#NEXUS [written Mon Mar 23 15:17:44 JST 2015 by Mesquite version 2.75 (build 566) at KAGEYAMA-SHARE/127.0.0.1] BEGIN TAXA; TITLE clade_6_taxa_list; DIMENSIONS NTAX=14; TAXLABELS Phytophthora_inundata CH97TUL1 CH97TUL22 CH97TUL2 Phytophthora_asparagi Phytophthora_gibbosa Phytophthora_gonapodyides Phytophthora_gregata Phytophthora_humicola Phytophthora_litoralis Phytophthora_megasperma Phytophthora_pinifolia Phytophthora_rosacearum Phytophthora_sojae ; END; BEGIN CHARACTERS; TITLE clade6_Character_Matrix; DIMENSIONS NCHAR=2997; FORMAT DATATYPE = DNA GAP = - MISSING = ?; MATRIX Phytophthora_inundata CCACACCTAAAAACTTTCCACGTGAACCGTATCAACCCCTATTGGGAGCTTGCTCCGGCGTGCGTGCTGGCCTGTAAGTCGGCGGCTGCTGCTGGGCGGGCTCTATCGCGAGCGTTTGGGCTTCGGCTCGAGCTAGTAGCTTTTTTAAACCCCTTCTTAATTACTGAAATACTGTGGGGACGAAAGTCTCTGCTTTTAACTAGATAGCAACTTTCAGCAGTGGATGTCTAGGCTCGCACATCGATGAAGAACGCTGCGAACTGCGATACGTAATGCGAATTGCAGGATTCAGTGAGTCATCGAAATTTTGAACGCATATTGCACTTCCGGGTTCGTCCTGGAAGTATGCCTGTATCAGTGTCCGTACATCAACCTTGGTTTTCTTCCTTCCGTGTAGTCGGTGGAGGATATGCCAGACGTGAAGTGTCTTGCTAGCGGTCTTTCGAGCTGCCGGCGAGTCCTTTGAAATGTACTGAACTGTACTTCTCTTTGCTCGAAAAGCGTGGCGTTGCTGGTTGTGGAGGCTGCCCGTATGGCCAGTCGGCGACCGGTTTGTTAGCTGTAGTATCTGGAGGAGTGTTCGATTCGCGGTATGGTTGGCTTCGGCTGAACAATCTGCTTATTGGGTGCTTTTCCTGCTATGGCGGTACAAACTGGTGAACCGTAGCTGTGTGGCTTGGCTTTTGAATCGGCTTTGCTTGCGAAGTAGAGTGGCGGCTTCGGCTGCCGAGGGTCGATCATTTTGGGAAATTTGTGTGTGCGGCTTGCTGCGCGATTGACGCCCCTGGCCACCGTGACTTCATCAAGAACATGATCACGGGTACCTCGCAGGCTGACTGCGCCATTCTGGTGGTCGCTTCGGGTGTGGGCGAGTTCGAGGCTGGTATCTCYAAGGAGGGCCAGACGCGCGAGCACGCTCTGCTTGCCTTCACCCTGGGTGTGAAGCAGATGATCGTCGCCATCAACAAGATGGACGACTCGTCTGTCATGTACGGCCAGGCCCGTTACGAGGAGATCAAGTCGGAGGTCACCACGTACCTGAAGAAGGTCGGCTACAAGCCCGCCAAGATCCCCTTCGTGCCCATCTCGGGCTGGGAGGGTGACAACATGATCGACCGCTCGGCGAACATGCCGTGGTACAAGGGACCCTTCCTCCTTGAGGCTCTTGACAACCTGAACGCCCCCAAGCGTCCGTCGGACAAGCCTCTTCGTCTGCCCCTCCAGGACGTGTACAAGATCGGCGGTATCGGCACGGTACCGGTCGGCCGTGTCGAGACGGGTGTGATCAAGCCCGGCATGGTCGCCACCTTCGGCCCCGTGGGTCTGTCCACGGAAGTCAAGTCCGTTGAGATGCACCACGAGTCGCTGGCGGAGGCTGTCCCCGGTGACAACGTTGGCTTCAACGTCAAGAACGTGTCGGTCAAGGAGCTGCGTCGTGGATTCGTCGCCTCGGACTCCAAGAACGAYCCGGCCAAGGCCACCCAGGACTTCACCGCCCAGGTGATCGTGCTGAACCACCCCGGCCAGATCGGCAACGGCTACTCGCCGGTGCTTGACTGCCACACGGCCCACGTTGCTTGCAAGTTCAAAGAGATCATCGAGAAGATGGACCGTCGTTCGGGCAAGATTCGAGATTATCACTTTTAATCCGAATGGAATTAGCACAACCTGGTAATCAAATTTTTATGGGAAATCATCAATTATATAATGTTATTGTTACAGCACACGCTTTTATTATGGTTTTCTTTTTAGTTATGCCTGCTTTAATTGGTGGTTTTGGTAATTGGTTTGTTCCTTTAATGATAGGAGCACCTGATATGGCTTTTCCACGTATGAATAATATTAGTTTTTGGTTATTACCACCAGCTTTATTATTATTAGTATCATCAGCTATTGTTGAATCAGGTGCGGGTACTGGTTGGACTGTTTATCCACCTTTATCAAGTGTACAGGCACACTCAGGACCTTCTGTAGATTTAGCTATTTTTAGTTTACATTTAACAGGTATTTCATCATTATTAGGTGCTATTAATTTTATTTCAACAATTTATAATATGAGAGCTCCAGGTTTAAGTTTTCATAGATTACCTTTATTTGTTTGGTCTGTATTAATTACAGCTTTTCTTTTATTATTAACATTACCTGTATTAGCTGGTGCAATTACTATGTTATTAACTGATAGAAATTTAAATACTTCTTTTTATGATCCATCTGGGGGGGGTGATCCGGTATTATATCAATCACGCACTCGCTCGGTGGCGGTACCGGCTCCGGTATGGGCACGCTTCTTATTTCGAAGATCCGTGAAGAGTACCCGGACCGTATCATGTGCACGTACTCGGTGTGCCCGTCGCCCAAGGTGTCTGACACCGTCGTGGAGCCCTACAACGCTACGCTGTCGGTGCACCAGCTGGTCGAGAACGCCGACGAGGTCATGTGCTTGGATAACGAGGCCCTGTACGACATTTGCTTCCGTACGCTGAAGCTCACTACTCCYACCTACGGCGACCTGAACCACCTGGTGTGCGCCGCCATGTCGGGCATCACCACGTGCCTGCGATTCCCCGGTCAGCTGAACTCGGATCTGCGTAAGCTAGCCGTGAACCTGATCCCGTTCCCGCGTCTTCACTTCTTCATGATTGGTTTCGCCCCGCTGACGTCCCGTGGCTCGCAGCAGTACCGTGCCCTGACGGTGCCCGAGCTGACGCAGCAGCAGTTCGACGCCAAGAACATGATGTGCGCCGCCGACCCGCGTCACGGCCGTTATTTAACTGCAGCGTGTATGTTCCGCGGACGTATGAGCACGAAGGAGGTGGATGAGCAAATGCTGAATGTGCAGAACAAGAACTCGTCATACTTCGTCGAGTGGATCCCCAACAACATCAAGGCCAGCGTGTGTGACATTCCGCCCAAGGGACTCAAGATGAGCACCACGTTCATCGGTAACTCGACCGCCATCCAGGAGATGTTCAAGCGCGTGTCCGAGCAGTTCACGGC CH97TUL1 CCACACCTAAAAACTTTCCACGTGAACCGTATCAACCCCTATTGGGGGCTTGTTTCGGCGTGCGTGCTGGCCTGTTAGTCGGCGGCTGCTGCTGGGCGGGCTCTATCGCGATCGTTTGGGCTTCGGCTCGAGCGAGTAGCTTTTTTAAACCCATTCTTAATTACTGAAATACTGTGGGGACGAAAGTCTCTGCTTTTAACTAGATAGCAACTTTCAGCAGTGGATGTCTAGGCTCGCACATCGATGAAGAACGCTGCGAACTGCGATACGTAATGCGAATTGCAGGATTCAGTGAGTCATCGAAATTTTGAACGCATATTGCACTTCCGGGTTAGTCCTGGGAGTATGCCTGTATCAGTGTCCGTACATCAACCTTGGTTTTCTTCCTTCCGTGTAGTCGGTGGAGGATATGCCAGACGTGAAGTGTCTTGCTGGCGGTCTTTCGAGCTGCCGGCGAGTCCTTTGAAATGTACTGAACTGTACTTCTCTTTGCTCGAAAAGCGTGGCGTTGCTGGTTGTGGAGGCTGCCTATATGGCCAGTCGGCGACCGGTTTGTTAGCTGTAGTGTTTGGAGGAGTGTTCGATTCGCGGTATGGTTGGCTTCGGCTGAACAATCTGCTTATTGGGTGTTTTTCCTGCTATGGCGGTACAAACTGGTGAACCGTAGCTGTGTGGTTTGGCTTTTGAATCGGCTTTGCTTGCGAAGTAGAGTGGCGGCTTCGGCTGCCGAGGGTCGATCCATTTGGGAAATTTGTGTGTGCAGCTTGCTGCGCAATTGACGCCCCCGGTCACCGTGACTTCATCAAGAACATGATCACGGGTACCTCGCAGGCTGACTGCGCCATTCTGGTGGTCGCCTCGGGTGTGGGCGAGTTCGAGGCTGGTATCTCCAAGGAGGGCCAGACGCGCGAGCACGCGCTGCTCGCCTTCACCCTGGGTGTGAAGCAGATGATCGTCGCCATCAACAAGATGGACGACTCGTCTGTCATGTACGGCCAGGCCCGTTACGAGGAGATCAAGTCGGAGGTCACCACGTACCTGAAGAAGGTTGGCTACAAGCCCGCCAAGATCCCCTTCGTGCCCATCTCGGGCTGGGAGGGTGACAACATGATCGACCGCTCGACCAACATGCCGTGGTACAAGGGACCCTTCCTCCTCGAGGCTCTTGACCTGCTGAACGCCCCCAAGCGTCCGTCGGACAAGCCTCTGCGTCTGCCCCTCCAGGACGTGTACAAGATCGGCGGTATCGGCACGGTACCGGTCGGCCGTGTCGAGACGGGTGTGATCAAGCCCGGCATGATCGCCACCTTCGGCCCCGTGGGTCTGTCCACTGAAGTCAAGTCCGTTGAGATGCACCACGAGTCGCTSGCGGAGGCTGTCCCCGGTGACAACGTTGGCTTCAACGTCAAGAACGTGTCGGTCAAGGAGCTGCGTCGTGGATTCGTCGCCTCGGACTCYAAGAACGACCCGGCCAAGGCCACGCAGGACTTCACCGCCCAGGTGATTGTGCTGAACCACCCCGGCCAGATCGGCAACGGCTACTCGCCGGTGCTTGACTGCCACACGGCCCACGTTGCCTGCAAGTTCAAAGAGATCATTGAGAAGATGGACCGTCGTTCGGGCAAGGTGCGAGATTATCACTTTTAATACGAATGGAATTAGCACAACCAGGTAATCAAATTTTTATGGGAAATCATCAATTATATAATGTTATTGTTACAGCACACGCTTTTATTATGGTTTTCTTTTTAGTTATGCCTGCTTTAATTGGTGGTTTTGGTAACTGGTTTGTTCCTTTAATGATAGGTGCACCTGATATGGCTTTCCCACGTATGAATAATATTAGTTTTTGGTTATTACCACCAGCTTTATTATTATTAGTATCATCAGCTATTGTTGAATCTGGTGCTGGTACCGGCTGGACAGTTTATCCACCTTTATCAAGTGTACAAGCACACTCAGGACCTTCAGTAGATTTAGCTATTTTTAGTTTACATTTAACAGGTATTTCATCATTATTAGGTGCTATTAATTTTATTTCAACTATTTATAATATGCGAGCTCCTGGTTTAAGTTTTCATAGATTACCTTTATTTGTTTGGTCTGTATTAATTACAGCTTTTCTTTTATTATTAACATTACCTGTATTAGCGGGTGCCATCACAATGTTATTAACTGATAGAAATTTAAATACTTCTTTTTATGACCCATCTGGGGGGGGAGATCCCGTATTATATCAATCACGCACTCGCTCGGTGGCGGTACCGGCTCCGGTATGGGCACGCTTCTTATTTCCAAGATCCGTGAAGAGTACCCGGACCGTATCATGTGCACGTACTCGGTGTGCCCGTCGCCCAAGGTGTCGGACACAGTCGTGGAGCCCTACAACGCTACGCTGTCGGTGCACCAGCTGGTTGAGAATGCCGATGAGGTCATGTGCCTGGATAACGAGGCCCTGTACGACATTTGCTTCCGCACGCTGAAGCTCACGACCCCCACCTACGGTGACCTGAACCACCTGGTGTGCGCCGCCATGTCGGGCATCACCACGTGCCTGCGTTTCCCGGGTCAGTTGAACTCGGACCTGCGCAAGCTGGCCGTGAACCTGATCCCATTCCCGCGTCTCCACTTCTTCATGATCGGTTTCGCCCCGCTGACGTCGCGTGGCTCGCAGCAGTACCGTGCCCTGACGGTGCCCGAGCTGACGCAGCAGCAGTTCGACGCCAAGAACATGATGTGCGCCGCCGACCCGCGCCACGGCCGCTATTTAACTGCCGCGTGTATGTTCCGCGGACGTATGAGCACGAAGGAGGTGGACGAGCAGATGCTGAACGTGCAGAACAAAAACTCGTCGTACTTCGTCGAGTGGATCCCCAACAACATCAAGGCTAGCGTGTGTGACATCCCGCCCAAGGGCCTCAAGATGAGCACCACGTTCATCGGTAACTCGACCGCCATCCAGGAGATGTTCAAGCGCGTGTCCGAGCAGTTCACGGC