NEXUS [File created by TreeBASE: 7/26/07 21:14:09] [Matrix accession#: M2843] BEGIN TAXA; TITLE M2843; DIMENSIONS NTAX=33; TAXLABELS Pinus_squamata Pinus_monticola_16S1 Pinus_monticola_13S1 Pinus_monticola_07S1 Pinus_monticola_06S1 Pinus_monticola_05S1 Pinus_monticola_04S4 Pinus_monticola_04S1 Pinus_monticola_02S3 Pinus_monticola_01S2 Pinus_monticola_01S1 Pinus_gerardiana Pinus_chiapensis_41S1 Pinus_chiapensis_39S1 Pinus_chiapensis_38S1 Pinus_chiapensis_35S1 Pinus_chiapensis_03S4 Pinus_chiapensis_02 Pinus_chiapensis_01KF Pinus_bungeana Pinus_ayacahuite_15S1 Pinus_ayacahuite_12S1 Pinus_ayacahuite_09S1 Pinus_ayacahuite_04S2 Pinus_ayacahuite_03S2 Pinus_ayacahuite_01S1 Pinus_strobus_26N Pinus_strobus_22S3 Pinus_strobus_11S2 Pinus_strobus_05S1 Pinus_strobus_04S1 Pinus_strobus_03S1 Pinus_strobus_02S1 ; END; BEGIN CHARACTERS; TITLE M2843; DIMENSIONS NCHAR=990; FORMAT DATATYPE = DNA MISSING = - GAP = # ; MATRIX Pinus_squamata AATTTCTTTATTACTCTTTTCTTCAAGCTGAGTCTGGGCCAGTGTTAGCCCCAATTTCCATTGCCCCAATCTCCAATGGAAGAATGGATCAATTTCCATTGCCGCAATCTCCAATGGAAGAATGGAGCTCCAGTGGAAGAACGATTTGCTATGCCCAACTGTGTAGCTGAACTCTAGGATCCTGTCAACAGGACTATATAGCCCTGTGTAGCCCTAACTGTACGGTGCTCCTGTCAATATTGTGTAGCCCAACTGTCAACATTGTGTAGCCCAACTGTACGATCCTGTCAACTGTGTAGACCAATTGTAGGATTCTGTCAACAGGACTGTGTAGCCCAACTGTATGATCCTTTTGTGTCGCCCCTTTGTAGCTT-AACTGTAGGATCCTTTCCACAGGACTGTGTAGCCCAACTGTAGGATCCTCTTTTTTAGCCCTGTGTAGCCAACTGTAGGATCATGTCAACAGGACTGTGTAGCCCAACTGTCCTGTCAATAGGTCTGTGTTGTCTAACTGTAGGATCCTGTCAACAGGGCAGCAATTGGAATTTCTTTATTACTTTGTTCACCTTTTTT-GTTAAACTCTGCACATCGAAGAAATTACCTACTGCAATATTGGATTTATGAATT-CTTTT-------AGTTTCAATGATATATTCCATTCATAATTGCAATATTGGACTTGTGAATTCTTTTAGTTTCAATGATATATTCCATTCATAATTGCAATATTGGACTTGTGAATTCTTTTAGTTTCAGTGATATATTCCATTCATAATTGCCTGATTAATCTGTTTCAGTGATATATTCCATTCATAATTGCCTGATTAATCTGTGAGCAGAGAAATAGCGTCTGGAACAATTTTAGATCCTGGGTCAGTGAAAGCCAATGACAAGACGGGCATGATCATTCCAGTGACAGTGCCTTACGACTTTTTGCTGAATATCATGAAAGACGTTGGAAGGGATTGGGATATTGACTATACATG Pinus_monticola_16S1 AATTTCTTTATTACTTTTTTCTTCAAGCTGAGTCTAGGCCATTGTTAGCCCCAATTTCCATTGCCCCAATCTCCAATGGAAGGATGGAACAATTTCCATTGCCGCAATCTCCAATGGAAGAATGGATCTCCAGTGGAAGAACGATTTGCTATGCCCAACTGTGTAGCTCAACTTTAGGATCCTGTCAACAGGACTATATAGCCCTGTGTAGCCCTAACTGTACGGTGCTCCTGTCAATATTGTGTAGCCAAACTGTCAACATTGTGTAGCCCAACTGT-----------------------------------------------------------------ATGATCCTTTTGTGTAGCCCCTTTGTAGC----------GGATCCTTTCCACAGGACTGTGTAGCCCAACTGTAGGATCCTCTTTTGTAGCCCTGTGTAGCCAACTGTAGGATCATGTCAACAGGACTCTGTAGCCCAACTGTCCTGTCAATAGGTCTGTGTTGCCTAACTGTAGGATCCTGTCAACAAGGCAGGAATTGGAATTTCTTTATTACTTTGTTCACCTTTTTT-GTTAATCTCTGCACATCGAAGAAATTACCTACTGCAATATTGGATTTATGAATTTCTTTT-------AGTTTCAGTGATATATTCCATTCATAATTGCAATATTGGACTTGTGAATTCTTTTAGTTTCAGTGATATATTCCATTCATAATTGCAATATTGGATTTATGAATTCTTTTAGTTTCAGTGATATATTCCATTCATAATTGCCTGATTGATCTGT-----------------------------------------GAGCAGAGAAATAGCGTCTGGAACAATTGCAGATCCTGGGTCAGTGAAAGCCAATGACAAGACGGGCATGATCATTCCAGTGACAGTGCCTTACGACTTTTTGCTGAATATCATGAAAGACGTTGGAAGGGATTGGGATATtGACTATacNNN Pinus_monticola_13S1 AATTtCTTTATTACTTTTTTTTTCAAGCTGAGTCTAGGCCATTGTTAGCCCCAATTTCCATTGCCCCAATCTCcAATGGAAGGATGGAACAATTTCCATTGCCGCAATCTCCAATGGAAGAATGGATCTCCAGTGGAAGAACGATTTGCTATGCCCAACTGTGTAGCTCAACTTTAGGATCCTGTCAACAGGACTATATAGCCTTGTGTAGCCCTAACTGTACGGTGCTCCTGTCAATATTGTGTAGCCAAACTGTCAACATTGTGTAGCCCAACTGT-----------------------------------------------------------------ATGATCCTTTTGTGTGGCCCCTTTGTAGCTTTAACTGTAGGATCCTTTCCACAGGACTGTGTAGCCCAACTGTAGGATCCTCTTTTGTAGCCCTGTGTAGCCAACTGTAGGATCATGTCAACAGGACTGTGTAGCCCAACTGTCCTGTCAATAGGTCTGTGTTGCCTAACTATAGGATCCTGTCAACAAGGCAGGAATTGGAATTTCTTTATTACTTTGTTCACCTTTTTT-GTTAATCTCTGCACATCGAAGAAATTACCTACTGCAATATTGGATTTATGAATT-CTTTT-------AGTTTCAGTGATATATTCCATTCATAATTGCAATATTGGACTTGTGAATTCTTTTAGTTTCAGTGATATATTCCATTCATAATTGCAATATTGGATTTATGAATTCTTTTAGTTTCAGTGATATATTCCATTAATAATTGCCT-----ATTTGT-----------------------------------------GAGCAGAGAAATAGCGTCTGGAACAATTGCAGATCCTGGGTCAGTGAAAGCCAATGACAAGACGGGCATGATCATTCCAGTGACAGTGCCTTACGACTTTTTGCTGAATATCATGAAAGACGTTGGAAGGGATTGGGATATtGACTAtacatg Pinus_monticola_07S1 