NEXUS
[File created by TreeBASE:  7/26/07  21:16:53]
[Matrix accession#: M3110]

BEGIN TAXA;
	TITLE M3110;
	DIMENSIONS  NTAX=64;
	TAXLABELS
		Cuscuta_rhodesiana	Cuscuta_castroviejoi_2	Cuscuta_castroviejoi_1	Cuscuta_rausii	Cuscuta_planiflora_5	Cuscuta_corsicana	Cuscuta_balansae_3	Cuscuta_planiflora_3	Cuscuta_planiflora_2	Cuscuta_planiflora_6	Cuscuta_somaliensis_4	Cuscuta_abyssinica	Cuscuta_planiflora_9	Cuscuta_balansae_1	Cuscuta_pretoriana_1	Cuscuta_somaliensis_2	Cuscuta_pretoriana_2	Cuscuta_somaliensis_1	Cuscuta_palaestina_1	Cuscuta_planiflora_8	Cuscuta_planiflora_7	Cuscuta_palaestina_2	Cuscuta_balansae_2	Cuscuta_planiflora_4	Cuscuta_balansae_4	Cuscuta_macranthera_2	Cuscuta_macranthera_1	Cuscuta_nivea	Cuscuta_planiflora_1	Cuscuta_europaea_3	Cuscuta_europaea_2	Cuscuta_europaea_1	Cuscuta_epilinum	Cuscuta_triumvirati_2	Cuscuta_triumvirati_1	Cuscuta_kurdica	Cuscuta_epithymum_1	Cuscuta_epithymum_4	Cuscuta_epithymum_3	Cuscuta_epithymum_2	Cuscuta_approximata_1	Cuscuta_approximata_2	Cuscuta_approximata_3	Cuscuta_babylonica_1	Cuscuta_babylonica_2	Cuscuta_capitata_1	Cuscuta_capitata_2	Cuscuta_pulchella_3	Cuscuta_pulchella_2	Cuscuta_pulchella_1	Cuscuta_haussknechtii	Cuscuta_pedicellata_2	Cuscuta_pedicellata_1	Cuscuta_kotschyana_3	Cuscuta_kotschyana_2	Cuscuta_kotschyana_1	Cuscuta_angulata	Cuscuta_nitida_1	Cuscuta_nitida_2	Cuscuta_natalensis_2	Cuscuta_natalensis_1	Cuscuta_lupuliformis	Cuscuta_japonica	Cuscuta_monogyna
	;
END;

BEGIN CHARACTERS;
	TITLE M3110;
	DIMENSIONS NCHAR=469;
	FORMAT DATATYPE = DNA MISSING = ? GAP = -  ;
	MATRIX
		Cuscuta_rhodesiana           ACTTAATTAGATTGGGCCTTGGTATAGAAACTTACTAAGTGATGACTTTCAAATTCAGGGGAACCCCGGAATTAAGAA-AAGGGGCAATCCTGATCCAAATCCTTTTT----------CAAAAACTTA-------------------------AAGGATAGGTGCAGAGACTCAACGGAAGCTGTTCTAAGAAAGGG-ATTTGACTCTATTAAAGTCAACTAACTACTTCAATATTCATTGAATTTATT----------------GAATCATTAATTCCATAAT-AGATTCTTATATTTTGATTTTACGAACCAAACTTCT-----------------GAATGGGACAAGAATAAAGAGAGAGTCCTTT-TCTACATGTAAATACATACAAAAATGAAAGTTTTAGTAAGAAG--AAAATCCGTCGACTTTAAAAATCGTGAGGGTTCAAGTC???CAAAACAAC???A
		Cuscuta_castroviejoi_2       ACTTAATTAGATTGGGCCTTGGTATAGAAACTTACTAAGTGATGACTTTCAAATTCAGGGGAACCCCGGAATTAAGAA-AAGGGGCAATCCTGATCCAAATTCTTTTT----------CAAAAACTTA-------------------------AAGGATAGGTGCAGAGACTCAACGGAAGCTGTTCTAACAAAG----------TCTATTAAAGTCAACTAACTACTTAAATATTCATTGAATTTATT----------------GAATCATTAATTCCATAAT-AGATTCTTTTATTTTGATTTTATGAACCAAACTTCT-----------------GAATGGGACAAGAATAAAGAGAGAGTCCTTT-TCTACATGTAAATACATACAAAAATGAAAGTTTTAGTAAGAGG--AAAATCCGTCGACTTTAAAAATCGTGAGGGTTCAAGTC???CAAAACAAC???A
		Cuscuta_castroviejoi_1       ACTTAATTAGATTGGGCCTTGGTATAGAAACTTACTAAGTGATGACTTTCAAATTCAGGGGAACCCCGGAATTAAGAA-AAGGGGCAATCCTGATCCAAATTCTTTTT----------CAAAAACTTA-------------------------AAGGATAGGTGCAGAGACTCAACGGAAGCTGTTCTAACAAAGGG-ATTTGACTCTATTAAAGTCAACTAACTACTTAAATATTCATTGAATTTATT----------------GAATCATTAATTCCATAAT-AGATTCTTTTATTTTGATTTTATGAACCAAACTTCT-----------------GAATGGGACAAGAATAAAGAGAGAGTCCTTT-TCTACATGTAAATACATACAAAAATGAAAGTTTTAGTAAGAGG--AAAATCCGTCGACTTTAAAAATCGTGAGGGTTCAAGTC???CAAAACAAC???A
		Cuscuta_rausii               ACTTAATTAGATTGAGCCTTGGTATAGAAACTTACTAAGTGATGACTTTCAAATTCAGGGGAACCCTGGAATTAATAA-AAGGGGCAATCCTGATCCAAATCCTTTTT----------AAAAAACTTA-------------------------AAGGATAGGTGCAGAGACTCAACGGAAGCTGTTCTAACAAAGGA-ATTTGAC----------TAAACTAACTACTTCAATATTCATTGAATTTATT----------------GAATCATTAATTCCATAAT-AGATTCTGAAATTTTGATTTTACGAACCAAACTTCT-----------------TAATCGGACAAGAATAAAGAGAGAGTCCTTT-TCTACATGTAAATACATACAAAAATGAAAGTTTTAGTAAGAGG--AAAATCCGTCGACTTTAAAAATCGTGAGGGTTCAAGTC???CAAACCAAC???A
		Cuscuta_planiflora_5         ACTTAATTAGATTGAGCCTTGGTATAGAAACTTACTAAGTGATGACTTTCAAATTCAGGGGAACCCTGGAATTAATAA-AAGGGGCAATCCTGATCCAAATCCTTTTT----------AAAAAACTTA-------------------------AAGGATAGGTGCAGAGACTCAACGGAAGCTGTTCTAACAAAGGA-ATTTGAC----------TAAACTAACTACTTCAATATTCATTGAATTTATT----------------GAATCATTCATTCCATAAT-AGATTCTGAAATTTTGATTTTACGAACCAAACTTCT-----------------GAATCGGACAAGAATAAAGAGAGAGTCCTTT-TCTACATGTAAATACATACAAAAATAAAAGTTTTAGTAAGAGG--AAAATCCGTCGACTTTAAAAATCGTGAGGGTTCAAGTC???CAAACCAAC???A