CH97TUL22 CCACACCTAAAAACTTTCCACGTGAACCGTATCAACCCCTATTGGGGGCTTGCTCCGGCGTGCGTGCTGGCCTGTAAGTCGGCGGCTGCTGCTGGGCGGGCTCTATCGCGAGCGTTTGGGCTTCGGCTCGAGCTAGTAGCTTTTTTAAACCCATTCTTAAATACTGAAATACTGTGGGGACGAAAGTCTCTGCTTTTAACTAGATAGCAACTTTCAGCAGTGGATGTCTAGGCTCGCACATCGATGAAGAACGCTGCGAACTGCGATACGTAATGCGAATTGCAGGATTCAGTGAGTCATCGAAATTTTGAACGCATATTGCACTTCCGGGTTAGTCCTGGGAGTATGCCTGTATCAGTGTCCGTACATCAACCTTGGTTTTCTTCCTTCCGTGTAGTCGGTGGAGGATATGCCAGACGTGAAGTGTCTTGCTGGCGGTCTTTCGAGCTGCCGGTGAGTCCTTTGAAATGTACTGAACTGTACTTCTCTTTGCTCGAAAAGCGTGGCGTTGCTGGTTGTGGAGGCTGCCCGTGTGGCTTGTCGGCGACCGGTTTGTTAGCTGTGACGTTTGGAGGAGTGTTCGATTCGCGGTATGGTTGGCTTCGGCTGAACAATCTGCTTATTGGGTGCTTTTCCTGTCATGGCGGTGCGAACTGGTGAACCGTAGTCATGTGGTTTGGCTTTTGAATCGGTTTTGCTTGCGAAGTAGTGTGGCGGCTTCGGCTGTCGAGGGTCGATCCATTTGGGAAACTTGTGTGTGCGGCTTGCTGCGCAATTGACGCCCCTGGCCACCGTGACTTCATCAAGAACATGATCACGGGCACCTCGCAGGCTGACTGCGCCATTCTGGTGGTCGCCTCGGGTGTGGGCGAGTTCGAGGCTGGTATCTCCAAGGAGGGCCAGACGCGCGAGCACGCTCTGCTTGCTTTCACCCTGGGTGTGAAGCAGATGATCGTGGCCATCAACAAGATGGACGACTCGTCTGTCATGTACGGCCAGGCCCGTTACGAGGAGATCAAGGCTGAGGTCACCACCTACCTGAAGAAGGTCGGCTACAAGCCCGCCAAGATCCCGTTCGTGCCCATTTCGGGCTGGGAGGGTGACAACATGATTGACCGTTCGGCCAACATGCCGTGGTACAAGGGACCYTTCCTCCTCGAGGCTCTTGACAACCTGAACGCCCCCAAGCGTCCGTCGGACAAGCCTCTGCGTCTGCCCCTCCAGGATGTGTACAAGATCGGCGGTATCGGCACGGTACCGGTCGGCCGTGTCGAGACGGGTGTCATCAAGCCCGGCATGGTCGCCACCTTCGGCCCCGTGGGTCTGTCGACGGAAGTTAAGTCCGTTGAGATGCACCACGAGTCTCTGCCGGAGGCTGTCCCCGGTGACAACGTTGGCTTCAACGTCAAGAACGTGTCGGTCAAGGAGCTGCGTCGTGGATTCGTCGCTTCGGACTCCAAGAACGACCCGGCCAAGGCCACCCAGGACTTCACCGCCCAGGTGATCGTGCTGAACCACCCCGGCCAGATCGGCAACGGCTACTCGCCGGTGCTTGACTGCCACACGGCCCACGTTGCCTGCAAGTTCAAAGAGATCATCGAGAAGATGGACCGTCGTTCGGGCAAGGTGCGAGATTATCACTTTTAATTCGTATGGAATTAGCACAACCCGGTAATCAAATTTTTATGGGAAATCATCAATTATATAATGTTGTTGTTACTGCACATGCTTTTATTATGGTTTTCTTTTTAGTTATGCCTGCTTTAATTGGTGGTTTTGGTAATTGGTTTGTTCCTTTAATGATTGGGGCACCTGATATGGCTTTTCCTCGTATGAATAATATTAGTTTTTGGTTATTACCACCCGCTTTATTATTATTAGTATCATCAGCTATTGTTGAATCTGGTGCTGGTACTGGTTGGACAGTTTATCCACCATTAGCAAGTGCACAAGCACACTCAGGACCTTCTGTTGATTTAGCTATTTTTAGTTTACATTTAACAGGTATTTCATCTTTATTAGGTGCTATTAATTTTATTTCAACTATTTATAATATGAGAGCTCCTGGTTTAAGTTTTCATAGATTACCTTTATTTGTTTGGTCTGTATTAATTACAGCTTTTCTTTTATTATTAACATTACCAGTGTTAGCAGGTGCTATTACAATGTTATTAACCGATAGAAATTTAAATACTTCTTTTTATGACCCATCAGGTGGAGGAGATCCAGTATTATATCAATCACGCACTCGCTCGGCGGTGGTACCGGCTCGGGTATGGGCACGCTTCTTATTTCGAAGATCCGTGAAGAGTACCCGGACCGTATCATGTGCACGTACTCGGTGTGCCCGTCGCCCAAGGTGTCGGACACGGTCGTGGAGCCCTACAACGCCACGCTGTCGGTGCACCAGCTGGTTGAGAACGCCGATGAGGTCATGTGCCTGGATAACGAGGCCCTGTACGACATTTGCTTCCGCACGCTGAAGCTCACGACCCCCACCTACGGTGACCTGAACCACCTGGTGTGCGCCGCCATGTCGGGAATCACCACGTGCCTGCGTTTCCCGGGTCAGCTGAACTCGGACCTGCGTAAGCTGGCCGTGAACCTGATCCCGTTCCCGCGTCTCCACTTCTTCATGATCGGTTTCGCCCCGCTAACGTCGCGTGGCTCGCAGCAGTACCGTGCCCTGACGGTGCCCGAGCTGACGCAGCAGCAGTTCGACGCCAAGAACATGATGTGCGCCGCCGACCCGCGCCACGGCCGCTATTTAACTGCCGCGTGTATGTTCCGCGGACGTATGAGCACGAAGGAGGTGGATGAGCAGATGCTGAACGTGCAGAACAAGAACTCGTCGTACTTCGTCGAGTGGATCCCCAACAACATCAAGGCTAGCGTGTGTGACATCCCGCCCAAGGGCCTCAAGATGAGCACCACGTTCATCGGCAACTCGACCGCCATCCAGGAGATGTTTAAGCGCGTGTCCGAGCAGTTCACGGC CH97TUL2 CCACACCTAAAAACTTTCCACGTGAACCGTATCAACCCATATTGGGGGCTTGCTCCGGCGTGCGTGCTGGCCTGTAAGTCGGCGGCTGCTGCTGGGCGGGCTCTATCGCGAGCGTTTGGGCTTCGGCTCGAGCTAGTAGCTTTTTTAAACCCATTCTTAAATACTGAAATACTGTGGGGACGAAAGTCTCTGCTTTTAACTAGATAGCAACTTTCAGCAGTGGATGTCTAGGCTCGCACATCGATGAAGAACGCTGCGAACTGCGATACGTAATGCGAATTGCAGGATTCAGTGAGTCATCGAAATTTTGAACGCATATTGCACTTCCGGGTTAGTCCTGGGAGTATGCCTGTATCAGTGTCCGTACATCAACCTTGGTTTTCTTCCTTCCGTGTAGTCGGTGGAGGATATGCCAGACGTGAAGTGTCTTGCTGGCGGTCTTTCGAGCTGCCGGTGAGTCCTTTGAAATGTACTGAACTGTACTTCTCTTTGCTCGAAAAGCGTGGCGTTGCTGGTTGTGGAGGCTGCCCGTGTGGCTTGTCGGCGACCGGTTTGTTAGCTGTGACGTTTGGAGGAGTGTTCGATTCGCGGTATGGTTGGCTTCGGCTGAACAATCTGCTTATTGGGTGCTTTTCCTGTCATGGCGGTGCGAACTGGTGAACCGTAGTCATGTGGTTTGGCTTTTGAATCGGTTTTGCTTGCGAAGTAGTGTGGCGGCTTCGGCTGTCGAGGGTCGATCCATTTGGGAAACTTGTGTGTGCGGCTTGCTGCGCAATTGACGCCCCTGGCCACCGTGACTTCATCAAGAACATGATCACGGGCACCTCGCAGGCTGACTGCGCCATTCTGGTGGTCGCCTCGGGTGTGGGCGAGTTCGAGGCTGGTATCTCCAAGGAGGGCCAGACGCGCGAGCACGCTCTGCTTGCTTTCACCCTGGGTGTGAAGCAGATGATCGTKGCCATCAACAAGATGGACGACTCGTCTGTCATGTACGGCCAGGCCCGTTACGAGGAGATCAAGGCTGAGGTCACCACCTACCTGAAGAAGGTCGGCTACAAGCCCGCCAAGATCCCGTTCGTGCCCATTTCGGGCTGGGAGGGTGACAACATGATTGACCGTTCGGCCAACATGCCGTGGTACAAGGGACCCTTCCTCCTCGAGGCTCTTGACAACCTGAACGCCCCCAAGCGTCCGTCGGACAAGCCTCTGCGTCTGCCCCTCCAGGATGTGTACAAGATCGGCGGTATCGGCACGGTACCGGTCGGCCGTGTCGAGACGGGTGTCATCAAGCCCGGCATGGTCGCCACCTTCGGCCCCGTGGGTCTGTCGACGGAAGTTAAGTCCGTTGAGATGCACCACGAGTCTCTGCCGGAGGCTGTCCCCGGTGACAACGTTGGCTTCAACGTCAAGAACGTGTCGGTCAAGGAGCTGCGTCGTGGATTCGTCGCYTCGGACTCCAAGAACGACCCGGCCAAGGCCACCCAGGACTTCACCGCCCAGGTGATCGTGCTGAACCACCCCGGCCAGATCGGCAACGGCTACTCGCCGGTGCTTGACTGCCACACGGCCCACGTTGCCTGCAAGTTCAAAGAGATCATCGAGAAGATGGACCGTCGTTCGGGCAAGGTGCGAGATTATCACTTTTAATTCGTATGGAATTAGCACAACCCGGTAATCAAATTTTTATGGGAAATCATCAATTATATAATGTTGTTGTTACTGCACATGCTTTTATTATGGTTTTCTTTTTAGTTATGCCTGCTTTAATTGGTGGTTTTGGTAATTGGTTTGTTCCTTTAATGATTGGGGCACCTGATATGGCTTTTCCTCGTATGAATAATATTAGTTTTTGGTTATTACCACCCGCTTTATTATTATTAGTATCATCAGCTATTGTTGAATCTGGTGCTGGTACTGGTTGGACAGTTTATCCACCATTAGCAAGTGCACAAGCACACTCAGGACCTTCTGTTGATTTAGCTATTTTTAGTTTACATTTAACAGGTATTTCATCTTTATTAGGTGCTATTAATTTTATTTCAACTATTTATAATATGAGAGCTCCTGGTTTAAGTTTTCATAGATTACCTTTATTTGTTTGGTCTGTATTAATTACAGCTTTTCTTTTATTATTAACATTACCAGTGTTAGCAGGTGCTATTACAATGTTATTAACCGATAGAAATTTAAATACTTCTTTTTATGACCCATCAGGTGGAGGAGATCCAGTATTATATCAATCAGGCACTCGCTCGGCGGTGGTACCGGCTCGGGTATGGGCACGCTTCTTATTTCGAAGATCCGTGAAGAGTACCCGGACCGTATCATGTGCACGTACTCGGTGTGCCCGTCGCCCAAGGTGTCGGACACGGTCGTGGAGCCCTACAACGCCACGCTGTCGGTGCACCAGCTGGTTGAGAACGCCGATGAGGTCATGTGCCTGGATAACGAGGCCCTGTACGACATTTGCTTCCGCACGCTGAAGCTCACGACCCCCACCTACGGTGACCTGAACCACCTGGTGTGCGCCGCCATGTCGGGAATCACCACGTGCCTGCGTTTCCCGGGTCAGCTGAACTCGGACCTGCGTAAGCTGGCCGTGAACCTGATCCCGTTCCCGCGTCTCCACTTCTTCATGATCGGTTTCGCCCCGCTAACGTCGCGTGGCTCGCAGCAGTACCGTGCCCTGACGGTGCCCGAGCTGACGCAGCAGCAGTTCGACGCCAAGAACATGATGTGCGCCGCCGACCCGCGCCACGGCCGCTATTTAACTGCCGCGTGTATGTTCCGCGGACGTATGAGCACGAAGGAGGTGGATGAGCAGATGCTGAACGTGCAGAACAAGAACTCGTCGTACTTCGTCGAGTGGATCCCCAACAACATCAAGGCTAGCGTGTGTGACATCCCGCCCAAGGGCCTCAAGATGAGCACCACGTTCATCGGCAACTCGACCGCCATCCAGGAGATGTTTAAGCGCGTGTCCGAGCAGTTCACGGC Phytophthora_asparagi