AATTTCTTTATTAaTTTTTTCTTCAAGCTGAGTCTAGGCCAGTGTTAGCCCCAATTTCCATTGCCCCAATCTCCAATGGAAGGATGGAACAATTTCCATTGCCGCAATCTCCAATGGAAGAATGGATCTCCAGTGGAAGAACGATTTGCTATGCCCAACTGTGTAGCTCAACTTTAGGATCCTGTCAACAGGACTATATAGCCCTGTGTAGCCCTAACTGTACGGTGCTCCTGTCAATATTGTGTAGCCAAACTGTCAACATTGTGTAGCCCAACTGT----------------------------------------CAACAT---TGTGTAGCCCAACTGTATGATCCTTTTGTGTAGCCCCTTTGTAGCTTTAACTGTAGGATCCTTTCCACAGGACTGTGTAGCCCAACTGTAGGATCCTCTTTTGTAGCCCTGTGTAGCCAACTGTAGGATCATGTCAACAGGACTCTGTAGCCCAACTGTCCTGTCAATAGGTCTGTGTTGCCTAACTGTAGGATCCTGTCAACAGGGCAGGAATTGGAATTTTTTTATTACTTTGTTCACCTTTTTTTGTTAATCTCTGCACATCGAAGAAATTACCTACTGCAATATTGGATTTATGAATT-CTTTT-------AGTTTCAGTGATATATTCCATTAATAATTGCAATATTGGACTTGTGAATTCTTTTAGTTTCAGTGATATATATCATTCATGATTGCAATATTGGATTTATGAATTCTTTTAGTTTCAGTGATATAGTCCATTCATAATTGCCTGATTGATCTGT-----------------------------------------GAGCAGAGAAATAGCGTCTGGAACAATTGCAGATCCTGGGTCAGTGAAAGCCAATGACAAGACGGGCATGATCATTCCAGTGACAGTGCCTTACGACTTTTTGCTGAATATCATGAAAGACGTTGGAAGGGATTGGGATATTGACTATACATG Pinus_monticola_06S1 AATTTCTTTATTAATTTTTTCTTCAAGCTGAGTCTAGGCCAGTGTtAGCCCCAATTTCCATTGCCCCAATCTCCAATGGAAGGATGGAACAATTTCCATTGCCGCAATCTCCAATGGAAGAATGGATCTCCAGTGGAAGAACGATTTGCTATGCCCAACTGTGTAGCTCAACTTTAGGATCCTGTCAACAGGACTATATAGCCCTGTGTAGCCCTAACTGTACGGTGCTCCTGTCAATATTGTGTAGCCAAACTGTCAACATTGTGTAGCCCAACTGTACGATCCTGTCAACTGTGTAGACCAATTGTAGGATTCTGTCAACAGGACTGTGTAGCCCAACTGTATGATCCTTTTGTGTAGCCCCTTTGTAGCTTTAACTGTAGGATCCTTTCCACAGGACTGTGTAGCCCAACTGTAGGATCCTCTTTTGTAGCCCTGTGTAGCCAACTGTAGGATCATGTCAACAGGACTCTGTAGCCCAACTGTCCTGTCAATAGGTCTGTGTTGCCTAACTGTAGGATCCTGTCAACAGGGCAGGAATTGGAATTTTTTTATTACTTTGTTCACCTTTTTTTGTTAATCTCTGCACATCGAAGAAATTACCTACTGCAATATTGGATTTATGAATT-CTTTT-------AGTTTCAGTGATATATTCCATTAATAATTGCAATATTGGACTTGTGAATTCTTTTAGTTTCAGTGATATATATCATTCATGATTGCAATATTGGATTTATGAATTCTTTTAGTTTCAGTGATATAGTCCATTCATAATTGCCTGATTGATCTGT-----------------------------------------GAGCAGAGAAATAGCGTCTGGAACAATTGCAGATCCTGGGTCAGTGAAAGCCAATGACAAGACGGGCATGATCATTCCAGTGACAGTGCCTTACGACTTTTTGCTGAATATCATGAAAGACGTTGGAAGGGATTGGGATATtGACtatacatg Pinus_monticola_05S1 AATTTCTTTATTAATTTTTTCTTCAAGCTGAGTCTAGGCCAGTGTTAGCCCCAATTTCCATTGCCCCAATCTCCAATGGAAGGATGGAACAATTTCCATTGCCGCAATCTCCAATGGAAGAATGGATCTCCAGTGGAAGAACGATTTGCTATGCCCAACTGTGTAGCTCAACTTTAGGATCCTGTCAACAGGACTATATAGCCCTGTGTAGCCCTAACTGTACGGTGCTCCTGTCAATATTGTGTAGCCAAACTGTCAACATTGTGTAGCCCAACTGT----------------------------------------CAACAT---TGTGTAGCCCAACTGTATGATCCTTTTGTGTAGCCCCTTTGTAGCTTTAACTGTAGGATCCTTTCCACAGGACTGTGTAGCCCAACTGTAGGATCCTCTTTTGTAGCCCTGTGTAGCCAACTGTAGGATCATGTCAACAGGACTCTGTAGCCCAACTGTCCTGTCAATAGGTCTGTGTTGCCTAACTGTAGGATCCTGTCAACAGGGCAGGAATTGGAATTTTTTTATTACTTTGTTCACCTTTTTTTGTTAATCTCTGCACATCGAAGAAATTACCTACTGCAATATTGGATTTATGAATT-CTTTT-------AGTTTCAGTGATATATTCCATTAATAATTGCAATATTGGACTTGTGAATTCTTTTAGTTTCAGTGATATATATCATTCATGATTGCAATATTGGATTTATGAATTCTTTTAGTTTCAGTGATATAGTCCATTCATAATTGCCTGATTGATCTGT-----------------------------------------GAGCAGAGAAATAGCGTCTGGAACAATTGCAGATCCTGGGTCAGTGAAAGCCAATGACAAGACGGGCATGATCATTCCAGTGACAGTGCCTTACGACTTTTTGCTGAATATCATGAAAGACGTTGGAAGGGATTGGGATATtGACTAtacatg Pinus_monticola_04S4 AaTTTCTTTATTAAtTTTTTCTTCAAGCTGAGTCTAGgCCAGTGTTAGCCCCAATTTCCATTGCCCCAATCTCCAATGGAAGGATGGAACAATTTCCATTGCCGCAATCTCCAATGGAAGAATGGATCTCCAGCGGAAGAACGATTTGCTATGCCCAACTGTGTAGCTCAACTTTAGGATCCTGTCAACAGGACTATATAGCCCTGTGTAACCCTAACTGTACGGTGCTCCTGTCAATATTGTGTAGCCAAACTGTCAACATTGTGTAGCCCAACTGTACGATCCTGTCAACTGTGTAGACCAATTGTAGGATTCTGTCAACAGGACTGTGTAGCCCAACTGTATGATCCTTTTGTGTAGCCCCTTTGTAGCTTTAACTGTAGGATCCTTTCCACAGGACTGTGTAGCCCAACTGTAGGATCCTCTTTTGTAGCCCTGTGTAGCCAACTGTAGGATCATGTCAACAGGACTCTGTAGCCCAACTGTCCTGTCAATAGGTCTGTGTTGCCTAACTGTAGGATCCTGTCAACAGGGCAGGAATTGGAATTTTTTTATTACTTTGTTCACCTTTTTTTGTTAATCTCTGCACATCGAAGAAATTACCTACTGCAATATTGGATTTATGAATT-CTTTT-------AGTTTCAGTGATATATTCCATTAATAATTGCAATATTGGACTTGTGAATTCTTTTAGTTTCAGTGATATATATCATTCATGATTGCAATATTGGATTTATGAATTCTTTTAGTTTCAGTGATATAGTCCATTCATAATTGCCTGATTGATCTGT-----------------------------------------GAGCAGAGAAATAGCGTCTGGAACAATTGCAGATCCTGGGTCAGTGAAAGCCAATGACAAGACGGGCATGATCATTCCAGTGACAGTGCCTTACGACTTTTTGCTGAATATCATGAAAGACGTTGGAAGGGATTGGGATATtGACTAtacatg Pinus_monticola_04S1 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCTCCAATGGAAGGATGGAACAATTTCCATTGCCGCAATCTCCAATGGAAGAATGGATCTCCAGTGGAAGAACGATTTGCTATGCCCAACTGTGTAGCTCAACTTTAGGATCCTGTCAACAGGACTATATAGCCTTGTGTAGCCCTAACTGTACGGTGCTCCTGTCAATATTGTGTAGCCAAACTGTCAACATTGTGTAGCCAAACTGT----------------------------------------CAACAT---TGTGTAGCCAAACTGTATGATCCTTTTGTGTAGCCCCTTTGTAGCTTTAACTGTAGGATCCTTTCCACAGGACTGTGTAGCCCAACTGTAGGATCCTCTTTTGTAGCCCTGTGTAGCCAACTGTAGGATCATGTCAACAGGACTGTGTAGACCAACTGTCCTGTCAATAGGTCTGTGTTGCCTAACTGTAGGATCCTGTCAACAAGGCAGGAATTGGAATTTCTTTATTACTTTGTTCACCTTTTTT-GTTAATCTCTGCACATCGAAGAAATTACCTACTGCAATATTGGATTTATGAATT-CTTTT-------AGTTTCAGTGATATATTCCATTCATAATTGCAATATTGGACTTGTGAATTCTTTTAGTTTCAGTGATATATTCCATTCATAATTGCAATATTGGATTTATGAATTCTTTTAGTTTCAGTGATATATTCCATTCATAATTGCCTGATTGATCTGT-----------------------------------------GAGCAGAGAAATAGCGTCTGGAACAATTGCAGATCCTGGGTCAGTGAAAGCCAATGACAAGACGGGCATGATCATTCCAGTGACAGTGCCTTACGACTTTTTGCTGAATATCATGAAAGACGTTGGAAGGGATTGGGATATTGACTATACATG