		Cuscuta_corsicana            ACTTAATTAGATTGAGCCTTGGTATAGAAACTTACTAAGTGATGACTTTCAAATTCAGGGGAACCCTGGAATTAATAA-AAGGGGCAATCCTGATCCAAATCCTTTTG----------AAAAAACTTA-------------------------AAGGATAGGTGCAGAGACTCAACGGAAGCTATTCTAACAAAGGG-ATTTGAC----------TAAACTAACTACTTTAATATTCATTGAATTTATT----------------GAATCATTAATTCCATAAT-AGATTCTGAAATTTCGATTTTACGAACCAAACTTCT-----------------GAATGGGACAAGAATAAAGAGAGAGTCCTTT-TCTACATGTAAATACATACAAAAATGAAAGTTTTAGTAAGAGG--AAAATCCGTCGACTTTAAAAATCGTGAGGGTTCAAGTC???CAAACCAAC???A
		Cuscuta_balansae_3           ACTTAATTAGATTGgGCCTTAGTATAGAAACTTACTAAGTGATGACTTTCAAATTCAGGGGAACCCCGGAATTAAGAA-AAGGGGCAATCCTGATCCAAATCCTTTTC----------CAAAAACTTA-------------------------AAGGATAGGTGCAGAGACTCAACGGAAGCTGTTCTAACAAAGGG-ATTTGACTCTATTAAAGTAAACTAACTACTTCAATATTTATTGAATTTATT----------------GAATCATTAATTCCATAAT-AGATTCTTAGATTTCTATTTTACGAACCAAACTTCT-----------------GAATGGGACAAGAATAAAGAGAGAGTCCTTT-TCTACATGTAAATACATACAAAAATGAAAGTTTTAGTAAGAGG--AAAATCCGTCGACTTTAGAAATCGTGAGGGTTCAAGTC???CAAAACAAC???A
		Cuscuta_planiflora_3         ACTTAATTAGATTGAGCCTTGGTATAGAAACTTACTAAGTGATGACTTTCAAATTCAGGGGAACCCTGgaattaataa-aaggggcAATCCTGATCCAAATCCTTTTT----------AAAAAACTTA-------------------------AAGGATAGGTGCAGAGACTCAACGGAAGCTGTTCTAACAAAGGG-ATTTGAC----------TAAACTAACTACTTCAAAATTCATTGAATTTATT----------------GAATCATTAATTCCATAAT-------------TTCGATTTTACGAACCAAACTTCT-----------------GAATGGGACAAGAATAAAGAGAGAGTCCTTT-TCTACATGTAAATACATACAAAAATGAAAGTTTTAGTAAGAGG--AAAATCCGTCGACTTTAAAAATCGtGAGGGTTCAAGTC???CAAACCCAC???A
		Cuscuta_planiflora_2         ACTTAATTAGATTGAGCCTTGGTATAGAAACTTACTAAGTGATGACTTTCAAATTCAGGGGAACCCTGGAATTAATAA-AAGGGGCAATCCTGATCCAAATCCTTTTT----------AAAAAACTTA-------------------------AAGGATAGGTGCAGAGACTCAACGGAAGCTGTTCTAACAAAGGG-ATTTGAC----------TAAACTAACTACTTCAAAATTCATTGAATTTATT----------------GAATCATTAATTCCATAAT-------------TTCGATTTTACGAACCAAACTTCT-----------------GAATGGGACAAGAATAAAGAGAGAGTCCTTT-TCTACATGTAAATACATACAAAAATGAAAGTTTTAGTAAGAGG--AAAATCCGTCGACTTTAAAAATCGtGAGGGTTCAAGTC???CAAACCCAC???A
		Cuscuta_planiflora_6         ACTTAATTAGATTGGGCCTTGGTATAGAAACTTACTAAGTGATGACTTTCAAATTCAGGGGAACCCTGGAATTAATAA-AAGGGGCAATCCTGATCCAAATCCTTTTT----------AAAAAACTTA-------------------------AAGGATAGGTGCAGAGACTCAACGGAAGCTGTTCTAACAAAGGG-ATTTGAC----------TAAACTAACTACTTCAAAATTCATTGAATTTATT----------------GAATCATTAATTCCATAAT-------------TTCGATTTTACGAACCAAACTTCT-----------------GAATGGGACAAGAATAAAGAGAGAGTCCTTT-TCTACATGTAAATACATACAAAAATGAAAGTTTTAGTAAGAGG--AAAATCCGTCGACTTTAAAAATCGTGAGGGTTCAAGTC???CAAACCCAC???A
		Cuscuta_somaliensis_4        ACTTAATTAGATTGGGCCTTGGTATAGAAACTTACTAAGTGATGACTTTCAAATTCAGGGGAACCCCGGAATTAAGAA-AAGGGGCAATCCTGATCCAAATCCTTTTT----------CAAAAACTTA-------------------------AAGGATAGGTGCAGAGACTCAACGGAAGCTGTTCTAAGAAAGGG-ATTTGACTCTATTAAAGTCAACTAACTACTTCAATATTCATTGAATTTATT----------------GAATCATTAATTCCATAAT-AGATTCTTATATTTTGATTTTACGAACCAAACTTCT-----------------GAATGGGACAAGAATAAAGAGAGAGTCCTTT-TCTACATGTAAATACATACAAAAATGAAAGTTTTAgAAAGAAG--AAAATCCGTCGACCTTAAAAATCGtGAGggttcaagtc???CAAAACAAC???A
		Cuscuta_abyssinica           ACTTAATTAGATTGGGCCTTGGTATAGAAACTTACTAAGTGATGACTTTCAAATTCAGGGGAACCCCGGAATTAAGAA-AAGGGGCAATCCTGATCCAAATCCTTTTT----------CAAAAACTTA-------------------------AAGGATAGGTGCAGAGACTCAACGGAAGCTGTTCTAACAAAGGG-ATTTGACTCTATTAAAGTCAACTAACTACTTCAATATTCATTGAATTTATT----------------GAATCATTAATTCCATAAT-AGATTCTTATATTTTGATTTTACGAACCAAACTTCT-----------------GAATGGGACAAGAATAAAGAGAGAGTCCTTT-TCTACATGTAAATACATACAAAAATGAAAGTTTTAGTAAGAGG--AAAATCCGTCGACTTTAAAAATCGTGAGGGTTCAAGTC???CAAAACAAC???A
		Cuscuta_planiflora_9         ACTTAATTAGATTGGGCCTTGGTATAGAAACTTACTAAGTGATGACTTTCAAATTCAGGGGAACCCCGGAATTAATAA-AAGGGGCAATCCTGATCCAAATCCTGTTT----------CAAAAACTTA-------------------------AAGGATAGGCGCAGAGACTCAATGGAAGCTGTTCTAACAAAGGT-ATTTGAC----------TAAACTAACTACTTCAATATTCATTGAATTTATT----------------GAATCATTAATTCCATAAT-AGATTCTGAAATTTCGATTTTACGAAGCAAACTTCT-----------------GAATGCGACAAGAATAAAGAGAGAGTCCTTT-TCTACATGTAAATACATACAAAAATGAAAGTTTTAGTAAGAGG--AAAATCCGTCGACTTTAAAAATCGTGAGGgttcaagtc???CAAACCAAC???A
		Cuscuta_balansae_1           ACTTAATTAGATTGGGCCTTAGTATAGAAACTTACTAAGTGATGACTTTCAAATTCAGGGGAACCCCGGAATTAAGAA-AAGGGGCAATCCTGATCCAAATCCTTTTC----------CAAAAACTTA-------------------------AAGGATAGGTGCAGAGACTCAACGGAAGATGTTCTAACAAAGGG-ATTTGACTCTATTAAAGTAAACTAACTACTTCAATATTCATTGAATTTATC----------------AAATGATTAATTCCATAAT-AGATTCTGAGATTTCTATTTTACGAACCAAACTTCT-----------------GAATGGGACAAGAATAAAGAGAGAGTCCTTT-TCTACATGTAAATACATACAAAAATGAAAGTTTTAGTAAGAGG--AAAATCCGTCGACTTTAAAAATCGTGAGGGTTCAAGTC???CAAAACAAC???A
