGG-CTTG-------GATGC-GGGATA-------CACGTCTGATGTTTTG--ACAGCTACAATGGCGCCTCCGACCTGCAGCTGGAGCGCATGAACGTTTACTTCAACCATGTGGGTGGCCTCCCCCT--T------GTCTC--AATTGAT---ACAATCTAAT-ACCATTC-------------CAGGCCTCCGGTGACCGCTACGTTCCCCGTGCCGTCCTGGTCGATCTTGAGCCTGGCACCATGGATGCCGTCCGTGCCGGCCCCTTCGGCAAGCTTT Penicillium_riverlandense_CBS135887 ATCGACAAGGGACTGACAGGACTACAGGCAGAACATTTCTGGCGAGCACGGCCTCGATGGCGATGGCCAGTGAGTAC--AATGTGATGG-CTTG-------GGTGC-GGGATA-------CACGTCTGATGTTTTG--ACAGCTACAATGGCGCCTCCGACCTGCAGCTGGAGCGCATGAACGTCTACTTCAACCATGTGGGTGGCCTCCTCCT--T------GTCTC--AATTGAT---ACAATCTAAT-ACCATTC-------------CAGGCCTCCGGTGACCGCTACGTTCCCCGTGCCGTCCTGGTCGATCTTGAGCCTGGCACCATGGATGCCGTCCGTGCCGGCCCCTTCGGCAAGCTTT Penicillium_riverlandense_CBS135888 ATCGACAAGGGACTGACAGGACTACAGGCAGAACATTTCTGGCGAGCACGGCCTCGATGGCGATGGCCAGTGAGTAC--AATGTGATGG-CTTG-------GATGC-GGGATA-------CACGTCTGATGTTTTG--ACAGCTACAATGGCGCCTCCGACCTGCAGCTGGAGCGCATGAACGTCTACTTCAACCATGTGGGTGGCCTCCCCCT--T------GTCTC--AATTGAT---ACAATCTAAT-ACCATTC-------------CAGGCCTCCGGTGACCGCTACGTTCCCCGTGCCGTCCTGGTCGATCTGGAGCCTGGCACCATGGATGCCGTCCGTGCCGGCCCTTTCGGCAAGCTTT Penicillium_riverlandense_CBS135889 ATCGACAAAGGACTGACAGAACTACAGGCAGAACATTTCTGGCGAGCACGGCCTCGATGGCGATGGCCAGTGAGTAC--AATGTGATGG-CTTG-------GATGC-GGGATA-------CACGTCTGATGTTTTG--ACAGCTACAATGGCGCCTCCGACCTGCAGCTGGAGCGCATGAACGTCTACTTCAACCATGTGGGTGGTCTCCCCCT--T------GTCTC--AATTGAT---ACAATCTAAT-ACCATTC-------------CAGGCCTCCGGTGACCGCTACGTTCCCCGTGCCGTCCTGGTCGATCTGGAGCCTGGCACCATGGATGCCGTCCGTGCCGGCCCTTTCGGCAAGCTTT Penicillium_riverlandense_CBS135890 ATCGACAAGGGACTGACAGGACTACAGGCAGAACATTTCTGGCGAGCACGGCCTCGATGGCGATGGCCAGTGAGTAC--AATGTGATGG-CTTG-------GATGC-GGGATA-------CACGTCTGATGTTTTG--ACAGCTACAATGGCGCCTCCGACCTGCAGCTGGAGCGCATGAACGTCTACTTCAACCATGTGGGTGGCCTCCCCCT--T------GTCTC--AATTGAT---ACAATCTAAT-ACCATTC-------------CAGGCCTCCGGTGACCGCTACGTTCCCCGTGCCGTCCTGGTCGATCTGGAGCCTGGCACCATGGATGCCGTCCGTGCCGGCCCCTTCGGCAAGCTTT Penicillium_riverlandense_CBS135891 ATCGACAAAGGACTGACAGAACTACAGGCAGAACATTTCTGGCGAGCACGGCCTCGATGGCGATGGCCAGTGAGTAC--AATGTGATGG-CTTG-------GATGC-GGGATA-------CACGTCTGATGTTTTG--ACAGCTACAATGGCGCCTCCGACCTGCAGCTGGAGCGCATGAACGTCTACTTCAACCATGTGGGTGGTCTCCCCCT--T------GTCTC--AATTGAT---ACAATCTAAT-ACCATTC-------------CAGGCCTCCGGTGACCGCTACGTTCCCCGTGCCGTCCTGGTCGATCTGGAGCCTGGCACCATGGATGCCGTCCGTGCCGGCCCTTTCGGCAAGCTTT