Pinus_monticola_02S3 NATTTCTTTATTAATTTTTTCTTCaAGCTGAGTCTAGGCCAGTGTTAGCCCCAATTTCCATTGCCCCAATCTCCAATGGAAGGATGGAACAATTTCCATTGCCGCAATCTCCAATGGAAGAATGGATCTCCAGTGGAAGAACGATTTGCTATGCCCAACTGTGTAGCTCAACTTTAGGATCCTGTCAACAGGACTATATAGCCCTGTGTAGCCCTAACTGTACGGTGCTCCTGTCAATATTGTGTAGCCAAACTGTCAACATTGTGTAGCCCAACTGT----------------------------------------CAACAT---TGTGTAGCCCAACTGTATGATCCTTTTGTGTAGCCCCTTTGTAGCTTTAACTGTAGGATCCTTTCCACAGGACTGTGTAGCCCAACTGTAGGATCCTCTTTTGTAGCCCTGTGTAGCCAACTGTAGGATCATGTCAACAGGACTCTGTAGCCCAACTGTCCTGTCAATAGGTCTGTGTTGCCTAACTGTAGGATCCTGTCAACAGGGCAGGAATTGGAATTTTTTTATTACTTTGTTCACCTTTTTTTGTTAATCTCTGCACATCGAAGAAATTACCTACTGCAATATTGGATTTATGAATT-CTTTT-------AGTTTCAGTGATATATTCCATTAATAATTGCAATATTGGACTTGTGAATTCTTTTAGTTTCAGTGATATATATCATTCATGATTGCAATATTGGATTTATGAATTCTTTTAGTTTCAGTGATATAGTCCATTCATAATTGCCTGATTGATCTGT-----------------------------------------GAGCAGAGAAATAGCGTCTGGAACAATTGCAGATCCTGGGTCAGTGAAAGCCAATGACAAGACGGGCATGATCATTCCAGTGACAGTGCCTTACGACTTTTTGCTGAATATCATGAAAGACGTTGGAAGGGATTGGGATATTGACTATACATG Pinus_monticola_01S2 AATTTCTTTATTAATTTTTTCTTCAAGCTGAGTCTAGGCCAGTGTTAGCCCCAATTTCCATTGCCCCAATCTCCAATGGAAGGATGGAACAATTTCCATTGCCGCAATCTCCAATGGAAGAATGGATCTCCAGTGGAAGAACGATTTGCTATGCCCAACTGTGTAGCTCAACTTTAGGATCCTGTCAACAGGACTATATAGCCCTGTGTAGCCCTAACTGTACGGTGCTCCTGTCAACATTGTGTAGCCCAACTGTCAACATTGTGTAGCCCAACTGT-----------------------------------------------------------------ATGATCCTTTTGTGTAGCCCCTTTGTAGCTTTAACTGTAGGATCCTTTCCACAGGACTGTGTAGCCCAACTGTAGGATCCTCTTTTGTAGCCCTGTGTAGCCAACTGTAGGATCATGTCAACAGGACTCTGTAGCCCAACTGTCCTGTCAATAGGTCTGTGTTGCCTAACTGTAGGATCCTGTCAACAGGGCAGGAATTGGAATTTTTTTATTACTTTGTTCACCTTTTTTTGTTAATCTCTGCACATCGAAGAAATTACCTACTGCAATATTGGATTTATGAATT-CTTTT-------AGTTTCAGTGATATATTCCATTAATAATTGCAATATTGGACTTGTGAATTCTTTTAGTTTCAGTGATATATATCATTCATGATTGCAATATTGGATTTATGAATTCTTTTAGTTTCAGTGATATAGTCCATTCATAATTGCCTGATTGATCTGT-----------------------------------------GAGCAGAGAAATAGCGTCTGGAACAATTGCAGATCCTGGGTCAGTGAAAGCCAATGACAAGACGGGCATGATCATTCCAGTGACAGTGCCTTACGACTTTTTGCTGAATATCATGAAAGACGTTGGAAGGGATTGGGATATTGACTATACATG Pinus_monticola_01S1 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAATCTCCAATGGAAGGATGGAACAATTTCCATTGCCGCAATCTCCAATGGAAGAATGGATCTCCAGTGGAAGAACGATTTGCTATGCCCAACTGTGTAGCTCAACTTTAGGATCCTGTCAACAGGACTATATAGCCCTGTGTAGCCCTAACTGTACGGTGCTCCTGTCAATATTGTGTAGCCAAACTGTCAACATTGTGTAGCCCAACTGT----------------------------------------CAACAT---TGTGTAGCCCAACTGTATGATCCTTTTGTGTAGCCCCTTTGTAGCTTTAACTGTAGGATCCTTTCCACAGGACTGTGTAGCCCAACTGTAGGATCCTCTTTTGTAGCCCTGTGTAGCCAACTGTAGGATCATGTCAACAGGACTCTGTAGCCCAACTGTCCTGTCAATAGGTCTGTGTTGCCTAACTGTAGGATCCTGTCAACAGGGCAGGAATTGGAATTTTTTTATTACTTTGTTCACCTTTTTTTGTTAATCTCTGCACATCGAAGAAATTACCTACTGCAATATTGGATTTATGAATT-CTTTT-------AGTTTCAGTGATATATTCCATTAATAATTGCAATATTGGACTTGTGAATTCTTTTAGTTTCAGTGATATATATCATTCATGATTGCAATATTGGATTTATGAATTCTTTTAGTTTCAGTGATATAGTCCATTCATAATTGCCTGATTGATCTGT-----------------------------------------GAGCAGAGAAATAGCGTCTGGAACAATTGCAGATCCTGGGTCAGTGAAAGCCAATGACAAGACGGGCATGATCATTCCAGTGACAGTGCCTTACGACTTTTTGCTGAATATCATGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN Pinus_gerardiana AATTTCTTTATTACTTTTTTCTTCAAGCTGAGTCTAGGCCAGTGTTAGCCCCAATTTCCATTACCCCAATCTCCAATGGAAGAATGGATCAATTTCCATTGCCGCAATCTCCAATGGAAGAATGGATCTCCAGTGGAAGAACGATTTGCTATGCCCAACTGTGTAGCTCAACTTTAGGATCCTGTCAACAGGACTATATAGCCCTGTGTAGCCCTAACTGTACGGTGCTCCTGTCAATATTGTGTAGCCCAACTGTCAACATTGTGTAGCCCAACTGTACGATCCTGTCAACTGTGTAGACCAATTGTAGGATTCTGTCAACAGGACTGTGTAGCCC--------------------------CTTTGTAGCGT-AACTGGAGGATCCTTTCCACAGGACTGTGTAGCCCAACTGTAGGATCCTCTTTTGTAGCCCTGTGTAGCCAACTGTAGGATCATGTCAACAGGACTGTGTAGCCCAACTGTCCTGTCAATAGGTCTGTGTTGTCTAACTGTAGGATCCTGTCAACAGGGCAGGAATTGGAATTTCTTTATTACTTTGTTCACCTTTTTT-GTTAAACTCTGCACATCGAAGAAATTACCTACTGCAATATTGGATTTATGAATT-CTTTT-------AGTTTCAATGATATATTCCATTCATAATTGCAATATTGGACTCGTGAATTCTTTTAGTTTCAGTGATATATTCCATTCATAATTGCAATATTGGATTTATGAATTCTTTTAGTTTCAGTGATATATTCCATTCATAATTGCCTGA--------T-----------------------------------------GAGCAGAGAAATAGCGTCTGGAACAATTTTAGATCCTGGGTCAGTGAAAGCCAATGACAAGACGGGCATGATCATTCCAGTGACAGTGCCTTACGACTTTTTGCTGAATATCATGAAAGATGTTGGAAGGGATTGGGATATtGACTATaCNNN