		Cuscuta_pretoriana_1         acttaattagattgggccttggtatagaaacttactaagtgatgactttcaaatTCAGGGGAACCCCGGAATTAAGAA-AAGGGGCAATCCTGATCCAAATCCTTTTT----------CAAAAACTTA-------------------------AAGGATAGGTGCAGAGACTCAACGGAAGCTGTTCTAAGAAAGGG-ATTTGACTCTATTAAAGTCAACTAACTACTTCAATATTCATTGAATTTATT----------------GAATCATTAATTCCATAAT-AGATTCTTATATTTTGATTTTACGAACCAAACTTCT-----------------GAATGGGACAAGAATAAAGAGAGAGTCCTTT-TCTACATGTAAATACATACAAAAATGAAAGTTTTAGTAAGAAG--AAAATCCGTCGACTTTAAAAATCGTGAGggttcaagtc???CAAAACAAC???A
		Cuscuta_somaliensis_2        ACTTAATTAGATTGGGCCTTGGTATAGAAACTTACTAAGTGATGACTTTCAAATTCAGGGGAACCCCGGAATTAAGAA-AAGGGGCAATCCTGATCCAAATCCTTTTT----------CAAAAACTTA-------------------------AAGGATAGGTGCAGAGACTCAACGGAAGCTGTTCTAACAAAGGG-ATTTGACTCTATTAAAGTCAACTAACTACTTCAATATTCATTGAATTTATT----------------GAATCATTAATTCCATAAT-AGATTCTTATATTTTGATTTTACGAACCAAACTTCT-----------------GAATGGGACAAGAATAAAGAGAGAGTCCTTT-TCTACATGTAAATACATACAAAAATGAAAGTTTTAGTAAGAAG--AAAATCCGTCGACTTTAAAAATCGTGAGGGTTCAAGTC???CAAAACAAC???A
		Cuscuta_pretoriana_2         ACTTAATTAGATTGGGCCTTGGTATAGAAACTTACTAAGTGATGACTTTCAAATTCAGGGGAACCCCGGAATTAAGAA-AAGGGGCAATCCTGATCCAAATCCTTTTT----------CAAAAACTTA-------------------------AAGGATAGGTGCAGAGACTCAACGGAAGCTGTTCTAAGAAAGGG-ATTTGACTCTATTAAAGTCAACTAACTACTTCAATATTCATTGAATTTATT----------------GAATCATTAATTCCATAAT-AGATTCTTATATTTTGATTTTACGAACCAAACTTCT-----------------GAATGGGACAAGAATAAAGAGAGAGTCCTTT-TCTACATGTAAATACATACAAAAATGAAAGTTTTAGTAAGAAG--AAAATCCGTCGACTTTAAAAATCGTGAGGGTTCAAGTC???CAAAACAAC???A
		Cuscuta_somaliensis_1        ACTTAATTAGATTGGGCCTTGGTATAGAAACTTACTAAGTGATGACTTTCAAATTCAGGGGAACCCCGGAATTAAGAA-AAGGGGCAATCCTGATCCAAATCCTTTTT----------CAAAAACTTA-------------------------AAGGATAGGTGCAGAGACTCAACGGAAGCTGTTCTAACAAAGGG-ATTTGACTCTATTAAAGTCAACTAACTACTTCAATATTCATTGAATTTATT----------------GAATCATTAATTCCATAAT-AGATTCTTATATTTTGATTTTACGAACCAAACTTCT-----------------GAATGGGACAAGAATAAAGAGAGAGTCCTTT-TCTACATGTAAATACATACAAAAATGAAAGTTTTAGTAAGAAG--AAAATCCGTCGACTTTAAAAATCGTGAGGGTTCAAGTC???CAAAACAAC???A
		Cuscuta_palaestina_1         ACTTAATTAGATTGGGCCTTGGTATAGAACCTTACTAAGTGATGACTTTCAAATTCAGGGGAACCCTGGAATTAATAA-AAGGGGCAATCCTGATCCAAATCCTTTTT----------AAAAAACTTA-------------------------AAGGATAGGTGCAGAGACTCAACGGAAGCTGTTCTAACAAAGGG-ATTTGAC----------TAAACTAACTACTTCAATATTCATTCAATTTATT----------------GAATCATTAATTCCATAAT-AGATTCTGAAATTTCGATTTTACGAACCAAACTTCT-----------------GAATGGGACAAGAATAAAGAGAGAGTCCTTT-TCTACATGTAAATACATACAAAAATGAAAGTTTTAGTAAGAGG--AAAATCCGTCGACTTTAAAAATCGTGAGGGTTCAAGTC???CAAACCAAC???A
		Cuscuta_planiflora_8         ACTTAATTAGATTGGGCCTTGGTATAGAAACTTACTAAGTGATGACTTTCAAATTCAGGGGAACCCTGGAATTAATAA-AAGGGGCAATCCTGATCCAAATCCTTTTG----------AAAAAACTGA-------------------------AAGGATAGGTGCAGAGACTCAACGGAAGCTATTCTAACAAAGGG-ATTTGAC----------TAAACTAACTACTTTAATATTCATTGAATTTATT----------------GAATCATTAATTCCATAAT-AGATTCTGAAATTTCGATTTTACGAACCAAACTTCT-----------------GAATGGGACAAGAATAAAGAGAGAGTCCTTT-TCTACATGTAAATACATACAAAAATGAAAGTTTTAGTAAGAGG--AAAATCCGTCGACTTTAAAAATCGTGAGggttcaagtc???CAAACCAAC???A
		Cuscuta_planiflora_7         ACTTAATTAGATTGGGCCTTGGTATAGAAACTTACTAAGTGATGACTTTCAAATTCAGGGGAACCCTGGAATTAATAA-AAGGGGCAATCCTGATCCAAATCCTTTTT----------AAAAAACTTA-------------------------AAGGATAGGTGCAGAGACTCAACGGAAGCTGTTCTAACAAAGGG-ATTTGAC----------TAAACTAACTACTTCAATATTCATTCAATTTATT----------------GAATCATTAATTCCATAAT-AGATTCTGAAATTTCGATTTTACGAACCAAACTTCT-----------------GAATGGGACAAGAATAAAGCGAGAGTCCTTT-TCTACATGTAAATACATACAAAAATGAAAGTTTTAGTAAGAGG--AAAATCCGTCGACTTTAAAAATCGTGAGGGTTCAAGTC???CAAACCAAC???A
		Cuscuta_palaestina_2         ACTTAATTAGATTGGGCCTTGGTATAGAAACTTACTAAGTGATGACTTTCAAATTCAGGGGAACCCTGGAATTAATAA-AAGGGGCAATCCTGATCCAAATCCTTTTT----------AAAAAACTTA-------------------------AAGGATAGGTGCAGAGACTCAACGGAAGCTGTTCTAACAAAGGG-ATTTGAC----------TAAACTAACTACTTCAATATTCATTCAATTTATT----------------GAATCATTAATTCCATAAT-AGATTCTGAAATTTCGATTTTACGAACCAAACTTCT-----------------GAATGGGACAAGAATAAAGAGAGAGTCCTTT-TCTACATGTAAATACATACAAAAATGAAAGTTTTAGTAAGAGG--AAAATCCGTCGACTTTAAAAATCGTGAGGGTTCAAGTC???CAAACCAAC???A