CCACACCTAAAAACTTTCCACGTGAACCGTATCAACCCAAGTTGGGGGCTTGCTCTGGCGTGCGTGTTGACCTGTAAGCTGACGGCTGCTGCTGGGCGGGCTCTATCGCGAGCGTTTGGACCTCGGTCCGAGCTAGTAGCTTTTTTAAACCCATTCTTACATACTGAAATACTGTGGGGACGAAAGTCTCTGCTTTTAACTAGATAGCAACTTTCAGCAGTGGATGTCTAGGCTCGCACATCGATGAAGAACGCTGCGAACTGCGATACGTAATGCGAATTGCAGGATTCAGTGAGTCATCGAAATTTTGAACGCATATTGCACTTCCGGGTTAGTCCTGGGAGTATGCCTGTATCAGTGTCCGTACATCAACCTTGGCTTTCTTCCTTCCGTGTAGTCGGTGGAGGAGACGCCAGACGTGAAGTGTCTTGCTGCTGGTCTTTCGAGCCGGCGGTGAGTCCTTTGAAATGTACTGAACTGTACTTCTCTTTGCTCAAAAAGCGTGGCGTTGCTGGTTGTGGAGGCTGCCTGCGTGGCCAGTCGGCGACCGGTTTGTCTGCTGTGGCGTTTGGAGGAGTGTTCGATTCGCGGTATGGTTGGCTTCGGCTGAACAATGCGCTTATTGAATGTTTTTCCTGCTGTGGCGGTACGAACTGGTGAACCGTAGCTGTGTGTGTTGGCTTTTGAACCGGCTTTGCTTGCGAAGTAGAGCGGCGGCTTCGGCTGTCGAGGGTCGATCCATTTGGGAAACTTGTGTGTGCGGCTTGCTGCGCAATTGACGCCCCCGGACACCGTGACTTCATCAAGAACATGATCACGGGCACGTCGCAGGCCGACTGCGCCATCCTCGTGGTGGCCTCGGGTGTGGGCGAGTTCGAGGCTGGTATCTCCAAGGAGGGCCAGACGCGCGAGCACGCTCTGCTGGCCTTCACGCTCGGCGTGAAGCAGATGATCGTGGCCATCAACAAGATGGACGACTCGTCGGTCATGTACGGCCAGGCCCGTTACGAGGAGATCAAGGCTGAGGTCACGACCTACCTGAAGAAGGTGGGCTACAAGCCCGCCAAGATYCCGTTCGTGCCCATCTCGGGCTGGGAGGGTGACAACATGATCGAGCGCTCGACCAACATGCCGTGGTACAAGGGACCGTTCCTCCTCGAGGCCCTCGACCTGCTGAACGCCCCCAAGCGTCCCAGCGACAAGCCTCTGCGTCTGCCCCTCCAGGACGTGTACAAGATCGGCGGTATCGGCACGGTACCGGTTGGCCGCGTCGAGACTGGCGTGATCAAGCCTGGTATGATCGCCACCTTCGGACCCGTGGGTCTGTCGACGGAAGTCAAGTCCGTTGAGATGCACCACGAGTCCCTGCCGGAGGCCCTCCCCGGTGACAACGTTGGCTTCAACGTCAAGAACGTGTCGGTCAAGGAGCTGCGTCGTGGTTTCGTCGCCTCGGACTCCAAGAACGACCCGGCCAAGGGCACGCAGGACTTCACCGCCCAGGTGATCGTGCTGAACCACCCCGGTCAGATCGGCAACGGCTACTCGCCGGTGCTTGACTGCCACACGGCCCACGTTGCCTGCAAGTTCAAAGAGATCACGGAGAAGATGGACCGTCGTTCGGGCAAGGTGCGAGGTTATCACTTTTAATCCGAATGGAATTAGCACAACCAGGTAATCAAATTTTTATGGGAAATCATCAATTATATAACGTTGTTGTTACTGCACACGCTTTTATTATGGTTTTCTTTTTAGTTATGCCTGCTTTAATTGGTGGTTTTGGTAATTGGTTTGTTCCTTTAATGATTGGAGCCCCAGATATGGCTTTTCCACGTATGAATAATATAAGTTTTTGGTTATTACCACCGGCTTTATTATTATTAGTTTCATCAGCTATTGTTGAATCGGGTGCAGGTACAGGTTGGACTGTTTATCCACCATTATCTAGTGTACAAGCGCACTCAGGACCTTCAGTAGATTTAGCTATTTTTAGTTTACATTTAACAGGTATTTCATCATTATTAGGTGCTATTAATTTTATTTCAACTATTTATAATATGCGAGCTCCAGGTTTAAGTTTTCATAGATTACCTTTATTTGTTTGGTCAGTATTAATTACTGCTTTTCTTTTATTATTAACCTTACCCGTATTAGCTGGTGCAATTACTATGTTATTAACCGATAGAAATTTAAATACTTCTTTTTATGATCCATCTGGGGGGGGAGATCCAGTATTATATCAATCACGCACTCGCTCGGTGGCGGTACCGGCTCCGGTATGGGCACGCTTCTTATCTCCAAGATCCGTGAGGAGTACCCGGACCGTATCATGTGCACGTACTCGGTGTGCCCGTCGCCCAAGGTGTCGGACACGGTCGTGGAGCCCTACAACGCTACGCTGTCGGTGCACCAGCTGGTCGAGAACGCCGATGAGGTCATGTGCCTGGATAACGAGGCCCTGTACGACATTTGCTTCCGCACGCTGAAGCTCACGACCCCCACCTACGGTGACCTGAACCACCTGGTGTGCGCCGCCATGTCCGGTATCACCACGTGCCTGCGCTTCCCGGGCCAGTTGAACTCGGACCTGCGTAAGCTGGCCGTGAACCTGATCCCGTTCCCGCGTCTTCACTTCTTCATGATCGGTTTCGCGCCGCTGACGTCGCGCGGCTCGCAGCAGTACCGTGCCCTGACGGTGCCCGAGCTGACGCAGCAGCAGTTCGACGCCAAGAACATGATGTGCGCCGCCGACCCTCGCCACGGCCGCTATTTAACTGCCGCGTGTATGTTCCGCGGACGTATGAGCACGAAGGAGGTGGATGAGCAGATGCTGAACGTGCAGAACAAGAACTCGTCGTACTTCGTCGAGTGGATCCCCAACAACATCAAGGCTAGCGTGTGTGACATCCCGCCCAAGGGACTCAAGATGAGCACCACGTTCATCGGTAACTCGACGGCCATCCAGGAGATGTTCAAGCGCGTGTCCGAACAGTTTACGGC Phytophthora_gibbosa CCACACCTAAAAACTTTCCACGTGAACCGTATCAACCCCTATTGGGGGCTTGCTCCGGCGTGCGTGCTGGCCTGTAAGTCGGCGGCTGCTGCTGGGCGGGCTCTATCGCGAGCGTTTGGGCTTCGGCTCGAGCTAGTAGCTTTTTTAAACCCATTCTTAAATACTGAAATACTGTGGGGACGAAAGTCTCTGCTTTTAACTAGATAGCAACTTTCAGCAGTGGATGTCTAGGCTCGCACATCGATGAAGAACGCTGCGAACTGCGATACGTAATGCGAATTGCAGGATTCAGTGAGTCATCGAAATTTTGAACGCATATTGCACTTCCGGGTTAGTCCTGGGAGTATGCCTGTATCAGTGTCCGTACATCAACCTTGGTTTTCTTCCTTCCGTGTAGTCGGTGGAGGATATGCCAGACGTGAAGTGTCTTGCTGGCGGTCTTTCGAGCTGCCGGTGAGTCCTTTGAAATGTACTGAACTGTACTTCTCTTTGCTCGAAAAGCGTGGCATTGCTGGTTGTGGAGGCTGCCCGTGTGGCTTGTCGGCGACCGGTTTGTTAGCTGTGACGTTTGGAGGAGTGTTCGATTCGCGGTATGGTTGGCTTCGGCTGAACAATCTGCTTATTGGGTGCTTTTCCTGTCATGGCGATACGAACTGGTGAACCGTGGTCATGTGGTTTGGCTTTTGAATCGGCTTTGCTTGCGAAGTAGTGTGGCGGCTTCGGCTGTCGAGGGTCGATCCATTTGGGAAACTTGTGTGTGCGGCTTGCTGCGCAATTGACGCCCCTGGCCACCGTGACTTCATCAAGAACATGATCACGGGCACCTCGCAGGCTGACTGCGCCATTCTGGTGGTCGCCTCGGGTGTGGGCGAGTTCGAGGCTGGTATCTCCAAGGAGGGCCAGACGCGCGAGCACGCTCTGCTTGCTTTCACCCTGGGTGTGAAGCAGATGATCGTCGCCATCAACAAGATGGACGACTCGTCTGTCATGTACGGCCAGGCCCGTTACGAGGAGATCAAGGCTGAGGTCACCACCTACCTGAAGAAGGTCGGCTACAAGCCCGCCAAGATCCCGTTCGTGCCCATCTCGGGCTGGGAGGGTGACAACATGATTGACCGTTCGGCCAACATGCCGTGGTACAAGGGACCCTTCCT?CTCGAGGCTCTTGACAACCTGAACGCCCCCAAGCGTCCGTCGGACAAGCCTCTGCGCCTGCCCCTCCAGGATGTGTACAAGATCGGCGGTATCGGCACGGTACCGGTCGGCCGTGTCGAGACGGGTGTCATCAAGCCCGGCATGGTCGCCACCTTCGGCCCCGTGGGTCTGTCGACGGAAGTCAAGTCTGTTGAGATGCACCACGAGTCTCTGCCGGAGGCTGTCCCCGGTGACAACGTTGGCTTTAACGTCAAGAACGTGTCGGTCAAGGAGCTGCGTCGTGGATTCGTCGCGTCGGACTCCAAGAACGACCCGGCCAAGGCCACCCAGGACTTCACCGCCCAGGTGATCGTGCTGAACCACCCCGGCCAGATCGGCAACGGCTACTCGCCGGTGCTTGACTGCCACACGGCCCACGT?GCCTGCAAGTTCAAAGAGATCATCGAGAAGATGGACCGTCGTTCGGGCAAGGTGCGAGATTATCACTTTTAATTCGTATGGAATTAGCACAACCAGGTAATCAAATTTTTATGGGAAATCATCAATTATATAATGTTATTGTTACTGCACACGCTTTTATTATGGTTTTCTTTTTAGTTATGCCTGCTTTAATTGGTGGTTTTGGTAATTGGTTTGTTCCTTTAATGATTGGGGCACCTGATATGGCTTTTCCTCGTATGAATAATATTAGTTTTTGGTTATTACCACCAGCTTTATTATTATTAGTATCATCAGCTATTGTTGAATCTGGTGCTGGTACAGGTTGGACAGTTTATCCACCATTAGCAAGTGCACAAGCACACTCAGGACCTTCAGTTGATTTAGCTATTTTTAGTTTACATTTAACAGGTATTTCATCTTTATTAGGTTCTATTAATTTTATTTCAACTATTTATAATATGAGAGCTCCTGGTTTAAGTTTTCATAGATTACCTTTATTTGTTTGGTCTGTATTAATTACGGCTTTTCTTTTATTATTAACATTACCCGTATTAGCAGGTGCTATTACAATGTTATTAACTGATAGAAATTTAAATACTTCTTTTTATGATCCATCTGGTGGGGGAGATCCTGTATTATATCAATCACGCACTCGCTCGGCGGTGGTACCGGCTCGGGTATGGGCACGCTTCTTATTTCGAAGATCCGTGAAGAGTACCCGGACCGTATCATGTGCACGTACTCGGTGTGCCCGTCGCCCAAGGTGTCGGACACGGTCGTGGARCCCTACAACGCCACGCTGTCGGTGCACCAGCTGGTTGAGAACGCCGATGAGGTCATGTGCCTGGATAACGAGGCCCTGTACGACATTTGCTTCCGCACGCTGAAGCTCACGACCCCCACCTACGGTGACCTGAACCACCTGGTGTGCGCCGCCATGTCGGGAATCACCACGTGCCTGCGTTTCCCGGGTCAGCTGAACTCGGACCTGCGTAAGCTGGCCGTGAACCTGATCCCGTTCCCGCGTCTCCACTTCTTCATGATCGGTTTCGCCCCGCTGACGTCGCGTGGCTCGCAGCAGTACCGTGCCCTGACGGTGCCCGAGCTGACGCAGCAGCAGTTCGACGCCAAGAACATGATGTGCGCCGCCGACCCGCGCCACGGCCGCTATTTAACTGCCGCGTGTATGTTCCGCGGACGTATGAGCACGAAGGAGGTGGATGAGCAGATGCTGAACGTGCAGAACAAGAACTCGTCGTACTTCGTCGAGTGGATCCCCAACAACATCAAGGCTAGCGTGTGTGACATCCCGCCCAAGGGCCTCAAGATGAGCACCACGTTCATCGGCAACTCGACCGCCATCCAGGAGATGTTTAAGCGCGTGTCCGAGCAGTTCACGGC Phytophthora_gonapodyides