Pinus_chiapensis_41S1 AATTTCTTTATTACTTTTTTCTTCAAGCTGAGTCTAGGCTAGTGTTAGCCCCAATTTCCATTGCCCCAATCTCCAATGGAAGGATGGATCAATTTCCATTGCCGCAATCTCCAATGGAAGAATGGATCTCCAGTGGAAGAACGATTTGCTATGCCCAACTGTGTAGCTCA---------TCCTGTCAACAGGACTATATAGCCCTGTGTAGCCCTAACTGTACGGTGCTCCTGTCAATATTGTGTAGACAAACTGTCAACATTGTGTAGCCCAACTGTACGATCCTGTCAACTGTGTAGACCAATTGTAGGATTCTGTCAACAGGACTGTGTAGCCCAACTGTATGATCCTTTTGTGTAGCCCCTTTGTAGCTTTAACTGTAGGATCCTTTCCACAGGACTGTATTGCCCAACTGTAGGATCCTCTTTTGTAGCCCTGTGTAGCCAACTGTAGGATCATGTCAACAGGACTCTGAAGCCCAACTGTCCTGTCAATAGGTCTGTGTTGCCTAACTGTAGGATCCTGTCAACAGGGCAGGAATTGGAATTTCTTTATTACTATGTTAACCTTTTTT-GTTAATCTCTGCACATCGAAGAAATTACCTACTGCAATATTGGATTTATGAATT-CTTTT-------AGTTTCAGTGATATATTCCATTCATAATTGCAATATTGGACTTGTGAATTCTTTTAGTTTCAGTGATATATTCCATTCATAATTGC-------------------------------------------------------CTGATTGATCTGT-----------------------------------------GAGCAGAGAAATAGCGTCTGGAACAATTGCAGATCCTGGGTCAGTGAAAGCCAATGACAAGACGGGCATGATCATTCCAGTGACAGTGCCTTACGACTTTTTGCTGAATATCATGAAAGACGTTGGAAGGGATTGGGATATtGACTATaNNNN Pinus_chiapensis_39S1 AATTTCTTTATTACTTTTTTCTTCAAGCTGAGTCTAGGCTAGTGTTAGCCCCAATTTCCATTGCCCCAATCTCCAATGGAAGGATGGATCAATTTCCATTGCCGCAATCTCCAATGGAAGAATGGATCTCCAGTGGAAGAACGATTTGCTATGCCCAACTGTGTAGCTCA---------TCCTGTCAACAGGACTATATAGCCCTGTGTAGCCCTAACTGTACGGTGCTCCTGTCAATATTGTGTAGACAAACTGTCAACATTGTGTAGCCCAACTGTACGATCCTGTCAACTGTGTAGACCAATTGTAGGATTCTGTCAACAGGACTGTGTAGCCCAACTGTATGATCCTTTTGTGTAGCCCCTTTGTAGCTTTAACTGTAGGATCCTTTCCACAGGACTGTATTGCCCAACTGTAGGATCCTCTTTTGTAGCCCTGTGTAGCCAACTGTAGGATCATGTCAACAGGACTCTGAAGCCCAACTGTCCTGTCAATAGGTCTGTGTTGCCTAACTGTAGGATCCTGTCAACAGGGCAGGAATTGGAATTTCTTTATTACTATGTTAACCTTTTTT-GTTAATCTCTGCACATCGAAGAAATTACCTACTGCAATATTGGATTTATGAATT-CTTTT-------AGTTTCAGTGATATATTCCATTCATAATTGCAATATTGGACTTGTGAATTCTTTTAGTTTCAGTGATATATTCCATTCATAATTGC-------------------------------------------------------CTGATTGATCTGT-----------------------------------------GAGCAGAGAAATAGCGTCTGGAACAATTGCAGATCCTGGGTCAGTGAAAGCCAATGACAAGACGGGCATGATCATTCCAGTGACAGTGCCTTACGACTTTTTGCTGAATATCATGAAAGACGTTGGAAGGGATTGGGATATtGACTAtaNNNN Pinus_chiapensis_38S1 AATTTCTTTATTACTTTTTTCTTCAAGCTGAGTCTAGGCTAGTGTTAGCCCCAATTTCCATTGCCCCAATCTCCAATGGAAGGATGGATCAATTTCCATTGCCGCAATCTCCAATGGAAGAATGGATCTCCAGTGGAAGAACGATTTGCTATGCCCAACTGTGTAGCTCA---------TCCTGTCAACAGGACTATATAGCCCTGTGTAGCCCTAACTGTACGGTGCTCCTGTCAATATTGTGTAGACAAACTGTCAACATTGTGTAGCCCAACTGTACGATCCTGTCAACTGTGTAGACCAATTGTAGGATTCTGTCAACAGGACTGTGTAGACCAACTGTATGATCCTTTTGTGTAGCCCCTTTGTAGCTTTAACTGTAGGATCCTTTCCACAGGACTGTATTGCCCAACTGTAGGATCCTCTTTTGTAGCCCTGTGTAGCCAACTGTAGGATCATGTCAACAGGACTCTGAAGCCCAACTGTCCTGTCAATAGGTCTGTGTTGCCTAACTGTAGGATCCTGTCAACAGGGCAGGAATTGGAATTTCTTTATTACTATGTTAACCTTTTTT-GTTAATCTCTGCACATCGAAGAAATTACCTACTGCAATATTGGATTTATGAATT-CTTTT-------AGTTTCAGTGATATATTCCATTCATAATTGCAATATTGGACTTGTGAATTCTTTTAGTTTCAGTGATATATTCCATTCATAATTGC-------------------------------------------------------CTGATTGATCTGT-----------------------------------------GAGCAGAGAAATAGCGTCTGGAACAATTGCAGATCCTGGGTCAGTGAAAGCCAATGCCAAGACGGGCATGATCATTCCAGTGACAGTGCCTTACGACTTTTTGCTGAATATCATGAAAGACGTTGGAAGGGATTGGGATATtGACTATANNNN Pinus_chiapensis_35S1 AATTTCTTTATTACTTTTTTCTTCAAGCTGAGTCTAGGCTAGTGTTAGCCCCAATTTCCATTGCCCCAATCTCCAATGGAAGGATGGATCAATTTCCATTTCCGCAATCTCCAATGGAAGAATGGATCTCCAGTGGAAGAACGATTTGCTATGCCCAACTGTGTAGCTCA---------TCCTGTCAACAGGACTATATAGCCCTGTGTAGCCCTAACTGTACGGTGCTCCTGTCAATATTGTGTAGACAAACTGTCAACATTGTGTAGCCCAACTGTACGATCCTGTCAACTGTGTAGACCAATTGTAGGATTCTGTCAACAGGACTGTGTAGCCCAACTGTATGATCCTTTTGTGTAGCCCCTTTGTAGCTTTAACTGTAGGATCCTTTCCACAGGACTGTATTGCCCAACTGTAGGATCCTCTTTTGTAGCCCTGTGTAGCCAACTGTAGGATCATGTCAACAGGACTCTGAAGCCCAACTGTCCTGTCAATAGGTCTGTGTTGCCTAACTGTAGGATCCTGTCAACAGGGCAGGAATTGGAATTTCTTTATTACTATGTTCACCTTTTTT-GTTAATCTCTGCGCATCGAAGAAATTACCTACTGCAATATTGGATTTATGAATT-CTTTT-------AGTTTCAGTGATATATTCCATTCATAATTGCAATATTGGACTTGTGAATTCTTTTAGTTTCAGTGATATATTCCATTCATAATTGC-------------------------------------------------------CTGATTGATCTGT-----------------------------------------GAGCAGAGAAATAGCGTCTGGAACAATTGCAGATCCTGGGTCAGTGAAAGCCAATGACAAGACGGGCATGATCATTCCAGTGACAGTGCCTTACGACTTTTTGCTGAATATCATGAAAGACGTTGGTAGGGATTGGGATATtGACTATacatg Pinus_chiapensis_03S4 