NEXUS [File created by TreeBASE: 7/26/07 21:15:42] [Matrix accession#: M2995] BEGIN TAXA; TITLE M2995; DIMENSIONS NTAX=23; TAXLABELS Ponera_striata Isochilus_linearis Hexalectris_revoluta Hexalectris_grandiflora Helleriella_guerrerensis Chysis_bractescens Bletia_urbana Bletia_reflexa Bletia_purpurea Bletia_purpurata Bletia_punctata Bletia_parkinsonii Bletia_neglecta Bletia_machristmochila Bletia_lilacina Bletia_jucunda Bletia_gracillis Bletia_coccinea Bletia_catenulata Bletia_campanulata Bletia_adenocarpa Basiphyllaea_hamiltonii Basiphyllaea_carabiaiana ; END; BEGIN CHARACTERS; TITLE M2995; DIMENSIONS NCHAR=721; FORMAT DATATYPE = DNA MISSING = ? GAP = - ; MATRIX Ponera_striata TCGAGACCGAGATGCAATATCGAGCGATTCGGAGAACCCGTGAATGAGCGA---CGGCCGCCGCCGTCGC-GGAACAGCCGTCCCGGCCGT-GGCCTCACCTCCC-----ATCGGTGGCGGCGGG------CCGCGATGCAGGGCGGATGAGA-ACTCAAA-CCGGCG-CAGCTACGCGCCAAGGGA--ATATCGA-AATTCACGAGCCCGGCGTCGGG-CCTCGTGGCGTGGGGTGCTGTTGCACGCCATATGGATGGATCGACACGACTCTCGGCAATGGATATCTCGGCTCTCGCATCGATGAAGAGCGCAGCGAAATGCGATACGTGGTGCGAATTGCAGAATCCCGCGAACCATCGAGAATTTGAACGCAAGTTGCGCCCGAGGCCAGCCGGCCAAGGGCACGTCCGCCTGGGCGTCAAGCGTCGCGTCGCTCCGTGCCAGC--TCCATCC-----CGCCCT-----GACGGGTGCGTCGGCCGAGGCCCGGACGTGCAGAGTGGCCCGTCGTGCCCGCGGGCGCGGCGGGCTGAAGAGCGGGGGTCGTCGTCTCATCATCGGCCGCGAGCAACCAGGGGTGGATGCGCCATGCGGAGCTGTGCCTGCGTTGCG--TCGTCATGGCC---CGAGGAAAGATCGTACCCCCCACAGGCAGGCGATCCCAACCCCCATGCGCCGA-----TCC--ACT----GGCGGCGGCTTGGAAT Isochilus_linearis TCAAGAC-GA--TAAA-T-TCGAGCGATTCGGAAAACCCGTGAATGAAGC----CAGGGAGAGCGGCCCCTGGGAAAACCAGTCCGGTAGG-GGCTTTTTTTCCCCCAGGAGGGAGGGGGAGGGGCGGA--CCACGGCGAAGGGCGGTTGAAA-ACTCAAA-CCGGCG-CAGCCACGCGCCAAGGGA--ATATCGAGGA--CACGAGCCCTGCATCGGG-TTTCGTGGCGTGGGGTGCTGTTGCACGCCATATGGTT----CGACACGACTCTCGGCAATGGATATCTCGGCTCTCGCATCGAT---------AGCGAAATGCGATACATGGTGCGAATTGCAGAATCCCGCGAACCATCGAGAATTTGAACGCAAGTTGCGCCCGAGGCCAGCCGGCCAAGGGCACGTCCGCCTGGGCGTCAAGCGTTGCGTCGCTCCGTGCCAGC--TCAGTCC-----CACCC------CACGGGTGTGTCGGCCGAGGCCCGGACGTGCAGAGTGGCCCGTCGTGCCCGTCGGTGCGGCGGGCTGAAGAGTGGGTC--GTCATCTCATCACCGGCCGCGAGCAACTAGGGGTGGATG--CCATGCAAAGCTGTGCCTACGTTGTGCTTCGCGATGGCC---TGAGAATAGATTGCA--CCTTCCCGGCGA----TCCCGACCC--ATGCGCCGA-----TCCGAACC----GGCGGCGGCTTGGAAT Hexalectris_revoluta