		Cuscuta_balansae_2           ACTTAATTAGATTGGGCCTTAGTATAGAAACTTACTAAGTGATGACTTTCAAATTCAGGGGAACCCCGGAATTAAGAA-AAGGGGCAATCCTGATCCAAATCCTTTTC----------CAAAAACTTA-------------------------AAGGATAGGTGCAGAGACTCAACGGAAGCTGTTCTAACAAAGGG-ATTTGaCTCTATTAAAGTAAACTAACTACTTCAATATTTATTGAATTTATT----------------GAATCATTAATTCCATAAT-AGATTCTTAGATTTCTATTTTACGAACCAAACTTCT-----------------GAATGGGACAAGAATAAAGAGAGAGTCCTTT-TCTACATGTAAATACATACAAAAATGAAAGTTTTAGTAAGAGG--AAAATCCGTCGACTTTAAAAATCGTGAGGGTTCAAGTC???CAAAACAAC???A
		Cuscuta_planiflora_4         ACTTAATTAGATTGGGCCTTGGTATAGAAACTTACTAAGTGATGACTTTCAAATTCAGGGGAACCCTGGAATTAATAA-AAGGGGCAATCCTGATCCAAATCCTTTTT----------AAAAAACTTA-------------------------AAGGATAGGTGCAGAGACTCAACGGAAGCTGTTCTAACAAAGGA-ATTTGAT----------TAAACTAACTACTTCAATATTCATTGAATTTATT----------------GAATCATTCATTCCATAAT-AGATTCTGAAATTTTGATTTTACGAACCAAACTTCT-----------------GAATCGGACAAGAATAAAGAGAGAGTCCTTT-TCTACATGTAAATACATACAAAAATAAAAGTTTTAGTAAGAGG--AAAATCCGTCGACTTTAAAAATCGTGAGGGTTCAAGTC???CAAACCAAC???A
		Cuscuta_balansae_4           ACTTAATTAGATTGGGCCTTAGTATAGAAACTTACTAAGTGATGACTTTCAAATTCAGGGGAACCCCGGAATTAAGAA-AAGGGGCAATCCTGATCCAAATCCTTTTC----------CAAAAACTTA-------------------------AAGGATAGGTGCAGAGACTCAACGGAAGCTGTTCTAATAAAGGG-ATTTGACTCTATTAAAGTAAACTAACTACTTCAATATTCATTGAATTTATT----------------GAATCATTAATTCCATAAT-AGATTATGAGATTTCTATTTTACGAACCAAACTTCT-----------------GAATGGGACAAGAATAAAGAGAGAGTCCTTT-TCTACATGTAAATACATACAAAAATGAAAGTTTTAGTAAGAGG--AAAATCCGTCGACTTTAAAAATCGTGAGGGTTCAAGTC???CAAAACAAC???A
		Cuscuta_macranthera_2        ACTTAATTAgATtGGGCCTTAGTATAGAAACTTACTAAGTGATGACTTTCAAATTCAGGGGAACCCCGGAATTAAgAa-AAGGGGCAATCCTGATCCAAATCCTTTTC----------CAAAAACTTA-------------------------AAGGATAGGTGCAGAGACTCAACGGAAGCTGTTCTAACAAAGGG-ATTTGACTCTATTAAAGTAAACTAACTACTTCAATATTCATTGAATTTATT----------------GAATCATTAATTCCATAAT-AGATTCTGAGATTTCTATTTTACGAACCAAACTTCT-----------------GAATGGGACAAGAATAAAGAGAGAGTCCTTT-TCTACATGTAAATACATACAAAAATGAAAGTTTTAGTAAGAGG--AAAATCCGTCGACTTTAAAAATCGTGAGGGTTCAAGTC???CAAAACAAC???A
		Cuscuta_macranthera_1        ACTTAATTAGATTGGGCCTTAGTATAGAAACTTACTAAGTGATGACTTTCAAATTCAGGGGAACCCCGGAATTAAGAA-AAGGGGCAATCCTGATCCAAATCCTTTTC----------CAAAAACTTA-------------------------AAGGATAGGTGCAGAGACTCAACGGAAGCTGTTCTAACAAAGGG-ATTTGACTCTATTAAAGTAAACTAACTACTTCAATATTCATTGAATTTATT----------------GAATCATTAATTCCATAAT-AGATTCTGAGATTTCTATTTTACGAACCAAACTTCT-----------------GAATGGGACAAGAATAAAGAGAGAGTCCTTT-TCTACATGTAAATACATACAAAAATGAAAGTTTTAGTAAGAGG--AAAATCCGTCGACTTTAAAAATCGTGAGGGTTCAAGTC???CAAAACAAC???A
		Cuscuta_nivea                ACTTAATTAGATTGAGCCTTAGTATAGAAACTTACTAAGTGATGACTTTCAAATTCAGGGGAACCCTGGAATTAATAA-AAGGGGCAATCCTGATCCAAATTCTTTTT----------AAAAAACTTA-------------------------AAGGATAGGTGCAGAGACTCAACGGAAGCTATTCTAACAAAGGG-ATTTGAC----------TAAACTAACTACTTCAATATTCATTGAATTTATT----------------GAATCATTAATTCCATAAT-AGATTCTGAATTTTGGATTTTACGAACCAAACTTCT-----------------GAATGGGACAAGAATAAAGAGAGAGTCCTTT-TCTACATGTAAATACATACAAAAATGAAAGTTTTAGTAAGAGGAGAAAATCCGTCGACTTGAAAAATCGTGAGGGTTCAAGTC???CAAACCAAC???A
		Cuscuta_planiflora_1         ACTTAATTAGATTGGGCCTTGGTATAGAAACTTACTAAGTGATGACTTTCAAATTCAGGGGAACCCTGGAATTAATAA-AAGGGGCAATCCTGATCCAAATCCTTTTT----------AAAAAACTTA-------------------------AAGGATAGGTGCAGAGACTCAACGGAAGCTGTTCTAACAAAGGG-ATTTGAC----------TAAACTAACTACTTCAATATTCATTCAATTTATT----------------GAATCATTAATTCCATAAT-AGATTCTGAAATTTCGATTTTACGAACCAAACTTCT-----------------GAATGGGACAAGAATAAAGACAGAGTCCTTT-TCTACATGTAAATACATACAAAAATGAAAGTTTTAGTAAGAGG--AAAATCCGTCGACTTTAAAAATCGTGAGGGTTCAAGTC???CAAACCAAC???A
		Cuscuta_europaea_3           ACTTAATTAGATTGGGCCTTAGTATAGAAACTTACTAAGTGATGACTTTCAAATTCAGGGGAACCCCGGAATTAAGAA-AAGGGGCAATCCTGATCCAAATCCTTTTG----------AAAAAACTTA-------------------------AAGGATAGGTGCAGAGACTCAACGGAAGCTGTTCTAACAAAAGG-ATTTGACTCTATTAAAGTCAACTAACTACTTCAATATTcATTGAATTTATT----------------GAATCATTAATTCCATAAT-AGATTCTGATATTTCTATTTTACGAACCAAACTTCT-----------------GAATGGGACAAGAATAAAGAGAGAGTcCTTT-TCTACATGTAAATACATACAAAAATGAAAGTTTTAGTAAGAGG--AAAATCCGTCGACTTTAAAAATCGTGAGGGTTCAAGTC???CAAAACAAC???A