AaTTTCTTTATtACTTTTTTCTTCAaGCTGAGTCTAGGCTAGTGTTAGCCCCAATTTCCATTGCCCCAATCTCCAATGGAAGGATGGATCAATTTCCATTTCCGCAATCTCCAATGGAAGAATGGATCTCCAGTGGAAGAACGATTTGCTATGCCCAACTGTGTAGCTCA---------TCCTGTCAACAGGACTATATAGCCCTGTGTAGCCCTAACTGTACGGTGCTCCTGTCAATATTGTGTAGACAAACTGTCAACATTGTGTAGCCCAACTGTACGATCCTGTCAACTGTGTAGACCAATTGTAGGATTCTGTCAACAGGACTGTGTAGCCCAACTGTATGATCCTTTTGTGTAGCCCCTTTGTAGCTTTAACTGTAGGATCCTTTCCACAGGACTGTATTGCCCAACTGTAGGATCCTCTTTTGTAGCCCTGTGTAGCCAACTGTAGGATCATGTCAACAGGACTCTGAAGCCCAACTGTCCTGTCAATAGGTCTGTGTTGCCTAACTGTAGGATCCTGTCAACAGGGCAGGAATTGGAATTTCTTTATTACTATGTTCACCTTTTTT-GTTAATCTCTGCGCATCGAAGAAATTACCTACTGCAATATTGGATTTATGAATT-CTTTT-------AGTTTCAGTGATATATTCCATTCATAATTGCAATATTGGACTTGTGAATTCTTTTAGTTTCAGTGATATATTCCATTCATAATTGC-------------------------------------------------------CTGATTGATCTGT-----------------------------------------GAGCAGAGAAATAGCGTCTGGAACAATTGCAGATCCTGGGTCAGTGAAAGCCAATGACAAGACGGGCATGATCATTCCAGTGACAGTGCCTTACGACTTTTTGCTGAATATCATGAAAGACGTTGGTAGGGATTGGGATATTGACtatacatg Pinus_chiapensis_02 NATTTCTTTATTACTTTTTTCTTCAAGCTGAGTCTAGGCTAGTGTTAGCCCCAATTTCCATTGCCCCAATCTCCAATGGAAGGATGGATCAATTTCCATTGCCGCAATCTCCAATGGAAGAATGGATCTCCAGTGGAAGAACGATTTGCTATGCCCAACTGTGTAGCTCA---------TCCTGTCAACAGGACTATATAGCCCTGTGTAGCCCTAACTGTACGGTGCTCCTGTCAATATTGTGTAGACAAACTGTCAACATTGTGTAGCCCAACTGTACGATCCTGTCAACTGTGTAGACCAATTGTAGGATTCTGTCAACAGGACTGTGTAGCCCAACTGTATGATCCTTTTGTGTAGCCCCTTTGTAGCTTTAACTGTAGGATCCTTTCCACAGGACTGTATTGCCCAACTGTAGGATCCTCTTTTGTAGCCCTGTGTAGCCAACTGTAGGATCATGTCAACAGGACTCTGAAGCCCAACTGTCCTGTCAATAGGTCTGTGTTGCCTAACTGTAGGATCCTGTCAACAGGGCAGGAATTGGAATTTCTTTATTACTATGTTAACCTTTTTT-GTTAATCTCTGCACATCGAAGAAATTACCTACTGCAATATTGGATTTATGAATT-CTTTT-------AGTTTCAGTGATATATTCCATTCATAATTGCAATATTGGACTTGTGAATTCTTTTAGTTTCAGTGATATATTCCATTCATAATTGC-------------------------------------------------------CTGATTGATCTGT-----------------------------------------GAGCAGAGAAATAGCGTCTGGAACAATTGCAGATCCTGGGTCAGTGAAAGCCAATGACAAGACGGGCATGATCATTCCAGTGACAGTGCCTTACGACTTTTTGCTGAATATCATGAAAGACGTTGGAAGGGATTGGGATATNGACTATacAtN Pinus_chiapensis_01KF NATTTCTTTATTACTTTTTTCTTCAAGCTGAGTCTAGGCTAGTGTTAGCCCCAATTTCCATTGCCCCAATCTCCAATGGAAGGATGGATCAATTTCCATTGCCGCAATCTCCAATGGAAGAATGGATCTCCAGTGGAAGAACGATTTGCTATGCCCAACTGTGTAGCTCA---------TCCTGTCAACAGGACTATATAGCCCTGTGTAGCCCTAACTGTACGGTGCTCCTGTCAATATTGTGTAGACAAACTGTCAACATTGTGTAGCCCAACTGTACGATCCTGTCAACTGTGTAGACCAATTGTAGGATTCTGTCAACAGGACTGTGTAGCCCAACTGTATGATCCTTTTGTGTAGCCCCTTTGTAGCTTTAACTGTAGGATCCTTTCCACAGGACTGTATTGCCCAACTGTAGGATCCTCTTTTGTAGCCCTGTGTAGCCAACTGTAGGATCATGTCAACAGGACTCTGAAGCCCAACTGTCCTGTCAATAGGTCTGTGTTGCCTAACTGTAGGATCCTGTCAACAGGGCAGGAATTGGAATTTCTTTATTACTATGTTAACCTTTTTT-GTTAATCTCTGCACATCGAAGAAATTACCTACTGCAATATTGGATTTATGAATT-CTTTT-------AGTTTCAGTGATATATTCCATTCATAATTGCAATATTGGACTTGTGAATTCTTTTAGTTTCAGTGATATATTCCATTCATAATTGC-------------------------------------------------------CTGATTGATCTGT-----------------------------------------GAGCAGAGAAATAGCGTCTGGAACAATTGCAGATCCTGGGTCAGTGAAAGCCAATGACAAGACGGGCATGATCATTCCAGTGACAGTGCCTTACGACTTTTTGCTGAATATCATGAAAGACGTTGGAAGGGATTGGGATATNGACTATacAtN Pinus_bungeana AATTTCTTTATCACTTTTTTCTTCAAGCTGAGTCTAGTCCAGTGTTAGGCCCAATTTCCATTACCCCAATCTCCAATGGAAGAATGGATCAATTTCCATTGCCGCAATCTCCAATGGAAGAATGGATCTCCAATG------------------CCCAACTGTGTAGCTCAACTTAAGGATCCTGTTAACAGGACTATATAGCCCTGTGTAGCCCTAACTGTACGGTGCTCCTGTCAATATTGTGTAGCCCAACTGTCAACATTGTGTAGCCCAACTGTACGATCCTGTCAACTGTGTAGACCAATTGTAGGATTCTGTCAACAGGACGGTGTAGCCC--------------------------CTTTGTAGCGT-AACTGGAGGATCCTTTCCACAGGACTGTGTAGCCCAACTGTAGGATCCTCTTTTGTAGCCCTGTGTAGCCAACTGTAGGATCATGTCAACAGGACTGTGTAGCCCAACTGTCCTGTCAATAGGTCTGTGTTGTCTAACTGTAGGATCCTGTCAACAGGGCAGGAATTGGAATTTCTTTATTACTTTGTTCACCTTTTTT-GTTAAACCCTGCACATCGAAGAAATTACCTACTGCAATATTGGATTAATGAATT-CTTTCAGCTTTTAGTTTCAGTGATATATTCCATTCATAATTGCAATATTGGACTTGTGAATTCTTTTAGTTTCAGTGATATATTCCATTCATAATTGC-------------------------------------------------------CTGATTAATCTGT-----------------------------------------GATCAGAGAAATAGCGTCTGGAACAATTTTAGATCCTGGGTCAGTGAAAGCCAATGACAAGACGGGCATGATCATTCCAGTGACAGTGCCTTACGACTTTTTGCTGAATATCATGaaAGACGTTGGAAGGGATTGGgATATTGACTATACATG Pinus_ayacahuite_15S1 