#NEXUS [written Tue Mar 10 15:52:58 JST 2015 by Mesquite version 3.02 (build 681) at kinokoken-PC/172.18.1.22] BEGIN TAXA; TITLE Taxa; DIMENSIONS NTAX=36; TAXLABELS Russula_compacta_EU598157_outgroup Russula_risigallina_AY061713_ Russula_risigallina_DQ422022 Russula_amoenipes_AY061656 Russula_cuprea_AY061667_ Russula_velenovskyi_AY061721_ Russula_integra_AY061683 Russula_integriformis_AY061684_ Russula_decolorans_AY061670 Russula_decolorans_KP149062 Russula_decolorans_AY194601 Russula_decolorans_FJ845432_ Russula_xerampelina_DQ367916_ Russula_xerampelina_JF899571_ Russula_paludosa_KJ705227_ Russula_paludosa_KF007950_ Russula_paludosa_KP149048 Russula_paludosa_KP149049 Russula_paludosa_AY061703_ Russula_paludosa_GU373485_ Russula_paludosa_KP149060 Russula_Paludosa_KP149055 Russula_paludosa_KP149057 Russula_paludosa_KP149066 Russula_paludosa_AJ971402 Russula_paludosa_KP149061 Russula_paludosa_KP149063 Russula_paludosa_KP149064 Russula_paludosa_UK_JQ888199 Russula_paludosa_KP149065 Russula_paludosa_AJ971400 Russula_paludosa_JX029923 Russula_paludosa_KP149050 Russula_paludosa_KP149051 Russula_paludosa_KP149053 Russula_paludosa_JF908659_ ; END; BEGIN CHARACTERS; TITLE Character_Matrix; DIMENSIONS NCHAR=768; FORMAT DATATYPE = DNA INTERLEAVE GAP = - MISSING = .; MATRIX Russula_compacta_EU598157_outgroup -----------------------------------GGAAGGATCATTATTGAAAAAATGAGGC-GCAT-GAGCTGTCGCTGACC-TCC-CAAGGTTGTGCACGCCCAA--GTGCTCTCACAC--ATCCATCTCA-CCCCTTTGTGCATCACCGCGTGGGCCC--CCTTTTC--AGAGGGCTCACGTTTTCACATAAAAA--CTTGATACAGTGTAGAATGTTTTCTTTG---------TTTGCGGTCACACGCAATCAGTACAACTTTCAACAACGGATCTCTTGGCTCTCGCATCGATGAAGAACGCAGCGAAATGCGATACGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCCCCTTGGTATTCCGAGGGGCACACCCGTTTGAGTGTCGTGAAATTCTCAAAA--------------CCTTTTCTTTT---GGGAAAAGGATTTTGGACTTGGAGGTTTGATGCTCGCTTTCACTTTCGGAAAGCGAGCTCCTCTCAAATGCATCAGTAGGGTCCGCTTTGCTGATCCTTGACGTGATAAGATGTTTCTACGTTTTGGATCTAGCACTGTCCC-TTGGACATCTGCTTCTAAC-----CGTCT--TGCGGAC-AATGATGGTGCT-CCGGTCACCGCC-ATCTACATTGGCGGG---AGGCTGGACCCACGAA--TGTAACCTTGACCTCAAATC-GGGTGAGACTACCCGCTGAACTTAAGCATATCATTAAGCGGAGGA Russula_risigallina_AY061713_ AAAAGTCGTAACAAGGCATCCGAAGAAGCGCCGGCGGAAGGATCATTATCGTACAACGGGGGT-GCGA-TGGCTGTCGCTGACCCTTCGAAAGGTCGTGCACGCTCGA--GCACTCTCATAA--ATCCATCTCA-CCCCTTTGTGCATCACCGCGTGGGTTC--CCTTTGC-AGGAGGGC-CACGTTTTCACACAAAA---CTTGATACAGTGTAGAATGTTATT-------------TTTGCGGTCGCACGCAATCAATACAACTTTCAACAACGGATCTCTTGGCTCTCGCATCGATGAAGAACGCAGCGAAATGCGATACGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCCCCTTGGCATTCCGAGGGGCACACCCGTTTGAGTGTCGTGAAATTATCAAAWAC------------CCTTTTCTGTTTACTGAAAAGGATTTTTGGACTTGGASGTTTAATGCTTGCCTTTCACATTTGAAAGTGAGCTCCTCTCAAATGAATTAGTGGGGTCCGCTTTGTCGGTCCTTGACGTGATAAGATGTTTCTACGTTTTGGATTTGGCACTGTCCCTTTGGATTCCTGCTCCTAAC-----TGTCC--AACGGACAAATGATGGTGCT-CCGGTCGACTCC-GTCTACATTGGCGGGGGAGGGCTGGACCCGCACTA-GAAAAGCTTGCCCTGACCTC-GGGTGAGACTA---------------------------------- Russula_risigallina_DQ422022 AAAAGTCGTAACAAGGTTTCCGTAGGTGAACCTGCGGAAGGATCATTATCGTACAACGGGGGT-GCGA-GGGCTGTCGCTGACCCTTCGAAAGGTCGTGCACGCTCGA--GCACTCTCATAA--ATCCATCTCA-CCCCTTTGTGCATCACCGCGTGGGTCC--CCTTTGC-AGGAGGGCYCACGTTTTCACACAAAA---CTTGATACAGTGTAGAATGTTATY-------------TTTGCGGTCACACGCAATCAATACAACTTTCAACAACGGATCTCTTGGCTCTCGCATCGATGAAGAACGCAGCGAAATGCGATACGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCCCCTTGGCATTCCGAGGGGCACACCCGTTTGAGTGTCGTGAAATTATCAAAAAC------------CCTTTTCTGTTTACTGAAAAGGATTTTTGGACTTGGAGGTTTAATGCTTGCCTTTCACATTTGAAAGTGAGCTCCTCTCAAATGAATTAGTGGGGTCCGCTTTGTCGGTCCTTGACGTGATAAGATGTTTCTACGTTTTGGAYTYGGCACTGTCCCTTTGGATTCCTGCTCCTAAC-----TGTCC--AACGGACAAACGATGGTGCT-CCGGTCGCCTCC-GTCTACATTGGCGGGGGAGGGCTGGACCCACAAAA-GAAAACCTTGACCTCAAATC-GGGTGAGACTACCCGCTGAACTTAAGCATAT.............. Russula_amoenipes_AY061656 AAAAGTCGTAACAAGGTTTCCGTAGGTGAACCTACAGAAGGATCATTATCGTACAACCAAGGT-GCAA-AGGCTGTCGCTGACCCTC--AAAGGTCGTGCACGCCCGA--GCGCTCTCACACA-ATCCATCTCA---CCTTTGTGCATCACCGCGTGGGTCCCCCTTTTCC-GGGAAGGCTTGCGTTTTCACATAAAA---CTTGATACAGTGTAGAATGTTTCTT------------TTTGCGGTCACAAGCAATCAATACAACTTTCAACAACGGATCTCTTGGCTCTCGCATCGATGAAGAACGCAGCGAAATGCGATACGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCCCCTTGGCATTCCGAGGGGCACACCCGTTTGAGTGTCGTGAAATCTTCAAAATC------------CTTTTTTCTTTGA-------GGGGTTTTGGACTTGGAGGTTTAATGCTCGCCCTTT-CTTTCGAAAGTGAGCTCCTCTCAAATGAATCAGTGGGGTCCGGTTTGCTGATCCTTGACGTGATAAAATGTTTCTACGTTTTGGGTTTAGCTCTGTTCC-TTGGACGCCTGCTCCTAAC-----TGTCT--CATTGAC-AATGATGGTGCT-CTGGTCACTGCCGGTCTACATCGGCGGG---AGGCTGGACCCACAGAAAGAAAACCTTGACCTCAAATC-GGGTGAGACTACCCGCTGAACTTAAGCATATCAATAAGCGGAGGA