TCGAGACCGAAATAAAACATCGAGCGACTCGGAGAACCCGTGCATCGGCGAAGGCGGCCGCTGCCGCCGC-GCAGCATCCGTCCCGGTCGC-GGCCTCATCCCCC----CAACGG-GGGGGG---------CCACGATGAGG--CGGATGAGACACTCACA-CCGGCG-CAGCCACGCGCCAAGGGA-GATATCGAGA-AACCCGAGCCC-GCGTCGGG-CTCTGTGGCCGGGCGTGCCGTCGCACGCCGTAGGGAT----CGACACGACTCTCGGCAATGGATATCTCGGCTCTCGCATCGATGAAGAGCGCAGCGAAATGCGATACGTGGTGCGAATTGCAGAATCCCGCGAACCATCGAGAATTTGAACGCAAGTTGCGCCCGAGGCCAGCCGGCCGAGGGCACGTCCGCCTGGGCGTCAAGCGTTGCGTCGCTCCGCGCCAGC--TCCATCT-----CGCCA-----CGATGGGCGTGTCGGGCGAGGCTCGGACGTGCAGAGTGGCCCGTCGTGCCCGCCGGCGCGGCGGGCTGAAGAGCGGGTG--ATCGTCTCATTGTG-CCGACGGACAACAATGGGTGGATG---------GAACGAGGCCTGCGTTGTG--CCGTGCTGGCC---CGAGAAAAGATCACG-GCCCCCGAGGCGAGAGATCCCAGCCC--ATGCGCCGACGGCATCC--ACC----GGTGGCGGCTTGGAAT Hexalectris_grandiflora TCGAGACCGAAATAAAACACCGAGCGATTCGGAGAACCCGTGCATCGGCGAAGGCGGCGGCCGCCGCCGC-GCAGCATCCGTCCCGGTCGC-GGCCTCATCCCCCC---ACCGGG-GGGCGG---------CCACGATGGAGGACGGATGAGACACTCAAA-CCGGCG-CAGCCACGCGCCAAGGGAAAATATCGAGAAAACACGAGCCCCGCGTCGGG-CTCGGTGGCCCGGCGTGCCGTCGCACGCCATAGGGAT----CGACACGACTCTCGGCAATGGATATCTCGGCTCTCGCTCCGATGAAGAACGCAGCGAAATGCGATACGTGGTGCGAATTGCAGAATCCCGCGAACCATCGAGAATTTGAACGCAAGTTGCGCCCGAGGCCAGCCGGCCAAGGGCACGTCCGCCTGGGCGTCAAGCGTTGCGTCGCTCCGTGCCAGC--TCCATCC-----CGCCC------GATGGGCGTG-CGGGGGAGGCTCGGACGTGCAGAGTGGCCCGTCGTGCCCTCCGGCGCGGCGGGCTGAAGAGCGGGTG--ATCGTCTCATTGCGC-CCACGGACGACAAGGGGTGGATG---------GAACGAGGCCTGCGTTGTG--TCGTGCTGGCC---CGAGAAAAGATCACG-GCCCCCGAGGCGAGAGATCCCAGCCC--ATGCGCCGACGGCATCC--ACC----GGCGGCGGCTTGGAAT Helleriella_guerrerensis TCGAGACCGAAATAA--TATCGAGCGATTCGGAGAACCCGTGAATGAGCGA---CGGCGGCAGTCGTCGC-GGAACAGCCGTCCCAGTCGT-GGCCTCATCTCCC-ATCGGGGGGTGGGGGG-------AACCACGATGAAGGGCGGATGAAA-ACTCAAA-CCGGCG-CAGTCACGCGCCAAGGGAATAT---GGAAAAACATGAGCCCTGCATCGGG-TTTCGTGGCGTGGGGTGCTGTTGCACGCCATATGGAT----CGACACGACTCTCGGCAATGGATATCTCGGCTCTCGCATCGATGAAGAGCGCAGCGAAATGCGATACGTGGTGCGAATTGCAGAATCCCGCGAACCATCGAGAATTTGAACGCAAGTTGCGCCCGAGGCCAGCCGGCCAAGGGCACGTCCGCCTGGGCGTCAAGCGTTGCGTCGCTCCGTGCCAGC--TCCATGC----CCACCT------AACGGGCGTGTCGGTCGAGGCTCGGACGTGCAGAGTGGCCCGTCGTGCCCGTCGGTGCGGCGGGCTGAAGAGTGGGTGTCATCATCTCATCATCGGCCGCGAACAACTAGGGGTGGATGCGCCATGCAAAGCTGTGCCTACGTTGTA--TCGTGATGGCC---TGAGAAAAGACTATA--CCCTCCAGGCGA----TCCCAACCC--ATGCGC-GTCG--ATCC--ACT----GGCGGCGGGTTGGAAT Chysis_bractescens