Penicillium_riverlandense_CBS135892 ATCGACAAGGGACTGACAGGACTACAGGCAGAACATTTCTGGCGAGCACGGCCTCGATGGCGATGGCCAGTGAGTAC--AATGTGATGG-CTTG-------GATGC-GGGATA-------CACGTCTGATGTTTTG--ACAGCTACAATGGCGCCTCCGACCTGCAGCTGGAGCGCATGAACGTCTACTTCAACCATGTGGGTGGCCTCCCCCT--T------GTCTC--AATTGAT---ACAATCTAAT-ACCATTC-------------CAGGCCTCCGGTGACCGCTACGTTCCCCGTGCCGTCCTGGTCGATCTGGAGCCTGGCACCATGGATGCCGTCCGTGCCGGCCCCTTCGGCAAGCTTT Penicillium_riverlandense_CBS135893 ATCGACAAGGGACTGACAGGACTACAGGCAGAACATTTCTGGCGAGCACGGCCTCGATGGCGATGGCCAGTGAGTAC--AATGTGATGG-CTTG-------GATGC-GGGATA-------CACGTCTGATGTTTTG--ACAGCTACAATGGCGCCTCCGACCTGCAGCTGGAGCGCATGAACGTCTACTTCAACCATGTGGGTGGCCTCCCCCT--T------GTCTC--AATTGAT---ACAATCTAAT-ACCATTC-------------CAGGCCTCCGGTGACCGCTACGTTCCCCGTGCCGTCCTGGTCGATCTGGAGCCTGGCACCATGGATGCCGTCCGTGCCGGCCCCTTCGGCAAGCTTT Penicillium_porphyreum_CBS132154 ATCGACAAGGGACTGACAGGACTACAGGCAGAACATTTCTGGCGAGCACGGCCTCGATGGTGATGGCCAGTGAGTAC--AATGTGATGGTTTTG-------GGTTT-GGGACA------CGACGTCTGATGTTTTG--ACAGCTACAATGGTGCCTCCGACCTGCAGCTGGAGCGCATGAACGTCTACTTCAACCATGTGGGTGGACTTCCCCC--CA-----GTCTC--ACTTGAT---ACAATCTAAT-TTCATTC-------------CAGGCCTCCGGTGACCGCTACGTTCCCCGTGCCGTCCTGGTCGATCTGGAGCCTGGCACCATGGATGCCGTCCGTGCCGGCCCCTTCGGCAAGCTTT Penicillium_porphyreum_CBS382.64T ATCGACAAGGGACTGACAGGACTACAGGCAGAACATTTCTGGCGAGCACGGCCTCGATGGTGATGGCCAGTGAGTAC--AATGTGATGGTTTTG-------GGTTT-GGGACA------CGACGTCTGATGTTTTG--ACAGCTACAATGGTGCCTCCGACCTGCAGCTGGAGCGCATGAACGTCTACTTCAACCATGTGGGTGGACTTCCCCCC-A------GTCTC--ACTTGAT---ACAATCTAAT-TTCATTC-------------CAGGCCTCCGGTGACCGCTACGTTCCCCGTGCCGTCCTGGTCGATCTGGAGCCTGGCACCATGGATGCCGTCCGTGCCGGCCCCTTCGGCAAGCTTT Penicillium_variratense_CBS337.97T ATCGACAAGGGACTGACAGGACTACAGGCAGAACATTTCTGGCGAGCACGGCCTCGATGGCGATGGCCAGTAAGTCCCAACGGGAATGG-TCTG-------GGTGC-GGGACA---------CGTCTAATGTTTTG--ACAGCTACAATGGCGCCTCCGACCTGCAGCTGGAGCGCATGAACGTCTACTTCAACCATGTGCGTGGCCTGCCTTTCCC------CAATCCCCCTTGATAGCCCAATCTAAT-ACCTCT--------------CAGGCCTCCGGTGACCGCTACGTTCCCCGTGCCGTCCTGGTCGATCTGGAGCCTGGCACCATGGATGCCGTCCGTGCCGGCCCCTTCGGCAAGCTCT Penicillium_aeris_CBS135897 