Russula_cuprea_AY061667_ AAAAGTCGTAACAAGGTTTCCGTAGGTGAACCTGCGGAAGGATCATTATCGTACAACGGAGGT-GCAA-GGGCTGTCGCTGACC-CTC-AAAGGTCGTGCACGCCCGAGCGCGCTCTTACACA-ATCCATCTCA-CCCCTTTGTGCATCACCGCGTGGGTCCTCCCCTCTGTGGGAGGGCCTGCGTTTTCACATAAAA---CTCGATACAGTGTAGAATGTTCATT------------TTTGCGGTTACACGCAATCAATACAACTTTCAACAACGGATCTCTTGGCTCTCGCATCGATGAAGAACGCAGCGAAATGCGATACGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCCCCTTGGCATTCCGAGGGGCACACCCGTTTGAGTGTCGTGAAATTCTCAAAAA-------------CCCTTTCCTTT-----GATGGGATTTTTGGACTTGGAGGTTCAATGCTCGCCTTCAGCTTCTGAAAGCGAGCTCCTCTCAAATAAATTAGTGGGGTCCGCTTTGCTGGTCCTTGACGTGATAAGATGTTTCTACGTTTTGGATTTGGCACTGTCCC-TTTGGATCCTGCTCCTAACTCGTCCGTCT--CACGGAC-AACGATGGTGCT-TCGGTCACCGCC-ATTTACATCGGCGGG---AGGCTGGACCCACAAAA-ACGAACCTTGACCTCAAATC-GGGTGAGACTACCCGCTGAACTTAAGCATATCAATAAGCGGAGGA Russula_velenovskyi_AY061721_ AAAAGTCGTAACAAGGTTTCCGTAGGTGAACCTGCGGAAGGATCATTATCGTATAACCGAGGT-GCAA-GGGCTGTTGCTGACCTTC--AAAGGTTGTGCACGCCCAA--GCACTCTCACACATCCATCTCTCA-CCCCCTTGTGCATCGCCGCGTGGGCCCCCCCTTTGC-AGGAGGGCTTGCGTTTTCACATAAAA---CTTGATACAGTGTAGAATGTTTTCT------------TTTGCGGTCACACGCAATCAATACAACTTTCAACAACGGATCTCTTGGCTCTCGCATCGATGAAGAACGCAGCGAAATGCGATACGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCCCCTTGGCATTCCGAGGGGCACACCCGTTTGAGTGTCGTGAAATCATCAAAAAT------------CTTTTTCTT-----TGAAAAGGATTTTTGGACTTGGAGGTTTCATGCTTG-CTTTTGCCTTTGAAAGCGAGCTCCTCTGAAATAAATTAGTGGGGTCCGCTTTGCTGATCCTTAATGTGATAAGATGTTTCTACATTTTGGATTTAGCACTGTCCC-TTGGACGCCTGCTCCTAACTAGT-TGTCC--CTTGGAC-AATGATGGTGCTCCTGGTCACCGCC-ATCCACATTGGCGGG---AGGCTGGACCCACAAAAGAAAAACCTTGACCTCAAATC-GGGTGAGACTACCCGCTGAACTTAAGCATATCAATAAGCGGAGGA Russula_integra_AY061683 AAAAGTCGTAACAAGGTTTCCGTAGGTGAACCTGCGGAAGGATCATTATTGTATAACCGAGGT-GCAA-GGGCTGTCGCTGACCTTTT-AAAGGTTGTGCACGCCCGA--GCACTCTCACACA-ATCCATCTCACCCCTTTTGTGCATCACCGCGTGGGCCC-CCCTTTGC-AGGAGGGCTTGCGTTTTCACATAAAA---CTTGATACAGTGTAGAATGTTCTTTTTATTTATTTATTTTGCGGTCACACGCAATCAATACAACTTTCAACAACGGATCTCTTGGCTCTCGCATCGATGAAGAACGCAGCGAAATGCGATACGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCCCCTTGGCATTCCGAGGGGCACACCCGTTTGAGTGTCGTGAAATCATCAAAAAC------------CCTTTTTGTTT----GAAAAGGATTTTTGGACTTGGAGGTTCCATGCTCGCC-TTTGCTTTTGAAGGTGAGCTCCTCTCAAATAAATTAGTGGGGTCCGCTTTGCTGATCCTTAATGTGATAAGATGTTTCTACATTTTGGATTTAGCACTGTCCC-TTGGAAGCCTGCTCCTAAC-----TGTCT--TTTGGAC-AATGATGGTGCT-CCGGTCATCGCC-ATCTACATTGGCGGG---AGGCTGGACCCACAAA--GACAACCTTGACCTCAAATC-GGGTGAGACTACCCGCTGAACTTAAGCATATCAATAAGCGGAGGA Russula_integriformis_AY061684_ AAAAGTCGTAACAAGGTTTCCGTAGGTGAACCTGCGGAAGGATCATTATTGTATAACCGAGGTGGCAA-GGGCTGTCGCTGACCTTTC-AAAGGTTGTGCACGCCCAA--GCACACTCTCACACATCCATCTCACCCCTTTTGTGCATCACCGCGTAGGCCCTCCCTTTGCAAGGAGGGCTTGCGTTTTCACATAAAAACTTTTGATACAGTATAGAATGTTCCTT-------TTTATTTTGCGGTCAAACGCAATCAATACAACTTTCAACAACGGATCTCTTGGCTCTCGCATCGATGAAGAACGCAGCGAAATGCGATACGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCCCCTTGGCATTCCGAGGGGCACACCCGTTTGAGTGTCGTGAAATCATCAAAAAC------------CCTTTTTCTTT----GAAAAGGATTTTTGAACTTGGAGGTTCCATGCTTGCC-------TTTGAAGGTGAGCTCCTCTCAAATAAATTAGTGGGGTCCGCTTTGCTGATCCTTAATGTGATAAGATGTTTCTACATTTTGGATTTAGCACTGTCCC-TTGGATGCCTGCTCCTAAC-----TGTCT--TTTGGAC-AATGATGGTGCT-CCGGTCATCGCC-ATCTACATTGGCAAA---AGGCTGGACCCACAAA--AAAAACCTTGACCTCAAATC-GGGTGAGACTACCCGCTGAACTTAAGCATATCAATAAGCGGAGGA Russula_decolorans_AY061670 AAAAGTCGTAACAAGGTTTCCGTAGGTGAACCTGCGGAAGGATCATTATTTTAAAACCGAGTT-ACAT...GCTGTCGCTCACC-TTC-AAAGGTTGT-.ACG.TCGA--GTGCTCTCACAC--ATCCATCTCACCCCTTTTGTGCATCACCGCGTGGGCCC-TCCTTTGC-AGGAGGGCTTGCGTTTTCACATAAAA---CTTGATACAGTGTAGAATGTTTTCT-------TTTCTTTTGCGGTCAAACGCAATTAATACAACTTTCAACAACGGATCTCTTGGCTCTCGCATCGATGAAGAACGCAGCGAAATGCGATACGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCCCCTTGGCATTCCGAGGGGCACACCCGTTTGAGTGTCGTGAAATCATCAAAACCTTTTCCTTTGATCCTCTTTTGGTCG-GGAAAAGGATTTTTGGACTTGGAGGTTCTATGCTCG-------CTTTTGAAAGCGAGCTCCTCTCAAATGAATTAGTGGGGTCTGCTTTGCTGATCCTTGACGTGATAAGATGTTTCTACGTTTTGGATTTGGCACTGTCCC-TTGGACGCCTGCTCCTAAC-----CGTCT--GTTGGAC-GACGATGGTGCT-TCGGTCACTGCC-ATCTACATTGGCGGG---AGGCTGGACCCAC-AAA-AAAGACCTTGACCTCAAATC-GGGTGAGACTACCCGGTGAACTTAAGCATATCAATAAGCGGAGGA Russula_decolorans_KP149062 AAAAGTCGTAACAAGGTTTCCGTAGGTGAACCTGCGGAAGGATCATTATTGTAAAACCGAGGC-ACAAAGAGCTGTCGCTGACC-TTC-AAAGGTTGTGCACGCTCGA--GTGCTCTCACAC--ATCCATCTCACCCCTTTTGTGCATCACCGCGTGGGCCC-TCCTTTGC-AGGAGGGCTTGCGTTTTCACATAAAA---CTTGATACAGTGTAGAATGTTTTCT-------TTTCTTTTGCGGTCAAACGCAATTAATACAACTTTCAACAACGGATCTCTTGGCTCTCGCATCGATGAAGAACGCAGCGAAATGCGATACGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCCCCTTGGCATTCCGAGGGGCACACCCGTTTGAGTGTCGTGAAATCATCAAAACCTTTTCCTTTGATCCTCTTTTGGTCG-GGAAAAGGATTTTTGGACTTGGAGGTTCTATGCTCG-------CTTTTGAAAGCGAGCTCCTCTCAAATGAATTAGTGGGGTCTGCTTTGCTGATCCTTGACGTGATAAGATGTTTCTACGTTTTGGATTTGGCACTGTCCC-TTGGACGCCTGCTCCTAAC-----CGTCT--GTTGGAC-GACGATGGTGCT-TCGGTCACTGCC-ATCTACATTGGCGGG---AGGCTGGACCCACAAAA-AAAGACCTTGACCTCAAATC-GGGTGAGACTACCCGCTGAACTT---------------------- Russula_decolorans_AY194601 --------------------------------TGCGGAAGGATCATTATTGTAAAACCGAGGC-ACAAAGAGCTGTCGCTGACC-TTC-AAAGGTTGTGCACGCTCGA--GTGCTCTCACAC--ATCCATCTCACCCCTTTTGTGCATCACCGCGTGGGCCC-TCCTTTGC-AGGAGGGCTTGCGTTTTCACATAAAA---CTTGATACAGTGTAGAATGTTTTCT-------TTTCTTTTGCGGTCAAACGCAATTAATACAACTTTCAACAACGGATCTCTTGGCTCTCGCATCGATGAAGAACGCAGCGAAATGCGATACGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCCCCTTGGCATTCCGAGGGGCACACCCGTTTGAGTGTCGTGAAATCATCAAAACCTTTTCCTTTGATCCTCTTTTGGTCG-GGAAAAGGATTTTTGGACTTGGAGGTTCTATGCTCG-------CTTTTGAAAGCGAGCTCCTCTCAAATGAATTAGTGGGGTCTGCTTTGCTGATCCTTGACGTGATAAGATGTTTCTACGTTTTGGATTTGGCACTGTCCC-TTGGACGCCTGCTCCTAAC-----CGTCT--GTTGGAC-GACGATGGTGCT-TCGGTCACTGCC-ATCTACATTGGCGGG---AGGCTGGACCCAC-AAA-AAAGACCTTGACCTCAAATC-GGGTGAGACTACCCGCTGAACTTAAGCATATCAATAAGCGGAGGA Russula_decolorans_FJ845432_ AAAAGTCGTAACAAGGTTTCCGTAGGTGAACCTGCGGAAGGATCATTATCGTACAACCGAGGT-GCAT-GGGCTGTCGCTGACC-TCC-AAAGGTCGTGCACGCCCAT--GCGCTCTCACAC--ATCCATCTCA--CC-TTTGTGCATCACCGCGTGGGTCC--CCTTTGC-AGGAGGGCTTGCGTTTTCACATAAAA---CTTGATACAGTGTAGAATGTTTTA-------------TTTGCGGTCACACGCAATCAATACAACTTTCAACAACGGATCTCTTGGCTCTCGCATCGATGAAGAACGCAGCGAAATGCGATACGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCCCCTTGGCATTCCGAGGGGCACACCCGTTTGAGTGTCGTGAAATCATCAAAACCTTCTCTTTGA--CCCTCTTTGGTCG-GGAAAAGGATTTTTGGACTTGGAGGTTCCATGCTCGCC-TTCACTTTTGAAAGTGAGCTCCTCTCAAATGAATTAGTGGGGTCCGCTTTGCTGGTCCTTGACGTGATAAGATGTTTCTACGTTTTGGATTTAGCACTGTCCC-TTGGATGCCTGCTCCTAAC-----TGTCT--CACGGAC-AACGATGGTGCT-CTGGTCACTGCC-ATCTACATTGGCGGG---AGGCTGGACCCACAAAA-GAAAACCTTGACCTCAAATC-GGGTGAGACTACCCGCTGAACTTAAGCATATCAATAAGCGGAGGA Russula_xerampelina_DQ367916_ AAAAGTCGTAACAAGGTTTCCGTAGGTGAACCTGCGGAAGGATCATTATCGTACAACGGAGGT-GTGA-GGGCTGTCGCTGACCTTT--AGAGGTCGTGCACGCCCGA--GCACTTTCATACA-ATCCATCTCA-CCCCTTTGTGCATCACCGCGTGGGTCC--CCTTTGC-GGGAGGGCCCGCGTTTTCACATAAAA---CTCGATACAGTGTAGAATGTTCT--------------TTTGCGATCACACGCAATCAATACAACTTTCAACAACGGATCTCTTGGCTCTCGCATCGATGAAGAACGCAGCGAAATGCGATACGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCCCCTTGGCATTCCGAGGGGCACACCCGTTTGAGTGTCGTGAAATCCTCAAAAAC------------CCTTTTCTTGTCA-GGAAAGGGATTTTTGGACTTGGAGGTTCAATGCTCGCCTTTCACTTTTGAAAGTGAGCTCCTCTCAAATGAATTAGTGGGGTCCGCTTTGCTGATCCTTAACGTGATAAGATGCTTCTACGTTTTGGACCCGGCTCTGTCCC-TTGGATGCCTGCTTCTAAC-----TGTCC--CACGGAC-AATGATGGTGCT-TCGGTCACTGCC-ATCTACATTGGCGGG---AGGCTGGACCCACAAAATGAAAACCTTGACCTCAAATC-GGGTGAGACTACCCGCTGAACTTAAGCATATCAATAAGCGGAGGA Russula_xerampelina_JF899571_ --------------------------------TGCGG-AGGATCATTATCGTACAACGGAGGT-GTGA-GGGCTGTCGCTGACC-TTT-AGAGGTCGTGCACGCCCGA--GCACTTTCATACA-ATCCATCTCA-CCCCTTTGTGCATCACCGCGTGGGTCC--CCTTTGC-GGGAGGGCCCGCGTTTTCACATAAAA---CTCGATACAGTGTAGAATGTTCT--------------TTTGCGATCACACGCAATCAATACAACTTTCAACAACGGATCTCTTGGCTCTCGCATCGATGAAGAACGCAGCGAAATGCGATACGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCCCCTTGGCATTCCGAGGGGCACACCCGTTTGAGTGTCGTGAAATCCTCAAAAAC------------CCTTTTCTTGTCA-GGAAAGGGATTTTTGGACTTGGAGGTTCAATGCTCGCCTTTCACTTTTGAAAGTGAGCTCCTCTCAAATGAATTAGTGGGGTCCGCTTTGCTGATCCTTAACGTGATAAGATGCTTCTACGTTTTGGACCCGGCTCTGTCCC-TTGGATGCCTGCTTCTAAC-----TGTCC--CACGGAC-AATGATGGTGCT-TCGGTCACTGCC-ATCTACATTGGCGGG---AGGCTGGACCCACAAAATGAAAACCTTGACCTCAAATC-GGGTGAGACTACCCGCTGAACTTAAGCATATCAATAAGCGGAGGA Russula_paludosa_KJ705227_ ---------------------------------------GGATCATTATTGTACAACGGAGGT-GTGA-GGGCTGTCGCTGACCTTTC-AAAGGTCGTGCACGCCCAA--GCACTTTCATACA-ATCCATCTCA-CCCCTTTGTGCATCACCGCGTGGGTCC--CCTTTGC-GGGAGGGCTCACGTTTTCACACAAAA---CTCGATACAGTGTAGAATGTTCT--------------TTTGCGATCACACGCAATCAATACAACTTTCAACAACGGATCTCTTGGCTCTCGCATCGATGAAGAACGCAGCGAAATGCGATACGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCCCCTTGGCATTCCGAGGGGCACACCCGTTTGAGTGTCGTGAAATCCTCAAAAAC------------CCTTTTCTTGTCA-GGAATGGGATTTTTGGACTTGGAGGTTCAATGCTCGCCTTTCACCTTTGAAAGTGAGCTCCTCTCAAATGAATTAGTGGGGTCCGCTTTGCTGATCCTTAACGTGATAAGATGCTTCTACGTTTTGGATCTAGCACTGTCCC-TTGGATGCCTGCTCCTAAC-----TGTCCCACACGGAC-AATGATGGTGCT-CTGGTCACCGCC-ATTTACATTGGCGGG---AGGCTGGACCCACAAAACAAAAACCTTGACCTCAAATC-GGGTGAGACTACCCGCTGAACTTAAGCATAT-------------- Russula_paludosa_KF007950_ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAA---CTCGATACAGTGTAGAATGTTCT--------------TTTGCGATCACACGCAATCAATACAACTTTCAACAACGGATCTCTTGGCTCTCGCATCGATGAAGAACGCAGCGAAATGCGATACGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTCGCGCCCCTTGGCATTCCGAGGGGCACACCCGTTTGAGTGTCGTGAAATCCTCAAAAAC------------CCTTTTCTTGTCA-GGAATGGGATTTTTGGACTTGGAGGTTCAATGCTCGCCTTTCACCTTTGAAAGTGAGCTCCTCTCAAATGAATTAGTGGGGTCCGCTTTGCTGATCCTTAACGTGATAAGATGCTTCTACGTTTTGGATCTAGCACTGTCCC-TTGGATGCCTGCTCCTAAC-----TGTCCCACACGGAC-AATGATGGTGCT-CTGGTCACCGCC-ATTTACATTGGCGGG---AGGCTGGACCCACAAAACAAAAACCTTGACCTCAAATC-GGGTGAGACTACCCGCTGAACTTAAGCATATCAATAAGCGGAGGA