#NEXUS [written Wed Feb 24 21:03:07 SGT 2016 by Mesquite version 3.03 (build 702) at MesemiteAir.local/10.0.1.21 (William Piel)] BEGIN TAXA; TITLE Taxa; DIMENSIONS NTAX=23; TAXLABELS Candida_chauliodes_ATCC_MYA_4356T_FJ623621_FJ614691 Candida_corydali_ATCC_MYA_4357T_FJ623622_FJ614692 Candida_bohiensis_ATCC_MYA_4363T_FJ172255_FJ614697 Candida_oxycetoniae_CBS_10844T_EU402934_EU402933 Candida_jiufengensis_CBS_10846T_EU402936_EU402935 Candida_pseudojiufengensis_CBS_10847T_EU402938_EU402937 Candida_hyderabadensis_CBS1044_AM180949_AM159100 Candida_orthopsilosis_ATCC_96139T_FJ545241_FJ746056 Candida_metapsilosis_CBS10907T_FJ872019_FJ746055 Candida_parapsilosis_CBS_604T_AJ635316_AY497686 Lodderomyces_elongisporus_CBS_2605T_AY391848_AY653547 Scheffersomyces_stipitis_NRRL_Y_71224T_JN943257_JQ025392 'Saccharomyces cerevisiae NRRL Y-12632NT AY046146 AY048154' Candida_cetonii_IMB1R2T_KC118129.3_KC118128.3 'Candida cetonii 77-5 KC315799 KC810948.2' Nematodospora_valgi_D37ST_HM627112_KM386993 'Nematodospora valgi D37R-2 JF693335 HM62705' Nematodospora_valgi_D37R_HM627165.2_HM627135.2 Nematodospora_valgi_IMB37RR_KM386995_KC315802 Nematodospora_valgi_37RS_KM386994_KM386996 Candida_verbasci_CBS12699T_JX515982_JX515981 Candida_sakaeoensis_CBS_12318T_AB696985_2_AB617978 Candida_morakotiae_BCC_7718_T_AB696987_AB457171 ; END; BEGIN CHARACTERS; TITLE Lodderomyces_23x1596; DIMENSIONS NCHAR=1596; FORMAT DATATYPE = DNA GAP = - MISSING = ?; MATRIX Candida_chauliodes_ATCC_MYA_4356T_FJ623621_FJ614691 --------------------------------------------------------------------------------------------------------------------------------------------TTTCCGTAGGTGAACCTGCGGAAGGATCATTACAGATTAGATAAA-----GCTTAACTGCTTA--------TTCTTACACATGTGTTTT-CTTTTTTG---AAAAA-TTGCTTTGGT----------AGTGAGTT-TTACTT-----GCTGCCAGAGGTTAAA-CT--TAACCAAACTTTATTTTAA----------GTCAAC-----AAGAAATCTAATAGTTAAAACTTTCAACAACGGATCTCTTGGTTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATATGAATTGCAGATATTCGTGAATCATCGAATCTTTGAACGCACATTGCGCCTTTTGGTATTCCAAAAGGCATGCCTGTTTGAGCGTCATTTCTCCTTCAAACCCCAG-GGTTTGGTGTTGAGCAAGACGTTTT-----------GAGTTTGCTTGAAAGATATTT-AGT------------------------------------TTTTCCAAAGGA-------------TAGGTGTTACCA-------------------------AATCTTTGA-------TACAGAGACTA--TGTAAATTTCCAAATTCGACC-TCAAATCAAGTAGCGGCGAGTGAAGCGGCAAAAGCTCAAATTTGAAATCTGGTACTTTCAGTGCCCGAGTTGTAATTTGAAGAAGGTATCTTTGGACCTGGCTCTTGTCTATGTTCCTTGGAACAGGACGTCACAGAGGGTGAGAATCCCGTGCGATGAGATGCTCCAGGTCTATGTAAAGTTCCTTCGAAGAGTCGAGTTGTTTGGGAATGCAGCTCTAAGTGGGTGGTAAATTCCATCTAAAGCTAAATATTGGCGAGAGACCGATAGCGAACAAGTACAGTGATGGAAAGATGAAAAGAACTTTGAAAAGAGAGTGAAAAAGTACGTGAAATTGTTGAAAGGGAAGGGCTTGAGATCAGACTTGGTATTTTGTATGTTGTTCTTTC-----GGGGGCGGCCTCTACAGTTTACCGGGCCAGCATCGGTTTGAACGGTAGGATAATGGTAAAGAAATGTGGCATTACTT--GTGATGTGTTATAGTCTTT-ATTGATACTGCCAGTTTAGACCGAGGTCTGCGATTTT-AATCTAGGATGTTGGCATAATGATCTTAAGTGC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Candida_corydali_ATCC_MYA_4357T_FJ623622_FJ614692 --------------------------------------------------------------------------------------------------------------------------------------------TTTCCGTAGGTGAACCTGCGGAAGGATCATTACAGATTAGA-GAA-----GCTTAATTGCTTT--------TTCTTACACTTGTGTTTT-TTTATATG---AAAAAATTGCTTTGGT----------AGTGGATA-TTAACTTATACGCTGCCAGAGGTTAAAACT--AAATTAAATTTTTTTTTAATACAAC-TTAGTCAAC-----AAGAAATCTAATAGTTAAAACTTTCAACAACGGATCTCTTGGTTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATATGAATTGCAGATATTCGTGAATCATCGAATCTTTGAACGCACATTGCGCCTTTTGGTATTCCAGAAGGCATGCTTGTTTGAGCGTCATTTCTCCCTCAAACCTTTG-GGTTTGGTGTTGAGCAAGACGTAT------------GAGTTTGCTTGAAATATATTTTAGT------------------------------------TATTACAAAGGA-------------TAGGTTCTACCA-------------------------AATCTTTGT-------ATAGATGACTACATTTATAAATCCAAATTCGACCCTCAAATCAAGTAGCGGCGAGTGAAGCGGCAAAAGCTCAAATTTGAAATCTGGTACTTTCAGTATCCGAGTTGTAATTTGAAGAAGGTATCTTTGGACCTGGCTCTTGTCTATGTTCCTTGGAACAGGACGTCACAGAGGGTGAGAATCCCGTGCGATGAGATGCTCCAGGTCTATGTAAAGTTCCTTCGAAGAGTCGAGTTGTTTGGGAATGCAGCTCTAAGTGGGTGGTAAATTCCATCTAAAGCTAAATATTGGCGAGAGACCGATAGCGAACAAGTACAGTGATGGAAAGATGAAAAGAACTTTGAAAAGAGAGTGAAAAAGTACGTGAAATTGTTGAAAGGGAAGGGCTTGAGATCAGACTTGATATTTTGTATGTTGTTCTTTC-----GGGGGCAGCCTCTACAGTTTATCGGGCCAGCATCGGTTTGAACGGTAGGATAATGGTAAAGAAATGTGGCATCACTT--GTGATGTGTTATAGTCTTTTATTGATACTGCCAGTTTAGACCGAGGACTGCGATTTTTAATCTAGGATGTTGGCATAATGATCTTAAGTCGC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Candida_bohiensis_ATCC_MYA_4363T_FJ172255_FJ614697 -----------------------------------------------------------------------------------------------------------------------------------GTAACAAGGTTTCCGTAGGTGAACCTGCGGAAGGATCATTACAGAATTAAGAGAA----GCTTAATTGCTTTTT------CTTTTACACATGTGTTTTTTATTAAAC-----TAAATTGCTTTGGT----------GGTGGTG-------CAAACTGCTGCCAGAGG-TAAACTT--TAACCAAATTTTATTTTTAC-------TAGTCAAC-----AAGAAATCTAATAGTTAAAACTTTCAACAACGGATCTCTTGGTTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATATGAATTGCAGATATTCGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTTTGGTATTCCAAAGGGCATGCCTGTTTGAGCGTCATTTCTCCCTCAAACCCTTG-GGTTTGGTGTTGAGCAAGACGCAG-------------AGTTTGCTTGAAAGGAATTTAGAA--------------------------------------TTTCAATGGA-------------TAGGTCTAACCA-------------------------AATCATTGA-----------TTACCTAATGAAAA--TTTCCAAATTCGACCTCAAATCAAGTAGCGGCGAGTGAAGCGGCAAAAGCTCAAATTTGAAATCTGGCACTTTCAGTGTCCGAGTTGTAATTTGAAGAAGGTATCTTTGGATCTGGCTCTTGTCTATGTTCCTTGGAACAGGACGTCACAGAGGGTGAGAATCCCGTGCGATGAGATGTTCCAGATCTATGTAAAGTTCCTTCGAAGAGTCGAGTTGTTTGGGAATGCAGCTCTAAGTGGGTGGTAAATTCCATCTAAAGCTAAATATTGGCGAGAGACCGATAGCGAACAAGTACAGTGATGGAAAGATGAAAAGAACTTTGAAAAGAGAGTGAAAAAGTACGTGAAATTGTTGAAAGGGAAGGGCTTGAGATCAGACTTGGTATTTTGTATGTTGTTCTTTC-----GGGGGCAGCCTCTACAGTTTATCGGGCCAGCATCGGTTTGGACGGTAGGATAATGGCAAAGAAATGTGGCA-AGCTTCGGTT-TGTGTTATAGTCTTT-GTTGATACTGCCAGTCTAGACCGAGGACTGCGGCTTC-TGCCTAGGATGCTGGCATAATGATCTTAAGTCGC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Candida_oxycetoniae_CBS_10844T_EU402934_EU402933 ----------------------------------------------------------------------------------------------------------------------------------------------TCCGTAGGTGAACCTGCGGAAGGATCATTACTGAAAATGTGA----GTGCTTAATTGCATTT--------ATCCACATGTGTTTTTCCATTTTTTTGAATAAACTTTGCTTTGGC----------GGTTCTAAACTGCCGCCAGAGACTTTAAAACTCAAACCT--GATTT----TTTTTAAATAAAA----CTAGTCAAC-GATTATATTTTTTAATAGTCAAAACTTTCAACAACGGATCTCTTGGTTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATATGAATTGCAGATATTCGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTCTGGTATTCCAGAGGGCATGCCTGTTTGAGCGTCATTTCTCCCTCAAACCTCTAAGGTTTGGTGATGAGCAATACGCTTTT---------ATGGTTTGCTTGAAAGAAAGAAGAAGA-------------------------------TTTGAAAAACAATGTA-------------TTAGGTACAAC------------------------CCACTCATTGG----AAAAAGAATCTTCGCCTTAAATTCTTCCAAATTCGACCTCAAATCAAGTAGCGGCGAGTGAAGCGGCAAAAGCTCAAATTTGAAATCTGGCACTTTCAGTGTCCGAGTTGTAATTTGAAGAAGGTATCTTTGGGTTTAGCTCTTGTCTATGTTTCTTGGAACAGAACGTCACAGAGGGTGAGAATCCCGTGCGATGAGATG-TCTAAACCTATGTAAAGTTCCTTCGAAGAGTCGAGTTGTTTGGGAATGCAGCTCTAAGTGGGTGGTAAATTCCATCTAAAGCTAAATATTGGCGAGAGACCGATAGCGAACAAGTACAGTGATGGAAAGATGAAAAGAACTTTGAAAAGAGAGTGAAAAAGTACGTGAAATTGTTGAAAGGGAAGGGCTTGAGATCAGACTTGGTATTTTGTATGTTGTTCTCTTCG---GGGGGCGGCCTCTACAGTTTACCGGGCCAGCATCAGTTTGAGCGGTAGGACAATTGCAAAGGAATGTGGCTTGGCTTCGGTTGAGTGTTATAGCCTTT-GTCGATACTGCCAGCTTAGACTGAGGACTGCGGCTTC-GGCCTAGGATGCTGGCATAATGATCTTAAGTCGC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Candida_jiufengensis_CBS_10846T_EU402936_EU402935 ----------------------------------------------------------------------------------------------------------------------------------------------TCCGTAGGTGAACCTGCGGAAGGATCATTACAGAATTTAAGT------GCTTAATTGCA----------TTTTTACACATGTGTTTTTCTTTATTT----AAAACTTACTTTGGT----------AGTGGTA--TTAACTTATTCGCTGCCAGAGATTAAACTT--AAAACAAATTTTTATTTTAA-------TTGTCAAA---TAAGATTATATAATAGTCAAAACTTTCAACAACGGATCTCTTGGTTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATATGAATTGCAGATATTCGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTTTGGTATTCCAAAGGGCATGCCTGTTTGAGCGTCATTTCTCCCTCATACCTTCG-GGTTTGGTGTTGAGCAATACGTAG-------------GGTTTGCTTGAAAGAAAGTAGGAG----------------------------------TATAA-CTAATGGA-------------TAGGTTTTTCC--------------------------ACTCATTGG-------AC--AACTCCAA---AA-TTTTTCCAAATTCGACCTCAAATCAAGTAGCGGCGAGTGAAGCGGCAAAAGCTCAAATTTGAAATCTAGCACTTTCAGTGTTCGAGTTGTAATTTGAAGAAGTTATCTTTGGGTCTGGCTCTTGTCTATGTTTCTTGGAACAGAACGTCACAGAGGGTGAGAATCCCGTGCGATGAGATGTCCCAGACCTATGTAAAGTTACTTCGAAGAGTCGAGTTGTTTGGGAATGCAGCTCTAAGTGGGTGGTAAATTCCATCTAAAGCTAAATATTGGCGAGAGACCGATAGCGAACAAGTACAGTGATGGAAAGATGAAAAGAACTTTGAAAAGAGAGTGAAAAAGTACGTGAAATTGTTGAAAGGGAAGGGCTTGAGATCAGACTTGGTATTTTATATGTTACTCTTTC-----GGGGGTGGCCTCTATTTTTTATCGGGCCAGCATCAGTTTGAGCGGTAGGATAATTGCAAAGAAATGTGGCACAGCTTCGGTTGTGTGTTATAGTCTTT-GTCGATACTGCCAGCTTAGACTGAGGACTGCGGCTTC-GGCCTAGGATGTTGGCATAATGATCTTAAGTCGC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Candida_pseudojiufengensis_CBS_10847T_EU402938_EU402937 ----------------------------------------------------------------------------------------------------------------------------------------------TCCGTAGGTGAACCTGCGGAAGGATCATTACAGAATTTAAGT------GCTTAATTGCA----------TTTTTACACATGTGTTTTTCTTT-TTT----AAAACTTACTTTGGT----------AGTGCTA--TTAATTTAGTCGCTGCCAGAGATTAAACTT--AAAACAAATTTTTATTTTAA-------TTGTCAAA---TAAGATTATATAATAGTCAAAACTTTCAACAACGGATCTCTTGGTTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATATGAATTGCAGATATTCGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTCTGGTATTCCAGAGGGCATGCCTGTTTGAGCGTCATTTCTCCCTCATACCTTCG-GGTTTGGTGTTGAGCAATACGCAG-------------AGTTTGCTTGAAAGAAAGTAGGAG----------------------------------TATAA-CTAATGGA-------------TAGGTATAACC--------------------------ACTCATTGG-------AC--AACTCCAA---AA-TTTTTCCAAATTCGACCTCAAATCAAGTAGCGGCGAGTGAAGCGGCAAAAGCTCAAATTTGAAATCTAGCACTTTCAGTGTTCGAGTTGTAATTTGAAGAAGGTATCTTTGGGTCTGGCTCTTGTCTATGTTTCTTGGAACAGAACGTCACAGAGGGTGAGAATCCCGTGCGATGAGATGTCCCAGACCTATGTAAAGTTCCTTCGAAGAGTCGAGTTGTTTGGGAATGCAGCTCTAAGTGGGTGGTAAATTCCATCTAAAGCTAAATATTGGCGAGAGACCGATAGCGAACAAGTACAGTGATGGAAAGATGAAAAGAACTTTGAAAAGAGAGTGAAAAAGTACGTGAAATTGTTGAAAGGGAAGGGCTTGAGATCAGACTTGGTATTTTATATGTTATTCTTTC-----GGGGGTAGCCTCTATTTTTTATCGGGCCAGCATCAGTTTGAGCGGTAGGATAATTGCAAAGAAATGTGGCTCTACTTCGGTCGAGTGTTATAGTCTTT-GTCGATACTGCCAGCTTAGACTGAGGACTGCGGCTTC-GGCCTAGGATGTTGGCATAATGATCTTAAGTCGC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Candida_hyderabadensis_CBS1044_AM180949_AM159100 -------------------------------------------------------------------------------------------------------------------------------------------------------GAACCTGCGGAAGGATCATTACAGAATGAAAAG-----TGCTTAACTGCA------TTTTTTCTTACACATGTGTTTTTCTTTTTTT-G--AAAACTTTGCTTTGG----------TGGGCCT--TCTATATGGGGCCTGCCAGAGATTAAACTA--CAACCAAATTTT--ATTTAA-------TTGTCAAC---C--GATTATTTAATAGTCAAAACTTTCAACAACGGATCTCTTGGTTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATATGAATTGCAGATATTCGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTTTGGTATTCCAAAGGGCATGCCTGTTTGAGCGTCATTTCTCCCTCAAACCCTCG-GGTTTGGTGTTGAGCGATACGCTG-------------GGTTTGCTTGAAAGGAAGGCGGAG----------------------------------TATAAACTA-TGGA-------------TAGGGTTTTTC-------------------------CACTCATTGG-------TACAAACTCCAA---AACTTCTTCCGAATTCGACCTCAAATCAAGTAGCGGCGAGTGAAGCGGCAAAAGCTCAAATTTGAAATCTGGCACTTTCAGTGCCCGAGTTGTAATTTGAAGAAGGTATCTTTGGGTCTGGCTCTTGTCTATGTTTCTTGGAACAGAACGTCACAGAGGGTGAGAATCCCGTGCGATGAGATGTTCCAGACCTATGTAAAGTTCCTTCGAAGAGTCGAGTTGTTTGGGAATGCAGCTCTAAGTGGGTGGTAAATTCCATCTAAAGCTAAATATTGGCGAGAGACCGATAGCGAACAAGTACAGTGATGGAAAGATGAAAAGAACTTTGAAAAGAGAGTGAAAAAGTACGTGAAATTGTTGAAAGGGAAGGGCTTGAGATCAGACTTGGTATTTTGTATGTTACTTCCTC-----GGGGGTGGCCTCTACAGTTTATCGGGCCAGCATCAGTTTGGGCGGTAGGATAAGTGCGAAGAAATGTGGCACTGCTTCGGTAGTGTGTTATAGTCTTT-GTCGATACTGCCAGCCTAGACTGAGGACTGCGGTTTC-GGCCTAGGATGTTGGCATAATGATCTTAAGTCGCCCGTCTTGAAACAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Candida_orthopsilosis_ATCC_96139T_FJ545241_FJ746056 -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGTGTTTTTCTTTTTTT-G--AAAACTTTGCTTTGG----------TGGGCCC--AC-------GGCCTGCCAGAGATTAAACTC--AACCAAATTTTA--TTTAAA---------GTCAAC---T--GATTAACTAATAGTCAAAACTTTCAACAACGGATCTCTTGGTTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATATGAATTGCAGATATTCGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTTTGGTATTCCAAAGGGCATGCCTGTTTGAGCGTCATTTCTCCCTCAAACCTTCG-GGTTTGGTGTTGAGCGATACGCTG-------------GGTTTGCTTGAAAGAAAGGCGGAG----------------------------------TATAAACTAATGGA-------------TAGGTTTTTTT------------------------CCACTCATTGG-------TACAAACTCCAA---AA--TCTTCCAAA---------------AGTAGCGGCGAGTGA-GCGGCAAAAGCTCAAATTTGAAATCTGGCACTTTCAGTGTCCGAGTTGTAATTTGAAGAAGGTATCTTTGGGTCTGGCTCTTGTCTATGTTTCTTGGAACAGAACGTCACAGAGGGTGAGAATCCCGTGCGATGAGATGACCCAGACCTATGTAAAGTTCCTTCGAAGAGTCGAGTTGTTTGGGAATGCAGCTCTAAGTGGGTGGTAAATTCCATCTAAAGCTAAATATTGGCGAGAGACCGATAGCGAACAAGTACAGTGATGGAAAGATGAAAAGAACTTTGAAAAGAGAGTGAAAAAGTACGTGAAATTGTTGAAAGGGAAGGGCTTGAGATCAGACTTGGTATTTTGTATGTTACTCTCTC-----GGGGGTGGCCTCTACAGTTTACCGGGCCAGCATCAGTTTGGGCGGTAGGACAATTGCAAAGAAATGTGGCACTGCCTCGGTAGTGTGTTATAGTCTTT-GTCGATACTGCCAGCCTAGACTGAGGACTGCGGCTTC-GGCCTAGGATGTTGGCATAATGATCTTAAGTCGCCCGTCTTGAAA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Candida_metapsilosis_CBS10907T_FJ872019_FJ746055 ----------------------------------------------------------------------------------------------------------------------GGAAGTAAAAGTCGTAACAAGGTTTCCGTAGGTGAACCTGCGGAAGGATCATTACAGAAATAGGAGAAGGTTGCTTAACTGCAATCCT-TTTCTTTCTACACATGTGTTTTTCTTTTTTTTG--AAAACTTTGCTTTGG----------TGGGCCC--AC-------GGCCTGCCAGAGATTAAACTC--AACCAAATTTTT--ATTTAA-------TTGTCAAC---TT-GATTAACTAATAGTCAAAACTTTCAACAACGGATCTCTTGGTTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATATGAATTGCAGATATTCGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTTTGGTATTCCAAAGGGCATGCCTGTTTGAGCGTCATTTCTCCCTCAAACCTTCG-GGTTTGGTGTTGAGCGATACGCTG-------------GGTTTGCTTGAAAGAAAGGCGGAG----------------------------------TATAAACTAATGGA-------------TAGGTTTTTTTTTT---------------------CCACTCATTGG-------TACAAACTCCAA---ACATTCTTCCAAATTCGACCTCAAATCAAGTAGCGGCGAGTGAAGCGGCAAAAGCTCAAATTTGAAATCTGGCACTTTCAGTGTCCGAGTTGTAATTTGAAGAAGGTATCTTTGGGTCTGGCTCTTGTCTATGTTTCTTGGAACAGAACGTCACAGAGGGTGAGAATCCCGTGCGATGAGATGACCCAGACCTATGTAAAGTTCCTTCGAAGAGTCGAGTTGTTTGGGAATGCAGCTCTAAGTGGGTGGTAAATTCCATCTAAAGCTAAATATTGGCGAGAGACCGATAGCGAACAAGTACAGTGATGGAAAGATGAAAAGAACTTTGAAAAGAGAGTGAAAAAGTACGTGAAATTGTTGAAAGGGAAGGGCTTGAGATCAGACTTGGTATTTTGTATGTTACTCTTTC-----GGGGGTGGCCTCTACAGTTTACCGGGCCAGCATCAGTTTGGGCGGTAGGAGAATTGCAAAGAAATGTGGCACTGCTTCGGTAGTGTGTTATAGTCTTT-GTCGATACTGCCAGCCTAGACTGAGGACTGCGGCTTC-GGCCTAGGATGTTGGCATAATGATCTTAAGTCGCCCGTCTTGAACC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Candida_parapsilosis_CBS_604T_AJ635316_AY497686 ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCTTAACTGCA------TTTTTTCTTACACATGTGTTTTTCTTTTTTT-G--AAAACTTTGCTTTGG----------TAGGCCT--TCTATATGGGGCCTGCCAGAGATTAAACT---CAACCAAATTTT--ATTTAA-------T-GTCAAC---C--GATTATTTAATAGTCAAAACTTTCAACAACGGATCTCTTGGTTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATATGAATTGCAGATATTCGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTTTGGTATTCCAAAGGGCATGCCTGTTTGAGCGTCATTTCTCCCTCAAACCCTCG-GGTTTGGTGTTGAGCGATACGCTG-------------GGTTTGCTTGAAAGAAAGGCGGAG----------------------------------TATAAACTAATGGA-------------TAGGTTTTTTC-------------------------CACTCATTGG-------TACAAACTCCAA---AACTTCTTCCAAATTCGACCTCAAATCAAGTAGCGGCGAGTGAAGCGGCAAAAGCTCAAATTTGAAATCTGGCACTTTCAGTGTCCGAGTTGTAATTTGAAGAAGGTATCTTTGGGTCTGGCTCTTGTCTATGTTTCTTGGAACAGAACGTCACAGAGGGTGAGAATCCCGTGCGATGAGATGTCCCAGACCTATGTAAAGTTCCTTCGAAGAGTCGAGTTGTTTGGGAATGCAGCTCTAAGTGGGTGGTAAATTCCATCTAAAGCTAAATATTGGCGAGAGACCGATAGCGAACAAGTACAGTGATGGAAAGATGAAAAGAACTTTGAAAAGAGAGTGAAAAAGTACGTGAAATTGTTGAAAGGGAAGGGCTTGAGATCAGACTTGGTATTTTGTATGTTACTCTCTC-----GGGGGTGGCCTCTACAGTTTACCGGGCCAGCATCAGTTTGAGCGGTAGGATAAGTGCAAAGAAATGTGGCACTGCTTCGGTAGTGTGTTATAGTCTTT-GTCGATACTGCCAGCTTAGACTGAGGACTGCGGCTTC-GGCCTAGGATGTTGGCATAATGATCTTAAGTCGC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Lodderomyces_elongisporus_CBS_2605T_AY391848_AY653547 -------------------------------------------------------------------------------------------------------------------------------------------GTTTCCGTAGGTGAACCTGCGGAAGGATCATTACAGAATTTTGAGAATTGTGCTTAACTGCACTTT---TCTTATCTACACACGTGTTTTTGTTTTATTCT-TAAAACTTGCTTTGGC----------AGTGGCTGCTTAATTGCTCTGCTGCCAGAGGATAAACTC--AACCTAAATTTTTTATTTTAAA----CTAGTCAACTGATTATATTTATTAATAGTCAAAACTTTCAACAACGGATCTCTTGGTTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATATGAATTGCAGATATTCGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTCTGGTATTCCGGAGGGCATGCCTGTTTGAGCGTCATTTCTCCCTCAAACCCCCG-GGTTTGGTGATGAGCAATACGCCA-------------GGTTTGCTTGAAAGTTAGGAGGAG--------------------------------TATTTATAACAATGTA-------------TTAGGTCTAAC------------------------CACTCCATTGTGCTTAATAAAAAGCTCCAATCTATAT--TTCAAACTTCGACCTCAAATCAAGTAGCGGCGAGTGAAGCGGCAATAGCTCAAATTTGAAATCTGGCACTTTCAGTGTCCGAGTTGTAATTTGAAGAAGGTATCTTTGGGTCTAGCTCTTGTCTATGTTTCTTGGAACAGAACGTCACAGAGGGTGAGAATCCCGTGCGATGAGATG-TCTAGATCTATGTAAAGTTCCTTCGAAGAGTCGAGTTGTTTGGGAATGCAGCTCTAAGTGGGTGGTAAATTCCATCTAAAGCTAAATATTGGCGAGAGACCGATAGCGAACAAGTACAGTGATGGAAAGATGAAAAGAACTTTGAAAAGAGAGTGAAAAAGTACGTGAAATTGTTGAAAGGGAAGGGCTTGAGATCAGACTTGGTATTTTGTATGTTACTCTCTC-----GGGGGTGGCCTCTACAGTTTACCGGGCCAGCATCAGTTTGAGCGGTAGGAGAATTGCGTAGGAATGTGGCTCGGCCTCGGTCGAGTGTTATAGCCTTC-GTCGATACTGCCAGCTTAGACTGAGGACTGCGGCTTC-GGCCTAGGATGTTGGCATAATGATCTTAAGTCGC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Scheffersomyces_stipitis_NRRL_Y_71224T_JN943257_JQ025392 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAACTGCGCGGCGAAAAAACCTTACACACAGTGTTTTCTTTATTAGA--AACTATTGCTTTGGTC---TGGCTCAGAAATGAGTTGGGCCAGAGGTTTACCAAACTTCAATTT--TATTGAATTGTTATTTTATTAATTTGTCAATTTGTTGATTAAATTCAAAAATCTTCAAAACTTTCAACAACGGATCTCTTGGTTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATATGAATTGCAGATTTTCGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTTTGGTATTCCAAAGGGCATGCCTGTTTGAGCGTCATTTCTCTCTCAAACCCTCG-GGTTTGGTATTGAGTGATACTCTTAGTCGA-ACTAGGCGTTTGCTTGAAAAGTATTGGCACGAGTGGTACTAAATAGTAC---------TGACAGAATATTTCAATGTA-------------TTAGGTTTATCCAACTCGTTGAGACTTCT--GGCGGTGAATTTTTGGTATATTGGCTTTGCCTTACAAAACAACAAACAAGTTTGACCTCAAATCAAGTAACGGCGAGTGAAGCGGCAAAAGCTCAAATTTGAAATCTGGCACCTTCGGTGTCCGAGTTGTAATTTGAAGAAGGTAACTTTGGAGTCAGCTCTTGTCTATGTTCCTTGGAACAGGACGTCACAGAGGGTGAGAATCCCGTGCGATGAGATG-TCTGATTCTATGTAAAGTGCTTTCGAAGAGTCGAGTTGTTTGGGAATGCAGCTCTAAGTGGGTGGTAAATTCCATCTAAAGCTAAATATTGGCGAGAGACCGATAGCGAACAAGTACAGTGATGGAAAGATGAAAAGAACTTTGAAAAGAGAGTGAAAAAGTACGTGAAATTGTTGAAAGGGAAGGGTTTGAGATCAGACTTGGTATTTTGTATGTCTTGCTTTC-----GGGTGGGGCCTCTACAGTTTACTGGGCCAGCATCGGTTTGGACGGTAGGATAATGACATTGGAATGTGGCACCACTTCGGTGGTGTGTTATAGACTTT-GTTGATACTGCCTGTCTAGACCGAGGACTGCGTCTTT--GACTAGGATGCTGGCATAATGATCTTAAACCGCCCGTCTTGAAACACGGACCAAGGAGTCTAACGTCTATGCGAGTGTTTGGGTGTAAAACCCGTACGCGTAATGAAAGTGAACGTAGGTGAGAGCTCTTTTGA--GTGCATCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGTAGCGGTTCTGACGTGCAAATCGATCGTCGAATTTGGGTATAGGGGCGAAAGA 'Saccharomyces cerevisiae NRRL Y-12632NT AY046146 AY048154' AAGAAATTTAATAATTTTGAAAATGGATTTTTTTGTTTTGGCAAGAGCATGAGAGCTTTTACTGGGCAAGAAGACAAGAGATGGAGAGTCCAGCCGGGCCTGCGCTTAAGTGCGCGGTCTTGCTAGGCTTGTAAGTTTCTTTCTTGCTATTCCAAACGGTGAGAGATTTCTGTGCTTTTGTTATAGGACAATTAAAACCGTTTCAA--TACAACACACTGTGGAGTTTTCATATCTTTGC--AACTTTTTCTTTGGGCATTCGAGCAATCGGGGCCCAGAGGTAACAAACACAAACAATTTTATCTATTCATTAAATTTTTGTCAAAAACAAGAATTTTCGTAACTGGAAATTTTAAAATATTAAAAACTTTCAACAACGGATCTCTTGGTTCTCGCATCGATGAAGAACGCAGCGAAATGCGATACGTAATGTGAATTGCAGAATTCCGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTATTCCAGGGGGCATGCCTGTTTGAGCGTCATTTCCTTCTCAAACATTCT--GTTTGGTAGTGAGTGATACTCTTTGGAGTTAACTTGAAATTGCTGGCCTTTTCATTGGATGTTTTTTTTCCAAAGAGAGGTTTCTCTGCGTGCTTGAGGTATAATGCAAGTACGGTCGTTTTAGGTTTTACCAACTGCGGCTAATCTTTTTTATACTGAGCGTATTGGAACGTTATCGATAAGAAGAGAGCGTCTAGGCGAACAATGTTCTTAAAGTAGTAACGGCGAGTGAAGCGGCAAAAGCTCAAATTTGAAATCTGGTACCTTCGGTGCCCGAGTTGTAATTTGGAGAGGGCAACTTTGGGGCCGTTCCTTGTCTATGTTCCTTGGAACAGGACGTCATAGAGGGTGAGAATCCCGTGTGGCGAGGAG-TGCGGTTCTTTGTAAAGTGCCTTCGAAGAGTCGAGTTGTTTGGGAATGCAGCTCTAAGTGGGTGGTAAATTCCATCTAAAGCTAAATATTGGCGAGAGACCGATAGCGAACAAGTACAGTGATGGAAAGATGAAAAGAACTTTGAAAAGAGAGTGAAAAAGTACGTGAAATTGTTGAAAGGGAAGGGCATTTGATCAGACATGGTGTTTTGTGCCCTCTGCTCCTTGTGGGTAGGGGAATCTCGCATTTCACTGGGCCAGCATCAGTTTTGGTGGCAGGATAAATCCATAGGAATGTAGCTTGCCTC--GGTAAGTATTATAGCCTGT-GGGAATACTGCCAGCTGGGACTGAGGACTGCGACGTA-AGTCAAGGATGCTGGCATAATGGTTATATGCCGCCCGTCTTGAAACACGGACCAAGGAGTCTAACGTCTATGCGAGTGTTTGGGTGTAAAACCCATACGTGTAATGAAAGTGAACGTAGGTTGGGGCCTCGCAAGAGGTGCACAATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGTAGCGGTTCTGACGTGCAAATCGATCGTCGAATTTGGGTATAGGGGCGAAAGA Candida_cetonii_IMB1R2T_KC118129.3_KC118128.3 ---------------------------------------------------------------------------------------------------------------------------------TCGTAACAAGGTTTCCGTAGGTGAACCTGCGGAAGGATCATTACAGAATTTAAGT------GCTTAATTGCA----------TTTTTACACATGTGTTTTTCTTT-ATT----AAAACTTACTTTGGT----------AGTGCTA--TTAATTTAGTCGCTGCCAGAGACTAAACTT--AAAACAAATTTTTATTTTAA-------TTGTCAAA---TAAGATTATTTAATAGTCAAAACTTTCAACAACGGATCTCTTGGTTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATATGAATTGCAGATATTCGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTTTGGTATTCCAAAGGGCATGCCTGTTTGAGCGTCATTTCTCCCTCATACCTTCG-GGTTTGGTGTTGAGCAATACGCTG-------------GGTTTGCTTGAAAGAAAGTAGGAG----------------------------------TATAA-CTAATGGA-------------TAGGTATAACC--------------------------ACTCATTGG-------AC--AACTCCAA---AA-TTTTTCCAAATTCGACCTCAAATCAAGTAGCGGCGAGTGAAGCGGCAAAAGCTCAAATTTGAAATCTAGCACTTTCAGTGTTCGAGTTGTAATTTGAAGAAGGTATCTTTGGATCTGGCTCTTGTCTATGTTTCTTGGAACAGAACGTCACAGAGGGTGAGAATCCCGTGCGATGAGATGATCCAGATCTATGTAAAGTTCCTTCGAAGAGTCGAGTTGTTTGGGAATGCAGCTCTAAGTGGGTGGTAAATTCCATCTAAAGCTAAATATTGGCGAGAGACCGATAGCGAACAAGTACAGTGATGGAAAGATGAAAAGAACTTTGAAAAGAGAGTGAAAAAGTACGTGAAATTGTTGAAAGGGAAGGGCTTGAGATCAGACTTGGTATTTTGTATGTTACTCTCTC-----GGGGGTGGCCTCTACTTTTTATCGGGCCAGCATCAGTTTGAGCGGTAGGATAATTGCAAAGAAATGTGGCTCAACTTCGGTTGTGTGTTATAGTCTTT-GTCGATACTGCCAGCTTAGACTGAGGACTGCGGCTTC-GGCCTAGGATGTTGGCATAATGATCTTAAGTCGCCCGTCTTGA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 