ATCGACAAGGGACTGACAGGACTACAGGCAGAACATTTCTGGCGAGCACGGCCTCGATGGCGATGGCCAGTGAGTAC--AAAGTGATGG-ATTG-------GGTGTGGGGATA-------CACGTCTGATGTTTTG--ACAGCTACAATGGCGCCTCCGACCTGCAGCTGGAGCGCATGAACGTCTACTTCAACCATGTGGGTGGCCTTCCCCC--T------GTCTC--AATTGAT---ATAATCTAAT-ATCATCC-------------TAGGCCTCCGGAGACCGCTACGTTCCCCGTGCCGTCCTGGTCGATCTGGAGCCTGGCACCATGGATGCCGTCCGTGCCGGCCCCTTCGGCAAGCTTT Penicillium_tubakianum_CBS287.66T ATCGACAAGGGACTGACAGGACTACAGGCAGAACATTTCTGGCGAGCACGGCCTTGATGGCGATGGCCAGTGAGTAC--AACGTGATGA-ATTG-------GGTGC-GGGACA-------CACGTCTGATGTTTTG--ACAGCTACACTGGCTCCTCCGATCAGCAGCTGGAGCGCATGAACGTGTACTTCAACCATGTGGGTGGCCCTCCCCC--T------ATCTC--AATTGGT---ACAATCTAAT-ATCATCC-------------CAGGCCTCCGGTGACCGCTATGTTCCCCGTGCCGTCCTGGTCGATCTGGAGCCTGGCACCATGGATGCCGTCCGTGCCGGCCCCTTCGGCAAGCTTT Penicillium_catalonicum_CBS110532T ATCGACAAGGGACTGACAGGACTACAGGCAGAACATTTCTGGCGAGCACGGCCTCGATGGTGATGGCCAGTGAGTAC--AACATGATGG-ATTG-------GGTGC-GGGACA---------CGTCTGATATTTTG--ACAGCTACCAGGGCGCCTCCGATCTGCAGCGGGAGCGCATGAACGTCTACTTCAACGAGGTGGGTGGCCTTCCCCCCCCCCCCCGGTTTC--ACCTGAT---ACAATCTAAT-ATCATCC-------------CAGGCCTCCAGTGATCGCTACGTTCCCCGTGCCGTCCTGGTCGATCTGGAGCCTGGCACCATGGATGCCGTCCGTGCTGGCCCCTTCGGCAAGCTTT Penicillium_cantabricum_CBS120415T ATCGACAAGGGACTGACAGGACTACAGGCAGAACATTTCTGGCGAGCACGGCCTCGATGGTGATGGCCAGTGAGTAC--AAACTGATGG-ATTG-------GGTGC-CGGATA-------CACGTCTAATGTTTTG--ACAGCTACAATGGCGCCTCCGACCTGCAGCTGGAGCGCATGAACGTCTACTTCAACCATGTGGGTGGCCTTCCCCC--T------GTCTC--AATTGAT---ACAATCTAAT-ATCATCC-------------TAGGCCTCCGGAGACCGCTACGTTCCCCGTGCCGTCCTGGTCGATCTGGAGCCTGGCACCATGGATGCCGTCCGTGCCGGCCCCTTCGGCAAGCTTT Penicillium_wisconsinense_CBS128279T ATCGACAAGGGACTGACAGGACTACAGGCAGAACATTTCTGGCGAGCACGGCCTCGATGGCGATGGCCAGTGAGTAC--AATGTGATGG-CTTG-------GGTGC-GGGACA------CAACATCTGATGTTTTG--ACAGCTACAATGGCGCCTCCGACCTGCAGCTGGAGCGCATGAACGTCTACTTCAACCATGTGGGTG-CCTTCCCCC--G------GTCTC--ATTTGAT---ACAATCTAAT-ATCATTC-------------CAGGCCTCCGGTGACCGCTACGTTCCCCGTGCCGTCCTGGTCGATCTGGAGCCTGGCACCATGGATGCCGTCCGTGCCGGCCCCTTCGGCAAGCTTT Penicillium_wisconsinense_CBS128412 ATCGACAAGGGACTGACAGGACTACAGGCAGAACATTTCTGGCGAGCACGGCCTCGATGGCGATGGCCAGTGAGTAC--AATGTGATGG-CTTG-------GGTGC-GGGACA------CAACATCTGATGTTTTG--ACAGCTACAATGGCGCCTCCGACCTGCAGCTGGAGCGCATGAACGTCTACTTCAACCATGTGGGTG-CCTTCCCCC--G------GTCTC--ATTTGAT---ACAATCTAAT-ATCATTC-------------CAGGCCTCCGGTGACCGCTACGTTCCCCGTGCCGTCCTGGTCGATCTGGAGCCTGGCACCATGGATGCCGTCCGTGCCGGCCCCTTCGGCAAGCTTT Penicillium_wisconsinense_CBS128421 