TCGAGACCCAAATA---TATCGAGCGATTCGGAGAACCCGTGAATGAGCGG---CGGCAGCTGCCGTCGC-GAAATTGCCGTCCCAGCCGT-GGCCTCGTC-------AGAGAGGTGGGGGGG--------CCACGAGGAAGGACGGATGAAACTC--AAA-CCGGCG-CAGCTACGCGCCAAGGGA--ATATCGAAAAA-CACGAGCCCTGTATCGGG-TTTAGTGGCGTGGAGTGCG-TCGCACACCACACGGAT----CGACACGACTCTCGGCAATGGATATCTCGGCTCTCGCATCGATGAAGAGCGCAGCGAAATGCGATACGTGGTGCGAATTGCAGAATCCCGCGAACCATCGAGAATTTGAACGCAAGTTGCGCCCGAGGCCAGCCGGCCAAGGGCACGTCCGCCTGGGCGTCAAGCGTTGCGTCGCTCCGTGCCAAC--TCCATCC-----CATCC------GATGGGTGTGTCGGTCGAGGCTCGGACGTGCAGAGTGGCTCGTCGTGCCCGTCGGTGCGGCGGGCTGAAGAGGGGGTC--GTCGTCTCATCGGC---CACGAACAACAAGGGGTGGATGAGAGCTGT-GAGCAAGGCCTACGTTGTC--TCGTGCCGGCC---TGAGAAAAGATTATA--CTCCCGT-TTGA----TCCCAACCC--ATGCGCC--CGG--TCC--ACG----GACGGCGGCTTGGAAT Bletia_urbana TCGAGACCGAAATAA--TATCGAGCGATTCGGAGAACCCGTGCATCAGCGA---CGGCGGCAGCCGTCGC-GTAGCATCCGCCCCAGTCGT-GGCCTCGTCCCGA----CCGGGATGG-------------CCACGATGAAGGACGGATGAAACACTCAAA-CCGGCG-CAGCCACGCGCCAAGGGAAAATATCGAAAAAACACGAGCCCCACGCCGGG-CTCAGTGGCGTGGCGTGCCGTTGCACGCCACAGGGAT----CGAAACGACTCTCGGCAATGGATATCTCGGCTCTCGCATCGATGAAGAGCGCAGCGAAATGCGATACGTGGTGCGAATTGCAGAATCCCGCGAACCATCGAGAATTTGAACGCAAGTTGCGCCCGAGGCCAGCCGGCCAAGGGCACGTCCGCCTGGGCGTCAAGCGTTGCGTCGCTCCGTGCCAAC--TCCATCC-----CACCC------AACGGGTGTGTCGGGCGAGGCTCGGACGTGCAGAGTGGCCCGTCGTGCCCGCCGGCACGGCGGGCTGAAGAGTGGGTG--ATCTTCTCATTGC---CCGCGAACAACAAGGGGTGGATG---------GAACGCGGCCTACGTTGTG--TCGTGCTGGCC---TGAGAGAGGATCGCA--CCTCCGAGGTGA----TCCCAACCC--ATGCGCCGA-----TCC--ACC----GACGGCGGCTTGGAAT Bletia_reflexa TCGAGAC-GAAATGA--TATCGAGCGATTCGGAGATCCCGTGCATCAGCGG---CGGCGGCTGCCGTCGC-GTAGCGTCCGCCCCAGTCGT-GGCCTCGTCCCC-------AGAATGAGGG----------GCACGATGAAGGACGGATGAAACACTCAAA-CCGGCG-CAGTCACGCGCCAAGGGAAAATATCGAGAAAACACGGGGCCC-CACCGGG-CTCGGTGGCGTGGCGTGCCGTTGCACGCCGTAAGGAT----CGACACGACTCTCGGCAATGGATATCTCGGCTCTCGCATCGATGAAAAGCGCAGCGAAATGCGATACGTGGTGCGAATTGCAGAATCCCGCGAACCATCGAAAATTTGAACGCAAGTTGCGCCCGAGGCCAGCCGGCCAAGGGCACGTCCGCCTGGGCGTCAAGCGTTGCGTCGCTCCGTGCCAGC--TCCATCC-----CACCC------AACGGGTGTGTCGGGCGAGGCTCGGACGTGCAGAGTGGCTCGTCGTGCTCACCGGCACGGCGGGCTGAAGTGTGGGTG--ATCTTCTCATTTC---CCGCGAACAACAAGGGGTGGATG---------GAACGCGGCCTACGTTGTG--TCGTGCTGGCC---TGAGAGAGGATCGCA--CCTTCGAGGTGA----TCCCAACCC--ATGCGCCGA-----TCC--ACT----GATGGCGGCTTGGAAT Bletia_purpurea