		Cuscuta_europaea_2           ACTTAATTAGATTGGGCCTTAGTATAGAAACTTACTAAGTGATGACTTTCAAATTCAGGGGAACCCCGGAATTAAGAA-AAGGGGCAATCCTGATCCAAATCCTTTTG----------AAAAAACTTA-------------------------AAGGATAGGTGCAGAGACTCAACGGAAGCTGTTCTAACAAAAGG-ATTTGACTCTATTAAAGTCAACTAACTACTTCAATATTCATTGAATTTATT----------------AAATCATTAATTCCATAAT-AGATTCTGATATTTCTATTTTACGAACCAAACTTCT-----------------GAATGGGACAAGAATAAAGAGAGAGTCCTTT-TCTACATGTAAATACATACAAAAATGAAAGTTTTAGTAAGAGG--AAAATCCGTCGACTTTAAAAATCGTGAGGGTTCAAGTC???CAAAACAAC???A
		Cuscuta_europaea_1           ACTTAATTAGATTGGGCCTTAGTATAGAAACTTACTAAGTGATGACTTTCAAATTCAGGGGAACCCCGGAATTAAGAA-AAGGGGCAATCCTGATCCAAATCCTTTTG----------AAAAAACTTA-------------------------AAGGATAGGTGCAGAGACTCAACGGAAGCTGTTCTAACAAAAGG-ATTTGACTCTATTAAAGTCAACTAACTACTTCAATATTCATTGAATTTATT----------------GAATCATTAATTCCATAAT-AGATTCTGATATTTCTATTTTACGAACCAAACTTCT-----------------GAATGGGACAAGAATAAAGAGAGAGTCCTTT-TCTACATGTAAATACATACAAAAATGAAAGTTTTAGTAAGAGG--AAAATCCGTCGACTTTAAAAATCGTGAGGGTTCAAGTC???CAAAACAAC???A
		Cuscuta_epilinum             ACTTAATTAGATTGGGCCTTGGTATAGAAACTTACTAAGTGATGACTTTCAAATTCAGGGGAACCCCGGAATTAATAA-AAGGGGCAATCCTGATCCAAATCCTGTTT----------CAAAAACTTA-------------------------AAGGATAGGTGCAGAGACTCAATGGAAGCTGTTCTAACAAAGGT-ATTTGAC----------TAAACTAACTACTTCAATATTCATTGAATTTATT----------------GAATCATTAATTCCATAAT-AGATTCTGAAATTTCGATTTTACGAAGCAAACTTCT-----------------GAATGCGACAAGAATAAAGAGAGAGTCCTTT-TCTACATGTAAATACATACAAAAATGAAAGTTTTAGTAAGAGG--AAAATCCGTCGACTTTAAAAATCGTGAGGGTTCAAGTC???CAAACCAAC???A
		Cuscuta_triumvirati_2        ACTTAATTAGATTGGGCCTTGGTATAGAAACTTACTAAGTGATGACTTTCAAATTCAGGGGAACCCTGGAATTAATAA-AAGGGGCAATCCTGATCCAAATCCTTTTT----------AAAAAACTTA-------------------------AAGGATAGGTGCAGAGACTCAATGGAAGCTGTTCTAATAAAGGGGATTTGAC----------TAAACTAACTACTTCAATATTCATTGAATTTATT----------------GAATCATTAATTCCATAAT-AGATTCTGAAATTTCGATTTTACCAACCAAACTTCT-----------------AAATGGGACAAGAATAAAGAGAGAGTCCTTT-TCTACATGTAAATACATACAAAAATGAAAGTTTTAGTAAGAGG--AAAATCCGTCGACTTTAAAAATCGTGAGGGTTCAAGTC???CAAACCAAC???A
		Cuscuta_triumvirati_1        ACTTAATTAGATTGGGCCTTGGTATAGAAACTTACTAAGTGATGACTTTCAAATTCAGGGGAACCCTGGAATTAATAA-AAGGGGCAATCCTGATCCAAATCCTTTTT----------AAAAAACTTA-------------------------AAGGATAGGTGCAGAGACTCAATGGAAGCTGTTCTAATAAAGGGGATTTGAC----------TAAACTAACTACTTCAATATTCATTGAATTTATT----------------GAATCATTAATTCCATAAT-AGATTCTGAAATTTCGATTTTACGAACCAAACTTCT-----------------AAATGGGACAAGAATAAAGAGAGAGTCCTTT-TCTACATGTAAATACATACAAAAATGAAAGTTTTAGTAAGAGG--AAAATCCGTCGACTTTAAAAATCGTGAGGGTTCAAGTC???CAAACCAAC???A
		Cuscuta_kurdica              ACTTAATTAGATTGGGCCTTAGTATAGAAACTTACTAAGTGATGACTTTCAAATTCAGGGGAACCCCGGAATTAAGAA-AAGGGGCAATCCTGATCCAAATCCTTTTT----------CAAAAACTGA-------------------------AAGGATAGGTGCAGAGACTCAACGGAAGCTGTTCTAACAAAGGG-ATTTGACT---------TCAACTAACTACTTCAATA---------TTTATT----------------GAATCATTAATTCCATAAT-AGATTATGAGATTTCTATTTTACCAACCAAACTTCT-----------------GAATGGGACAAGAATAAAGAGAGAGTCCTTT-TCTACATGTAAATACATACAAAAATGAAAGTTTTAGTAAGAGG--AAAATCCGTCGACTTTAAAAATCGTGAGggttcaagtc???CAAAACAAC???A
		Cuscuta_epithymum_1          ACTTAATTAGATTGGGCCTTGGTATAGAAACTTACTAAGTGATGACTTTCAAATTCAGGGGAACCCTGGAATTAATAA-AAGGGGCAATCCTGATCCAAATCCTTTTG----------AAAAAACTTA-------------------------AAGGATAGGTGCAGAGACTCAACGGAAGCTATTCTAACAAAGGG-ATTTGAC----------TAAACTAACTACTTTAATATTCATTGAATTTATT----------------GAATCATTAATTCCATAAT-AGATTCTGAAATTTCGATTTTACGAACCAAACTTCT-----------------GAATGGGACAAGAATAAAGAGAGAGTCCTTT-TCTACATGTAAATACATACAAAAATGAAAGTTTTAGTAAGAGG--AAAATCCGTCGACTTTAAAAATCGTGAGGGTTCAAGTC???CAAACCAAC???A
		Cuscuta_epithymum_4          ACTTAATTAGATTGAGCCTTAGTATAGAAACTTACTAAGTGATGACTTTCAAATTCAGGGGAACCCTGGAATTAATAA-AAGGGGCAATCCTGATCCAAATCCTTTTT----------AAAAAACTTA-------------------------AAGGATAGGTGCAGAGACTCAACGGAAGCTTTTCTAACAAAGGG-ATTTGAC----------TAAACTAACTACTTCAATATTCATTGAATTTATTGAATCATTAATTTATTGAATCATTAATTCCATAAT-AGATTCTGAATTTTGGATTTTACGAACCAAACTTCT-----------------TAATGGGACAAGAATAAAGAGAGAGTCCTTT-TCTACATGTAAATACATACAAAAATGAAAGTTTTAGTAAGAGG--AAAATCCGTCGACTTGAAAAATCGTGAGGGTTCAAGTC???CAAACAAAC???A
		Cuscuta_epithymum_3          ACTTAATTAGATTGGGCCTTGGTATAGAAACTTACTAAGTGATGACTTTCAAATTCAGGGGAACCCTGGAATTAATAA-AAGGGGCAATCCTGATCCAAATCCTTTTG----------AAAAAACTGA-------------------------AAGGATAGGTGCAGAGACTCAACGGAAGCTATTCTAACAAAGGG-ATTTGAC----------TAAACTAACTACTTTAATATTCATTGAATTTATT----------------GAATCATTAATTCCATAAT-AGATTCTGAAATTTCGATTTTACGAACCAAACTTCT-----------------GAATGGGACAAGAATAAAGAGAGAGTCCTTT-TCTACATGTAAATACATACAAAAATGAAAGTTTTAGTAAGAGG--AAAATCCGTCGACTTTAAAAATCGTGAGGGTTCAAGTC???CAAACCAAC???A