AATTTCTTTATTAATTTTTTCTTCAAGCTGAGTCTAGGCCAGTGTTAGCCCCAATTTCCATTGCCCCAATCTCCAATGGAAGGATGGAACAATTTCCATTGCAGCAATCTCCAATGGAAGAATGGATCTCCAGTGGAATAACGATTTGCTATGCCCAACTGTGTAGCTCAACTTTAGGATCCTGTCAACAGGACTATATAGACCTGTGTAGCCCTAACTGTACGGTGCTCCTGTCAATATTGTGTAGCCAAACTGTCAACATTGTGTAGCCCAACTGTACGATCCTGTCAACTGTGTAGACCAATTGTAGGATTCTGTCAACAGGACTGTGTAGCCCAACTATATGATCCTTTTGTGTAGCCCCTTTGTAGCTTTAACTGTAGGATCCTTTCCACAGGACTGTGTAGCCCAACTGTAGGATCCTCTTTTGTAGCCCTGTCTAGCCAACTGTAGGATCATGTCAACAGGACTCTGTAGCCCAACTGTCCTGTCAATAGGTCTGTGTTGCCTAACTGTAGGATCCTGTCAACAGGGCAGGAATTGGAATTTTTTTATTACTTTGTTCACCTTTTTTTGTTAATCTCTGCACATCGAAGAAATTACCTACTGCAATATTGGATTTATGAATT-CTTTT-------AGTTTCAGTGATATATTCCATTAATAATTGCAATATTGGACTTGTGAATTCTTTTAGTTTCAGTGATATATATCATTCATGATTGCAATATTGGATTTATGAATTCTTTTAGTTTCAGTGATATAGTCCATTCATAATTGCCTGATTGATCTGT-----------------------------------------GAGCAGAGAAATAGCGTCTGGAACAATTGCAGATCCTGGGTCAGTGAAAGCCAATGACAAGACGGGCATGATCATTCCAGTGACAGTGCCTTACGACTTTTTGCTGAATATCATGAAAGACGTTGGAAGGGATTGGGATATNGACtatacatg Pinus_ayacahuite_12S1 AATTTCTTTATTAATTTTTTCTTCAAGCTGAGTCTAGGCCAGTGTTAGCCCCAATTTCCATTGCCCCAATCTCCAATGGAAGGATGGAACAATTTCCATTGCAGCAATCTCCAATGGAAGAATGGATCTCCAGTGGAATAACGATTTGCTATGCCCAACTGTGTAGCTCAACTTTAGGATCCTGTCAACAGGACTATATAGACCTGTGTAGCCCTAACTGTACGGTGCTCCTGTCAATATTGTGTAGCCAAACTGTCAACATTGTGTAGCCCAACTGTACGATCCTGTCAACTGTGTAGACCAATTGTAGGATTCTGTCAACAGGACTGTGTAGCCCAACTATATGATCCTTTTGTGTAGCCCCTTTGTAGCTTTAACTGTAGGATCCTTTCCACAGGACTGTGTAGCCCAACTGTAGGATCCTCTTTTGTAGCCCTGTCTAGCCAACTGTAGGATCATGTCAACAGGACTCTGTAGCCCAACTGTCCTGTCAATAGGTCTGTGTTGCCTAACTGTAGGATCCTGTCAACAGGGCAGGAATTGGAATTTTTTTATTACTTTGTTCACCTTTTTTTGTTAATCTCTGCACATCGAAGAAATTACCTACTGCAATATTGGATTTATGAATT-CTTTT-------AGTTTCAGTGATATATTCCATTAATAATTGCAATATTGGACTTGTGAATTCTTTTAGTTTCAGTGATATATATCATTCATGATTGCAATATTGGATTTATGAATTCTTTTAGTTTCAGTGATATAGTCCATTCATAATTGCCTGATTGATCTGT-----------------------------------------GAGCAGAGAAATAGCGTCTGGAACAATTGCAGATCCTGGGTCAGTGAAAGCCAATGACAAGACGGGCATGATCATTCCAGTGACAGTGCCTTACGACTTTTTGCTGAATATCATGAAAGACGTTGGAAGGGATTGGGATATNGACNNNNNNNN Pinus_ayacahuite_09S1 AATTTCTTTATTAATTTTTTCTTCAAGCTGAGTCTAGGCCAGTGTTAGCCCcAATTTCCATTGCCCCAATCTCCAATGGAAGGATGGAACAATTTCCATTGCAGCAATCTCCAATGGAAGAATGGATCTCCAGTGGAATAACGATTTGCTATGCCCAACTGTGTAGCTCAACTTTAGGATCCTGTCAACAGGACTATATAGACCTGTGTAGCCCTAACTGTACGGTGCTCCTGTCAATATTGTGTAGCCAAACTGTCAACATTGTGTAGCCCAACTGTACGATCCTGTCAACTGTGTAGACCAATTGTAGGATTCTGTCAACAGGACTGTGTAGCCCAACTATATGATCCTTTTGTGTAGCCCCTTTGTAGCTTTAACTGTAGGATCCTTTCCACAGGACTGTGTAGCCCAACTGTAGGATCCTCTTTTGTAGCCCTGTCTAGCCAACTGTAGGATCATGTCAACAGGACTCTGTAGCCCAACTGTCCTGTCAATAGGTCTGTGTTGCCTAACTGTAGGATCCTGTCAACAGGGCAGGAATTGGAATTTTTTTATTACTTTGTTCACCTTTTTTTGTTAATCTCTGCACATCGAAGAAATTACCTACTGCAATATTGGATTTATGAATT-CTTTT-------AGTTTCAGTGATATATTCCATTAATAATTGCAATATTGGACTTGTGAATTCTTTTAGTTTCAGTGATATATATCATTCATGATTGCAATATTGGATTTATGAATTCTTTTAGTTTCAGTGATATAGTCCATTCATAATTGCCTGATTGATCTGT-----------------------------------------GAGCAGAGAAATAGCGTCTGGAACAATTGCAGATCCTGGGTCAGTGAAAGCCAATGACAAGACGGGCATGATCATTCCAGTGACAGTGCCTTACGACTTTTTGCTGAATATCATGAAAGACGTTGGAAGGGATTGGGATATNGACTAtacatg Pinus_ayacahuite_04S2 NATTTCTTTATTAATTTTTTCTTCAAGCTGAGTCTAGGCCAGTGTTAGCCCCAATTTCCATTGCCCCAATCTTCAATGGAAGGATGGAACAATTTCCATTGCCGCAATCTCCAATGGAAGAATGGATCTCCAGTGGAATAACGATTTGCTATGCCCAACTGTGTAGCTCAACTTTAGGATCCTGTCAACAGGACTATATAGACCTGTGTAGCCCTAACTGTACGGTGCTCCTGTCAATATTGTGTAGCCAAACTGTCAACATTGTGTAGCCCAACTGTACGATCCTGTCAACTGTGTAGACCAATTGTAGGATTCTGTCAACAGGACTGTGTAGCCCAACTGTATGATCCTTTTGTGTAGCCCCTTTGTAGCTTTAACTGTAGGATCCTTTCCACAGGACTGTGTAGCCCAACTGTAGGATCCTCTTTTGTAGCCCTGTCTAGCCAACTGTAGGATCATGTCAACAGGACTCTGTAGCCCAACTGTCCTGTCAATAGGTCTGTGTTGCCTAACTGTAGGATCCTGTCAACAGGGCAGGAATTGGAATTTTTTTATTACTTTGTTCACCTTTTTTTGTTAATCTCTGCACATCGAAGAAATTACCTACTGCAATATTGGATTTATGAATT-CTTTT-------AGTTTCAGTGATATATTCCATTAATAATTGCAATATTGGACTTGTGAATTCTTTTAGTTTCAGTGATATATATCATTCATGATTGCAATATTGGATTTATGAATTCTTTTAGTTTCAGTGATATAGTCCATTCATAATTGCCTGATTGATCTGT-----------------------------------------GAGCAGAGAAATAGCGTCTGGAACAATTGCAGATCCTGGGTCAGTGAAAGCCAATGACAAGACGGGCATGATCATTCCAGTGACAGTGCCTTACGACTTTTTGCTGAATATCATGAAAGACGTTGGAAGGGATTGGGATATNGACTATacATN Pinus_ayacahuite_03S2 NATTTCTTTATTAATTTTTTCTTCAAGCTGAGTCTAGGCCAGTGTTAGCCCCAATTTCCATTGCCCCAATCTCCAATGGAAGGATGGAACAATTTCCATTGCAGCAATCTCCAATGGAAGAATGGATCTCCAGTGGAATAACGATTTGCTATGCCCAACTGTGTAGCTCAACTTTAGGATCCTGTCAACAGGACTATATAGACCTGTGTAGCCCTAACTGTACGGTGCTCCTGTCAATATTGTGTAGCCAAACTGTCAACATTGTGTAGCCCAACTGTACGATCCTGTCAACTGTGTAGACCAATTGTAGGATTCTGTCAACAGGACTGTGTAGCCCAACTATATGATCCTTTTGTGTAGCCCCTTTGTAGCTTTAACTGTAGGATCCTTTCCACAGGACTGTGTAGCCCAACTGTAGGATCCTCTTTTGTAGCCCTGTCTAGCCAACTGTAGGATCATGTCAACAGGACTCTGTAGCCCAACTGTCCTGTCAATAGGTCTGTGTTGCCTAACTGTAGGATCCTGTCAACAGGGCAGGAATTGGAATTTTTTTATTACTTTGTTCACCTTTTTTTGTTAATCTCTGCACATCGAAGAAATTACCTACTGCAATATTGGATTTATGAATT-CTTTT-------AGTTTCAGTGATATATTCCATTAATAATTGCAATATTGGACTTGTGAATTCTTTTAGTTTCAGTGATATATATCATTCATGATTGCAATATTGGATTTATGAATTCTTTTAGTTTCAGTGATATAGTCCATTCATAATTGCCTGATTGATCTGT-----------------------------------------GAGCAGAGAAATAGCGTCTGGAACAATTGCAGATCCTGGGTCAGTGAAAGCCAATGACAAGACGGGCATGATCATTCCAGTGACAGTGCCTTACGACTTTTTGCTGAATATCATGAAAGACGTTGGAAGGGATTGGGATATNGACTAtacAtN