'Candida cetonii 77-5 KC315799 KC810948.2' ----------------------------------------------------------------------------------------------------------------------GGAAGTAAAAGTCGTAACAAGGTTTCCGTAGGTGAACCTGCGGAAGGATCATTACAGAATTTAAGT------GCTTAATTGCA----------TTTTTACACATGTGTTTTTCTTT-ATT----AAAACTTACTTTGGT----------AGTGCTA--TTAATTTAGTCGCTGCCAGAGACTAAACTT--AAAACAAATTTTTATTTTAA-------TTGTCAAA---TAAGATTATTTAATAGTCAAAACTTTCAACAACGGATCTCTTGGTTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATATGAATTGCAGATATTCGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTTTGGTATTCCAAAGGGCATGCCTGTTTGAGCGTCATTTCTCCCTCATACCTTCG-GGTTTGGTGTTGAGCAATACGCTG-------------GGTTTGCTTGAAAGAAAGTAGGAG----------------------------------TATAA-CTAATGGA-------------TAGGTATAACC--------------------------ACTCATTGG-------AC--AACTCCAA---AA-TTTTTCCAAATTCGACCTCAAATCAAGTAGCGGCGAGTGAAGCGGCAAAAGCTCAAATTTGAAATCTAGCACTTTCAGTGTTCGAGTTGTAATTTGAAGAAGGTATCTTTGGATCTGGCTCTTGTCTATGTTTCTTGGAACAGAACGTCACAGAGGGTGAGAATCCCGTGCGATGAGATGATCCAGATCTATGTAAAGTTCCTTCGAAGAGTCGAGTTGTTTGGGAATGCAGCTCTAAGTGGGTGGTAAATTCCATCTAAAGCTAAATATTGGCGAGAGACCGATAGCGAACAAGTACAGTGATGGAAAGATGAAAAGAACTTTGAAAAGAGAGTGAAAAAGTACGTGAAATTGTTGAAAGGGAAGGGCTTGAGATCAGACTTGGTATTTTGTATGTTACTCTCTC-----GGGGGTGGCCTCTACTTTTTATCGGGCCAGCATCAGTTTGAGCGGTAGGATAATTGCAAAGAAATGTGGCTCAACTTCGGTTGTGTGTTATAGTCTTT-GTCGATACTGCCAGCTTAGACTGAGGACTGCGGCTTC-GGCCTAGGATGTTGGCATAATGATCTTAAGTCGCCCGTCTTGA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Nematodospora_valgi_D37ST_HM627112_KM386993 ----------------------------------------------------------------------------------------------------------------------------------------------------------CCTGCGGAAGGATCATTACAGAATTTAGAG-------CTTAATTGCT-----------TTATACACATGTGTTTTTTGATAAT-----ACAACTTGCTTTGGT----------GGTGCTTTATTG------TCGCCACCAGAGA-TAAACTT--AACAAACGTTTATTATTTAG----------TCAAC-----AAGAAATCTAATAGTTAAAACTTTCAACAACGGATCTCTTGGTTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATATGAATTGCAGATATTCGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTTTGGTATTCCAAAGGGCATGCCTGTTTGAGCGTCATTTCTCCCTCAAACCAATT-GGTTTGGTGTTGAGCAATACGCCG-------------GGTTTGCTTGAAAGATAGAGGAGT------------------------------------AATTTCAATGGA-------------TAGGTCTAACCA------------------------CACTCATTGG------CAAAAAACTCCAA----TATTCTTCCAAATTCGACCTCAAATCAAGTAGCGGCGAGTGAAGCGGCAAAAGCTCAAATTTGAAATCTGGCACTTTCAGTGTCCGAGTTGTAATTTGAAGAAGGTATCTTTGGGCCTGGCTCTTGTCTATGTTCCTTGGAACAGGACGTCACAGAGGGTGAGAATCCCGTGCGATGAGATGCCCCAGGTCTATGTAAAGTTCCTTCGAAGAGTCGAGTTGTTTGGGAATGCAGCTCTAAGTGGGTGGTAAATTCCATCTAAAGCTAAATATTGGCGAGAGACCGATAGCGAACAAGTACAGTGATGGAAAGATGAAAAGAACTTTGAAAAGAGAGTGAAAAAGTACGTGAAATTGTTGAAAGGGAAGGGCTTGAGATCAGACTTGGTATTTTGTATGTTGTTCTCTC-----GGGGGCAGCCTCTACAGTTTACCGGGCCAGCATCGGTTTGAGCGGTAGGATAATTGCGAAGGAATGTGGCACAACTTCGGTTGTGTGTTATAGTCTTT-GTCGATACTGCCAGCTTAGACCGAGGACTGCGGCTTC-GGCCTAGGATGCTGGCATAATGATCTTAAGTCGCCCGTCTTGAAACACGGACC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 'Nematodospora valgi D37R-2 JF693335 HM62705' -----------------------------------------------------------------------------------------------------------------------------------------------------------CTGCGGAAGGATCATTACAGAATTTAGAG-------CTTAATTGCT-----------TTATACACATGTGTTTTTTGATAAT-----ACAACTTGCTTTGGT----------GGTGCTTTATTG------TCGCCACCAGAGA-TAAACTT--AACAAACGTTTATTATTTAG----------TCAAC-----AAGAAATCTAATAGTTAAAACTTTCAACAACGGATCTCTTGGTTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATATGAATTGCAGATATTCGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTTTGGTATTCCAAAGGGCATGCCTGTTTGAGCGTCATTTCTCCCTCAAACCAATT-GGTTTGGTGTTGAGCAATACGCCG-------------GGTTTGCTTGAAAGATAGAGGAGT------------------------------------AATTTCAATGGA-------------TAGGTCTAACCA------------------------CACTCATTGG------CAAAAAACTCCAA----TATTCTTCCAAATTCGACCTCAAATCAAGTAGCGGCGAGTGAAGCGGCAAAAGCTCAAATTTGAAATCTGGCACTTTCAGTGTCCGAGTTGTAATTTGAAGAAGGTATCTTTGGGCCTGGCTCTTGTCTATGTTCCTTGGAACAGGACGTCACAGAGGGTGAGAATCCCGTGCGATGAGATGCCCCAGGTCTATGTAAAGTTCCTTCGAAGAGTCGAGTTGTTTGGGAATGCAGCTCTAAGTGGGTGGTAAATTCCATCTAAAGCTAAATATTGGCGAGAGACCGATAGCGAACAAGTACAGTGATGGAAAGATGAAAAGAACTTTGAAAAGAGAGTGAAAAAGTACGTGAAATTGTTGAAAGGGAAGGGCTTGAGATCAGACTTGGTATTTTGTATGTTGTTCTCTC-----GGGGGCAGCCTCTACAGTTTACCGGGCCAGCATCGGTTTGAGCGGTAGGATAATTGCGAAGGAATGTGGCACAACTTCGGTTGTGTGTTATAGTCTTT-GTCGATACTGCCAGCTTAGACCGAGGACTGCGGCTTC-GGCCTAGGATGCTGGCATAATGATCTTAAGTCGCCCGTCTT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Nematodospora_valgi_D37R_HM627165.2_HM627135.2 ---------------------------------------------------------------------------------------------------------------------------------TCGTAACAAGGTTTCCGTAGGTGAACCTGCGGAAGGATCATTACAGAATTTAGAG-------CTTAATTGCT-----------TTATACACATGTGTTTTTTGATAAT-----ACAACTTGCTTTGGT----------GGTGCTTTATTG------TCGCCACCAGAGA-TAAACTT--AACAAACGTTTATTATTTAG----------TCAAC-----AAGAAATCTAATAGTTAAAACTTTCAACAACGGATCTCTTGGTTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATATGAATTGCAGATATTCGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTTTGGTATTCCAAAGGGCATGCCTGTTTGAGCGTCATTTCTCCCTCAAACCAATT-GGTTTGGTGTTGAGCAATACGCCG-------------GGTTTGCTTGAAAGATAGAGGAGT------------------------------------AATTTCAATGGA-------------TAGGTCTAACCA------------------------CACTCATTGG------CAAAAAACTCCAA----TATTCTTCCAAATTCGA-----------GTAGCGGCGAGTGAAGCGGCAAAAGCTCAAATTTGAAATCTGGCACTTTCAGTGTCCGAGTTGTAATTTGAAGAAGGTATCTTTGGGCCTGGCTCTTGTCTATGTTCCTTGGAACAGGACGTCACAGAGGGTGAGAATCCCGTGCGATGAGATGCCCCAGGTCTATGTAAAGTTCCTTCGAAGAGTCGAGTTGTTTGGGAATGCAGCTCTAAGTGGGTGGTAAATTCCATCTAAAGCTAAATATTGGCGAGAGACCGATAGCGAACAAGTACAGTGATGGAAAGATGAAAAGAACTTTGAAAAGAGAGTGAAAAAGTACGTGAAATTGTTGAAAGGGAAGGGCTTGAGATCAGACTTGGTATTTTGTATGTTGTTCTCTC-----GGGGGCAGCCTCTACAGTTTACCGGGCCAGCATCGGTTTGAGCGGTAGGATAATTGCGAAGGAATGTGGCACAACTTCGGTTGTGTGTTATAGTCTTT-GTCGATACTGCCAGCTTAGACCGAGGACTGCGGCTTC-GGCCTAGGATGCTGGCATAATGATCTTAAGTCGCCCGTCTTGAAACACGGACCAA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Nematodospora_valgi_IMB37RR_KM386995_KC315802 ---------------------------------------------------------------------------------------------------------------------------------TCGTAACAAGGTTTCCGTAGGTGAACCTGCGGAAGGATCATTACAGAATTTAGAG-------CTTAATTGCT-----------TTATACACATGTGTTTTTTGATAAT-----ACAACTTGCTTTGGT----------GGTGCTTTATTG------TCGCCACCAGAGA-TAAACTT--AACAAACGTTTATTATTTAG----------TCAAC-----AAGAAATCTAATAGTTAAAACTTTCAACAACGGATCTCTTGGTTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATATGAATTGCAGATATTCGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTTTGGTATTCCAAAGGGCATGCCTGTTTGAGCGTCATTTCTCCCTCAAACCAATT-GGTTTGGTGTTGAGCAATACGCCG-------------GGTTTGCTTGAAAGATAGAGGAGT------------------------------------AATTTCAATGGA-------------TAGGTCTAACCA------------------------CACTCATTGG------CAAAAAACTCCAA----TATTCTTCCAAATTCGA-----------GTAGCGGCGAGTGAAGCGGCAAAAGCTCAAATTTGAAATCTGGCACTTTCAGTGTCCGAGTTGTAATTTGAAGAAGGTATCTTTGGGCCTGGCTCTTGTCTATGTTCCTTGGAACAGGACGTCACAGAGGGTGAGAATCCCGTGCGATGAGATGCCCCAGGTCTATGTAAAGTTCCTTCGAAGAGTCGAGTTGTTTGGGAATGCAGCTCTAAGTGGGTGGTAAATTCCATCTAAAGCTAAATATTGGCGAGAGACCGATAGCGAACAAGTACAGTGATGGAAAGATGAAAAGAACTTTGAAAAGAGAGTGAAAAAGTACGTGAAATTGTTGAAAGGGAAGGGCTTGAGATCAGACTTGGTATTTTGTATGTTGTTCTCTC-----GGGGGCAGCCTCTACAGTTTACCGGGCCAGCATCGGTTTGAGCGGTAGGATAATTGCGAAGGAATGTGGCACAACTTCGGTTGTGTGTTATAGTCTTT-GTCGATACTGCCAGCTTAGACCGAGGACTGCGGCTTC-GGCCTAGGATGCTGGCATAATGATCTTAAGTCGCCCGTCT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Nematodospora_valgi_37RS_KM386994_KM386996 ----------------------------------------------------------------------------------------------------------------------GGAAGTAAAAGTCGTAACAAGGTTTCCGTAGGTGAACCTGCGGAAGGATCATTACAGAATTTAGAG-------CTTAATTGCT-----------TTATACACATGTGTTTTTTGATAAT-----ACAACTTGCTTTGGT----------GGTGCTTTATTG------TCGCCACCAGAGA-TAAACTT--AACAAACGTTTATTATTTAG----------TCAAC-----AAGAAATCTAATAGTTAAAACTTTCAACAACGGATCTCTTGGTTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATATGAATTGCAGATATTCGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTTTGGTATTCCAAAGGGCATGCCTGTTTGAGCGTCATTTCTCCCTCAAACCAATT-GGTTTGGTGTTGAGCAATACGCCG-------------GGTTTGCTTGAAAGATAGAGGAGT------------------------------------AATTTCAATGGA-------------TAGGTCTAACCA------------------------CACTCATTGG------CAAAAAACTCCAA----TATTCTTCCAAATTCGAA----------GTAGCGGCGAGTGAAGCGGCAAAAGCTCAAATTTGAAATCTGGCACTTTCAGTGTCCGAGTTGTAATTTGAAGAAGGTATCTTTGGGCCTGGCTCTTGTCTATGTTCCTTGGAACAGGACGTCACAGAGGGTGAGAATCCCGTGCGATGAGATGCCCCAGGTCTATGTAAAGTTCCTTCGAAGAGTCGAGTTGTTTGGGAATGCAGCTCTAAGTGGGTGGTAAATTCCATCTAAAGCTAAATATTGGCGAGAGACCGATAGCGAACAAGTACAGTGATGGAAAGATGAAAAGAACTTTGAAAAGAGAGTGAAAAAGTACGTGAAATTGTTGAAAGGGAAGGGCTTGAGATCAGACTTGGTATTTTGTATGTTGTTCTCTC-----GGGGGCAGCCTCTACAGTTTACCGGGCCAGCATCGGTTTGAGCGGTAGGATAATTGCGAAGGAATGTGGCACAACTTCGGTTGTGTGTTATAGTCTTT-GTCGATACTGCCAGCTTAGACCGAGGACTGCGGCTTC-GGCCTAGGATGCTGGCATAATGATCTTAAGTCGCCCGTCTTGA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Candida_verbasci_CBS12699T_JX515982_JX515981 ----------------------------------------------------------------------------------------------------------------------------------------------TCCGTAGGTGAACCTGCGGAAGGATCATTACAGATTTAGAAAA-----GCTTAATTGCTTA--------TTCTTACAGTTGTGTTTT-TTTTATTG---AAAAAATTTCTTTGGT----------AGTGAATT-TC---------GCTGCCAAAGGTTAAA-CT--AAATTAAATTTTATTACTA----------GTCAAC-----AAGAAATCTAATAGTTAAAACTTTCAACAACGGATCTCTTGGTTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATATGAATTGCAGATATTCGTGAATCATCGAATTTTTGAACGCACATTGCGCCTTTTGGTATTCCAGAAGGCATGCTTGTTTGAGCGTCATTTCTCCCTCAAACCTTTG-GGTTTGGTGATGAGCAAGACACC-------------GAGTTTGCTTGAAA---AGCGGAGG------------------------------------AAAAGAAACCAA-------------CAGGGATTGCC-----------------------------------------------------------------------------------TTAGTAGCGGCGAGTGAAGCGGCAAAAGCTCAAATTTGAAATCTGGTACTTTCAGTATCCGAGTTGTAATTTGAAGAAGGTATCTTTGGATCTGGCTCTTGTCTATGTTTCTTGGAACAGAACGTCACAGAGGGTGAGAATCCCGTGCGATGAGATGTCCCAGATCTATGTAAAGTTCCTTCGAAGAGTCGAGTTGTTTGGGAATGCAGCTCTAAGTGGGTGGTAAATTCCATCTAAAGCTAAATATTGGCGAGAGACCGATAGCGAACAAGTACAGTGATGGAAAGATGAAAAGAACTTTGAAAAGAGAGTGAAAAAGTACGTGAAATTGTTGAAAGGGAAGGGCTTGAGATCAGACTTGGTATTTTATATGTTACTTCTTC-----GGGGGTAGCCTCTATAGTTTATCGGGCCAGCATCGGTTTGAACGGTAGGATAATGGTAAAGAAATGTGGCATTACTT--GTAATGTGTTATAGTCTTT-ATTGATACTGCCAGTTTAGACCGAGGACTGCGATTTTTAATCTAGGATGTTGGCATAATGATCTTAAGTCGCCCGTCTTGAAC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Candida_sakaeoensis_CBS_12318T_AB696985_2_AB617978 -----------------------------------------------------------------------------------------------------------------------------------------------------------------AAGGATCATTACAGATTAGA-GAA-----GCTTAAGTGCTTT--------TTCTTACACATGTGTTTTTCTTTTTTG---AAAAAATTGCTTTGGT----------AGTGGGGC-TTTGTTGTCCTGCTGCCAGAGGTTAAACTT--TTAACAAACTTTTTATTTA-------CTAGTCAAC-----AAGAAATCTAATAGTTAAAACTTTCAACAACGGATCTCTTGGTTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATATGAATTGCAGATATTCGTGAATCATCGAATCTTTGAACGCACATTGCGCCTTTTGGTATTCCAGAAGGCATGCCTGTTTGAGCGTCATTTCTCCTTCAAACCCCCG-GGTTTGGTGTTGAGCAAGACGTTTTT----------GAGTTTGCTTGAAA-----------------------------------------------------AACCAA-------------CAGGGATTGCC-----------------------------------------------------------------------------------TTAGTAGCGGCGAGTGAAGCGGCAAAAGCTCAAATTTGAAATCTGGTACTTTCAGTGCCCGAGTTGTAATTTGAAGAAGGTATCTTTGGGCCTGGCTCTTGTCTATGTTCCTTGGAACAGGACGTCACAGAGGGTGAGAATCCCGTGCGATGAGATGCTCCAGGTCTATGTAAAGTTCCTTCGAAGAGTCGAGTTGTTTGGGAATGCAGCTCTAAGTGGGTGGTAAATTCCATCTAAAGCTAAATATTGGCGAGAGACCGATAGCGAACAAGTACAGTGATGGAAAGATGAAAAGAACTTTGAAAAGAGAGTGAAAAAGTACGTGAAATTGTTGAAAGGGAAGGGCTTGAGATCAGACTTGGTATTTTGTATGTTATTCTCTC-----GGGGATGGCCTCTACAGTTTATCGGGCCAGCATCGGTTTGAACGGTAGGATAATGGCAAAGAAATGTGGCTTCATTC--GTGTTGTGTTATAGTCTTT-GTTGATACTGCCAGTTTAGACCGAGGACTGCGATTTT--ATCTAGGATGTTGGCATAATGATCTTAAGTCGCCCGTCTT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Candida_morakotiae_BCC_7718_T_AB696987_AB457171 -----------------------------------------------------------------------------------------------------------------------------------------------------------------AAGGATCATTACAGATTAGA-GAA-----GCTTAATTGCTTT--------TTCTTACACTTGTGTTTT-CTTATATG---AAAAA-TTTCTTTGGT----------AGTGGACT-CAATTGTT--CGCTGCCAGAGGTTAAA-CT--CAACTAAACTTTTTTTTTT-ATTAT-ATTGTCAAC-----AAGAAATCTAATAGTTAAAACTTTCAACAACGGATCTCTTGGTTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATATGAATTGCAGATATTCGTGAATCATCGAATCTTTGAACGCACATTGCGCCTTTTGGTATTCCAGAAGGCATGCTTGTTTGAGCGTCATTTCTCCTTCAAACCTTTG-GGTTTGGTGTTGAGCAAGACGATTTTC--------AGAGTTTGCTTGAAA-----------------------------------------------------AACCAA-------------CAGGGATTGCC-----------------------------------------------------------------------------------TTAGTAGCGGCGAGTGAAGCGGCAAAAGCTCAAATTTGAAATCTAGTACTTTCAGTGCTCGAGTTGTAATTTGAAGAAGGTATCTTTGGACCTGGCTCTTGTCTATGTTCCTTGGAACAGGACGTCACAGAGGGTGAGAATCCCGTGCGATGAGATGCTCCAGGTCTATGTAAAGTTCCTTCGAAGAGTCGAGTTGTTTGGGAATGCAGCTCTAAGTGGGTGGTAAATTCCATCTAAAGCTAAATATTGGCGAGAGACCGATAGCGAACAAGTACAGTGATGGAAAGATGAAAAGAACTTTGAAAAGAGAGTGAAAAAGTACGTGAAATTGTTGAAAGGGAAGGGCTTGAGATCAGACTTGATATTTTGTATGTTATTCTTTC-----GGGGGTAGCCTCTACAGTTTATCGGGCCAGCATCGGTTTGAACGGTAGGATAATGGTAAAGAAATGTGGCATCACTT--GTGATGTGTTATAGTCTTT-ATTGATACTGCCAGTTTAGACCGAGGACTGCGATTTTTAATCTAGGATGTTGGCATAATGATCTTAAGTCGC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ; END; BEGIN ASSUMPTIONS; TYPESET * UNTITLED (CHARACTERS = Lodderomyces_23x1596) = unord: 1 - 1596; END; BEGIN CODONS; CODESET * UNTITLED (CHARACTERS = Lodderomyces_23x1596) = universal: 1 - 1596; END; BEGIN MESQUITECHARMODELS; ProbModelSet * UNTITLED (CHARACTERS = Lodderomyces_23x1596) = 'Jukes-Cantor': 1 - 1596; END; BEGIN TREES; Title Lodderomyces_23x1596; LINK Taxa = Taxa; TRANSLATE [0] 1 Candida_chauliodes_ATCC_MYA_4356T_FJ623621_FJ614691, [1] 2 Candida_corydali_ATCC_MYA_4357T_FJ623622_FJ614692, [2] 3 Candida_bohiensis_ATCC_MYA_4363T_FJ172255_FJ614697, [3] 4 Candida_oxycetoniae_CBS_10844T_EU402934_EU402933, [4] 5 Candida_jiufengensis_CBS_10846T_EU402936_EU402935, [5] 6 Candida_pseudojiufengensis_CBS_10847T_EU402938_EU402937, [6] 7 Candida_hyderabadensis_CBS1044_AM180949_AM159100, [7] 8 Candida_orthopsilosis_ATCC_96139T_FJ545241_FJ746056, [8] 9 Candida_metapsilosis_CBS10907T_FJ872019_FJ746055, [9] 10 Candida_parapsilosis_CBS_604T_AJ635316_AY497686, [10] 11 Lodderomyces_elongisporus_CBS_2605T_AY391848_AY653547, [11] 12 Scheffersomyces_stipitis_NRRL_Y_71224T_JN943257_JQ025392, [12] 13 'Saccharomyces cerevisiae NRRL Y-12632NT AY046146 AY048154', [13] 14 Candida_cetonii_IMB1R2T_KC118129.3_KC118128.3, [14] 15 'Candida cetonii 77-5 KC315799 KC810948.2', [15] 16 Nematodospora_valgi_D37ST_HM627112_KM386993, [16] 17 'Nematodospora valgi D37R-2 JF693335 HM62705', [17] 18 Nematodospora_valgi_D37R_HM627165.2_HM627135.2, [18] 19 Nematodospora_valgi_IMB37RR_KM386995_KC315802, [19] 20 Nematodospora_valgi_37RS_KM386994_KM386996, [20] 21 Candida_verbasci_CBS12699T_JX515982_JX515981, [21] 22 Candida_sakaeoensis_CBS_12318T_AB696985_2_AB617978, [22] 23 Candida_morakotiae_BCC_7718_T_AB696987_AB457171; TREE 'PAUP_1' = (13:0.994376,(12:0.128178,((21:0.07355,(22:0.046603,(23:0.030874,(1:0.034004,2:0.043727):0.029059):0.0):0.019284):0.123457,((3:0.068313,((16:0.00000001,17:0.00000001):0.00000001,(18:0.00000001,(19:0.00000001,20:0.00000001):0.000692):0.00045):0.047012):0.002635,((4:0.110434,11:0.061293):0.056238,(((5:0.013868,6:0.009987):0.008525,(14:0.00000001,15:0.00000001):0.005346):0.029597,((7:0.015008,10:0.001897):0.008602,(8:0.005803,9:0.005912):0.019183):0.044809):0.003184):0.047622):0.017308):0.412703):0.994376); END; Begin MESQUITE; MESQUITESCRIPTVERSION 2; TITLE AUTO; tell ProjectCoordinator; timeSaved 1456318988098; getEmployee #mesquite.minimal.ManageTaxa.ManageTaxa; tell It; setID 0 3998204861549133791; endTell; getEmployee #mesquite.charMatrices.ManageCharacters.ManageCharacters; tell It; setID 0 7894582625864750510; mqVersion 303; checksumv 0 3 2239311999 null getNumChars 1596 numChars 1596 getNumTaxa 23 numTaxa 23 short true bits 