ATCGACAAGGGACTGACAGGACTACAGGCAGAACATTTCTGGCGAGCACGGCCTCGATGGCGATGGCCAGTGAGTAC--AATGTGATGG-CTTG-------GGTGC-GGGACA------CAACATCTGATGTTTTG--ACAGCTACAATGGCGCCTCCGACCTGCAGCTGGAGCGCATGAACGTCTACTTCAACCATGTGGGTG-CCTTCCCCC--G------GTCTC--ATTTGAT---ACAATCTAAT-ATCATTC-------------CAGGCCTCCGGTGACCGCTACGTTCCCCGTGCCGTCCTGGTCGATCTGGAGCCTGGCACCATGGATGCCGTCCGTGCCGGCCCCTTCGGCAAGCTTT Penicillium_marthaechristenseniae_CBS129213T ATCGACAAGGGACTGACAGGACTATAGGCAGAACATTTCTGGCGAGCACGGCCTCGATGGCGATGGCCAGTGAGTTC--AACGTAATGG-ATTG-------GGTGC-GGGCCA---------CGTCTAATGTTTTG--ACAGCTACAATGGCGCCTCCGATCTGCAGCTGGAGCGCATGAACGTCTACTTCAATCATGTGGGTGGCCTTCCCCC--G------GTCTC--ACTTGAT---ACAATCTAAT-ATCATCC-------------CAGGCCTCCGGTGACCGCTACGTTCCCCGTGCCGTCCTGGTCGATCTGGAGCCTGGCACCATGGATGCCGTCCGTGCCGGCCCCTTCGGCAAGCTTT Penicillium_williamettense_CBS129774T ATCGACAAGGGACTGACAGGACTACAGGCAGAACATTTCTGGCGAGCATGGCCTCGATGGCGATGGCCAGTGAGTAC--AATGTGATGG-CTTG-------GGTGC-GGAACA------TAACGTCTGATGTTTTG--ACAGCTACAATGGCGCCTCCGACCTGCAGCTGGAGCGCATGAACGTCTACTTCAACCATGTTTGTGGCCTTCCCCC--G------GTCTC--ACTTGAT---ACAATCTAAT-ATCATTC-------------CAGGCCTCCGGTGACCGCTATGTTCCCCGTGCCGTCCTGGTCGATCTGGAGCCTGGCACCATGGATGCCGTCCGTGCCGGCCCCTTCGGCAAGCTTT Penicillium_oregonense_CBS129775T ATCGACAAGGGACTGACAGGACTACAGGCAGAACATTTCTGGCGAGCACGGCCTCGATGGCGATGGCCAGTGAGTAC--AATGTGATGG-TTTG-------GGTGC-GGGACA------CAACGTCTGATGTTTTG--ACAGCTACAATGGCGCCTCCGACCTGCAGCTGGAGCGCATGAACGTCTACTTCAACCATGTGGGTGGCCTTCCCCC--G------GTCTC--ACTTGAT---ACAATCTAAT-GTCATTC-------------CAGGCATCCGGTGACCGCTACGTTCCCCGAGCCGTCCTGGTCGATCTGGAGCCTGGCACCATGGATGCCGTCCGTGCCGGCCCCTTCGGCAAGCTTT Penicillium_wollemicola_CBS137177T ATCGACAAGGGACTGACAGGACTACAGGCAGAACATTTCCGGCGAGCACGGCCTTGATGGCGATGGCCAGTGAGTAC--AACGTGATGG-ATTG-------GGTGC-GGGACA-------CACGTCTGATGTTTTG--ACAGCTACAATGGCGCCTCCGACCTGCAGCTGGAGCGCATGAACGTCTACTTCAACCATGTGGGTGGCCTTCCCCC--T------GTCTC--AATTGGT---ACAATCTAAT-ATCATCC-------------CAGGCCTCCGGTGACCGCTACGTTCCCCGTGCCGTCCTGGTCGATCTGGAGCCTGGCACCATGGATGCCGTCCGTGCCGGCCCCTTCGGCAAGCTTT Penicillium_cryptum_CBS271.89T ATTAACGTCGGACTGACTGTGCCGCAGGCAAAATATCGCGGGCGAACATGGCCTCGATGGCGATGGCCAGTAAGTTCTGACCCGGCCGGATTTGTTCCCGAGGCGCGGGGGGAGGGGATTGACGTCTGATCGTTTG--CTAGCTACAATGGCGCCTCGGACTTGCAGCTGGAGCGCATGAACGTCTACTTCAACCATGTGGGTGTCGCTGTTCC--C------GTTCCCAGATTGGC----CGATGCACG-GCATCTGATCGCATATTTTGTAGGCCTCTGGTGACCGCTACGTTCCCCGTGCCGTTCTGGTCGACCTCGAGCCCGGCACCATGGACGCCGTGCGTGCCGGCCCCTTCGGCAAGCTTT