Pinus_ayacahuite_01S1 AATTTCTTTATTAATTTTTTCTTCAAGCTGAGTCTAGGCCAGTGTTAGCCCCAATTTCCATTGCCCCAATCTCCAATGGAAGGATGGAACAATTTCCATTGCCGCAATCTCCAATGGAAGAATGGATCTCCAGTGGAATAACGATTTGCTATGCCCAACTGTGTAGCTCAACTTTAGGATCCTGTCAACAGGACTATATAGACCTGTGTAGCCCTAACTGTACGGTGCTCCTGTCAATATTGTGTAGCCAAACTGTCAACATTGTGTAGCCCAACTGTACGATCCTGTCAACTGTGTAGACCAATTGTAGGATTCTGTCAACAGGACTGTGTAGCCCAACTGTATGATCCTTTTGTGTAGCCCCTTTGTAGCTTTAACTGTAGGATCCTTTCCACAGGACTGTGTAGCCCAACTGTAGGATCCTCTTTTGTAGCCCTGTCTAGCCAACTGTAGGATCATGTCAACAGGACTCTGTAGCCCAACTGTCCTGTCAATAGGTCTGTGTTGCCTAACTGTAGGATCCTGTCAACAGGGCAGGAATTGGAATTTTTTTATTACTTTGTTCACCTTTTTTTGTTAATCTCTGCACATCGAAGAAATTACCTACTGCAATATTGGATTTATGAATT-CTTTT-------AGTTTCAGTGATATATTCCATTAATAATTGCAATATTGGACTTGTGAATTCTTTTAGTTTCAGTGATATATATCATTCATGATTGCAATATTGGATTTATGAATTCTTTTAGTTTCAGTGATATAGTCCATTCATAATTGCCTGATTGATCTGT-----------------------------------------GAGCAGAGAAATAGCGTCTGGAACAATTGCAGATCCTGGGTCAGTGAAAGCCAATGACAAGACGGGCATGATCATTCCAGTGACAGTGCCTTACGACTTTTTGCTGAATATCATGAAAGACGTTGGAAGGGATTGGNNNNNNNNNNNNNNNNN Pinus_strobus_26N AATTTCTTTATTACTCTTTTCTTCAAGCTGAGTCTAGGCCATTGTTAGCCCCAATTTCCATTGCCCCAATCTCCAATGGAAGGATGGAACAATTTCCATTGCCGCAATCTCCAATGGAAGAATGGATCTCCAGTGGAAGAACGATTTGCTATGCCCAACTGTGTAGCTCAACTTTAGGATCCTGTCAACAGGACTATATAGCCTTGTGTAGCCCTAACTGTACGGTGCTCCTGTCAATATTGTGTAGCCAAACTGTCAACATTGTGTAGCCCAACTGT-----------------------------------------------------------------ATGATCCTTTTGTGTAGACCCTTTGTAGCCC-AACTGTAGGATCCTTTCCACAGGACTGTGTAGCCCAACTGTAGGATCCTCTTTTGTAGCCCTGTGTAGCCA-CTGTAGGATCATGTCAACAGGACTGTGTAGCCCAACTGTCCTGTCAATAGGTCTGTGTTGCCTAACTGTAGGATCCTGTCAACAAGGCAGGAATTGGAATTTCTTTATTACTTTGTTCACCTTTTTTTGTTAATCTCTGCACATCGAAGAAATTACCTACTGCAATATTGGATTTATGAATT-CTTTT-------AGTTTCAGTGATATATTCCATTCATAATTGCAATATTGGACTCGTGAATTCTTTTAGTCTCAGTAATATATTCCATTCATAATTGCAATATTGGATTTATGAATTCTTTTAGTTTCAGTGATATATTCCATTCATAATTGCCTGATTGATCTGT-----------------------------------------GAGCAGAGAAATAGCGTCTGGAACAATTGCAGATCCTGGGTCAGTGAAAGCCAATGACAAGACGGGCATGATCATTCCAGTGACAGTGCCTTACGACTTTTTGCTGAACATCATGAAAGACGTTGGAAGAGATTGGGATATTGACTATACATG Pinus_strobus_22S3 AATTTCTTTATTACTCTTTTCTTCAAGCTGAGTCTAGGCCATTGTTAGCCCCAATTTCCATTGCCCCAATCTCCAATGGAAGGATGGAACAATTTCCATTGCCGCAATCTCCAATGGAAGAATGGATCTCCAGTGGAAGAACGATTTGCTATGCCCAACTGTGTAGCTCAACTTTAGGATCCTGTCAACAGGACTATATAGCCTTGTGTAGCCCTAACTGTACGGTGCTCCTGTCAATATTGTGTAGCCAAACTGTCAACATTGTGTAGCCCAACTGT-----------------------------------------------------------------ATGATCCTTTTGTGTAGCCCCTTTGTAGCCC-AACTGTAGGATCCTTTCCACAGGACTGTGTAGCCCAACTGTAGGATCCTCTTTTGTAGCCCTGTGTAGCCAACTGTAGGATCATGTCAACAGGACTGTGTAGCCCAACTGTCCTGTCAATAGGTCTGTGTTGCCTAACTGTAGGATCCTGTCAACAAGGCAGGAATTGGAATTTCTTTATTACTTTGTTCACCTTTTTTTGTTAATCTCTGCACATCGAAGAAATTACCTACTGCAATATTGGATTTATGAATT-CTTTT-------AGTTTCAGTGATATATTCCATTCATAATTGCAATATtGGACTCGTGAATTCTTTTAGTTTCAGTAATATATTCCATTCATAATTGCAATATTGGATTTATGAATTCTTTTAGTTTCAGTGATATATTCCATTCATAATTGCCTGATTGATCTGT-----------------------------------------GAGCAGAGAAATAGCGTCTGGAACAATTGCAGATCCTGGGTCAGTGAAAGCCAATGACAAGACGGGCATGATCATTCCAGTGACAGTGCCTTACGACTTTTTGCTGAATATCATGAAAGACGTTGGAAGGGATTGGGATATtGNNNNNNNNNN Pinus_strobus_11S2 AATTTCTTTATTACTCTTTTCTTCAAGCTGAGTCTAGGCCATTGTTAGCCCCAATTTCCATTGCCCCAATCTCCAATGGAAGGATGGAACAATTTCCCTTGCCGCAATCTCCAATGGAAGAATGGATCTCCAGTGGAAGAACGATTTGCTATGCCCAACTGTGTAGCTCAACTTTAGGATCCTGTCAACAGGACTATATAGCCTTGTGTAGCCCTAACTGTACGGTGCTCCTGTCAATATTGTGTAGCCAAACTGTCAACATTGTGTAGCCCAACTGT-----------------------------------------------------------------ATGATCCTTTTGTGTAGCCCCTTTGTAGCCC-AACTGTAGGATCCTTTCCACAGGACTGTGTAGCCCAACTGTAGGATCCTCTTTTGTAGCCCTGTGTAGCCAACTGTAGGATCATGTCAACAGGACTGTGTAGCCCAACTGTCCTGTCAATAGGTCTGTGTTGCCTAACTGTAGGATCCTGTCAACAAGGCAGGAATTGGAATTTCTTTATTACTTTGTTCACCTTTTTTTGTTAATCTCTGCACATCGAAGAAATTACCTACTGCAATATTGGATTTATGAATT-CTTTT-------AGTTTCAGTGATATATTCCATTCATAATTGCAATATTGGACTCGTGAATTCTTTTAGTTTCAGTAATATATTCCATTCATAATTGCAATATTGGATTTATGAATTCTTTTAGTTTCAGTGATATATTCCATTCATAATTGCCTGATTGATCTGT-----------------------------------------GAGCAGAGAAATAGCGTCTGGAACAATTGCAGATCCTGGGTCAGTGAAAGCCAATGACAAGACGGGCATGATCATTCCAGTGACAGTGCCTTACGACTTTTTGCTGAATATCATGAAAGACGTTGGAAGGGATTGGGATATTGACTATACATG