TCGAGACCGAAATGA--TATCGAGCGATTCGGAGAACCCGTGCATCAGCGA---CGGCGGCTGCCGTCGC-GTAGCGTCC--CCCCGTCGT-GGCCTCGTCCCC-------AGAATGAGGGG----------CACGACGAAGGACGGACGAAACACTCAAA-CCGGCG-CAGTCACGCGCCAAGGGAACATATCGAGAGAACACGGGGCCCACACCGGG-CTCGGTGGCGTGGCGTGCCGTTGCACGCCGTAAGGAT----CGACACGACTCTCGGCAATGGATATCTCGGCTCTCGCATCGATGAAGAGCGCAGCGAAATGCGATACGTGGTGCGAATTGCAGAATCCCGCGAACCATCGAGAATTTGAACGCAAGTTGCGCCCGAGGCCAGCCGGCCAAGGGCACGTCCGCCTGGGCGTCAAGCGTTGCGTCGCTCCGTGCCAGC--TCCAT-C----CCACCC------AACGGGTGTGTCGGGCGAGGCTCGGACGTGCAGAGTGGCCCGTCGTGCCCGCCGGCGCGGCGGGCTGAAGAGTGGGTG--ATCGTCTCATTGCC---CGCGAACAACGAGGGGTGGATG---------GAACGCGGCCTACGTTGTG--TCGTGCTGGCC---CGAGAAGACATTACA--CCCCCGAGGTGA----TCCCGACCC--ACGCGCCGA-----TCC--ACC----GACGGCGGCTTGGAAT Bletia_purpurata TCGAGACCGAAATAA--TATCGAGCGATTCGGAGAACCCGTGCATCAGCGA---CGGCGGCTGCCGTCGC-GTAGCATCCGTCCCGGTCGT-GGCCTCGTCCCCT----CCGGGATGGGGG-----------CACGATGAGGGACGGATGAAACACTCAAA-CCGGCG-CCGTCACGCGCCAAGGGAAAATATCGAGAAAACACGAGCCCCACACCGGG-CTCGGTGGCGTGG-----CGTTGCACGCCACGAGGAT----CGACACGACTCTCGGCAATGGATATCTCGGCTCTCGCATCGATGAAGAGCGCAGCGAAATGCGATACGTGGTGCGAATTGCAGAATCCCGCGAACCATCGAGAATTTGAACGCAAGTTGCGCCCGAGGCCAGCCGGCCAAGGGCACGTCCGCCTGGGCGTCAAGCGTTGCGTCGCTCCGTGCCAGC--TCCATCC-----CGCCC------AACGGGCGTGTCGGGCGAGGCTCGGACGTGCAGAGTGGCCCGTCGTGCCCGCGGGCGCGGCGGGCTGAAGAGTGGGTG--ATCGTCTCACTGC---CCGCGAACAACGAGGGGTGGATG---------GAACGCGGCCTGCGTTGTG--TCGTGCTGGCC---CGAGAGAAGATCACA--CCTCCGAGGTGA----TCCCGACCC--ACGCGCCGA-----TCC--ACC----GACGGCGGCTTGGAAT Bletia_punctata TTGAGACCGAAATAA--TATCGAGCGATTCGGAGAACCCGTGCATCAGCGA---CGGCGGCTGCCGTCGC-GTAGCATCCGTCCCGGTCGT-GGCCTCGTCCCCT----CCGGGATGGGGG-----------CACGATGAGGGACGGATGAAACACTCAAA-CCGGCG-CCGTCACGCGCCAAGGGAAAATATCGAGAAAACACGAGCCCCGCACCGGGTCTCGGTGGCGTGG-----CGTTGCACGTCACGAGGAT----CGACACGACTCTCGGCAATGGATATCTCGGCTCTCGCATCGATGAAGAGCGCAGCGAAATGCGATACGTGGTGCGAATTGCAGAATCCCGCGAACCATCGAGAATTTGAACGCAAGTTGCGCCCGAGGCCAGCCGGCCAAGGGCACGTCCGCCTGGGCGTCAAGCGTTGCGTCGCTCCGTGCCAGC--TCCATCC-----CGCCC------AACGGGTGTGTCGGGCGAGGCTCGGACGTGCAGAGTGGCCCGTCGTGCCCGCGGGCGCGGCGGGCTGAAGAGTGGGTG--ATCGTCTCACTGC---CCGCGAACAACGAGGGGTGGATG---------GAACGCGGCCTGCGTTGTG--TCGTGCTGGCC---CGAGAGAAGATCACA--CCTCCGAGGTGA----TCCCGACCC--ACGCGCCGA-----TCC--ACC----GACGGCGGCTTGGAAT Bletia_parkinsonii