Penicillium_lassenii_CBS277.70T GAACAGGGGGAACTGACTCAATTGCAGGCAGCAAATCTCGAGCGAGCATGGCCTCGACGGTGATGGCCAGTAAGTTC--TTCGTGATGAAA--G-------GAAGTGGAAACA------CAAAATCTGATGCCGTC--CTAGATACAATGGCACCTCCGACTTGCAGCTGGAGCGCATGAACGTTTACTTCAACCATGTAAGTTGCATTGCGGTT-C------TGGAC--GGTTGATGGGCAGCTTTTTTGATATCTCTCTTCTTCGGGT-TAGGCCTCTGGTGACAAGTACGTTCCTCGTGCCGTTCTGGTTGACCTGGAGCCCGGTACTATGGATGCCGTCCGTGCCGGTCCCTTCGGCAAGCTCT Penicillium_ovatum_CBS136664T ACAGGCATCATACTGACTCTCGAACAGGCAGACCATTGCTGGCGAGCACGGCCTTGATGGCGATGGACAGTAAGTCGTATCAAAAACAC-CCTC-------GACAC-GACCAA-------GCAGTCTGACATGGTG--TTAGCTACAATGGCGCCTCTGACCTCCAGCTGGAGCGTATGAACGTCTACTTCAACCACGTATGTGACCAAAATTC--T------GATTG--TACTGAT---GCGAGCTA------ATTCTTCTATTTGTTTACAGGCCAGCGGTGACAAGTACGTTCCCCGTGCCGTTCTGGTCGACTTGGAGCCCGGTACCATGGATGCTGTCCGTGCCGGTCCCTTTGGCAAGCTCT Penicillium_laeve_CBS136665T ACAGCAATCATACTAACTCTCACACAGGCAGACCATTGCTGGCGAGCACGGCCTCGATGGCGATGGCCAGTAAGTTC--TAATCAACAC-CTTC-------GACAC-GAACAA-------CCGGCCTGATGTTTTC--TTAGCTACAATGGCGCCTCTGACCTCCAGCTGGAGCGTATGAACGTCTACTTCAACCACGTATGTGACCAATGCCT--C------AAACA--AGTTGAC------CTTTACT-AATGTTTTTCTCTTTGTTTACAGGCCAGCGGTGACAAGTACGTTCCCCGTGCCGTTCTGGTCGACTTGGAGCCCGGTACCATGGATGCTGTCCGTGCCGGTCCTTTTGGCAAGCTCT Penicillium_toxicarium_NRRL6172 AAAGACGTTATACTGACTGAATCCCAGGCAAACCATTGCTGGTGAGCATGGCCTTGACGGCGATGGCCAGTAAGTCG--CCCACAACATCCATC-------AACAC-GAACTA-------GCGGTCTGATGTTTTGGTATAGGTACGCTGGTGTCTCCGACCTCCAGCGCGAGCGCATGAACGTCTACTTCAACGAGGTAAGTGGCATCCGTAC--C------GCCTC--GATTGACCTTGTGCCTAATC-ATGATTTCTTTGCGTATCAATAGGCCAGCAATGACAAGTACGTTCCCCGTGCCGTCCTGGTCGACTTGGAGCCCGGTACCATGGATGCTGTCCGTGCCGGTCCCTTCGGCAAGCTCT Penicillium_restrictum_CBS367.48T GAGAACAGCATAATGACTTATTTTCAGGCAAACCATTGCTGGTGAGCATGGTCTTGATGGCGATGGCCAGTAAGTCA--CGCACAACACACGTC-------GACAC-GAACTA-------GCGGTCTGATGTTTTGGTATAGGTACGCTGGTGTCTCCGACCTCCAGCGCGAGCGCATGAACGTCTACTTCAACGAGGTATGTGTCATCTTTAC--C------GCCTT--GATTGAC---CTCATCTAATCATGATTTCTTTGTTTATC--TAGGCCAGCAACGACAAGTACGTTCCCCGTGCCGTCCTGGTCGACTTGGAGCCCGGTACCATGGATGCTGTCCGTGCCGGTCCCTTCGGGAAGCTTT Penicillium_corylophilum_CBS_330.79 