CCACACCTAAAAACTTTCCACGTGAACCGTATCAACCCCTATTGGGGGCTTGCTCCGGCGTGCGTGCTGGCCTGTAAGTCGGCGGCTGCTGCTGGGCGGGCTCTATCGCGAGCGTTTGGGCTTCGGCTCGAGCTAGTAGCTTTTTTAAACCCTTTCTTAAATACTGAAATACTGTGGGGACGAAAGTCTCTGCTTTTAACTAGATAGCAACTTTCAGCAGTGGATGTCTAGGCTCGCACATCGATGAAGAACGCTGCGAACTGCGATACGTAATGCGAATTGCAGGATTCAGTGAGTCATCGAAATTTTGAACGCATATTGCACTTCCGGGTTAGTCCTGGGAGTATGCCTGTATCAGTGTCCGTACATCAACCTTGGTTTTCTTCCTTCCGTGTAGTCGGTGGAGGATATGCCAGACGTGAAGTGTCTTGCTGGCGGTCTTTCGAGCTGCCGGTGAGTCCTTTGAAATGTACTGAACTGTACTTCTCTTTGCGCGAAAAGCGTGGCGTTGCTGGTTGTGGAGGCTGCCTGTGTGGCCAGTCGGCGACCGGTTTGTTAGCTGTGACGTTTGGAGGAGTGTTCGATTCGCGGTATGGTTGGCTTCGGCTGAACAATCTGCTTATTGGGTGCTTTTCCTGTCATGGCGGTACGAACTGGTGAACCGTAGCTGTGTGGTTTGGCTTTTGAACCGGCTTTGCTTGCGAAGTAGTGTGACGGCTTCGGCTGTCGAGGGTCGATCCATTTGGGAAACTTGTGTGTGCGGCTTGCTGCGCAATTGACGCCCCTGGTCACCGTGACTTCATCAAGAACATGATCACGGGTACCTCGCAGGCCGACTGCGCCATTCTGGTGGTTGCCTCGGGTGTGGGCGAGTTCGAGGCTGGTATCTCCAAGGAGGGCCAGACGCGCGAGCACGCTCTGCTCGCCTTCACCCTGGGTGTGAAGCAGATGATCGTCGCCATCAACAAGATGGACGACTCGTCTGTCATGTACGGCCAGGCCCGTTACGAGGAGATCAAGGCTGAGGTCACSACCTACCTGAAGAAGGTCGGCTACAAGCCYGCCAAGATCCCGTTCGTGCCCATCTCGGGCTGGGAGGGTGACAACATGATTGACCGTTCGGCCAACATGCCGTGGTACAAGGGACCCTTCCTCCTCGAGGCTCTTGACAACCTGAACGCCCCCAAGCGTCCSTCGGACAAGCCTCTGCGTCTGCCCCTCCAGGATGTGTACAAGATCGGCGGTATCGGCACGGTACCGGTCGGCCGTGTCGAGACGGGTGTCATCAAGCCCGGCATGGTCGCCACCTTCGGCCCCGTSGGTCTGTCGACGGAAGTCAAGTCCGTTGAGATGCACCACGAGTCTYTGCCGGAGGCTGTCCCCGGTGACAACGTTGGCTTCAACGTCAAGAACGTGTCGGTCAAGGAGCTGCGTCGTGGTTTCGTCGCCTCGGACTCCAAGAACGACCCGGCTAAGGCCACCCAGGACTTCACCGCCCAGGTGATCGTGCTGAACCACCCCGGCCAGATCGGCAACGGCTACTCGCCGGTGCTYGACTGCCACACGGCCCACGTTGCCTGCAAGTTCAAAGAGATCATTGAGAAGATGGACCGTCGTTCGGGCAAGGTGCGAGATTATCACTTTTAATCCGTATGGAATTAGCACAACCAGGTAATCAAATTTTTATGGGAAATCACCAATTATATAATGTTGTTGTTACTGCACATGCTTTTATTATGGTTTTCTTTTTAGTTATGCCTGCATTAATTGGTGGTTTTGGAAATTGGTTTGTTCCTTTAATGATAGGTGCTCCTGATATGGCTTTCCCACGTATGAATAATATTAGTTTTTGGTTATTACCACCAGCATTATTATTATTAGTGTCATCAGCTATTGTCGAATCTGGTGCTGGGACTGGTTGGACAGTTTATCCACCATTATCAAGTGTACAAGCACACTCAGGACCTTCAGTAGATTTAGCTATTTTTAGTTTACATTTAACGGGTATTTCATCATTATTGGGTGCAATTAATTTTATTTCAACTATTTATAATATGAGAGCTCCTGGTTTAAGTTTTCACAGATTACCCCTATTTGTTTGGTCTGTGTTAATTACAGCTTTTCTTTTATTATTAACATTACCCGTATTAGCTGGTGCCATTACTATGTTATTAACTGATAGAAATTTAAATACTTCGTTTTACGATCCATCTGGAGGAGGTGATCCGGTATTATATCAATCACGCACTCGCTCGGTGGCGGTACCGGCTCCGGCATGGGCACGCTTCTTATTTCCAAGATCCGTGAAGAGTACCCGGATCGTATCATGTGCACGTACTCGGTGTGCCCGTCGCCTAAGGTGTCGGACACGGTCGTGGAGCCCTACAACGCTACGCTGTCGGTGCACCAGCTGGTCGAGAACGCCGATGAGGTCATGTGCCTGGATAACGAGGCCCTGTACGACATTTGCTTCCGCACGCTGAAGCTCACGACCCCAACCTACGGTGACCTGAACCACCTGGTGTGCGCCGCCATGTCGGGCATCACCACGTGCCTGCGTTTCCCGGGCCAGCTGAACTCGGACCTGCGTAAGCTGGCCGTGAACCTGATCCCGTTCCCGCGTCTCCACTTCTTCATGATCGGTTTCGCCCCGCTGACGTCGCGTGGCTCGCAGCAGTACCGTGCCCTGACGGTGCCGGAGCTGACGCAGCAGCAGTTCGACGCCAAGAACATGATGTGCGCCGCCGACCCGCGCCACGGACGCTATTTAACTGCCGCGTGTATGTTCCGCGGACGGATGAGCACGAAGGAGGTGGATGAACAGATGCTGAACGTGCAGAACAAGAACTCGTCGTACTTCGTCGAGTGGATCCCCAACAACATCAAGGCAAGCGTGTGCGACATCCCGCCCAAGGGCCTCAAGATGAGCACCACGTTCATCGGTAACTCGACCGCCATCCAGGAGATGTTCAAGCGTGTGTCCGAGCAGTTCACGGC Phytophthora_gregata CCACACCTAAAAACTTTCCACGTGAACCGTATCAACCCCTATTGGGGGCTTGCTCCGGCGTGCGTGCTGGCCTGTAAGTCGGCGGCTGCTGCTGGGCGGGCTCTATCGCGAGCGTTTGGGCTTCGGCTCGAGCTAGTAGCTTTTTTAAACCCATTCTTAAATACTGAAATACTGTGGGGACGAAAGTCTCTGCTTTTAACTAGATAGCAACTTTCAGCAGTGGATGTCTAGGCTCGCACATCGATGAAGAACGCTGCGAACTGCGATACGTAATGCGAATTGCAGGATTCAGTGAGTCATCGAAATTTTGAACGCATATTGCACTTCCGGGTTAGTCCTGGGAGTATGCCTGTATCAGTGTCCGTACATCAACCTTGGTTTTCTTCCTTCCGTGTAGTCGGTGGAGGATATGCCAGACGTGAAGTGTCTTGCTGGCGGTCTTTCGAGCTGCCGGTGAGTCCTTTGAAATGTACTGAACTGTACTTCTCTTTGCTCGAAAAGCGTGGCGTTGCTGGTTGTGGAGGCTGCCCGTGTGGCTTGTCGGCGACCGGTTTGTTAGCTGTGACGTTTGGAGGAGTGTTCGATTCGCGGTATGGTTGGCTTCGGCTGAACAATCTGCTTATTGGGTGCTTTTCCTGTCATGGCGGTGCGAACTGGTGAACCGTAGTCATGTGGTTTGGCTTTTGAATCGGTTTTGCTTGCGAAGTAGTGTGGCGGCTTCGGCTGTCGAGGGTCGATCCATTTGGGAAACTTGTGTGTGCGGCTTGCTGCGCAATTGACGCCCCTGGCCACCGTGACTTCATCAAGAACATGATCACGGGCACCTCGCAGGCTGACTGCGCCATTCTGGTGGTCGCCTCGGGTGTGGGCGAGTTCGAGGCTGGTATCTCCAAGGAGGGCCAGACGCGCGAGCACGCTCTGCTTGCTTTCACCCTGGGTGTGAAGCAGATGATCGTGGCCATCAACAAGATGGACGACTCGTCTGTCATGTACGGCCAGGCCCGTTACGAGGAGATCAAGGCTGAGGTCACCACCTACCTGAAGAAGGTCGGCTACAAGCCCGCCAAGATCCCGTTCGTGCCCATTTCGGGCTGGGAGGGTGACAACATGATTGACCGTTCGGCCAACATGCCGTGGTACAAGGGACCCTTCCTCCTCGAGGCTCTTGACAGCCTGAACGCCCCCAAGCGTCCGTCGGACAAGCCTCTGCGTCTGCCCCTCCAGGATGTGTACAAGATCGGCGGTATCGGCACGGTACCGGTCGGCCGTGTCGAGACGGGTGTCATCAAGCCCGGCATGGTCGCCACTTTCGGCCCCGTGGGTCTGTCGACGGAAGTCAAGTCCGTTGAGATGCACCACGAGTCTCTGCCGGAGGCTGTCCCCGGTGACAACGTTGGCTTCAACGTCAAGAACGTGTCGGTCAAGGAGCTGCGTCGTGGATTCGTCGCCTCGGACTCCAAGAACGACCCGGCCAAGGCTACGCAGGACTTCACCGCCCAGGTGATCGTGCTGAACCACCCCGGCCAGATCGGCAACGGCTACTCGCCGGTGCTTGACTGCCACACGGCCCACGTTGCCTGCAAGTTCAAAGAGATCATCGAGAAGATGGACCGTCGTTCGGGCAAGGTGCGAGATTATCACTTTTAATTCGTATGGAATTAGCACAACCAGGTAATCAAATTTTTATGGGAAATCATCAATTATATAATGTTATTGTTACTGCACATGCTTTTATTATGGTTTTCTTTTTAGTTATGCCTGCTTTAATTGGTGGTTTTGGTAATTGGTTTGTTCCTTTAATGATTGGGGCACCTGATATGGCTTTTCCACGTATGAATAATATTAGTTTTTGGTTATTACCACCAGCTTTATTATTATTAGTATCATCAGCTATTGTTGAATCAGGTGCTGGTACTGGTTGGACAGTTTATCCACCATTAGCAAGTGCACAAGCACACTCAGGACCTTCCGTTGATTTAGCTATTTTTAGTTTACATTTAACAGGTATTTCATCTTTATTAGGTGCTATTAATTTTATTTCAACTATTTATAATATGAGAGCTCCTGGTTTAAGTTTTCATAGATTACCTTTATTTGTTTGGTCTGTATTAATTACAGCTTTTCTTTTATTATTAACATTACCTGTGTTAGCAGGTGCTATTACAATGTTATTAACCGATAGAAATTTAAATACTTCTTTTTATGACCCATCCGGTGGGGGAGATCCCGTATTATATCAATCACGCACTCGCTCGGCGGTGGTACCGGCTCGGGTATGGGCACGCTTCTTATTTCGAAGATCCGTGAAGAGTACCCGGACCGTATCATGTGCACGTACTCGGTGTGCCCGTCGCCCAAGGTGTCGGACACGGTCGTGGAGCCCTAYAACGCCACGCTGTCGGTGCACCAGCTGGTTGAGAACGCCGATGAGGTCATGTGCCTGGATAACGAGGCCCTGTACGACATTTGCTTCCGCACGCTGAAGCTCACGACCCCCACCTACGGTGACCTGAACCACCTGGTGTGCGCCGCCATGTCGGGAATCACCACGTGCCTGCGTTTCCCGGGTCAGCTGAACTCGGACCTGCGTAAGCTGGCCGTGAACCTGATCCCGTTCCCGCGTCTCCACTTCTTCATGATCGGTTTCGCCCCGCTAACGTCGCGTGGCTCGCAGCAGTACCGTGCCCTGACGGTGCCCGAGCTGACGCAGCAGCAGTTCGACGCCAAGAACATGATGTGCGCCGCCGACCCGCGCCACGGCCGCTATTTAACTGCCGCGTGTATGTTCCGCGGACGTATGAGCACGAAGGAGGTGGATGAGCAGATGCTGAACGTGCAGAACAAGAACTCGTCGTACTTCGTCGAGTGGATCCCCAACAACATCAAGGCTAGCGTGTGTGACATCCCGCCCAAGGGCCTCAAGATGAGCACCACGTTCATCGGCAACTCGACCGCCATCCAGGAGATGTTTAAGCGCGTGTCCGAGCAGTTCACGGC Phytophthora_humicola