TCGAGAC-GAAATAA--TATCGAGCGATTCGGAGAACCCGTGCATCAGCG----CGGCGGCTGCCGTCGC-GTAGCATCCGTCCCGGTCGT-GGCCTCGTCCCCT----CCGGG-TGGGGG-----------CACGATGAGGGACGGATGAAACACTCAAA-CCGGCG-CCGTCACGCGCCAAGGGAAAATATCGAGAAAACACGAGCCCCGCACCGGG-CTCGGTGGCGTGG-----CGTTGCACGTCACGAGGAT----CGACACGACTCTCGGCAATGGATATCTCGGCTCTCGCATCGATGAAGAGCGCAGCGAAATGCGATACGTGGTGCGAATTGCAGAATCCCGCGAACCATCGAGAATTTGAACGCAAGTTGCGCCCGAGGCCAGCCGGCCAAGGGCACGTCCGCCTGGGCGTCAAGCGTTGCGTCGCTCCGTGCCAGC--TCCATCC-----CGCCC------AACGGGCGTGTCGGGCGAGGCTCGGACGTGCAGAGTGGCCCGTCGTGCCCGCGGGCGCGGCGGGCTGAAGAGTGGGTG--ATCGTCTCACTGCC---CGCGAACAACGAGGGGTGGATG---------GAACGCGGCCTGCGTTGTG--TCGTGCTGGCC---CGAGAGAAGATCACA--CCTCCGAGGTGA----TCCCGACCC--ACGCGCCGA-----TCC--ACC----GACGGCGGCTTGGAAT Bletia_neglecta TCGAGACCGAAATGA--TATCGAGCGATTCGGAGAACCCGTGCATCAGCGG---CGGCGGCTGCCGTCGC-GTAGCGTCCGCCCCAGTCGT-GGCCTCGTCCCCA----GAATGAGGGG-------------CACGACGAAGGACGGATGAAACACTCAAA-CCGGCG-CAGTCACGCGCCAAGGGAAAATATCGAGAAAACACGGGGCCCACACCGGG-CTCGGTGGCGTGGCGTGCCGTTGCACGCCGTAAGGAC----CGACACGACTCTCGGCAATGGATATCTCGGCTCTCGCATCGATGAAAAGCGCAGCGAAATGCGATACGTGGTGCGAATTGCAGAATCCCGCGAACCATCGAGAATTTGAACGCAAGTTGCGCCCGAGGCCAGCCGGCCAAGGGCACGTCCGCCTGGGCGTCAAGCGTTGCGTCGCTCCGTGCCAGC--TCCATCC-----CACCC------GACGGGTGTGTCGGGCGAGGCTCGGACGTGCAGAGTGGCCCGTCGTGCCCGCCGGCGCGGCGGGCTGAAGAGTGGGTG--ATCGTCTCATTGC---CCGCGAACAACAAGGGGTGGATG---------GAACGCGGCCTACGTTGTG--TCGTGCTGGCCCTAAAAAAGAATATTACC--CCCCCGAGGTGA----TCC-GACCC--ACGCGCCGA-----TCC--AAC----GACGGCGGCTTGGAAT Bletia_machristmochila TCGAGACCGAAATA---TATCGAGCGATTCGGAGAACCCGTGCATCAGCGA---CGGCGGCAGCCGTCGC-GTAGCATCCGCCCCAGTCGT-GGCCTCGTCCCGA----CCGGGATGG-------------CCACGATGAAGGACGGATGAAACACTCAAA-CCGGCG-CAGCCACGCGCCAAGGGAAAATATCGAAAAAACACGAGCCCCACGTCGGG-CTCAGTGGCGTGGCGTGCCGTTGC-CGCCTCATGGAT----CGAAACCACTCTCGGCAATGGATATCTCGGCTCTCGCATC-ATGAAGATCGCAGCGAAATGCGATACGTGGTGCCAATTGCAGAATCCCGCGAACCATCGAGAATTTGAACGCAAGTTGCGCCCGAGGCCAGCCGGCCAAGGGCACGTCCGCCTGGGCGTCAAGCGTTGCGTCGCTCCGTGCCAAC--TCCATCC-----CACCC------AACGGGTGTGTCGGGCGAGGCTCGGACGTGCAGAGTGGCCCGTCGTGCCCGCCGGCACGGCGGGCTGAAGAGTGGGTG--ATCTTCTCATTGC---CCGCGAACAACAAGGGGTGGATG---------GAACGCGGCCTACGTTGTG--TCGTGCTGGCC---TGAGAGAGGATCGCA--CCTCCGAGGTGA----TCCCAACCC--ATGCGCCGA-----TCC--ACC----GACGGCGGCTTGGAAT Bletia_lilacina