		Cuscuta_epithymum_2          ACTTAATTAGATTGGGCCTTGGTATAGAAACTTACTAAGTGATGACTTTCAAATTCAGGGGAACCCTGGAATTAATAA-AAGGGGCAATCCTGATCCAAATCCTTTTG----------AAAAAACTGA-------------------------AAGGATAGGTGCAGAGACTCAACGGAAGCTATTCTAACAAAGGG-ATTTGAC----------TAAACTAACTACTTTAATATTCATTGAATTTATT----------------GAATCATTAATTCCATAAT-AGATTCTGAAATTTCGATTTTACGAACCAAACTTCT-----------------GAATGGGACAAGAATAAAGAGAGAGTCCTTT-TCTACATGTAAATACATACAAAAATGAAAGTTTTAGTAAGAGG--AAAATCCGTCGACTTTAAAAATCGTGAGGGTTCAAGTC???CAAACCAAC???A
		Cuscuta_approximata_1        ACTTAATTAGATTGGGCCTTAGTATAGAAACTTACTAAGTGATGACTTTCAAATTCAGGGGAACCCCGGAATTAAGAA-AAGGGGCAATCCTGATCCAAATCCTTTTC----------CAAAAACTTA-------------------------AAGGATAGGTGCAGAGACTCAACGGAAGCTGTTCTAACAAAGGG-ATTTGACTCTATTAAAGTAAACTAACTACTTCAATATTCATTGAATTTATT----------------GAATCATTAATTCCATAAT-AGATTCTGAGATTTCTATTTTACGAACCAAACTTCT-----------------GAATGGGACAAGAATAAaGAGAGAGtCCTTT-TCTACATGTAAATACATACAAAAATGAAAGTTTTAGTAAGAGG--AAAATCCGTCGACTTTAAAAATCGTGAGGGTTCAAGTC???CAAAACAAC???A
		Cuscuta_approximata_2        ACTTAATTAGATTGGGCCTTAGTATAGAAACTTACTAAGTGATGACTTTCAAATTCAGGGGAACCCCGGAATTAAGAA-AAGGGGCAATCCTGATCCAAATCCTTTTC----------CAAAAACTTA-------------------------AAGGATAGGTGCAGAGACTCAACGGAAGCTGTTCTAACAAAGGG-ATTTGACTCTATTAAAGTAAACTAACTACTTCAATATTCATTGAATTTATT----------------GAATCATTAATTCCATAAT-AGATTCTGAGATTTCTATTTTACGAACCAAACTTCT-----------------GAATGGGACAAGAATAAAGAGAGAGTCCTTT-TCTACATGTAAATACATACAAAAATGAAAGTTTTAGTAAGAGG--AAAATCCGTCGACTTTAAAAATCGTGAGGGTTCA-GTC???CAAAACAAC???A
		Cuscuta_approximata_3        ACT-AATtaGATTGGGCCTTAGTATAGAAACTTACTaAGTGATGACTTTCAAATTCAGGGGAACCCCGGAATTAAGAA-AAGGGGCAATCCTGATCCAAATCCTTTTC----------CAAAAACTTA-------------------------AAGGATAGGTGCAGAGACTCAACGGAAGCTGTTCTAACAAAGGG-ATTTGACTCTATTAAAGTAAACTAACTACTTCAATATTCATTGAATTTATT----------------GAATCATTAATTCCATAAT-AGATTCTGAGATTTCTATTTTACGAACCAAACTTCT-----------------GAATGGGACAAGAATAAAGAGAGAGTCCTTT-TCTACATGTAAATACATACAAAAATGAAAGTTTTAGTAAGAGG--AAAATCCGTCGACTTTAAAAATCGTGAGGGTTCAAGTC???CAAAACAAC???A
		Cuscuta_babylonica_1         ACTTAATTAGATTGAGCCTTGGTaTAGAAACTTACTAAGTGATGACTTTCAAATTCAGGGAAACCCCGGAATTAATAA-AAGGGGCAATCCTGAGCCAAATCCTTTTTT---------TAAAAACTGA-------------------------AAGGATAGGTGCAGAGACTCAACGGAAGCGGTTCTAAAAAATGG-AGTTGACTCTATGAAAGTAAACTAACGACTTTAATATTCATCGAATGAATTCAATGA-------ATTGAATGATTCACTCCATAAAAAAATTCTGATATATAT-TTTTA-------------------------------GAATCGGACAAGAATCAAGATAGAGTCCTTT-TCTACATGTAAATACGTACAAGAATGAAATTTTTAGTAAGAGG--AAAATCCGTCGACTTTAAAAATCGTGAGGGTTCAAGTC???CAAAAAA?????C
		Cuscuta_babylonica_2         ACTTAaTTAGATTGAGCCTTGGTATAGAAACTTACTAAGTGATGACTTTCAAATTCAGGGAAACCCCGGAATTAATAA-AAGGGGCAATCCTGAGCCAAATCCTTTTTT---------AAAAAACTGA-------------------------AAGGATAGGTGCAGAGACTCAACGGAAGCGGTTCTAAAAAATGG-AGTTGACTCTATGAAAGTAAACTAACGACTTTAATATTCATCGAATGAATTCAATGA-------ATTGAATGATTCACTCCATAAAAAAATTCTGATATATAT-TTTTA-------------------------------GAATCGGAAAAGAATCAAGATAGAGTCCTTT-TCTACATGTAAATACGTACAAGAATGAAATTTTTAGTAAGAGG--AAAATCCGTCGACTTTAAAAATCGTGAGGGTT-AAGTC???CAAAAAA?????C
		Cuscuta_capitata_1           ACTTAATAAGATTGAGCCTTGGTATAGAAACTTACTAAGTGATGACTTTCAAATTCAGGGAAATCCCGGAATTAATAATAAGGGGCAATCCTGAGCCAAATCCTTTTTTTT-------CAAAAACTTA-------------------------AAGGATAGGTGCAGAGACTCAACGGAAGCTGTTCTAAAAAATGG-AGTTGACTCTATTAAAGTCAACTAACGACTTTAATATTCATT-------------------------GAATGATTAACTCCATAAT-AGATTATGATAGATAT-TTTTACGAA-----ATTATT-ATA--------TTATAAATTGGACAAGAATAAAGATAGAGTCCTTT-TCTACATGTAAATACGTACAAGAATGAAATTTTTAGTAAGAGG--AAAATCCGTCGACTTTAAAAATCGTGAGGGTTCAAGTC???CAACA?ACA??CA
		Cuscuta_capitata_2           ACTTAaTAAGATTGAGCCTTGGTATAGAAACTTACTAAGTGATGACTTTCAAATTCAGGGAAATCCCGGAATTAATAATAAGGGGCAATCCTGAGCCAAATCCTTTTTTTTT------CAAAAACTTA-------------------------AAGGATAGGTGCAGAGACTCAACGGAAGCTGTTCTAAAAAATGG-AGTTGACTCTATTAAAGTCAACTAACGACTTTAATATTCATT-------------------------GAATGATTAACTCCATAAT-AGATTATGATAGATAT-TTTTACGAA-----ATTATT-ATA--------TTATAAATTGGACAAGAATAAAGATAGAGTCCTTT-TCTACATGTAAATACGTACAAGAATGAAATTTTTAGTAAGAGG--AAAATCCGTCGACTTTAAAAATCGTGAGGGTTCAaGTC???CAACA?ACA??CA