CCACACCTAAAAACTTTCCACGTGAACCGTATCAACCCCTGTTGGGAGCTTGCTCCGGCGTGCGTGCTGGCCTGTAAGTCGGCGGCTGCTGCTGCGCGGGCTCTATCGCGAGCGTTTGGGCTTCGGCTCGAGCTAGTAGCTTTTTTAAACCCCTTCTTAATTACTGAAATACTGTGGGGACGAAAGTCTCTGCTTTTAACTAGATAGCAACTTTCAGCAGTGGATGTCTAGGCTCGCACATCGATGAAGAACGCTGCGAACTGCGATACGTAATGCGAATTGCAGGATTCAGTGAGTCATCGAAATTTTGAACGCATATTGCACTTCCGGGTTCGTCCTGGAAGTATGCCTGTATCAGTGTCCGTACATCAACCTTGGTTTTCTTCCTTCCGTGTAGTCGGTGGAGGATATGCCAGACGTGAAGTGTCTTGCTAGCGGTCTTTCGAGCTGCCGGCGAGTCCTTTGAAATGTACTGAACTGTACTTCTCTTTGCTCGAAAAGCGTGGCGTTGCTGGTTGTGGAGGCTGCCCGTATGGCCAGTCGGCGACCGGTTTGTTAGCTGTAGTATATGGAGGAGTGTTCGATTCGCGGTATGGTTGGCTTCGGCTGAACAATCTGCTTATTGGGTACTTTTCCTGCTATGGCGGTACGAACTGGTGAACCGTAGCTGTGTGGATTGGCTTTTGAATCGGCTTTGCTTGCGAAGTAGAGTGGCGGCTTCGGCTGCCGAGGGTCGATCCATTTGGGAAATATGTGTGTGCGGCTTGCTGCGCAATTGACGCCCCTGGCCACCGTGACTTCATCAAGAACATGATCACGGGTACCTCGCAGGCTGACTGCGCCATTCTGGTGGTCGCTTCGGGTGTGGGCGAGTTCGAGGCTGGTATCTCCAAGGAGGGCCAGACGCGCGAGCACGCACTGCTTGCCTTCACGCTGGGTGTGAAGCAGATGATCGTCGCCATCAACAAGATGGACGACTCGTCTGTCATGTACGGCCAGGCCCGTTACGAGGAGATCAAGTCGGAGGTCACCACGTACCTGAAGAAGGTCGGCTACAAGCCCGCCAAGATCCCCTTCGTGCCCATCTCGGGCTGGGAGGGTGACAACATGATCGACCGCTCGGCGAACATGCCGTGGTACAAGGGACCCTTCCTCCTTGAGGCTCTTGACAACCTGAACGCCCCCAAGCGTCCGTCGGACAAGCCTCTTCGTCTGCCCCTCCAGGACGTGTACAAGATCGGCGGTATCGGCACGGTACCGGTCGGCCGTGTCGAGACGGGTGTGATCAAGCCCGGCATGGTCGCCACCTTCGGCCCCGTGGGTCTGTCCACGGAAGTCAAGTCCGTTGAGATGCACCACGAGTCGCTGGCGGAGGCTGTCCCCGGTGACAACGTTGGCTTCAACGTCAAGAACGTGTCGGTCAAGGAGCTGCGTCGTGGATTCGTCGCCTCGGACTCCAAGAACGACCCGGCCAAGGCCACCCAGGACTTCACCGCCCAGGTGATCGTGCTGAACCACCCCGGCCAGATCGGCAACGGCTACTCGCCGGTGCTTGACTGCCACACGGCCCACGTTGCCTGCAAGTTCAAAGAGATCATCGAGAAGATGGACCGTCGTTCGGGCAAGATTCGAGATTATCACTTTTAATTCGAATGGAATTAGCACAACCGGGTAATCAAATTTTTATGGGGAATCATCAATTATATAATGTTATTGTTACAGCACATGCTTTTATTATGGTTTTCTTTTTAGTTATGCCTGCTTTAATTGGTGGTTTTGGTAATTGGTTTGTTCCTTTAATGATAGGAGCACCTGATATGGCTTTTCCACGTATGAATAATATTAGTTTTTGGTTATTACCACCTGCTTTATTATTATTAGTATCATCAGCTATTGTTGAATCAGGTGCTGGTACTGGTTGGACTGTTTATCCACCTTTATCAAGTGTACAAGCACACTCAGGACCTTCTGTAGATTTAGCTATTTTTAGTTTACATTTAACAGGTATTTCATCATTATTAGGTGCTATTAATTTTATTTCAACAATTTATAATATGCGAGCTCCTGGTTTAAGTTTTCATAGATTACCTTTATTTGTTTGGTCTGTATTAATTACAGCTTTTCTTTTATTATTAACTTTACCTGTATTAGCTGGTGCAATTACTATGTTATTAACTGATAGAAATTTAAATACTTCTTTTTATGATCCATCTGGAGGAGGTGATCCAGTATTATATCAATCACGCACTCGCTCGGTGGCGGTACCGGCTCCGGTATGGGCACGCTTCTTATTTCGAAGATCCGTGAAGAGTACCCGGACCGTATCATGTGCACGTACTCGGTGTGCCCGTCGCCCAAGGTGTCTGACACCGTCGTGGAGCCCTACAACGCTACGCTGTCGGTGCACCAGCTGGTCGAGAACGCCGACGAGGTCATGTGCTTGGATAACGAGGCCCTGTACGACATTTGCTTCCGTACGCTGAAGCTCACTACTCCCACCTACGGCGACCTGAACCACCTGGTGTGCGCCGCCATGTCGGGCATCACCACGTGYCTGCGATTCCCCGGTCAGCTGAACTCGGATCTGCGTAAGCTAGCCGTGAACCTGATCCCGTTCCCGCGTCTTCACTTCTTCATGATCGGTTTCGCCCCGCTGACGTCCCGTGGCTCGCAGCAGTACCGTGCCCTGACGGTGCCCGAGCTGACGCAGCAGCAGTTCGACGCCAAGAACATGATGTGCGCCGCCGACCCGCGTCACGGCCGTTATTTAACTGCAGCGTGTATGTTCCGCGGACGTATGAGCACGAAGGAGGTGGATGAGCAAATGCTGAATGTGCAGAACAAGAACTCGTCATACTTCGTCGAGTGGATCCCCAACAACATCAAGGCCAGCGTGTGTGACATTCCGCCCAAGGGACTCAAGATGAGCACCACGTTCATCGGTAACTCGACCGCCATCCAGGAGATGTTCAAGCGCGTGTCCGAGCAGTTCACGGC Phytophthora_litoralis CCACACCTAAAAACTTTCCACGTGAACCGTATCAACCCTTATTGGGGGCTTGTTTCGGCGTGTGTGCTGGCCTGTAAGTCGGCGGCTGCTGCTGGGCGAGCTCTATCGCGAGCGTTTGGGCTTCGGCTCGAGCTAGTAGCTTTTTTAAACCCTTTCTTAAATACTGAAATACTGTGGGGACGAAAGTCTCTGCTTTTAACTAGATAGCAACTTTCAGCAGTGGATGTCTAGGCTCGCACATCGATGAAGAACGCTGCGAACTGCGATACGTAATGCGAATTGCAGGATTCAGTGAGTCATCGAAATTTTGAACGCATATTGCACTTCCGGGTTAGTCCTGGGAGTATGCCTGTATCAGTGTCCGTACATCAACCTTGGTTTTCTTCCTTCCGTGTAGTCGGTGGAGGATATGCCAGACGTGAAGTGTCTTGCTAGCGGTCTTTCGAGCTGCCGGTGAGTCCTTTGAAATGTACTGAACTGTACTTCTCTTTGCCCCAAAAGCGTGGCGTTGCTGGTTGTGGAGGCTGCCTGTGTGGCCAGTCGGCGACCGGTTTGTTAGCTGTGGCGTTTGGAGGAGTGTTCGATTCGCGGTATGGTTGGCTTCGGCTGAACAATCTGCTTATTGGGTGCTTTTCCTGTCATGGCGGTACGAACTGGTGAACCGTAGCTATGTGGTTTGGCTTTTGAACCGGCTTTGCTTGCGAAGTAGGGTGACAGCTTCGGCTGTCGAGGGTCGATCCATTTGGGAAACTTGTGTGTGCGGCTTGCTGCGTAATTGACGCCCCTGGTCACCGTGACTTCCTCCAGAAGATGATCCCGGGCACCTCGCATGTTCTCTGAACCATTTTGGTGGTCGCCTCGGGTGTGGGCGAGTTCGAGGCTGGTATCTCCAAGGAGGGCCAGACGCGCGAGCACGCTCTGCTTGCTTTCACCCTGGGTGTGAAGCAGATGATCGTCGCCATCAACAAGATGGACGACTCGTCTGTCATGTACGGCCAGGCCCGTTACGAGGAGATCAAGGCTGAGGTCACCACCTACCTGAAGAAGGTCGGCTACAAGCCCGCCAAGATCCCGTTCGTGCCTATCTCCGGCTGGGAGGGCGACAACATGATTGACCGCTCCTCCAACATGCCGTGGTACAAGGGACCCTTCCTGCTCGAGGCTCTTGACCTGCTGAACGCCCCCAAGCGTCCGTCGGACAAGCCTCTGCGTCTGCCCCTTCAGGACGTGTACAAGATCGGCGGTATCGGCACGGTACCGGTCGGCCGTGTCGAGACGGGTGTGATYAAGCCCGGCATGGTCGCCACTTTCGGCCCCGTGGG?CTGTCCAC?GAAGTCAAGTCCGTTGAGATGCACCACGAGTCCCTGGC?GAGGCTGTCCCCGGTGACAACGTTGGCTTCAACGTCAAGAACGTGTCGGTCAAGGAGCTGCGTCGTGGTTTCGTCGCTTCGGACTCCAAGAACGACCCGGCCAAGGCCACGCAGGACTTCACCGCCCAGGTGATCGTGCTGAACCACCCCGGCCAGATCGGCACCGGCTACT?GCCGGTGC?GGAC?ACCACACGGCCCA?GTCGC?TGCAAGTTCAAAGAGATCCTCGAGAAGATGGACCGTCGATCGGGCAATGTGAAAGATTATCCCTTTTAATCCGTATGGAATTAGCACAACCAGGTAATCAAATTTTTATGGGAAATCACCAATTATATAATGTTATTGTTACCGCACATGCTTTTATTATGGTTTTCTTTTTAGTTATGCCTGCTTTAATTGGCGGTTTTGGTAATTGGTTCGTTCCTTTAATGATAGGAGCACCTGATATGGCTTTCCCTCGTATGAATAATATAAGTTTTTGGTTATTACCTCCAGCTTTATTATTATTAGTATCATCTGCTATTGTTGAATCTGGTGCTGGTACAGGTTGGACAGTTTATCCACCATTATCTAGTGTACAAGCACACTCAGGACCTTCTGTAGATTTAGCTATTTTTAGTTTACATTTAACAGGTATTTCATCATTATTAGGTGCTATTAATTTTATTTCAACTATTTATAATATGAGAGCCCCTGGTTTAAGTTTCCATAGATTACCTTTATTTGTTTGGTCTGTATTAATTACAGCATTTCTTCTATTATTAACATTACCAGTATTAGCAGGAGCTATTACAATGTTATTAACCGATAGAAATTTAAATACTTCTTTTTATGATCCTTCTGGTGGGGGGGATCCGGTATTATATCAATCACGCACTCGCTTGGCGGTGGTACTGGCTCCGGTATGGGCACGCTTCTTATCTCCAAGATCCGTGAAGAGTACCCGGACCGTATCATGTGCACGTACTCGGTGTGCCCSTCGCCCAAGGTGTCGGACACGGTCGTGGAGCCCTACAACGCCACGCTGTCGGTGCACCAGCTGGTCGAGAACGCCGATGAGGTCATGTGCCTGGATAACGAGGCCCTGTACGACATTTGCTTCCGCACGTTGAAGCTCACGACCCCCACCTACGGTGACCTGAACCACCTGGTGTGCGCCGCCATGTCGGGTATCACCACGTGCCTGCGTTTCCCGGGTCAGCTGAACTCGGACCTGCGTAAGCTGGCCGTGAACCTGATCCCGTTCCCGCGTCTCCACTTCTTCATGATCGGTTTCGCCCCGCTGACGTCGCGCGGCTCGCAACAGTACCGTGCCCTGACGGTGCCCGAGCTGACGCAGCAGCAGTTCGACGCCAAGAACATGATGTGCGCCGCCGACCCGCGCCACGGCCGCTATTTAACTGCCGCGTGTATGTTCCGCGGACGTATGAGCACGAAGGAGGTGGATGAGCAGATGCTGAACGTGCAGAACAAGAACTCGTCGTACTTCGTCGAGTGGATCCCCAACAACATCAAGGCTAGCGTGTGTGACATCCCGCCCAAGGGCCTCAAGATGAGCACCACGTTCATTGGTAACTCGACCGCCATCCAGGAGATGTTCAAGCGCGTGTCCGAGCAGTTCACGGC Phytophthora_megasperma