Pinus_strobus_05S1 NNNNNNNNTATTACTCTTTTCTTCAAGCTGAGTCTAGGCCATTGTTAGCCCCAATTTCCATTGCCCCAATCTCCAATGGAAGGATGGAACAATTTCCATTGCCGCAATCTCCAATGGAAGAATGGATCTCCAGTGGAAGAACGATTTGCTATGCCCAACTGTGTAGCTCAACTTTAGGATCCTGTCAACAGGACTATATAGCCTTGTGTAGCCCTAACTGTACGGTGCTCCTGTCAATATTGTGTAGCCAAACTGTCAACATTGTGTAGCCCAACTGT-----------------------------------------------------------------ATGATCCTTTTGTGTAGCCCCTTTGTAGCCC-AACTGTAGGATCCTTTCCACAGGACTGTGTAGCCCAACTGTAGGATCCTCTTTTGTAGCCCTGTGTAGCCAACTGTAGGATCATGTCAACAGGACTGTGTAGCCCAACTGTCCTGTCAATAGGTCTGTGTTGCCTAACTGTAGGATCCTGTCAACAAGGCAGGAATTGGAATTTCTTTATTACTTTGTTCACCTTTTTTTGTTAATCTCTGCACATCGAAGAAATTACCTACTGCAATATTGGATTTATGAATT-CTTTT-------AGTTTCAGTGATATATTCCATTCATAATTGCAATATTGGACTCGTGAATTCTTTTAGTTTCAGTAATATATTCCATTCATAATTGCAATATTGGATTTATGAATTCTTTTAGTTTCAGTGATATATTCCATTCATAATTGCCTGATTGATCTGT-----------------------------------------GAGCAGAGAAATAGCGTCTGGAACAATTGCAGATCCTGGGTCAGTGAAAGCCAATGACAAGACGGGCATGATCATTCCAGTGACAGTGCCTTACGACTTTTTGCTGAATATCATGAAAGACGTTGGAAGGGATTGGGATATTGACTATACATG Pinus_strobus_04S1 AATTTCTTTATTACTCTTTTCTTCAAGCTGAGTCTAGGCCATTGTTAGCCCCAATTTCCATTGCCCCAATCTCCAATGGAAGGATGGAACAATTTCCATTGCCGCAATCTCCAATGGAAGAATGGATCTCCAGTGGAAGAACGATTTGCTATGCCCAACTGTGTAGCTCAACTTTAGGATCCTGTCAACAGGACTATATAGCCTTGTGTAGC-----------------CCTGTCAATATTGTGTAGCCAAACTGTCAACATTGTGTAGCCCAACTGT-----------------------------------------------------------------ATGATCCTTTTGTGTAGCCCCTTTGTAGCTTTAACTGTAGGATCCTTTCCACAGGACTGTGTAGCCCAACTGTAGGATCCTCTTTTGTAGGACTGTGTAGCCAACTGTAGGATCATGTCAACAGGACTGTGTAGCCCAACTGTCCTGTCAATAGGTCTGTGTTGCCTAACTGTAGGATCCTGTCAACAAGGCAGGAATTGGAATTTCTTTATTACTTTGTTCACCTTTTTTTGTTAATCTCTGCACATCGA-GAAATTACCTACTGCAATATTGGATTTATGAATT-CTTTT-------AGTTTCAGTGATATATTCCATTCATAATTGCAATATTGGACTTGTGAATTCTTTTAGTTTCAGTAATATATTCCATTCATAATTGCAATATTGGATTTATGAATTCTTTTAGTTTCAGTGATATATTCCATTCATAATTGCCTGATTGATCTGT-----------------------------------------GAGCAGAGAAATAGCGTCTGGAACAATTGCAGATCCTGGGTCAGTGAAAGCCAATGACAAGACGGGCATGATCATTCCAGTGACAGTGCCTTACGACTTTTTGCTGAATATCATGAAAGACGTTGGAAGGGATTGGGATATTGACtatacatg Pinus_strobus_03S1 NATTTCTTTATTACTCTTTTCTTCAAGCTGAGTCTAGGCCATTGTTAGCCCCAATTTCCATTGCCCCAATCTCCAATGGAAGGATGGAACAATTTCCATTGCCGCAATCTCCAATGGAAGAATGGATCTCCAGTGGAAGAACGATTTGCTATGCCCAACTGTGTAGCTCAACTTTAGGATCCTGTCAACAGGACTATATAGCCTTGTGTAGC-----------------CCTGTCAATATTGTGTAGCCAAACTGTCAACATTGTGTAGCCCAACTGT-----------------------------------------------------------------ATGATCCTTTTGTGTAGCCCCTTTGTAGCTTTAACTGTAGGATCCTTTCCACAGGACTGTGTAGCCCAACTGTAGGATCCTCTTTTGTAGGACTGTGTAGCCAACTGTAGGATCATGTCAACAGGACTGTGTAGCCCAACTGTCCTGTCAATAGGTCTGTGTTGCCTAACTGTAGGATCCTGTCAACAAGGCAGGAATTGGAATTTCTTTATTACTTTGTTCACCTTTTTTTGTTAATCTCTGCACATCGA-GAAATTACCTACTGCAATATTGGATTTATGAATT-CTTTT-------AGTTTCAGTGATATATTCCATTCATAATTGCAATATTGGACTTGTGAATTCTTTTAGTTTCAGTAATATATTCCATTCATAATTGCAATATTGGATTTATGAATTCTTTTAGTTTCAGTGATATATTCCATTCATAATTGCCTGATTGATCTGT-----------------------------------------GAGCAGAGAAATAGCGTCTGGAACAATTGCAGATCCTGGGTCAGTGAAAGCCAATGACAAGACGGGCATGATCATTCCAGTGACAGTGCCTTACGACTTTTTGCTGAATATCATGAAAGACGTTGGAAGGGATTGGGATATTGACTATACATG Pinus_strobus_02S1 NATTTCTTTATTACTCTTTTCTTCAAGCTGAGTCTAGGCCATTGTTAGCCCCAATTTCCATTGCCCCAATCTCCAATGGAAGGATGGAACAATTTCCCTTGCCGCAATCTCCAATGGAAGAATGGATCTCCAGTGGAAGAACGATTTGCTATGCCCAACTGTGTAGCTCAACTTTAGGATCCTGTCAACAGGACTATATAGCCTTGTGTAGCCCTAACTGTACGGTGCTCCTGTCAATATTGTGTAGCCAAACTGTCAACATTGTGTAGCCCAACTGT-----------------------------------------------------------------ATGATCCTTTTGTGTAGACCCTTTGTAGCCC-AACTGTAGGATCCTTTCCACAGGACTGTGTAGCCCAACTGTAGGATCCTCTTTTGTAGCCCTGTGTAGCCAACTGTAGGATCATGTCAACAGGACTGTGTAGCCCAACTGTCCTGTCAATAGGTCTGTGTTGCCTAACTGTAGGATCCTGTCAACAAGGCAGGAATTGGAATTTCTTTATTACTTTGTTCACCTTTTTTTGTTAATCTCTGCACATCGAAGAAATTACCTACTGCAATATTGGATTTATGAATT-CTTTT-------AGTTTCAGTGATATATTCCATTCATAATTGCAATATTGGACTCGTGAATTCTTTTAGTTTCAGTAATATATTCCATTCATAATTGCAATATTGGATTTATGAATTCTTTTAGTTTCAGTGATATATTCCATTCATAATTGCCTGATTGATCTGT-----------------------------------------GAGCAGAGAAATAGCGTCTGGAACAATTGCAGATCCTGGGTCAGTGAAAGCCAATGACAAGACGGGCATGATCATTCCAGTGACAGTGCCTTACGACTTTTTGCTGAATATCATGAAAGACGTTGGAAGGGATTGGGATATTGACTATACATG ; END; BEGIN CODONS; CODONPOSSET * CodonPositions = N: 1 - 990 ; CODESET * UNTITLED = Universal: all ; END; BEGIN ASSUMPTIONS; OPTIONS DEFTYPE = unord PolyTcount = MINSTEPS ; END;