TCGAGACCGAAATGA--TATTGAGCGATTCGGAGAACCCGTGCATCAGCGG---CGGCGGCTGCCGTCGC-GTAGCGTCCGCCCCAGTCGT-GGCCTCGTCCCCA----GAATGAGGGG-------------CACGATGAAGGACGGATGAAACACTCAAA-CCGGCGTCAGTCACGCGCCAAGGGAAAATATCGAGAAAACACGGGGCCCGCACCGGG-CTCGGTGGCGTGGCGTGCCGTTGCACGCCGTAAGGAT----CGACACGACTCTCGGCAATGGATATCTCGGCTCTCGCATCGATGAAGAGCGCAGCGAAATGCGATACGTGGTGCGAATTGCACAATCCCGCGAACCATCGAGAATTTGAACGCAAGTTGCGCCCGAGGCCAGCCGGCCAAGGGCACGTCCGCCTGGGCGTCAAGCGTTGCGTCGCTCCGTGCCAGC--TCCATCC-----CACCC------AACGGGTGTGTCGGGCGAGGCTCGGACGTGCAGAGTGGCCCGTCGTGCCCGCCGGCGCGGCGGGCTGAAAAGTGGGTG--ATCGTCTCATTGC---CCGCAAACAACAAGGGGTGGATG---------GAACGCGGCCTACGTTGTG--TCGTGCTGGCC---CGAGAAAAGATCACA--CCCCCGAGGTGA----TCCCGACCC--ACGCGCCGA-----TCC--ACC----GACGGCGGCTTGGAAT Bletia_jucunda TCGAGACCGAAATAA--TATCGAGCGATTCGGAGAACCCGTGCATCAGCGA---TGGCGGCTGCCGTCGC-GTAGCATCCGTCCCAGTCGT-GGCCTCGTCCCC----------ATCGGGGGG--------CCACGATGAAGGACGGATGAAACACTCAAA-CCGGCG-CAGCCACGCGCCAAGGGAAAATATCGAAAAAACACGAGCCCCACGCCGGG-CTCAGTGGCGTGGCGTGCCGTTGCACGCCACAGGGAT----CGAAACGACTCTCGGCAATGGATATCTCGGCTCTCGCATCGATGAAAAGCGCAGCGAAATGCGATACGTGGTGCGAATTGCAGAATCCCGCGAACCATCGAGAATTTGAACGCAAATTGCGCCCGAGGCCAGCCGGCCAAGGGCACGTCCGCCTGGGCGTCAAGCGTTGCGTCGCTCCGTGCCAAC--TCCAT-C----CCACCC------AACGGGTGTGTCGGGCGAGGCTCGGATGTGCAGAGTGGCCCGTCGTGCCCGCCGGCACGGCGGGCTGAAGAGTGGGTG--ATCTTCTCATTGCC---CGCGAACAACGAGGGGTGGATG---------GAACGCGGCCTACGTTGTG--TCGTGCTGGCC---TGAGAGAAGATCGCA--CCTCCGAGGTGA----TCCCAACCC--ATGCGCCGA-----TCC--ACC----GACGGCGGCTTGGAAT Bletia_gracillis TCGAGAC-GAAATAA--T-----GCGATTCGGAGAACCCGTGCATCAGCGA---TGGCGGCTGCCATCGC-GTAGCATCCGTCCCAGTCGT-GGCCTCGTCCCC----ACCGGGATGG-------------CCACGATGAAGGACGGATGAAACACTCAAA-CCGGCG-CAGCCACGCGCCAAGGGAAAATATCGAAAAAACACGAGCCCCACGCCGGG-CTCAGTGGCGTGGCGTGCCGTTGCACGCCACAGGGAT----TGAAACGACTCTCGGCAATGGATATCTCGGCTCTCGCATCGATGAAAAGCGCAGCGAAATGCGATACGTGGTGCGAATTGCAAAATCCCGCGAACCATCGAAAATTTGAACGCAAGTTGCGCCCGAGGCCAGCAGGCCAAGGGCACGTCCGCCTGGGCGTCAAGCGTTGCGTCGCTCCGTGCCAAC--TCCATCC-----CACCC------AACGGGTGTGTCGGGCGAGGCTCGGACGTGCAGAGTGGCCCGTCGTGCTCACCGGCACGGCGGGCTGAAGTGTGGGTG--ATCTTCTCATTTC---CCGCGAACAACAAGGGGTGGATG---------GAACGCGGCCTACGTTGTG--TCGTGCTGGCC---TGAGAGAGGATCGCA--CCTTCGAGGTGA----TCCCAACCC--ATGCGCCGA-----TCC--ACT----GATGGCGGCTTGGAAT Bletia_coccinea