CCACACCTAAAAACTTTCCACGTGAACCGTATCAACCCCTATTGGGGGCTTGCTCCGGCGTGTGTGCTGGCCTGTAAGTCGGCGGCTGCTGCTGGGCGGGCTCTATCGCGAGCGTTTGGGCTTCGGCTCGAGCTAGTAGCTTTTTTAAACCCTTTCTTAAATACTGAAATACTGTGGGGACGAAAGTCTCTGCTTTTAACTAGATAGCAACTTTCAGCAGTGGATGTCTAGGCTCGCACATCGATGAAGAACGCTGCGAACTGCGATACGTAATGCGAATTGCAGGATTCAGTGAGTCATCGAAATTTTGAACGCATATTGCACTTCCGGGTTAGTCCTGGGAGTATGCCTGTATCAGTGTCCGTACATCAACCTTGGTTTTCTTCCTTCCGTGTAGTCGGTGGAGGATATGCCAGATGTGAAGTGTCTTGCTAGCGGTCTTTCGAGCTGCCGGTGAGTCCTTTTAAATGTACTGAACTGTACTTCTCTTTGCGCGAAAAGCGTGGCGTTGCTGGTTGTGGAGGCTGCCCGTGTGGCCAGTCGGCGACCGGTTTGTTAGCTGTGGCGTTTGGAGGAGTGTTCGATTCGCGGTATGGTTGGCTTCGGCTAAACAATCTGCTTATTGGGTGCTTTTCCTGTCATGGCGGTATGAACTGGTGAACCGTAGCTGTGTGGTTTGGCTTTTGAACCGGCTTTGCTTGCGAAGTAGTGTGACGGCTTCGGCTGTCGAGGGTCGATCCATTTGGGAAACTTGTGTGTGCGGCTTGCTGCGCAATTGACGCCCCTGGTCACCGTGACTTCATCAAGAACATGATCACGGGTACCTCGCAGGCTGACTGCGCCATTCTGGTCGTCGCCTCGGGTGTGGGTGAGTTTGAGGCTGGTATCTCCAAGGAGGGCCAGACGCGCGAGCACGCTCTGCTTGCCTTCACCCTGGGTGTGAAGCAGATGATCGTGGCCATCAACAAGATGGACGACTCGTCTGTCATGTACGGCCAGGCCCGTTACGAGGAGATCAAGGCTGAGGTCACGACCTACCTGAAGAAGGTCGGCTACAAGCCCGCCAAGATCCCGTTCGTGCCTATCTCGGGCTGGGAGGGTGACAACATGATCGAGCGCTCCACTAACATGCCGTGGTACAAGGGACCCTTCCTTCTTGAGGCTCTTGACCTGCTGAACGCCCCCAAGCGTCCGTCGGACAAGCCTCTGCGTCTGCCCCTCCAGGACGTGTACAAGATCGGCGGTATCGGCACGGTACCGGTCGGCCGTGTCGAGACGGGTGTGATCAAGCCTGGCATGATCGCCACCTTCGGCCCTGTGGGTCTGTCGACGGAAGTCAAGTCCGTTGAGATGCACCACGAGTCTCTGGCCGAGGCTCTTCCCGGTGACAACGTTGGCTTCAACGTCAAGAACGTGTCGGTCAAGGAGCTGCGTCGTGGATTCGTCGCTTCGGACTCCAAGAACGACCCGGCCAAGGCCACGCAGGACTTCACCGCCCAGGTGATCGTGCTGAACCACCCCGGCCAGATTGGCAACGGCTACTCGCCGGTGCTCGACTGCCACACGGCCCACGTTGCCTGCAAGTTCAAAGAGATCATCGAGAAGATGGACCGTCGTTCGGGCAAGGTGCGAGGTTATCACTTTTAATCCGTATGGAATTAGCACAACCAGGTAATCAAATTTTTATGGGAAATCACCAATTATATAATGTTGTTGTTACTGCACATGCTTTTATTATGGTTTTCTTTTTAGTTATGCCCGCTTTAATTGGTGGTTTTGGTAATTGGTTTGTTCCTTTAATGATAGGAGCACCTGATATGGCTTTCCCACGTATGAATAATATCAGTTTTTGGTTATTACCACCAGCGTTATTATTATTAGTTTCATCAGCTATTGTTGAATCCGGTGCGGGTACTGGTTGGACAGTTTATCCACCATTATCAAGTGTACAAGCACACTCAGGACCTTCAGTAGATTTAGCTATTTTTAGTTTACATTTAACAGGTATTTCATCATTATTAGGAGCTATTAATTTTATTTCAACTATTTATAATATGAGAGCTCCCGGTTTAAGTTTCCATAGATTACCTTTATTTGTTTGGTCTGTATTAATTACTGCCTTTCTTTTATTATTAACATTACCCGTATTAGCTGGTGCCATTACCATGTTATTAACTGATAGAAATTTAAATACTTCTTTTTATGACCCTTCTGGGGGGGGGGATCCAGTATTATATCAATCACGCACTCGCTCGGCGGTGGTACCGGCTCCGGTATGGGCACGCTTCTTATTTCGAAGATCCGTGAAGAGTACCCGGACCGTATCATGTGCACGTACTCGGTGTGCCCATCGCCCAAGGTGTCGGACACGGTCGTGGAGCCCTACAACGCCACGTTGTCGGTGCACCAGCTGGTCGAGAACGCCGATGAGGTCATGTGCCTGGATAACGAGGCCCTGTACGACATTTGCTTCCGCACGCTGAAGCTCACGACCCCCACCTACGGTGACCTGAACCACCTGGTGTGCGCCGCCATGTCGGGCATCACCACGTGCCTGCGTTTCCCGGGTCAGCTGAACTCGGACCTGCGTAAGCTGGCCGTGAACCTGATCCCGTTCCCTCGTCTCCACTTCTTCATGATCGGTTTCGCCCCATTGACGTCGCGCGGCTCGCAGCAGTACCGTGCCTTGACGGTGCCCGAGCTGACGCAGCAGCAGTTCGACGCCAAGAACATGATGTGCGCCGCCGACCCGCGCCACGGCCGCTATTTAACTGCCGCCTGTATGTTCCGCGGACGTATGAGCACGAAGGAGGTGGACGAGCAGATGCTGAACGTGCAGAACAAGAACTCGTCGTACTTCGTCGAGTGGATCCCCAACAACATTAAGGCTAGCGTGTGTGACATCCCGCCCAAGGGCCTCAAGATGAGCACCACGTTCATCGGTAACTCGACCGCCATCCAGGAGATGTTCAAGCGCGTGTCCGAGCAGTTCACGGC Phytophthora_pinifolia CCACACCTAAAAACTTTCCACGTGAACCGTATCAACCCCTATTGGGGGCTTGCTCCGGCGTGCGTGCTGGCCTGTAAGTCGGCGGCTGCTGCTGGGTAGGCTCTATCGCGAGCGTTTGGGCTTCGGCTCGAGCTAGTAGCTTTTTTAAACCCTTTCTTAAATACTGAAATACTGTGGGGACGAAAGTCTCTGCTTTTAACTAGATAGCAACTTTCAGCAGTGGATGTCTAGGCTCGCACATCGATGAAGAACGCTGCGAACTGCGATACGTAATGCGAATTGCAGGATTCAGTGAGTCATCGAAATTTTGAACGCATATTGCACTTCCGGGTTAGTCCTGGAAGTATGCCTGTATCAGTGTCCGTACATCAACCTTGGTTTTCTTCCTTCCGTGTAGTCGGTGGAGGATATGCCAGACGTGAAGTGTCTTGCTAGCGGTCTTTCGAGCTGCCGGTGAGTCCTTTGAAATGTACTGAACTGTACTTCTCTTTGCTCGAAAAGCGTGGCGTTGCTAGTTGTGGAGGCTGCCCGTGTGGCCAGTCGGCGACCAGTTTGTTAGCTTTGGCGTTTGGAGGAGTGTTCGATTCGCGGTATGGTTGGCTTCGGCTAAACAATCTGCTTATTGGGTGCTTTTTCAGTCATTGCGGTACGAACGGGTGAACCGTAGCTGTGTGGTTTGGCTTTTGAACCGGCTTTGCTTGCGAAGTAGGGTGGCGGCTTCGGCTGTCGAGGGTCGATCCATTTGGGAAACTTGTGTGTGCGGCTTGCTGCGCAATTGACGCTCCTGGTCACCGTGACTTYATCAAGAACATGATCACGGGYACCTCGCAGGCTGATTGCGCCATTCTGGTGGTYGCCTCGGGTGTGGGCGAGTTCGAGGCTGGTATCTCCAAGGAGGGCCAGACGCGCGAGCACGCTCTGCTTGCTTTCACYCTGGGYGTGAAGCAGATGATCGTCGCCATCAACAAGATGGACGACTCGTCYGTCATGTACGGCCAGGCCCGTTACGAGGAGATYAAGGCTGAGGTCTCKACGTACCTGAAGAAGGTCGGCTACAAGCCCGCCAAGATCCCGTTCGTGCCCATTTCGGGCTGGGAGGGTGACAACATGATTGAGCGTTCGGCCAACATGCCGTGGTACAAGGGACCTTTCCTYCTYGAGGCTCTTGACCTGCTSAACGCCCCCAAGCGTCCGTCGGACAAGCCTCTGSGYCTGCCCCTCCAGGACGTGTACAAGATYGGCGGTATCGGCACGGTACCGGTCGGCCGTGTCGAGACGGGTGTKATYAAGCCCGGCATGATYGCCACCTTCGGCCCCGTGGGTCTGTCGACTGAAGTCAAGTCCGTTGAGATGCACCACGAGTCCCTCGCGGAGGCTGTCCCCGGTGACAACGTTGGCTTCAACGTCAAGAACGYGTCGGTCAAGGAACTGCGTCGTGGWTTCGTYGCTTCGGACTCCAAGAACGACCCGGCCAAGGCSACACAGGACTTCACCGCCCAGGTGATCGTGCTGAACCACCCCGGCCAGATCGGCAACGGCTACTCGCCRGTGCCCGACTGCCACACGGCCCACGTTGCCTGCAAGTTCAAAGAGATCATCGAGAAGATGGACCGTCGTTCGGGCAAGGAGCGAGATTATCACTTCTAATCCGTATGGAATTAGCACAACCGGGAAATCAGATTTTCATGGGAAATCATCAATTATATAATGTTATTGTTACGGCACATGCTTTTATTATGGTTTTTTTCTTAGTTATGCCTGCCTTAATTGGGGGTTTTGGTAATTGGTTCGTACCTTTACTGATAGGTGCCCCAGATATGGCTTTTCCACGTATGAATAATATAAGTTTTTGGTTATTACCACCAGCTTTATTATTATTAGTGTCATCAGCTATTGTAGAATCCGGTGCTGGTACCGGTTGGACTGTTTATCCACCATTATCAAGTGTACAGGCACACTCAGGACCTTCTGTTGATTTAGCTATCTTTAGTTTACATTTAACAGGTATTTCGTCATTATTAGGTGCTATTAATTTTATTTCAACCATTTATAATATGCGAGCTCCTGGTTTAAGTTTTCATAGATTACCTTTATTTGTTTGGCCTGTATTAATTACAGCATTTCTTTTATTGTTAACATTACCAGTATTAGCTGGAGCTATTACAATGTTATTAACGGATAGGAATTTAAATACGTCTTTCTACGATCCATCAGGTGGGGGTGATCCGGTATTATATCAATCACGCACTCGCTCGGCGGTGGTACCGGCTCCGGTATGGGCACGCTTCTTATTTCGAAGATCCGTGAAGAGTACCCGGACCGTATCATGTGCACGTATTCGGTGTGCCCGTCGCCCAAGGTGTCGGACACGGTCGTGGAGCCCTACAACGCTACGCTGTCGGTGCACCAGCTGGTCGAGAACGCCGATGAGGTCATGTGCCTGGATAACGAGGCCCTGTACGACATTTGCTTCCGCACGCTGAAGCTCACGACCCCGACCTACGGTGACCTGAACCACCTGGTGTGCGCCGCCATGTCGGGCATCACCACGTGCCTGCGTTTCCCGGGTCAGCTGAACTCGGACCTGCGTAAGCTGGCCGTGAACCTGATCCCGTTCCCGCGTCTCCACTTCTTCATGATCGGTTTCGCCCCGCTGACGTCGCGTGGCTCGCAGCAGTACCGTGCCCTGACGGTGCCCGAGCTGACGCAGCAGCAGTTCGACGCCAAGAACATGATGTGCGCCGCCGACCCGCGCCACGGCCGCTATTTAACTGCCGCGTGTATGTTCCGCGGACGTATGAGCACGAAGGAGGTGGACGAGCAGATGCTGAACGTGCAAAACAAGAACTCGTCGTACTTCGTCGAGTGGATCCCCAACAACATCAAGGCTAGCGTGTGTGACATCCCRCCCAAGGGCCTCAAGATGAGCACCACGTTCATCGGTAACTCGACCGCCATCCAGGAGATGTTCAAGCGCGTGTCCGAGCAGTTCACGGC Phytophthora_rosacearum CCACACCTAAAAACTTTCCACGTGAACCGTATCAACCCCTATTGGGAGCTTGTTTCGGCGTGTGTGCTGGCCTGTTAGTCGGCGGCTGCTGCTGGGCGGGCTCTATCGCGATCGTTTGGGCTTCGGCTCGAGCGAGTAGCTTTTTTAAACCCATTCTTAATTACTGAAATACTGTGGGGACGAAAGTCTCTGCTTTTAACTAGATAGCAACTTTCAGCAGTGGATGTCTAGGCTCGCACATCGATGAAGAACGCTGCGAACTGCGATACGTAATGCGAATTGCAGGATTCAGTGAGTCATCGAAATTTTGAACGCATATTGCACTTCCGGGTTAGTCCTGGGAGTATGCCTGTATCAGTGTCCGTACATCAACCTTGGTTTTCTTCCTTCCGTGTAGTCGGTGGAGGATATGCCAGACGTGAAGTGTCTTGCTGGTGGTCTTTCGAGCTGCCGGCGAGTCCTTTGAAATGTACTGAACTGTACTTCTCTTTGCTTGAAAAGCGTGGCGTTGCTGGTTGTGGAGGCTGCCTATATGGCCAGTCGGCGACCGGTTTGTTAGCTGTAGTGTTTGGAGGAGTGTTCGATTCGCGGTATGGTTGGCTTCGGCTGAACAATCTGCTTATTGGGTGTTTTTCCTGCTATGGCGGTACAAACTGGTGAACCGTAGCTGTGTGGTTTGGCTTTTGAATCGGCTTTGCTTGCGAAGTAGAGTGGCGGCTTCGGCTGCCGAGGGTCGATCCATTTGGGAAATTTGTGTGTGCGGCTTGCTGCGCAATTGACGCCCCCGGTCACCGTGACTTCATCAAGAACATGATCACGGGTACCTCGCAGGCTGACTGCGCCATTCTGGTGGTCGCCTCGGGTGTGGGCGAGTTCGAGGCTGGTATCTCCAAGGAGGGCCAGACGCGCGAGCACGCTCTGCTCGCCTTCACCCTGGGTGTGAAGCAGATGATCGTCGCCATCAACAAGATGGACGACTCGTCTGTCATGTACGGCCAGGCCCGTTACGAGGAGATCAAGTCGGAGGTCACCACGTACCTGAAGAAGGTTGGCTACAAGCCCGCCAAGATYCCCTTCGTGCCTATCTCGGGCTGGGAGGGTGACAACATGATCGACCGCTCGGCGAACATGCCGTGGTACAAGGGACCCTTCCTCCTCGAGGCTCTTGACCTGCTGAACGCCCCCAAGCGTCCGTCGGACAAGCCTCTGCGTCTGCCCCTCCAGGATGTGTACAAGATCGGCGGTATCGGCACGGTACCGGTCGGCCGTGTCGAGACGGGTGTGATCAAGCCCGGCATGATCGCCACCTTCGGCCCCGTGGGTCTGTCCACTGAAGTCAAGTCCGTCGAGATGCACCACGAGTCGCTCGCGGAGGCTGTCCCCGGTGACAACGTTGGCTTCAACGTCAAGAACGTGTCGGTCAAGGAGCTGCGTCGTGGATTCGTCGCCTCGGACTCCAAGAACGACCCGGCCAAGGGCACGCAGGACTTCACCGCCCAGGTGATTGTGCTGAACCACCCCGGCCAGATCGGCAACGGCTACTCGCCGGTGCTTGACTGCCACACGGCCCACGTTGCCTGCAAGTTCAAAGAGATCATTGAGAAGATGGACCGTCGTTCGGGCAAGGTGCGAGATTATCACTTTTAATCCGAATGGAATTAGCACAACCAGGTAATCAAATTTTTATGGGAAATCATCAATTATATAATGTTATTGTTACAGCACATGCTTTTATTATGGTTTTTTTTTTAGTTATGCCTGCTTTAATTGGTGGTTTTGGTAACTGGTTTGTTCCTTTAATGATAGGTGCACCAGATATGGCTTTCCCACGTATGAATAATATTAGTTTTTGGTTATTACCACCAGCTTTATTATTATTAGTATCATCAGCTATTGTTGAATCAGGTGCTGGTACTGGTTGGACAGTTTATCCACCTTTATCAAGTGTACAAGCACACTCAGGACCTTCAGTAGATTTAGCTATTTTTAGTTTACATTTAACAGGTATTTCATCATTATTAGGTGCTATTAATTTTATTTCAACTATTTATAATATGCGAGCTCCTGGTTTAAGTTTTCATARATTACCTTTATTTGTTTGGTCTGTATTAATTACAGCTTTTCTTTTATTATTAACATTACCTGTGTTAGCTGGTGCCATCACAATGTTATTAACTGATAGAAATTTAAATACTTCTTTTTATGACCCATCTGGAGGAGGGGATCCTGTATTATATCAATCACGCACTCGCTCGGTGGCGGTACCGGCTCCGGTATGGGCACGCTTCTTATTTCMAAGATCCGTGAAGAGTACCCGGACCGTATCATGTGCACGTACTCGGTGTGCCCGTCGCCCAAGGTGTCGGACACAGTCGTGGAGCCCTACAACGCTACGCTGTCGGTGCACCAGCTGGTTGAGAATGCCGATGAGGTCATGTGCCTGGATAACGAGGCCCTGTACGACATTTGYTTCCGCACGCTGAAGCTCACGACCCCCACCTACGGTGACCTGAAYCACCTGGTGTGCGCCGCYATGTCGGGCATCACCACGTGCCTGCGTTTCCCGGGTCAGCTGAACTCGGACCTGCGCAAGCTGGCCGTGAACCTGATCCCATTCCCGCGTCTCCACTTCTTCATGATCGGTTTCGCCCCGCTGACGTCGCGTGGCTCGCAGCAGTACCGTGCCCTGACGGTGCCCGAGCTGACGCAGCAGCAGTTCGACGCCAAGAACATGATGTGCGCCGCCGACCCGCGCCACGGCCGCTATTTAACTGCCGCGTGTATGTTCCGCGGACGTATGAGCACGAAGGAGGTGGACGAGCAGATGCTGAACGTGCAGAACAAAAACTCGTCGTACTTCGTCGAGTGGATCCCYAACAACATCAAGGCTAGCGTGTGTGACATCCCGCCCAAGGGCCTCAAGATGAGCACCACGTTCATCGGTAACTCGACCGCCATCCAGGAGATGTTCAAGCGCGTGTCCGAGCAGTTCACGGC Phytophthora_sojae CCACACCTAAAAACTTTCCACGTGAACCGTATCAACAAGTATTGGGGGCCTGCTCTGTGGTGTCTGTCGATGTCAAAGTCGGCGGCTGCTGCTGGGCGGGCTCTATCGCGATTGTTTGGGCCTCCTCGTGGGGAACTGGATATTTTAAACCCATTCTTAAATACTGAAATACTGTGGGGACGAAAGTCTCTGCTTTTAACTAGATAGCAACTTTCAGCAGTGGATGTCTAGGCTCGCACATCGATGAAGAACGCTGCGAACTGCGATACGTAATGCGAATTGCAGGATTCAGTGAGTCATCGAAATTTTGAACGCATATTGCACTTCCGGGTTAGTCCTGGGAGTATGCCTGTATCAGTGTCCGTACATCAAACTTGGCTCTCTTCCTTCCGTGTAGTCGGTGGAGGAGACGCCAGACGTGAGGTGTCTTGCGGCGTGGCCTTCGGGCTGCCTGCGAGTCCCTTGAAATGTACTGAACTGTACTTCTCTTTGCTCGAAAAGCGTGACGTTGTTGGTTGTGGAGGCTGCCTGTATGGCCAGTCGGCGACCGGTTTGTCTGCTGCGGCGTTTGGAGGAGTGTTCGATTCGCGGTATGGTTGGCTTCGGCTGAACAATGCGCTTATTGGATGCTTTTCCTGCTGTGGCGGTATGGGCTGGTGAACCGTAGCTGTGTGAGTTGGCTTTTGAACCGGCGGTGTTTGCGAAGTAGGGTGGCGGCTTCGGCTGTCGAGGGTCGATCCATTTGGGAACTTTGTCTCTGCGGCTTGCTGCGGAATTGACGCCCCTGGCCACCGTGACTTCATCAAGAACATGATCACGGGCACCTCGCAGGCCGACTGCGCCATCCTGGTGGTCGCCTCGGGTGTGGGCGAGTTCGAGGCTGGTATCTCCAAGGAGGGCCAGACGCGCGAGCACGCTCTGCTTGCCTTCACCCTGGGTGTGAAGCAGATGATCGTCGCCATCAACAAGATGGACGACTCGTCGGTCATGTACGGCCAGGCCCGTTACGAGGAGATCAAGAACGAGGTGTCCACGTACCTGAAGAAGGTCGGCTACAAGCCCGCCAAGATCCCGTTTGTGCCCATCTCCGGCTGGGAGGGTGACAACATGATCGAGAAGTCGGGCAACATGCCGTGGTACAAGGGMCCCTACCTCCTTGAGGCTCTCGACAACCTGAACCCGCCCAAGCGCCCGCTTGACAAGCCCCTCCGTCTGCCCCTCCAGGACGTGTACAAGATCGGCGGTATYGGCACGGTACCGGTCGGCCGTGTKGAGACCGGTGTCATCAAGCCTGGCATGGTCGCCACGTTCGGCCCCGTTGGCCTGTCGACGGAAGTCAAGTCCGTTGAGATGCACCACGAGTCCCTGCCGGAGGCCGTCCCCGGTGACAACGTTGGCTTYAACGTCAAGAACGTGTCGGTGAAGGAGCTGCGTCGTGGCTACGTCGCCTCGGACTCTAAGAACGACCCGGCCAAGGGCACCCAGGACTTCACCGCCCAGGTKATCGTGCTGAACCACCCCGGCCAGATCGGCAACGGCTACTCGCCCGTGCTSGACTGCCACACGGCCCACGTTGCCTGCAAGTTCAAAGAGATCACGGAGAAGATGGACCGTCGYTCGGGCAAGGTGCGAGATTATCACTTTTAATTAGAATGGAATTAGCACAACCAGGAAATCAAATTTTAATGGGAAATCATCAATTATATAATGTAGTTGTAACTGCACACGCTTTTATCATGGTTTTCTTTTTAGTTATGCCTGCTTTAATCGGTGGTTTTGGTAATTGGTTTGTTCCTTTAATGATTGGTGCTCCAGATATGGCTTTTCCTCGTATGAATAATATTAGTTTTTGGTTATTACCTCCAGCTTTATTATTATTAGTTTCATCTGCTATTGTTGAATCTGGTGCTGGTACTGGTTGGACTGTTTATCCACCATTATCAAGTGTACAAGCGCATTCAGGACCTTCAGTAGATTTAGCAATTTTTAGTTTACATTTAACAGGTATTTCATCATTATTAGGTGCTATTAATTTTATTTCAACTATTTATAATATGAGAGCCCCTGGTTTAAGTTTTCATAGATTACCTTTATTTGTTTGGTCTGTATTAATTACAGCATTTCTTTTATTATTAACTTTACCTGTATTAGCTGGTGCAATTACTATGTTATTAACTGATAGAAATTTAAATACTTCTTTCTATGATCCATCTGGTGGGGGTGATCCAGTATTATATCAATCACGCACTCGCTGGGTGGCGGTACCGGTTCCGGTATGGGTACGCTTCTTATCTCCAAGATTCGTGAGGAGTACCCGGACCGTATCATGTGCACGTACTCGGTCTGCCCGTCGCCTAAGGTGTCGGACACGGTCGTCGAGCCCTACAACGCTACGCTGTCCGTCCACCAGCTCGTTGAGAACGCCGATGAGGTCATGTGCCTGGATAACGAGGCCCTGTACGACATTTGCTTCCGTACCCTGAAGCTCACGACCCCCACCTACGGTGACCTGAACCACCTGGTGTGCGCCGCCATGTCCGGCATTACCACGTGCCTGCGTTTCCCCGGTCAGCTGAACTCGGACCTGCGTAAGCTTGCCGTGAACCTGATCCCGTTCCCGCGTCTCCACTTCTTCATGATCGGTTTCGCCCCGCTGACGTCGCGCGGCTCGCAGCAGTACCGTGCCCTGACGGTGCCCGAGCTGACCCAGCAGCAGTTCGATGCTAAGAACATGATGTGTGCCGCCGACCCTCGCCACGGCCGCTATTTAACTGCCGCGTGTATGTTCCGCGGACGTATGAGCACGAAGGAGGTTGACGAGCAGATGCTCAACGTGCAGAACAAGAACTCGTCGTACTTCGTCGAGTGGATCCCCAACAACATCAAGGCTAGCGTGTGTGACATCCCGCCCAAGGGTCTCAAGATGAGCACCACGTTCATCGGTAACTCGACCGCTATCCAGGAGATGTTCAAGCGCGTGTCCGAACAGTTCACGGC ; END; Begin PAUP; Set Criterion = Likelihood; LSet Nst = 6 BaseFreq = Estimate RMatrix = Estimate RClass = ( a b c d e f ) Rates = Gamma Shape = Estimate NCat = 8; END; BEGIN ASSUMPTIONS; TYPESET * UNTITLED = unord: 1 - 2997; END; BEGIN TREES; Title 'clade 6 Trees from "MP_Bs_tre.tre"'; LINK Taxa = clade_6_taxa_list; TRANSLATE 1 Phytophthora_inundata, 2 CH97TUL1, 3 CH97TUL22, 4 CH97TUL2, 5 Phytophthora_asparagi, 6 Phytophthora_gibbosa, 7 Phytophthora_gonapodyides, 8 Phytophthora_gregata, 9 Phytophthora_humicola, 10 Phytophthora_litoralis, 11 Phytophthora_megasperma, 12 Phytophthora_pinifolia, 13 Phytophthora_rosacearum, 14 Phytophthora_sojae; TREE PAUP_1 = (1,((2,13)100.0,(((((3,4)99.4,8)99.4,6)100.0,7,((10,11)71.7,12)74.0)66.6,(5,14)100.0)96.9)100.0,9)0; END; BEGIN CODONS; CODESET * UNTITLED = universal: 1 - 2997; END; BEGIN MESQUITECHARMODELS; ProbModelSet * UNTITLED = 'Jukes-Cantor': 1 - 2997; END; Begin MESQUITE; MESQUITESCRIPTVERSION 2; TITLE AUTO; tell ProjectCoordinator; timeSaved 1427091464609; getEmployee #mesquite.minimal.ManageTaxa.ManageTaxa; tell It; setID 0 3225254488248726911; endTell; getEmployee #mesquite.charMatrices.ManageCharacters.ManageCharacters; tell It; setID 0 5869207352105291665; mqVersion 275; checksumv 0 3 1428371055 null getNumChars 2997 numChars 2997 getNumTaxa 14 numTaxa 14 short true bits 2305843009213693967 states 15 sumSquaresStatesOnly 952818.0 sumSquares -4.012166836031825E20 longCompressibleToShort false usingShortMatrix true NumFiles 1 NumMatrices 1; mqVersion; endTell; getWindow; tell