		Cuscuta_pulchella_3          ACTTaATTAGATCGAGCCTTGGTaTAgAAACTTACTAAGTGATGACTTTCAAATTCAGGGAAACCCCGGAATTAATAA-AAGGGGCAATCCTGAGCCAAATCCTTTTTT---------CAAAAACTTA-------------------------AAGGATAGGTGCAGAGACTCAACGGAAGCTTTTCTAAAAAATGG-AGTTGACTCT---------------------------------------------------------TAATGATTAACGCCATAAT-AGATTATGATAGATAT-TTTTACGAA-----CTTATT-ATA-------TTTATA-ATCGGACAAGAATAAAGATAGAGTCCTTT-TCTACATGTAAATACGTACAAGAATGAAATTTTTAGTAAGAGG--AAAATCCGTCGACTTTAAAAATCGTGAGGGTTCAAGTC???CAC?A?ACA?CAA
		Cuscuta_pulchella_2          AcTTaATTAGATCGAGCCTTGGTATAgAAACTTACTAAGTGATGACTTTCAAATTCAGGGAAACCCCGGAATTAATAA-AAGGGGCAATCCTGAGCCAAATCCTTTTTT---------CAAAAACTTA-------------------------AAGGATAGGTGCAGAGACTCAACGGAAGCTTTTCTAAAAAATGG-AGTTGACTCT---------------------------------------------------------TAATGATTAACGCCATAAT-AGATTATGATAGATAT-TTTTACGAA-----CTTATT-ATA-------TTTATA-ATCGGACAAGAATAAAGATAGAGTCCTTT-TCTACATGTAAATACGTACAAGAATGAAATTTTTAGTAAGAGG--AAAATCCGTCGACTTTAAAAATCGTGAGGGTTCAAGTC???CAC?A?ACA?CAA
		Cuscuta_pulchella_1          ACTTAATTAGATTGAGCCTTGGTaTAGAAACTTACTAAGTGATGACTTTCAAATTCAGGGAAACCCCGGAATTAATAA-AAGGGGCAATCCTGAGCCAAATCCTTTTTT---------CAAAAACTTA-------------------------AAGGATAGGTGCAGAGACTCAACGGAAGCTTTTCTAAAAAATGG-AGTTGACTCT---------------------------------------------------------TAATGATTAACGCCATAAT-AGATTATGATAGATAT-TTTTACGAA-----CTTATT-ATA-------TTTATA-ATCGGACAAGAATAAAGATAGAGTCCTTT-TCTACATGTAAATACGTACAAGAATGAAATTTTTAGTAAGAGG--AAAATCCGTCGACTTTAAAAATCGTGAGGGTTCAAGTC???CAC?A?ACA?CAA
		Cuscuta_haussknechtii        ACTTAATTTGATTGAGCCTTGGTATAGAAACTTACTAAGTGATGACTTTCAAATTCAGGGAAACCCCGGAATTAATAA-AAGGGGCAATCCTGAGCCAAATCCTTTTTC---------CAAAAACTTA-------------------------AAGGATAGGTGCAGAGACTCAACGGAAGCTGTTCTAAAAAATGG-AGTTGACTCT---------------------------------------------------------GAATGATTAACTCCATATATAGATTATGATAGATAT-TTTTACGAA-----CTTATT-ATATATTATA-TTATA-ATCGGACAAGAATAAAGATAGAGTCCTTT-TCTACATGTAAATACGTACAAGAATGAAATTTTTAGTAAGAGG--AAAATCCGTCGACTTTAAAAATCGTGAGggttcaagtc???CAC?A?ACAAAAA
		Cuscuta_pedicellata_2        ACTTAATTAGATTGAGCCTTGGTATAGAAACTTACTAAGTGATGACTTTCAAATTCAGGGAAACCCCGGAATTAATAA-AAGGGGCAATCCTGAGCCAAATCCTTTTTT---------AAAAAACTTA-------------------------AAGGATAGGTGCAGAGACTCAATGGAAGCTGTTCTAAAAAATAG-AGTTGACTCT---------------------------------------------------------GAATGATTAACTCCATAAT-AGATTATGATAGATAT-TTTTACCAA-----CTTATT-ATA-------TTTATA-ATCGGACAAGAATAAAGATAGAGTCCTTT-TCTACATGTAAATACGTACAAGAATGAAATTTTTAGTAAGAGG--AAAATCCGTCGACTTTAAAAATCGTGAGGGTTCAAGTC???CAC?A?ACA?CAA
		Cuscuta_pedicellata_1        ACTTAATTAGATTGAGCCTTGGTATAGAAACTTACTAAGTGATGACTTTCAAATTCAGGGAAACCCCGGAATTAATAA-AAGGGGCAATCCTGAGCCAAATCCTTTTTT---------AAAAAACTTA-------------------------AAGGATAGGTGCAGAGACTCAATGGAAGCTGTTCTAAAAAATAG-AGTTGACTCT---------------------------------------------------------GAATGATTAACTCCATAAT-AGATTATGATAGATAT-TTTTACCAA-----CTTATT-ATA-------TTTATA-ATCGGACAAGAATAAAGATAGAGTCCTTT-TCTACATGTAAATACGTACAAGAATGAAATTTTTAGTAAGAGG--AAAATCCGTCGACTTTAAAAATCGTGAGGGTTCAAGTC???CAC?A?ACA?CAA
		Cuscuta_kotschyana_3         ACTTAaTTAGATTGAGCCTTGGTATAGaAACTTACTAAGTGATTACTTTCAAATTCAGGGAaACCCCGGAATTAATAA-AAGGGGCAATCCTGAGCCAAATCCTTTTTT---------CAAAAACTTA-------------------------AAGGATAGGTGCAGAGACTCAACGGAAGCTGTTCTAAAAAATGG-AATTGACTCT---------------------------------------------------------GAATGATTAACTCCATAAT-TGATTATGATAGATAT-TTTTACGAA-----CTTATT-ATATTTATAATTTATA-ATCGGACAAGAATAAAGATAGAGTCCTTT-TCTACATGTAAATACGTACAATAATGAAATTTTTAGTAAGAGG--AAAATCCGTCGACTTTAAAAATCGTGAGGGTTCAAGTC???CAC?A?ACAAAAA
		Cuscuta_kotschyana_2         ACTTAATTAGATtGAGCCTTGGTATAGAAACTTACTAAGTGATGACTTTCAAATTCAGGGAAACCCCGGAATTAATAA-AAGGGGCAATCCTGAGCCAAATCCTTTTTT---------CAAAAACTTA-------------------------AAGGATAGGTGCAGAGACTCAACGGAAGCTGTTCTAAAAAATGG-AGTTGACTCT---------------------------------------------------------GAATGATTAACGCCATAAT-AGATTATGATAGATAT-TTTTACGAA-----CTTCTT-ATA-------TTTATA-ATCGGACAAGAATAAAGATAGAGTCCTTT-TCTACATGTAAATACGTACAAGAATGAAATTTTTAGTAAGAGG--AAAATCCGTCGACTTTAAAAATCGTGAGGGTTCAAGTC???CAC?A?ACA?CAA