NNNNNNNNNNNNNNNN-CATCGAG-AATTCGGAGT-TCCGTGCATCAGCGA---CGGCGGCTGCCGTCGC-GTAGCATCCGTTCCAGTCGT-GGCCTCGTCCCCA----CCGGGATGG-------------CCACGATGAAGGACGGATGAAACACTCAAA-CCGGCG-CAGCCACGCGCCAAGGGAAAATATCGAAAAAACACGAGCCCCACGCCGGG-CTCAGTGGCGTGGCGTGCCGTTGCACGCCACAGGGAT----CGAAACGACTCTCGGCAATGGATATCTCGGCTCTCGCATCGATGAAGAGCGCAGCGAAATGCGATACTTGGTGCGAATTGCA-AATCCCGCGAACCATCGA-AATTTGAACGCAAGTTGCGCCCGAGGCCAGCCGGCCAAGGGCACGTCCGCCTGGGCGTCAAGCGTTGCGTCGCTCCGTGCCAAC--TCCATCC-----CACCC------AACGGGTGTGTCGGGCGAGGCTCGGACGTGCAGAGTGGCCCGTCGTGCCCGCCGGCACGGCGGGCTGAAGAGTGGGTG--ATCTTCTCATTGC---CCGCGAACAACAAGGGGTGGATG---------GAACGCGGCCTACGTTGTG--TCGTGCTGGCC---TGAGAGAGGATCGCA--CCTCCGAGGTGA----TCCCAACCC--ATGCGCCGA-----TCC--ACT----GATGGCGGCTTGGAAT Bletia_catenulata TCGAGACCGAAATAA--CATCGAGCGATTCGGAGAACCCGTGCATCACCGA---TGGCGGCTGCCGTCGC-GTAACATCCTTCCCGGCTGT-GGCCTCATCCCCC---ACCGGGCGGGGGGGG--------CCACGATGCAGGACGGATGAAACACTCAAAACCGGCG-CAGTCACGCGCCAAGGGAAAATATTGAAAAAACACGAGCCC-GCTCCGGG-CTCAGTTGCGTGGCGTGCCCTCGCACGCCACGGGGAT----CGACACGACTCTCGGCAATGGATATCTCGGCTCTCGCATCGATGAAGAGCGCAGCGAAATGCGATACGTGGTGCGAATTGCAGAATCCCGCGAACCATCGAGAATTTGAACGCAAGTTGCGCCCGAGGCCAGCCGGCCAAGGGCACGTCCGCCTGGGCGTCAAGCGTTGCGTCGCTCCGTGCCAAC--TCCATCCGCTCCCACCCCG----AATGGGTGTGTCGGGCGAGGCTCGGACGTGCAGAGTGGCCCGTCGTGCCCGCCGGCGCGGCGGGCTGAAGAGCGGGTG--ATCGTCTCGCTGCC---CGCGAGCAACAAGGGGTGGATG---------GAACGAGGCCTCCGTTGTG--TCGTGCTGGCC---CGAGAGAAGATTACACACCCCCGAGGTGA----TCCCAACCC--ATGCGCCGA-----TCC--ACC----GACGGCGGCTAGGAAT Bletia_campanulata TCGAGACCGAAATAA--TATCGAGCGATTCGGAGAACCCGTGCATCAGCGA---CGGCGGCAGCCGTCGC-GTAGCATCCGCCCCAGTCGT-GGCCTCGTCCCG----ACCGGGATGG-------------CCACGATGAAGGACGGATGAAACACTCAAA-CCGGCG-CAGCCACGCGCCAAGGGAAAATATCGAAAAAACACGAGCCCCACGCCGGG-CTCAGTGGCGTGGCGTGCCGTTGCACGCCACAGGGAT----CGAAACGACTCTCGGCAATGGATATCTCGGCTCTCGCATCGATGAAGAGCGCAGCGAAATGCGATACGTGGTGCGAATTGCAGAATCCCGCGAACCATCGAGAATTTGAACGCAAGTTGCGCCCGAAGCCAGCCGGCCAAGGGCACGTCCGCCTGGGCGTCAAGCGTTGCGTCGCTCCGTGCCAAC--TCCATCC-----CACCC------AACGGGTGTGTCGGGCGAGGCTCGGACGTGCAGAGTGGCCCGTCGTGCCCGCCGGCACGGCGGGCTGAAAAATGGGTG--ATCTTCTCATTGC---CCGCGAACAACAAGGGGTGGATG---------GAACGCGGCCTACGTTGTG--TCGTGCTGGCC---TGAGAGAGGATCGCA--CCTCCGAGGTGA----TCCCAACCC--ATGCGCCGA-----TCC--ACC----GACGGTGGCTTGGAAT Bletia_adenocarpa