It; suppress; setResourcesState false false 301; setPopoutState 400; setExplanationSize 0; setAnnotationSize 0; setFontIncAnnot 0; setFontIncExp 0; setSize 721 464; setLocation 8 8; setFont SanSerif; setFontSize 10; getToolPalette; tell It; endTell; desuppress; endTell; getEmployee #mesquite.minimal.ManageTaxa.ManageTaxa; tell It; showTaxa #3225254488248726911 #mesquite.lists.TaxonList.TaxonList; tell It; setTaxa #3225254488248726911; getWindow; tell It; newAssistant #mesquite.lists.DefaultTaxaOrder.DefaultTaxaOrder; newAssistant #mesquite.lists.TaxonListCurrPartition.TaxonListCurrPartition; getTable; tell It; rowNamesWidth 189; endTell; setExplanationSize 30; setAnnotationSize 20; setFontIncAnnot 0; setFontIncExp 0; setSize 420 397; setLocation 8 8; setFont SanSerif; setFontSize 10; getToolPalette; tell It; setTool mesquite.lists.TaxonList.TaxonListWindow.ibeam; endTell; endTell; showWindow; getEmployee #mesquite.lists.ColorTaxon.ColorTaxon; tell It; setColor Red; removeColor off; endTell; getEmployee #mesquite.lists.TaxonListAnnotPanel.TaxonListAnnotPanel; tell It; togglePanel off; endTell; endTell; endTell; getEmployee #mesquite.trees.BasicTreeWindowCoord.BasicTreeWindowCoord; tell It; makeTreeWindow #3225254488248726911 #mesquite.trees.BasicTreeWindowMaker.BasicTreeWindowMaker; tell It; suppressEPCResponse; setTreeSource #mesquite.trees.StoredTrees.StoredTrees; tell It; setTreeBlock 1; toggleUseWeights off; endTell; setAssignedID 893.1427091184953.8985264325052279080; getTreeWindow; tell It; setExplanationSize 30; setAnnotationSize 20; setFontIncAnnot 0; setFontIncExp 0; setSize 420 397; setLocation 8 8; setFont SanSerif; setFontSize 10; getToolPalette; tell It; setTool mesquite.trees.BasicTreeWindowMaker.BasicTreeWindow.reroot; endTell; setActive; getTreeDrawCoordinator #mesquite.trees.BasicTreeDrawCoordinator.BasicTreeDrawCoordinator; tell It; suppress; setTreeDrawer #mesquite.trees.SquareTree.SquareTree; tell It; setNodeLocs #mesquite.trees.NodeLocsStandard.NodeLocsStandard; tell It; branchLengthsToggle on; toggleScale on; toggleBroadScale off; toggleCenter on; toggleEven on; endTell; setEdgeWidth 6; orientUp; setCornerMode Right_Angle 50; endTell; setBackground White; setBranchColor Black; showNodeNumbers off; showBranchColors on; labelBranchLengths off; centerBrLenLabels on; showBrLensUnspecified on; showBrLenLabelsOnTerminals on; setBrLenLabelColor 0 0 255; setNumBrLenDecimals 6; desuppress; getEmployee #mesquite.trees.BasicDrawTaxonNames.BasicDrawTaxonNames; tell It; setColor Black; toggleColorPartition on; toggleShadePartition off; toggleShowFootnotes on; toggleNodeLabels on; toggleCenterNodeNames off; toggleShowNames on; namesAngle ?; endTell; endTell; setTreeNumber 1; setTree '(14,(5,(((1,9)0,(2,13)100.0)100.0,(7,(12,(10,11)71.7)74.0,(6,(8,(3,4)99.4)99.4)100.0)66.6)96.9)100.0);'; setDrawingSizeMode 0; toggleLegendFloat on; scale 0; toggleTextOnTree off; showWindow; endTell; desuppressEPCResponse; getEmployee #mesquite.trees.ColorBranches.ColorBranches; tell It; setColor Red; removeColor off; endTell; getEmployee #mesquite.ornamental.BranchNotes.BranchNotes; tell It; setAlwaysOn off; endTell; getEmployee #mesquite.ornamental.ColorTreeByPartition.ColorTreeByPartition; tell It; colorByPartition off; endTell; getEmployee #mesquite.ornamental.DrawTreeAssocDoubles.DrawTreeAssocDoubles; tell It; setOn on; setDigits 4; writeAsPercentage off; toggleCentred on; toggleHorizontal on; toggleWhiteEdges on; setFontSize 10; setOffset 0 0; endTell; getEmployee #mesquite.ornamental.DrawTreeAssocStrings.DrawTreeAssocStrings; tell It; setOn on; toggleCentred on; toggleHorizontal on; setFontSize 10; setOffset 0 0; endTell; getEmployee #mesquite.trees.TreeInfoValues.TreeInfoValues; tell It; panelOpen false; endTell; endTell; endTell; getEmployee #mesquite.charMatrices.BasicDataWindowCoord.BasicDataWindowCoord; tell It; showDataWindow #5869207352105291665 #mesquite.charMatrices.BasicDataWindowMaker.BasicDataWindowMaker; tell It; getWindow; tell It; setExplanationSize 30; setAnnotationSize 20; setFontIncAnnot 0; setFontIncExp 0; setSize 420 397; setLocation 8 8; setFont SanSerif; setFontSize 10; getToolPalette; tell It; endTell; setTool mesquite.charMatrices.BasicDataWindowMaker.BasicDataWindow.arrow; colorCells #mesquite.charMatrices.ColorByState.ColorByState; tell It; setStateLimit 9; toggleUniformMaximum on; endTell; colorRowNames #mesquite.charMatrices.TaxonGroupColor.TaxonGroupColor; colorColumnNames #mesquite.charMatrices.CharGroupColor.CharGroupColor; colorText #mesquite.charMatrices.NoColor.NoColor; setBackground White; toggleShowNames on; toggleShowTaxonNames on; toggleTight off; toggleThinRows off; toggleShowChanges off; toggleSeparateLines off; toggleShowStates on; toggleAutoWCharNames off; toggleAutoTaxonNames off; toggleShowDefaultCharNames off; toggleConstrainCW on; toggleBirdsEye off; toggleShowPaleGrid off; toggleShowPaleCellColors off; togglePaleInapplicable on; toggleShowBoldCellText off; toggleAllowAutosize off; toggleColorsPanel off; toggleLinkedScrolling on; toggleScrollLinkedTables off; endTell; showWindow; getWindow; tell It; forceAutosize; endTell; getEmployee #mesquite.charMatrices.ColorCells.ColorCells; tell It; setColor Red; removeColor off; endTell; getEmployee #mesquite.categ.StateNamesStrip.StateNamesStrip; tell It; showStrip off; endTell; getEmployee #mesquite.charMatrices.AnnotPanel.AnnotPanel; tell It; togglePanel off; endTell; getEmployee #mesquite.charMatrices.CharReferenceStrip.CharReferenceStrip; tell It; showStrip off; endTell; getEmployee #mesquite.charMatrices.QuickKeySelector.QuickKeySelector; tell It; autotabOff; endTell; getEmployee #mesquite.charMatrices.SelSummaryStrip.SelSummaryStrip; tell It; showStrip off; endTell; getEmployee #mesquite.align.AlignToDropped.AlignToDropped; tell It; gapCosts 8 3 2 2; subCosts 10 5 10 10 10 5 5 10 10 10 5 10; endTell; getEmployee #mesquite.molec.ColorByAA.ColorByAA; tell It; emphasizeDegeneracy off; endTell; getEmployee #mesquite.chromaseq.ColorQuality.ColorQuality; tell It; toggleAmbiguities on; toggleMarks on; endTell; getEmployee #mesquite.molec.SequenceInfoEditor.SequenceInfoEditor; tell It; panelOpen false; endTell; getEmployee #mesquite.chromaseq.SourceFileInfoEditor.SourceFileInfoEditor; tell It; panelOpen false; endTell; endTell; endTell; endTell; end;