AGAAACGATTTACTGACTTAATTCCAGGCAAACCATTGCTGGCGAGCACGGCCTTGACGGCGATGGCCAGTAAGTCG--CCCAAAATCCGACCT-------GACAC-GAAATA-------GCGGTCTGATGTTTTGATATAGGTACGCTGGTGTTTCCGATCTCCAGCGCGAGCGCATGAATGTCTACTTCAACGAGGTATGTGTCACACTAAT---------GCCTC--GACCGAT---CTAATCTAATCTCAATTTGTTTCCCTG----CAGGCTAGCAACGACAAGTACGTTCCCCGTGCCGTTCTGGTCGACTTGGAGCCCGGTACCATGGACGCTGTCCGTGCCGGTCCCTTCGGCAAGCTCT Penicillium_dimorphosporum_CBS456.70T ACAGGCATCATACTGACTCGAGTACAGGCAGACCATTGCTGGCGAGCACGGCCTTGACGGTGATGGCCAGTAAGTCC--CAAGAAACACGCTTC-------GACAC-GAACTA-------GCGGTCTGATGTTTTG--TTAGCTACAATGGCGCTTCCGACCTCCAGCTGGAGCGCATGAACGTCTACTTCAACCACGTAAGTGGATATTATGT--C------AAATC--AATTGGC------CTCTACT-AACACTCTTTTCTCTGTTTACAGGCCAGCGGTGACAAGTACGTTCCCCGTGCCGTTCTGGTCGACCTGGAGCCCGGTACCATGGATGCCGTCCGTGCCGGTCCCTTTGGCAAGCTCT ; END; END; BEGIN MRBAYES; Lset nst = 2 rates = invgamma; Prset statefreqpr = dirichlet ( 1 , 1 , 1 , 1 ); END; BEGIN ASSUMPTIONS; TYPESET * UNTITLED = unord: 1 - 368; END; BEGIN CODONS; CODESET * UNTITLED = universal: 1 - 368; END; BEGIN MESQUITECHARMODELS; ProbModelSet * UNTITLED = 'Jukes-Cantor': 1 - 368; END; Begin MESQUITE; MESQUITESCRIPTVERSION 2; TITLE AUTO; tell ProjectCoordinator; timeSaved 1409581122808; linkFile 'MEGA_Torulomyces_BenA.nxs.con.tre'; getEmployee #mesquite.minimal.ManageTaxa.ManageTaxa; tell It; setID 0 1061719462142096841; endTell; getEmployee #mesquite.charMatrices.ManageCharacters.ManageCharacters; tell It; setID 0 7910166402866009704; mqVersion 300; checksumv 0 3 2647525384 null getNumChars 368 numChars 368 getNumTaxa 48 numTaxa 48 short true bits 15 states 15 sumSquaresStatesOnly 323107.0 sumSquares 323107.0 longCompressibleToShort false usingShortMatrix true NumFiles 2 NumMatrices 1; mqVersion; endTell; getWindow; tell It; suppress; setResourcesState false false 321; setPopoutState 400; setExplanationSize 0; setAnnotationSize 0; setFontIncAnnot 0; setFontIncExp 0; setSize 1491 868; setLocation 8 22; setFont SanSerif; setFontSize 10; getToolPalette; tell It; endTell; desuppress; endTell; getEmployee #mesquite.trees.BasicTreeWindowCoord.BasicTreeWindowCoord; tell It; makeTreeWindow #1061719462142096841 #mesquite.trees.BasicTreeWindowMaker.BasicTreeWindowMaker; tell It; suppressEPCResponse; setTreeSource #mesquite.trees.StoredTrees.StoredTrees; tell It; setTreeBlockInt 0; toggleUseWeights