15 states 15 sumSquaresStatesOnly 582110.0 sumSquares 582110.0 longCompressibleToShort false usingShortMatrix true NumFiles 1 NumMatrices 1; mqVersion; endTell; getWindow; tell It; suppress; setResourcesState false false 218; setPopoutState 400; setExplanationSize 0; setAnnotationSize 0; setFontIncAnnot 0; setFontIncExp 0; setSize 1063 707; setLocation 8 23; setFont SanSerif; setFontSize 10; getToolPalette; tell It; endTell; desuppress; endTell; getEmployee #mesquite.trees.BasicTreeWindowCoord.BasicTreeWindowCoord; tell It; makeTreeWindow #3998204861549133791 #mesquite.trees.BasicTreeWindowMaker.BasicTreeWindowMaker; tell It; suppressEPCResponse; setTreeSource #mesquite.trees.StoredTrees.StoredTrees; tell It; setTreeBlock 1; toggleUseWeights off; endTell; setAssignedID 2288.1456318981879.4487889499965938752; getTreeWindow; tell It; setExplanationSize 30; setAnnotationSize 20; setFontIncAnnot 0; setFontIncExp 0; setSize 845 635; setLocation 8 23; setFont SanSerif; setFontSize 10; getToolPalette; tell It; endTell; setActive; getTreeDrawCoordinator #mesquite.trees.BasicTreeDrawCoordinator.BasicTreeDrawCoordinator; tell It; suppress; setTreeDrawer #mesquite.trees.SquareLineTree.SquareLineTree; tell It; setNodeLocs #mesquite.trees.NodeLocsStandard.NodeLocsStandard; tell It; branchLengthsToggle on; toggleScale on; toggleBroadScale off; toggleCenter on; toggleEven on; setFixedTaxonDistance 0; endTell; setEdgeWidth 4; showEdgeLines on; orientUp; endTell; setBackground White; setBranchColor Black; showNodeNumbers off; showBranchColors on; labelBranchLengths off; centerBrLenLabels on; showBrLensUnspecified on; showBrLenLabelsOnTerminals on; setBrLenLabelColor 0 0 255; setNumBrLenDecimals 6; desuppress; getEmployee #mesquite.trees.BasicDrawTaxonNames.BasicDrawTaxonNames; tell It; setColor Black; toggleColorPartition off; toggleColorAssigned on; toggleShadePartition off; toggleShowFootnotes on; toggleNodeLabels on; toggleCenterNodeNames off; toggleShowNames on; namesAngle ?; endTell; endTell; setTreeNumber 1; setDrawingSizeMode 0; toggleLegendFloat on; scale 0; toggleTextOnTree off; showWindow; endTell; desuppressEPCResponse; getEmployee #mesquite.trees.ColorBranches.ColorBranches; tell It; setColor Red; removeColor off; endTell; getEmployee #mesquite.ornamental.BranchNotes.BranchNotes; tell It; setAlwaysOn off; endTell; getEmployee #mesquite.ornamental.ColorTreeByPartition.ColorTreeByPartition; tell It; colorByPartition off; endTell; getEmployee #mesquite.ornamental.DrawTreeAssocDoubles.DrawTreeAssocDoubles; tell It; setOn on; setDigits 4; writeAsPercentage off; toggleCentred off; toggleHorizontal on; toggleWhiteEdges on; setFontSize 10; setOffset 0 0; endTell; getEmployee #mesquite.ornamental.DrawTreeAssocStrings.DrawTreeAssocStrings; tell It; setOn on; toggleCentred on; toggleHorizontal on; setFontSize 10; setOffset 0 0; endTell; getEmployee #mesquite.trees.TreeInfoValues.TreeInfoValues; tell It; panelOpen false; endTell; endTell; endTell; getEmployee #mesquite.charMatrices.BasicDataWindowCoord.BasicDataWindowCoord; tell It; showDataWindow #7894582625864750510 #mesquite.charMatrices.BasicDataWindowMaker.BasicDataWindowMaker; tell It; getWindow; tell It; setExplanationSize 30; setAnnotationSize 20; setFontIncAnnot 0; setFontIncExp 0; setSize 845 635; setLocation 8 23; setFont SanSerif; setFontSize 10; getToolPalette; tell It; endTell; setTool mesquite.charMatrices.BasicDataWindowMaker.BasicDataWindow.arrow; colorCells #mesquite.charMatrices.ColorByState.ColorByState; tell It; setStateLimit 9; toggleUniformMaximum on; endTell; colorRowNames #mesquite.charMatrices.TaxonGroupColor.TaxonGroupColor; colorColumnNames #mesquite.charMatrices.CharGroupColor.CharGroupColor; colorText #mesquite.charMatrices.NoColor.NoColor; setBackground White; toggleShowNames on; toggleShowTaxonNames on; toggleTight off; toggleThinRows off; toggleShowChanges off; toggleSeparateLines off; toggleShowStates on; toggleAutoWCharNames off; toggleAutoTaxonNames off; toggleShowDefaultCharNames off; toggleConstrainCW on; toggleBirdsEye off; toggleShowPaleGrid off; toggleShowPaleCellColors off; toggleShowPaleExcluded off; togglePaleInapplicable on; toggleShowBoldCellText off; toggleAllowAutosize off; toggleColorsPanel off; toggleLinkedScrolling on; toggleScrollLinkedTables off; endTell; getWindow; tell It; forceAutosize; endTell; hideWindow; getEmployee #mesquite.charMatrices.ColorCells.ColorCells; tell It; setColor Red; removeColor off; endTell; getEmployee #mesquite.categ.StateNamesStrip.StateNamesStrip; tell It; showStrip off; endTell; getEmployee #mesquite.charMatrices.AnnotPanel.AnnotPanel; tell It; togglePanel off; endTell; getEmployee #mesquite.charMatrices.CharReferenceStrip.CharReferenceStrip; tell It; showStrip off; endTell; getEmployee #mesquite.charMatrices.QuickKeySelector.QuickKeySelector; tell It; autotabOff; endTell; getEmployee #mesquite.charMatrices.SelSummaryStrip.SelSummaryStrip; tell It; showStrip off; endTell; getEmployee #mesquite.align.AlignToDropped.AlignToDropped; tell It; gapCosts 8 3 2 2; subCosts 10 5 10 10 10 5 5 10 10 10 5 10; endTell; getEmployee #mesquite.molec.ColorByAA.ColorByAA; tell It; emphasizeDegeneracy off; endTell; getEmployee #mesquite.molec.SequenceInfoEditor.SequenceInfoEditor; tell It; panelOpen false; endTell; endTell; endTell; endTell; end;