TCGAGACCGAAATAA--TATCGAGCGATTCGGAGAACCCGTGCATCAGCGA---CGGCGGCTGCCGTCGC-GTAGCATCCGTTCCAGTCGT-GGCCTCGTCCCC----ACCGGGATGG-------------CCACGATGAAGGACGGATGAAACACTCAAA-CCGGCG-CAGCCACGCGCCAAGGGAAAATATCGAAAAAACACGAGCCCCACGCCGGG-CTCAGTGGCGTGGCGTGCCGTTGCACGCCACAGGGAT----CGAAACGACTCTCGGCAATGGATATCTCGGCTCTCGCATCGATGAAAAGCGCAGCGAAATGCGATACGTGGTGCGAATTGCAGAATCCCGCGAACCATCGAGAATTTGAACGCAAGTTGCGCCCGAGGCCAGCCGGCCAAGGGCACGTCCGCCTGGGCGTCAAGCGTTGCGTCGCTCCGTGCCAAC--TCCATCC-----CACCC------AACGGGTGTGTCGGGCGAGGCTCGGACGTGCAGAGTGGCCCGTCGTGCCCGCCGGCACGGCGGGCTGAAGAGTGGGTG--ATCTTCTCATTGC---CCGCGAACAACAAGGGGTGGATG---------GAACGCGGCCTACGTTGTG--TCGTGCTGGCC---TGAGAGAGGATCGCA--CCTCCGAGGTGA----TCCCAACCC--ATGCGCCGA-----TCC--ACT----GATGGCGGCTTGGAAT Basiphyllaea_hamiltonii TCGAGACCGAAATAAAATATCGAGCGATTCGGAGAACCCGTGCATCGGCGA---CGGCGGCCGCCGTCGC-GTATCATCCGTCCAGGTCGT-GGCCTGATCCCC----GCCGGGGGGGCGG----------CCGCGATGGAGGGCGGATGAGACACTCAAA-CCGGCG-CAGCCACGCGCCAAGGGAAAATATCGAGGAGACACGAGCCCCGCGCAGGG-CTCGGTGGCATGGCGTGCCGTCGCACGCCATGGGGAT----CGACACGACTCTCGGCAATGGATATCTCGGCTCTCGCATCGATGAAGAGCGCAGCGAAATGCGATACGTGGTGCGAATTGCAGAATCCCGCGAACCATCGAGAATTTGAACGCAAGTTGCGCCCGAGGCCAGCCGGCCGAGGGCACGTCCGCCTGGGCGTCAAGCGTCGCGTCGCTCCGCGCCAGCCCTCCATCC-----CACCC------AGTGGGTGTGCCGGGCGAGGCTCGGACGTGCAGAGTGGCCCGTCGTGCCCGCCGGCGCGTCGGGCTGAAGAGCGGGCG--ATCGTCTCATCGCGC-CCACGAGCAACAAGGGGTGGATG---------GAAAGAGGCCTACGTTGCG--TCGTGCTGGCC---CGAGAAAAGATCACG--CCCCCGAGGCGA----TCCCGACCC--ATGCGCCGA-----TCC--ATCCACAGACGGCGGCTTGGAAT Basiphyllaea_carabiaiana TCGAGACCGAAATAAA-TATCGAGCGATTCGGAGAACCCGTGCATCGGCGA---CGGCGGCTGCCGTCGC-GTAACATCCGTCCCGGTCGCAGGCCTCATCCCC--------GTGTGGGGGG----------CACGATGAAGGACGGATGAAACACTCAAA-CCGGCG-CAGTCACGCGCCAAGGGAAGATATCGAAAGAACACGAGCCCCGCATCGGG-CTCGGTGGCGCGGCGTGC-GTCGCACGCCGCAGGGAT----CGACACGACTCTCGGCAATGGATATCTCGGCTCTCGCATCGATGAAGAGCGCAGCGAAATGCGATA-GTGGTGCGAATTGCAGAATCCCGCGAACCATCGAGAAATTGAACGCAAGTTGCGCCCGAGGCCAGCCGGCCGAGGGCACGTCCGCCTGGGCGTCAAGCATTGGTTCGCTCCGTGCCAGC--TCCATCC-----CACCC------GATGGGTGTGTCGGGCGAGGCTCGGACGTGCAGAGTGGCTCGTCGTGCCCGCCGGCGCGGCGGGCTGAA-AGTGGGCG--ATCGTCTCATTGC---CCGCGAACAACGAGGGGTGGACG---------GAACGAGGCCTACGTTGGG--TCGTGCCGGCC---CGAGAGAAGATTACG--CCCCCGAGGTGA----TCCCAACCC--ATGCGCCGA-----TCC--ACC----GGCGGCGGCTTGGAAT ; END; BEGIN CODONS; CODONPOSSET * CodonPositions = N: 1 - 721 ; CODESET * UNTITLED = Universal: all ; END; BEGIN ASSUMPTIONS; OPTIONS DEFTYPE = unord PolyTcount = MINSTEPS ; END;