Russula_paludosa_KP149048 -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGGGTCCGCTTTGCTGATCCTTAACGTGATAAGATGCTTCTACGTTTTGGATCTAGCACTGTCCC-TTGGACGCCTGCTCCTAAC-----TGTCCCACACGGAC-AATGATGGTGCT-CTGGTCACCGCC-ATCTACATTGGCGGG---AGGCTGGACCCACAAAC------------------------------------------------------------------- Russula_paludosa_KP149049 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGAAAGTGAGCTCCTCTCAAATGAATTAGTGGGGTCCGCTTTGCTGATCCTTAACGTGATAAGATGCTTCTACGTTTTGGATCTAGCACTGTCCC-TTGGACGCCTGCTCCTAAC-----TGTCCCACACGGAC-AATGATGGTGCT-CTGGTCACCGCC-ATCTACATTGGCGGG---AGGCTGGACCCACAAAACGAAAACCTTGACCTCAAATC-GGGTGAGAC------------------------------------ Russula_paludosa_AY061703_ AAAAGTCGTAACAAGGTTTCCGTAGGTGAACCTGCGGAAGGATCATTATTGTACAACGGAGG.-.TGA-GGGCTGTCGCTGACC-TTC-AAAGGTCGTG-ACGCCCAA--GCACTTTCATACA-ATCCATCTCA-CCCCTTTGTGCATCACCGCGTGGGTCC--CCCTTGC-GGGAGGGCTCGCGTTTTCACATAAAA---CTCGATACAGTGTAGAATGTTCT--------------TTTGCGATCACACGCAATCAATACAACTTTCAACAATGGATCTCTTGGCTCTCGCATCGATGAAGAACGCAGCGAAATGCGATACGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCCCCTTGGCATTCCGAGGGGCACACCCGTTTGAGTGTCGTGAAATCCTCAAAAAC------------CCTTTTCCTGTCA-GGAATGGGATTTTTGGACTTGGAGGTTCAATGCTTGCCTTTCACTTTTGAAAGTGAGCTCCTCTCAAATGAATTAGTGGGGTCCGCTTTGCTGATCCTTAACGTGATAAGATGCTTCTACGTTTTGGATCTAGCACTGTCCC-TTGGATGCCTGCTCCTAAC-----TGTCCCACACGGAC-AATGATGGTGCT-CTGGTCACCGCC-ATCTACATTGGCGGG---AGGCTGGACCCACAAAACGAAAACCTTGACCTCAAATCGGGGTGAGACTACCCGCTGAACTTAAGCATATCAATAAGCGGAGGA Russula_paludosa_GU373485_ -----------------------------ACCTGCGG-AGGATCATTATTGTACAACGGAGGT-GTGA-GGGCTGTCGCTGACC-TTC-AAAGGTCGTGCACGCCCAA--GCACTTTCATACA-ATCCATCTCA-CCCCTTTGTGCATCACCGCGTGGGTCC--CCCTTGC-GGGAGGGCTCGCGTTTTCACATAAAA---CTCGATACAGTGTAGAATGTTCT--------------TTTGCGATCACACGCAATCAATACAACTTTCAACAATGGATCTCTTGGCTCTCGCATCGATGAAGAACGCAGCGAAATGCGATACGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCCCCTTGGCATTCCGAGGGGCACACCCGTTTGAGTGTCGTGAAATCCTCAAAAAC------------CCTTTTCCTGTCA-GGAATGGGATTTTTGGACTTGGAGGTTCAATGCTTGCCTTTCACTTTTGAAAGTGAGCTCCTCTCAAATGAATTAGTGGGGTCCGCTTTGCTGATCCTTAACGTGATAAGATGCTTCTACGTTTTGGATCTAGCACTGTCCC-TTGGATGCCTGCTCCTAAC-----TGTCCCACACGGAC-AATGATGGTGCT-CTGGTCACCGCC-ATCTACATTGGCGGG---AGGCTGGACCCACAAAACGAAAACCTTGACCTCAAATC-GGGTGAGACTACCCGCTGAACTTAAGCATATCAATAAGCCGGAGG Russula_paludosa_KP149060 AAAAGTCGTAACAAGGTTTCCGTAGGTGAACCTGCGGAAGGATCATTATTGTACAACGGAGGT-GTGA-GGGCTGTCGCTGACC-TTC-AAAGGTCGTGCACGCCCAA--GCACTTTCATACA-ATCCATCTCA-CCCCTTTGTGCATCACCGCGTGGGTCC--CCCTTGC-GGGAGGGCTCGCGTTTTCACATAAAA---CTCGATACAGTGTAGAATGTTCT--------------TTTGCGATCACACGCAATCAATACAACTTTCAACAACGGATCTCTTGGCTCTCGCATCGATGAAGAACGCAGCGAAATGCGATACGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCCCCTTGGCATTCCGAGGGGCACACCCGTTTGAGTGTCGTGAAATCCTCAAAAAC------------CCTTTTCCTGTCA-GGAATGGGATTTTTGGACTTGGAGGTTCAATGCTTGCCTTTCACTTTTGAAAGTGAGCTCCTCTCAAATGAATTAGTGGGGTCCGCTTTGCTGATCCTTAACGTGATAAGATGCTTCTACGTTTTGGATCTAGCACTGTCCC-TTGGACGCCTGCTCCTAAC-----TGTCCCACACGGAC-AATGATGGTGCT-CTGGTCACCGCC-ATCTACATTGGCGGG---AGGCTGGACCCACAAAACGAAAACCTTGACCTCAAATC-GGGTGAGACTACCCGCTGAACTTAAGCATACAA------------ Russula_Paludosa_KP149055 ---------------------------------------------------------GGAGGT-GTGA-GGGCTGTCGCTGACC-TTC-AAAGGTCGTGCACGCCCAA--GCACTTTCATACA-ATCCATCTCA-CCCCTTTGTGCATCACCGCGTGGGTCC--CCCTTGC-GGGAGGGCTCGCGTTTTCACATAAAA---CTCGATACAGTGTAGAATGTTCT--------------TTTGCGATCACACGCAATCAATACAACTTTCAACAACGGATCTCTTGGCTCTCGCATCGATGAAGAACGCAGCGAAATGCGATACGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCCCCTTGGCATTCCGAGGGGCACACCCGTTTGAGTGTCGTGAAATCCTCAAAAAC------------CCTTTTCCTGTCA-GGAATGGGATTTTTGGACTTGGAGGTTCAATGCTTGCCTTTCACTTTTGAAAGTGAGCTCCTCTCAAATGAATTAGTGGGGTCCGCTTTGCTGATCCTTAACGTGATAAGATGCTTCTACGTTTTGGATCTAGCACTGTCCC-TTGGACGCCTGCTCCTAAC-----TGTCCCACACGGAC-AATGATGGTGCT-CTGGTCACCGCC-ATCTACATTGGCGGG---AGGCTGGACCCACAAAACGAAAACCTTGACCTCAAATC-GGGTGAGACTACCCGCTGAACTTAAGCATATCAATA--------- Russula_paludosa_KP149057 ---------------------------GAACCTGCGGAAGGATCATTATTGTACAACGGAGGT-GTGA-GGGCTGTCGCTGACC-TTC-AAAGGTCGTGCACGCCCAA--GCACTTTCATACA-ATCCATCTCA-CCCCTTTGTGCATCACCGCGTGGGTCC--CCCTTGC-GGGAGGGCTCGCGTTTTCACATAAAA---CTCGATACAGTGTAGAATGTTCT--------------TTTGCGATCACACGCAATCAATACAACTTTCAACAACGGATCTCTTGGCTCTCGCATCGATGAAGAACGCAGCGAAATGCGATACGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCCCCTTGGCATTCCGAGGGGCACACCCGTTTGAGTGTCGTGAAATCCTCAAAAAC------------CCTTTTCCTGTCA-GGAATGGGATTTTTGGACTTGGAGGTTCAATGCTTGCCTTTCACTTTTGAAAGTGAGCTCCTCTCAAATGAATTAGTGGGGTCCGCTTTGCTGATCCTTAACGTGATAAGATGCTTCTACGTTTTGGATCTAGCACTGTCCC-TTGGACGCCTGCTCCTAAC-----TGTCCCACACGGAC-AATGATGGTGCT-CTGGTCACCGCC-ATCTACATTGGCGGG---AGGCTGGACCCACAAAACGAAAACCTTGACCTCAAATC-GGGTGAGACTACCCGCTGAACTTAAGCATATCAATA--------- Russula_paludosa_KP149066 AAAAAACGTAACAAGGTTTCCGTAGGTGAACCTGCGGAAGGATCATTATTGTACAACGGAGGT-GTGA-GGGCTGTCGCTGACC-TTC-AAAGGTCGTGCACGCCCAA--GCACTTTCATACA-ATCCATCTCA-CCCCTTTGTGCATCACCGCGTGGGTCC--CCCTTGC-GGGAGGGCTCGCGTTTTCACATAAAA---CTCGATACAGTGTAGAATGTTCT--------------TTTGCGATCACACGCAATCAATACAACTTTCAACAACGGATCTCTTGGCTCTCGCATCGATGAAGAACGCAGCGAAATGCGATACGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCCCCTTGGCATTCCGAGGGGCACACCCGTTTGAGTGTCGTGAAATCCTCAAAAAC------------CCTTTTCCTGTCA-GGAATGGGATTTTTGGACTTGGAGGTTCAATGCTTGCCTTTCACTTTTGAAAGTGAGCTCCTCTCAAATGAATTAGTGGGGTCCGCTTTGCTGATCCTTAACGTGATAAGATGCTTCTACGTTTTGGATCTAGCACTGTCCC-TTGGACGCCTGCTCCTAAC-----TGTCCCACACGGAC-AATGATGGTGCT-CTGGTCACCGCC-ATCTACATTGGCGGG---AGGCTGGACCCACAAAACGAAAACCTTGACCTCAAATC-GGGTGAGACTACCCGCTGAACTTAAGCATATCAAAACC------- Russula_paludosa_AJ971402 -------------------------GTGAACCTGCGGAAGGATCATTATTGTACAACGGAGGT-GTGA-GGGCTGTCGCTGACC-TTC-AAAGGTCGTGCACGCCCAA--GCACTTTCATACA-ATCCATCTCA-CCCCTTTGTGCATCACCGCGTGGGTCC--CCCTTGC-GGGAGGGCTCGCGTTTTCACATAAAA---CTCGATACAGTGTAGAATGTTCT--------------TTTGCGATCACACGCAATCAATACAACTTTCAACAACGGATCTCTTGGCTCTCGCATCGATGAAGAACGCAGCGAAATGCGATACGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCCCCTTGGCATTCCGAGGGGCACACCCGTTTGAGTGTCGTGAAATCCTCAAAAAC------------CCTTTTCCTGTCA-GGAATGGGATTTTTGGACTTGGAGGTTCAATGCTTGCCTTTCACTTTTGAAAGTGAGCTCCTCTCAAATGAATTAGTGGGGTCCGCTTTGCTGATCCTTAACGTGATAAGATGCTTCTACGTTTTGGATCTAGCACTGTCCC-TTGGACGCCTGCTCCTAAC-----TGTCCCACACGGAC-AATGATGGTGCT-CTGGTCACCGCC-ATCTACATTGGCGGG---AGGCTGGACCCACAAAACGAAAACCTTGACCTCAAATC-GGGTGAGACTACCCGCTGAACTTAAGCATATCAATAAGCGGAGGA Russula_paludosa_KP149061 AAAAGTCGTAACAAGGTTTCCGTAGGTGAACCTGCGGAAGGATCATTATTGTACAACGGAGGT-GTGA-GGGCTGTCGCTGACC-TTC-AAAGGTCGTGCACGCCCAA--GCACTTTCATACA-ATCCATCTCA-CCCCTTTGTGCATCACCGCGTGGGTCC--CCCTTGC-GGGAGGGCTCGCGTTTTCACATAAAA---CTCGATACAGTGTAGAATGTTCT--------------TTTGCGATCACACGCAATCAATACAACTTTCAACAACGGATCTCTTGGCTCTCGCATCGATGAAGAACGCAGCGAAATGCGATACGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCCCCTTGGCATTCCGAGGGGCACACCCGTTTGAGTGTCGTGAAATCCTCAAAAAC------------CCTTTTCCTGTCA-GGAATGGGATTTTTGGACTTGGAGGTTCAATGCTTGCCTTTCACTTTTGAAAGTGAGCTCCTCTCAAATGAATTAGTGGGGTCCGCTTTGCTGATCCTTAACGTGATAAGATGCTTCTACGTTTTGGATCTAGCACTGTCCC-TTGGACGCCTGCTCCTAAC-----TGTCCCACACGGAC-AATGATGGTGCT-CTGGTCACCGCC-ATCTACATTGGCGGG---AGGCTGGACCCACAAAACGAAAACCTTGACCTCAAATC-GGGTGAGACTACCCGCTGAACTTAAGCATATAAAAAGGGGGGGGG Russula_paludosa_KP149063 AAAAGTCGTAACAAGGTTTCCGTAGGTGAACCTGCGGAAGGATCATTATTGTACAACGGAGGT-GTGA-GGGCTGTCGCTGACC-TTC-AAAGGTCGTGCACGCCCAA--GCACTTTCATACA-ATCCATCTCA-CCCCTTTGTGCATCACCGCGTGGGTCC--CCCTTGC-GGGAGGGCTCGCGTTTTCACATAAAA---CTCGATACAGTGTAGAATGTTCT--------------TTTGCGATCACACGCAATCAATACAACTTTCAACAACGGATCTCTTGGCTCTCGCATCGATGAAGAACGCAGCGAAATGCGATACGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCCCCTTGGCATTCCGAGGGGCACACCCGTTTGAGTGTCGTGAAATCCTCAAAAAC------------CCTTTTCCTGTCA-GGAATGGGATTTTTGGACTTGGAGGTTCAATGCTTGCCTTTCACTTTTGAAAGTGAGCTCCTCTCAAATGAATTAGTGGGGTCCGCTTTGCTGATCCTTAACGTGATAAGATGCTTCTACGTTTTGGATCTAGCACTGTCCC-TTGGACGCCTGCTCCTAAC-----TGTCCCACACGGAC-AATGATGGTGCT-CTGGTCACCGCC-ATCTACATTGGCGGG---AGGCTGGACCCACAAAACGAAAACCTTGACCTCAAATC-GGGTGAGACTACCCGCTGAACTTAAGCATATCTGAAGGGGGGGGG Russula_paludosa_KP149064 AAAAGTCGTAACAAGGTTTCCGTAGGTGAACCTGCGGAAGGATCATTATTGTACAACGGAGGT-GTGA-GGGCTGTCGCTGACC-TTC-AAAGGTCGTGCACGCCCAA--GCACTTTCATACA-ATCCATCTCA-CCCCTTTGTGCATCACCGCGTGGGTCC--CCCTTGC-GGGAGGGCTCGCGTTTTCACATAAAA---CTCGATACAGTGTAGAATGTTCT--------------TTTGCGATCACACGCAATCAATACAACTTTCAACAACGGATCTCTTGGCTCTCGCATCGATGAAGAACGCAGCGAAATGCGATACGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCCCCTTGGCATTCCGAGGGGCACACCCGTTTGAGTGTCGTGAAATCCTCAAAAAC------------CCTTTTCCTGTCA-GGAATGGGATTTTTGGACTTGGAGGTTCAATGCTTGCCTTTCACTTTTGAAAGTGAGCTCCTCTCAAATGAATTAGTGGGGTCCGCTTTGCTGATCCTTAACGTGATAAGATGCTTCTACGTTTTGGATCTAGCACTGTCCC-TTGGACGCCTGCTCCTAAC-----TGTCCCACACGGAC-AATGATGGTGCT-CTGGTCACCGCC-ATCTACATTGGCGGG---AGGCTGGACCCACAAAACGAAAACCTTGACCTCAAATC-GGGTGAGACTACCCGCTGAACTTAAGCATACAAGAGGGGGGGAAG