off; endTell; setAssignedID 881.1409581076173.5943649705094924540; getTreeWindow; tell It; setExplanationSize 30; setAnnotationSize 20; setFontIncAnnot 0; setFontIncExp 0; setSize 1170 796; setLocation 8 22; setFont SanSerif; setFontSize 10; getToolPalette; tell It; endTell; setActive; getTreeDrawCoordinator #mesquite.trees.BasicTreeDrawCoordinator.BasicTreeDrawCoordinator; tell It; suppress; setTreeDrawer #mesquite.trees.SquareLineTree.SquareLineTree; tell It; setNodeLocs #mesquite.trees.NodeLocsStandard.NodeLocsStandard; tell It; branchLengthsToggle off; toggleScale on; toggleBroadScale off; toggleCenter on; toggleEven on; setFixedTaxonDistance 0; endTell; setEdgeWidth 4; showEdgeLines on; orientUp; endTell; setBackground White; setBranchColor Black; showNodeNumbers off; showBranchColors on; labelBranchLengths off; centerBrLenLabels on; showBrLensUnspecified on; showBrLenLabelsOnTerminals on; setBrLenLabelColor 0 0 255; setNumBrLenDecimals 6; desuppress; getEmployee #mesquite.trees.BasicDrawTaxonNames.BasicDrawTaxonNames; tell It; setColor Black; toggleColorPartition off; toggleColorAssigned on; toggleShadePartition off; toggleShowFootnotes on; toggleNodeLabels on; toggleCenterNodeNames off; toggleShowNames on; namesAngle ?; endTell; endTell; setTreeNumber 3; setDrawingSizeMode 0; toggleLegendFloat on; scale 0; toggleTextOnTree off; showWindow; endTell; desuppressEPCResponse; getEmployee #mesquite.trees.ColorBranches.ColorBranches; tell It; setColor Red; removeColor off; endTell; getEmployee #mesquite.ornamental.BranchNotes.BranchNotes; tell It; setAlwaysOn off; endTell; getEmployee #mesquite.ornamental.ColorTreeByPartition.ColorTreeByPartition; tell It; colorByPartition off; endTell; getEmployee #mesquite.ornamental.DrawTreeAssocDoubles.DrawTreeAssocDoubles; tell It; setOn on; setDigits 4; writeAsPercentage off; toggleCentred off; toggleHorizontal on; toggleWhiteEdges on; setFontSize 10; setOffset 0 0; endTell; getEmployee #mesquite.ornamental.DrawTreeAssocStrings.DrawTreeAssocStrings; tell It; setOn on; toggleCentred on; toggleHorizontal on; setFontSize 10; setOffset 0 0; endTell; getEmployee #mesquite.trees.TreeInfoValues.TreeInfoValues; tell It; panelOpen false; endTell; endTell; endTell; endTell; end;