Russula_paludosa_UK_JQ888199 ----------------TTTCCGTAGGTGAACCTGCGGAAGGATCATTATTGTACAACGGAGGT-GTGA-GGGCTGTCGCTGACC-TTC-AAAGGTCGTGCACGCCCAA--GCACTTTCATACA-ATCCATCTCA-CCCCTTTGTGCATCACCGCGTGGGTCC--CCCTTGC-GGGAGGGCTCGCGTTTTCACATAAAA---CTCGATACAGTGTAGAATGTTCT--------------TTTGCGATCACACGCAATCAATACAACTTTCAACAACGGATCTCTTGGCTCTCGCATCGATGAAGAACGCAGCGAAATGCGATACGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCCCCTTGGCATTCCGAGGGGCACACCCGTTTGAGTGTCGTGAAATCCTCAAAAAC------------CCTTTTCCTGTCA-GGAATGGGATTTTTGGACTTGGAGGTTCAATGCTTGCCTTTCACTTTTGAAAGTGAGCTCCTCTCAAATGAATTAGTGGGGTCCGCTTTGCTGATCCTTAACGTGATAAGATGCTTCTACGTTTTGGATCTAGCACTGTCCC-TTGGACGCCTGCTCCTAAC-----TGTCCCACACGGAC-AATGATGGTGCT-CTGGTCACCGCC-ATCTACATTGGCGGG---AGGCTGGACCCACAAAACGAAAACCTTGACCTCAAATC---------------------------------------------- Russula_paludosa_KP149065 AAAAGTCGTAACAAGGTTTCCGTAGGTGAACCTGCGGAAGGATCATTATTGTACAACGGAGGT-GTGA-GGGCTGTCGCTGACC-TTC-AAAGGTCGTGCACGCCCAA--GCACTTTCATACA-ATCCATCTCA-CCCCTTTGTGCATCACCGCGTGGGTCC--CCCTTGC-GGGAGGGCTCGCGTTTTCACATAAAA---CTCGATACAGTGTAGAATGTTCT--------------TTTGCGATCACACGCAATCAATACAACTTTCAACAACGGATCTCTTGGCTCTCGCATCGATGAAGAACGCAGCGAAATGCGATACGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCCCCTTGGCATTCCGAGGGGCACACCCGTTTGAGTGTCGTGAAATCCTCAAAAAC------------CCTTTTCCTGTCA-GGAATGGGATTTTTGGACTTGGAGGTTCAATGCTTGCCTTTCACTTTTGAAAGTGAGCTCCTCTCAAATGAATTAGTGGGGTCCGCTTTGCTGATCCTTAACGTGATAAGATGCTTCTACGTTTTGGATCTAGCACTGTCCC-TTGGACGCCTGCTCCTAAC-----TGTCCCACACGGAC-AATGATGGTGCT-CTGGTCACCGCC-ATCTACATTGGCGGG---AGGCTGGACCCACAAAACGAAAACCTTGACCTCAAATC-GGGTGAGACTACCCGCTGAACTTAAGCATACAAAAGGGGGGGGGA Russula_paludosa_AJ971400 --------------GGTTTCCGTAGGTGAACCTGCGGAAGGATCATTATTGTACAACGGAGGT-GTGA-GGGCTGTCGCTGACC-TTC-AAAGGTCGTGCACGCCCAA--GCACTTTCATACA-ATCCATCTCA-CCCCTTTGTGCATCACCGCGTGGGTCC--CCCTTGC-GGGAGGGCTCGCGTTTTCACATAAAA---CTCGATACAGTGTAGAATGTTCT--------------TTTGCGATCACACGCAATCAATACAACTTTCAACAACGGATCTCTTGGCTCTCGCATCGATGAAGAACGCAGCGAAATGCGATACGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCCCCTTGGCATTCCGAGGGGCACACCCGTTTGAGTGTCGTGAAATCCTCAAAAAC------------CCTTTTCCTGTCA-GGAATGGGATTTTTGGACTTGGAGGTTCAATGCTTGCCTTTCACTTTTGAAAGTGAGCTCCTCTCAAATGAATTAGTGGGGTCCGCTTTGCTGATCCTTAACGTGATAAGATGCTTCTACGTTTTGGATCTAGCACTGTCCC-TTGGACGCCTGCTCCTAAC-----TGTCCCACACGGAC-AATGATGGTGCT-CTGGTCACCGCC-ATCTACATTGGCGGG---AGGCTGGACCCACAAAACGAAAACCTTGACCTCAAATC-GGG------------------------------------------ Russula_paludosa_JX029923 AAAAGTCGTAACAAGGTTTCCGTAGGTGAACCTGCGGAAGGATCATTATTGTACAACGGAGGT-GTGA-GGGCTGTCGCTGACC-TTC-AAAGGTCGTGCACGCCCAA--GCACTTTCATACA-ATCCATCTCA-CCCCTTTGTGCATCACCGCGTGGGTCC--CCCTTGC-GGGAGGGCTCGCGTTTTCACATAAAA---CTCGATACAGTGTAGAATGTTCT--------------TTTGCGATCACACGCAATCAATACAACTTTCAACAACGGATCTCTTGGCTCTCGCATCGATGAAGAACGCAGCGAAATGCGATACGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCCCCTTGGCATTCCGAGGGGCACACCCGTTTGAGTGTCGTGAAATCCTCAAAAAC------------CCTTTTCCTGTCA-GGAATGGGATTTTTGGACTTGGAGGTTCAATGCTTGCCTTTCACTTTTGAAAGTGAGCTCCTCTCAAATGAATTAGTGGGGTCCGCTTTGCTGATCCTTAACGTGATAAGATGCTTCTACGTTTTGGATCTAGCACTGTCCC-TTGGACGCCTGCTCCTAAC-----TGTCCCACACGGAC-AATGATGGTGCT-CTGGTCACCGCC-ATCTACATTGGCGGG---AGGCTGGACCCACAAAACGAAAACCTTGACCTCAAATC-GGGTGAGACTACCCGCTGAACTTAA-------------------- Russula_paludosa_KP149050 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGAAAGTGAGCTCCTCTCAAATGAATTAGTGGGGTCCGCTTTGCTGATCCTTAACGTGATAAGATGCTTCTACGTTTTGGATCTAGCACTGTCCC-TTGGACGCCTGCTCCTAAC-----TGTCCCACACGGAC-AATGATGGTGCT-CTGGTCACCGCC-ATCTACATTGGCGGG---AGGCTGGACCCACAAAACGAAAACCTTGACCTCAAATC-GGGTGAGAC------------------------------------ Russula_paludosa_KP149051 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCACACCCGTTTGAGTGTCGTGAAATCCTCAAAAAC------------CCTTTTCCTGTCA-GGAATGGGATTTTTGGACTTGGAGGTTCAATGCTTGCCTTTCACTTTTGAAAGTGAGCTCCTCTCAAATGAATTAGTGGGGTCCGCTTTGCTGATCCTTAACGTGATAAGATGCTTCTACGTTTTGGATCTAGCACTGTCCC-TTGGACGCCTGCTCCTAAC-----TGTCCCACACGGAC-AATGATGGTGCT-CTGGTCACCGCC-ATCTACATTGGCGGG---AGGCTGGACCCACAAAACGAAAACCTTGACCTCAAATC-GGGTGAGAC------------------------------------ Russula_paludosa_KP149053 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGAAAGTGAGCTCCTCTCAAATGAATTAGTGGGGTCCGCTTTGCTGATCCTTAACGTGATAAGATGCTTCTACGTTTTGGATCTAGCACTGTCCC-TTGGACGCCTGCTCCTAAC-----TGTCCCACACGGAC-AATGATGGTGCT-CTGGTCACCGCC-ATCTACATTGGCGGG---AGGCTGGACCCACAAAACGAAAACCTTGACCTCAAATC-GGGTGAGAC------------------------------------ Russula_paludosa_JF908659_ ---------------------------------------------TTATTGTACAACGGAGGT-GTGA-GGGCTGTCGCTGACC-TTC-AAAGGTCGTGCACGCCCAA--GCACTTTCATACA-ATCCATCTCA-CCCCTTTGTGCATCACCGCGTGGGTCC--CCCTTGC-GGGAGGGCTCGCGTTTTCACATAAAA---CTCGATACAGTGTAGAATGTTCT--------------TTTGCGATCACACGCAATCAATACAACTTTCAACAACGGATCTCTTGGCTCTCGCATCGATGAAGAACGCAGCGAAATGCGATACGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCCCCTTGGCATTCCGAGGGGCACACCCGTTTGAGTGTCGTGAAATCCTCAAAAAC------------CCTTTTCCTGTCA-GGAATGGGATTTTTGGACTTGGAGGTTCAATGCTTGCCTTTCACTTTTGAAAGTGAGCTCCTCTCAAATGAATTAGTGGGGTCCGCTTTGCTGATCCTTAACGTGATAAGATGCTTCTACGTTTTGGATCTAGCACTGTCCC-TTGGACGCCTGCTCCTAAC-----TGTCCCACACGGAC-AATGATGGTGCT-CTGGTCACCGCC-ATCTACATTGGCGGG---AGGCTGGACCCACAAAACGAAAACCTTGACCTCAAATC-GGGTGAGACTACCCGCTGAACTTAA-------------------- ; END; begin paup; outgroup 1; charset its = 1 -768; charset excludeset1 = 1 -35 64 -64 69 -69 85 -85 89 -89 109 -110 123 -124 135 -135 163 -164 172 -172 199 -201 225 -238 433 -444 458 -458 601 -601 621 -625 640 -640 653 -653 666 -666 682 -684 702 -702 723 -723 733 -768; ; END; BEGIN ASSUMPTIONS; TYPESET * UNTITLED = unord: 1 - 768; END; BEGIN CODONS; CODESET * UNTITLED = universal: 1 - 768; END; BEGIN MESQUITECHARMODELS; ProbModelSet * UNTITLED = 'Jukes-Cantor': 1 - 768; END; BEGIN TREES; Title 'Trees from "Russula-paludosa-ITScontrees"'; LINK Taxa = Taxa; TRANSLATE [0] 1 Russula_compacta_EU598157_outgroup, [1] 2 Russula_risigallina_AY061713_, [2] 3 Russula_risigallina_DQ422022, [3] 4 Russula_amoenipes_AY061656, [4] 5 Russula_cuprea_AY061667_, [5] 6 Russula_velenovskyi_AY061721_, [6] 7 Russula_integra_AY061683, [7] 8 Russula_integriformis_AY061684_, [8] 9 Russula_decolorans_AY061670, [9] 10 Russula_decolorans_KP149062, [10] 11 Russula_decolorans_AY194601, [11] 12 Russula_decolorans_FJ845432_, [12] 13 Russula_xerampelina_DQ367916_, [13] 14 Russula_xerampelina_JF899571_, [14] 15 Russula_paludosa_KJ705227_, [15] 16 Russula_paludosa_KF007950_, [16] 17 Russula_paludosa_KP149048, [17] 18 Russula_paludosa_KP149049, [18] 19 Russula_paludosa_AY061703_, [19] 20 Russula_paludosa_GU373485_, [20] 21 Russula_paludosa_KP149060, [21] 22 Russula_Paludosa_KP149055, [22] 23 Russula_paludosa_KP149057, [23] 24 Russula_paludosa_KP149066, [24] 25 Russula_paludosa_AJ971402, [25] 26 Russula_paludosa_KP149061, [26] 27 Russula_paludosa_KP149063, [27] 28 Russula_paludosa_KP149064, [28] 29 Russula_paludosa_UK_JQ888199, [29] 30 Russula_paludosa_KP149065, [30] 31 Russula_paludosa_AJ971400, [31] 32 Russula_paludosa_JX029923, [32] 33 Russula_paludosa_KP149050, [33] 34 Russula_paludosa_KP149051, [34] 35 Russula_paludosa_KP149053, [35] 36 Russula_paludosa_JF908659_; TREE Strict = (1,((2,3),((13,14),((15,16),((17,18,21,22,23,24,25,26,27,28,29,30,31,32,33,34,35,36),(19,20))))),4,5,(6,(7,8)),(9,10,11),12); END; Begin MESQUITE; MESQUITESCRIPTVERSION 2; TITLE AUTO; tell ProjectCoordinator; timeSaved 1425970379145; getEmployee #mesquite.minimal.ManageTaxa.ManageTaxa; tell It; setID 0 5504461451396345402; endTell; getEmployee #mesquite.charMatrices.ManageCharacters.ManageCharacters; tell It; setID 0 3488750427051256506; mqVersion 302; checksumv 0 3 3669132887 null getNumChars 768 numChars 768 getNumTaxa 36 numTaxa 36 short true bits 2305843009213693967 states 15 sumSquaresStatesOnly 500053.0 sumSquares -4.150517416584639E19 longCompressibleToShort false usingShortMatrix true NumFiles 1 NumMatrices 1; mqVersion; endTell; getWindow; tell It; suppress; setResourcesState false false 100; setPopoutState 400; setExplanationSize 0; setAnnotationSize 0; setFontIncAnnot 0; setFontIncExp 0; setSize 804 590; setLocation 1037 246; setFont SanSerif; setFontSize 10; getToolPalette; tell It; endTell; desuppress; endTell; getEmployee #mesquite.trees.BasicTreeWindowCoord.BasicTreeWindowCoord; tell It; makeTreeWindow #5504461451396345402 #mesquite.trees.BasicTreeWindowMaker.BasicTreeWindowMaker; tell It; suppressEPCResponse; setTreeSource #mesquite.trees.StoredTrees.StoredTrees; tell It; setTreeBlock 1; toggleUseWeights off; endTell; setAssignedID 934.1425970294405.5970821006848613672; getTreeWindow; tell It; setExplanationSize 30; setAnnotationSize 20; setFontIncAnnot 0; setFontIncExp 0; setSize 704 518; setLocation 1037 246; setFont SanSerif; setFontSize 10; getToolPalette; tell It; endTell; setActive; getTreeDrawCoordinator #mesquite.trees.BasicTreeDrawCoordinator.BasicTreeDrawCoordinator; tell It; suppress; setTreeDrawer #mesquite.trees.SquareLineTree.SquareLineTree; tell It; setNodeLocs #mesquite.trees.NodeLocsStandard.NodeLocsStandard; tell It; branchLengthsToggle off; toggleScale on; toggleBroadScale off; toggleCenter on; toggleEven on; setFixedTaxonDistance 0; endTell; setEdgeWidth 4; showEdgeLines on; orientUp; endTell; setBackground White; setBranchColor Black; showNodeNumbers off; showBranchColors on; labelBranchLengths off; centerBrLenLabels on; showBrLensUnspecified on; showBrLenLabelsOnTerminals on; setBrLenLabelColor 0 0 255; setNumBrLenDecimals 6; desuppress; getEmployee #mesquite.trees.BasicDrawTaxonNames.BasicDrawTaxonNames; tell It; setColor Black; toggleColorPartition off; toggleColorAssigned on; toggleShadePartition off; toggleShowFootnotes on; toggleNodeLabels on; toggleCenterNodeNames off; toggleShowNames on; namesAngle ?; endTell; endTell; setTreeNumber 1; setDrawingSizeMode 0; toggleLegendFloat on; scale 0; toggleTextOnTree off; showWindow; endTell; desuppressEPCResponse; getEmployee #mesquite.trees.ColorBranches.ColorBranches; tell It; setColor Red; removeColor off; endTell; getEmployee #mesquite.ornamental.BranchNotes.BranchNotes; tell It; setAlwaysOn off; endTell; getEmployee #mesquite.ornamental.ColorTreeByPartition.ColorTreeByPartition; tell It; colorByPartition off; endTell; getEmployee #mesquite.ornamental.DrawTreeAssocDoubles.DrawTreeAssocDoubles; tell It; setOn on; toggleShow consensusFrequency; setDigits 4; writeAsPercentage off; toggleCentred off; toggleHorizontal on; toggleWhiteEdges on; setFontSize 10; setOffset 0 0; endTell; getEmployee #mesquite.ornamental.DrawTreeAssocStrings.DrawTreeAssocStrings; tell It; setOn on; toggleCentred on; toggleHorizontal on; setFontSize 10; setOffset 0 0; endTell; getEmployee #mesquite.trees.TreeInfoValues.TreeInfoValues; tell It; panelOpen false; endTell; endTell; endTell; getEmployee #mesquite.charMatrices.BasicDataWindowCoord.BasicDataWindowCoord; tell It; showDataWindow #3488750427051256506 #mesquite.charMatrices.BasicDataWindowMaker.BasicDataWindowMaker; tell It; getWindow; tell It; getTable; tell It; rowNamesWidth 358; endTell; setExplanationSize 30; setAnnotationSize 20; setFontIncAnnot 0; setFontIncExp 0; setSize 704 518; setLocation 1037 246; setFont SanSerif; setFontSize 10; getToolPalette; tell It; setTool mesquite.charMatrices.BasicDataWindowMaker.BasicDataWindow.ibeam; endTell; setTool mesquite.charMatrices.BasicDataWindowMaker.BasicDataWindow.ibeam; colorCells #mesquite.charMatrices.ColorByState.ColorByState; tell It; setStateLimit 9; toggleUniformMaximum on; endTell; colorRowNames #mesquite.charMatrices.TaxonGroupColor.TaxonGroupColor; colorColumnNames #mesquite.charMatrices.CharGroupColor.CharGroupColor; colorText #mesquite.charMatrices.NoColor.NoColor; setBackground White; toggleShowNames on; toggleShowTaxonNames on; toggleTight off; toggleThinRows off; toggleShowChanges off; toggleSeparateLines off; toggleShowStates on; toggleAutoWCharNames off; toggleAutoTaxonNames off; toggleShowDefaultCharNames off; toggleConstrainCW on; toggleBirdsEye off; toggleShowPaleGrid off; toggleShowPaleCellColors off; toggleShowPaleExcluded off; togglePaleInapplicable on; toggleShowBoldCellText off; toggleAllowAutosize off; toggleColorsPanel off; toggleLinkedScrolling on; toggleScrollLinkedTables off; endTell; showWindow; getWindow; tell It; forceAutosize; endTell; getEmployee #mesquite.charMatrices.ColorCells.ColorCells; tell It; setColor Red; removeColor off; endTell; getEmployee #mesquite.categ.StateNamesStrip.StateNamesStrip; tell It; showStrip off; endTell; getEmployee #mesquite.charMatrices.AnnotPanel.AnnotPanel; tell It; togglePanel off; endTell; getEmployee #mesquite.charMatrices.CharReferenceStrip.CharReferenceStrip; tell It; showStrip off; endTell; getEmployee #mesquite.charMatrices.QuickKeySelector.QuickKeySelector; tell It; autotabOff; endTell; getEmployee #mesquite.charMatrices.SelSummaryStrip.SelSummaryStrip; tell It; showStrip off; endTell; getEmployee #mesquite.align.AlignToDropped.AlignToDropped; tell It; gapCosts 8 3 2 2; subCosts 10 5 10 10 10 5 5 10 10 10 5 10; endTell; getEmployee #mesquite.molec.ColorByAA.ColorByAA; tell It; emphasizeDegeneracy off; endTell; getEmployee #mesquite.molec.SequenceInfoEditor.SequenceInfoEditor; tell It; panelOpen false; endTell; endTell; endTell; endTell; end;