		Cuscuta_kotschyana_1         ACTTAATTAGATTGAGCCTTGGTATAGAAACTTACTAAGTGATGACTTTCAAATTCAGGGAAACCCCGGAATTAATAA-AAGGGGCAATCCTGAGCCAAATCCTTTTTT---------CAAAAACTTA-------------------------AAGGATAGGTGCAGAGACTCAACGGAAGCTGTTCTAAAAAATGG-AGTTGACTCT---------------------------------------------------------GAATGATTAACGCCATAAT-AGATTATGATAGATAT-TTTTACGAA-----CTTCTT-ATA-------TTTATA-ATCGGACAAGAATAAAGATAGAGTCCTTT-TCTACATGTAAATACGTACAAGAATGAAATTTTTAGTAAGAGG--AAAATCCGTCGACTTTAAAAATCGTGAGGGTTcAAGtC???CAC?A?ACA?CAA
		Cuscuta_angulata             ACTTAATTGGATTGAGCCTTGGTATGGAAACTTACTAAGTGATCACTTTCAAATTCAGAGAAACCCTGGAAGAAATAA-AAGGGGCAATCCTGATCCAAATCCGGTTTTT--------GAAAAACTGAAGAAATGAAGAAA-----------AAAGGATAGGTGCAGAGACTCAACGGAAGCTTTTCTCAAAAATGC-AGGAGTATTATATAAAGT------------------------------------------------------------CTTATAGT-CTAGTCGGAGAAATAT-GTTGCCGAA-----CTTATTCATA----TAACATCTCAATCGCACGAGAATAAAGATAGAGTCCTTT-TCTACATGTAAATACGTACAACAATGAAAGTTTTAGTAATAGG--AAAATCCGTCGATTTTAAAAATCGTGAGggttcaagtc?AAAAA?A?ACACAAA
		Cuscuta_nitida_1             ACTTAATTAgATtGAGCCTTGGTATAGAAACTTACTAAGTGATGACTTTCAAATTCAGAGAAACCCTGGAAGAAATAA-AAGGGGCAATCCTGAGCCAAATCCGGTTTTT--------GAAAAACTGAATAAA-------------------AAAGGATAGGTGCAGAGACTCAACGGAAGCTTTTCTAACAAATGC-AAGAGTCTTATATAGAGT---------------------------------------------------------------------CTAGTCAGAGAAATCT-TTTGCCGAA-----CTTCTTCATA----TAACATATAAATCGCACGAGAATAAAGATAGAGTCCTTTATCTACATGTAAATACATACAACAATGAAAGTTTTAGTAAGAGG--AAAATCCGTCGATTTTTAAAATCGTGAGGGTTCAAGTC??CACA?A?ACACAAA
		Cuscuta_nitida_2             ACTTAATTGGATTGAGCCTTGGTATGG-AACTTACTAAGTGATCACTTTCAAATTCAGAGAAACCCTGGAAGAAATAA-AAGGGGCAATCCTGAGCCAAATCCGGTTTTT--------GAAAAACTGAATAAA-------------------AAAGGATAGGTGCAGAGACTCAACGGAAGCTTTTCTAACAAATGC-AAGAGTCTTATATAGAGT---------------------------------------------------------------------CTAGTCAGAGAAATCT-TTTGCCGAA-----CTTCTTCATA----TAACATATAAATCGCACGAGAATAAAGATAGAGTCCTTTATCTACATGTAAATACATACAACAATGAAAGTTTTAGTAAGAGG--AAAATCCGTCGATTTTTAAAATCGTGAGGGTTCAAGTC??CACA?A?ACACAAA
		Cuscuta_natalensis_2         ACTTAaTTGGATCGAGCCTTGGTaTGG-AACTTATTAAGTGATCACTTTCAAATTCAGAGAAACCCTGGAAGAAATAA-AAGGGGCAATCCTGAGCCAAATCCGGTTTTT--------GAAAAACTGAAGAAAG------------------AAAGGATAGGTGCAGAGACTCAACGGAAGCTTTTCTAACAAATGC-AAGAGTATTATATATAGT---------------------------------------------------------------------CTAGTCGGAGAAATCT-TTTGCGGAA-----CTTCTTCATA----TAACATATAAATCGCACGAGAATAAAGATAGAGTCCTTTATCTATATGTAACTACGTACAACAATGAAAGTTTTAGTAAGAGG--AAAATCCGTCGATTTTAAAAATCGTGAGGGTTCAAGTC?CAACA?A?ACACAAA
		Cuscuta_natalensis_1         ACTTAaTTGGATCGAGCCTTGGTATGGaAACTTATTAAGTGATCACTTTCAAATTCAGAGAAACCCTGGAAGAAATAA-AAGGGGCAATCCTGAGCCAAATCCGGTTTTT--------GAAAAACTGAAGAAAG------------------AAAGGATAGGTGCAGAGACTCAACGGAAGCTTTTCTAACAAATGC-AAGAGTATTATATATAGT---------------------------------------------------------------------CTAGTCGGAGAAATCT-TTTGCGGAA-----CTTCTTCATA----TAACATATAAATCGCACGAGAATAAAGATAGAGTCCTTTATCTATATGTAACTACGTACAACAATGAAAGTTTTAGTAAGAGG--AAAATCCGTCGATTTTTAAAATCGTGAGGGTTCAAGTC?CAACA?A?ACACAAA
		Cuscuta_lupuliformis         ACTTAATTGGATTGAGCCTTGATATGGAAACGTAATAAGTGAGAACTTTCAAATTCAGAGAAACCCTGGAATTAATAAGAAGGGGCGATCCTGAGCCAAATCCTGTTTTACAAATTTAGAAAACCAAACAAAAGT------------TTAAAAAAGGATAGGTGCAGAGACTCAACGGAAGATGTTCTAACAAATGG-AGTTTACT-----ATATTGAAGTAAAGG----AATATTCATTTAAT-----------------AAAAAAAAAATTCACTGCATAGT-CTAGTCTTAAAGCTAG-TTTTACGAA-----CTTAT-----------------AAAAAAGACGAGAATAAAGATAGAGTCCTTTATCTATATGTCAAGACGGGCAAGAATGAAATTTTTAGTAAGAGG--AAAATCCGTCGACTTTAAAAATCGTGAGGGTTCAAGCCCAAAAAAAAACC???A
		Cuscuta_japonica             ACTTAATTGGATTGAGCCTTGATATGGAAACGTACTAAGTGATAACTTTCAAATTCAGAGAAACCCTGGAATTAAAAAGAAGGGGCGATCCTGAGCCAAATCCTGTTTTACAAATTTCCAAAAACAAACAAAAGT------------TTAAAAAAGGATAGGTGCAGAGACTCAACGGAAGATGTTCTAACAAATGG-AGTTTATTCTGTGATATTGAAGTAAAGG----AATATTCATTGAATTTGTT----------------AAAAAATTCACTGCATAGT-CTAGTCTTAAAGCTAT-TTTTACGAA-----CTTAT-----------------AAAAAATACGAGAATAAAGATAGAGTCCTTTATCTATATGTCAAGACGGGCAAGAATGAAATTTTTAGTAAGAGG--AAAATCCGTCGACTTTAAAAATCGTGAGGgttcaagtcCAAAAAAAAACC???A
		Cuscuta_monogyna             ACTtAATTGGATTGAGCCTTGATATGGAAACATACTaAGTGATAACTTTCAAATTCAGAGAAACCCTGGAATTAAAAATAAGGGGCGATCCTGAGCCAAATCCTGTTTTACAAATTTACAAAAACAAACAAAAGTGAAAAAAAAGTGAAAAAAAAGGATAGGTGCAGAGACTCAACGGAAGATGTTCTAACAAATGG-AGTTTACT--------------------------------TTGAATTTGTT----------------AAAAAATTCACTGCATAGT-CTAGTCTTAAAGATAT-TTTTACGAA-----CTTAT-----------------CAAAAAGACGAGAATAAAGATAGAGTCCTTT-TCTATATGTCAAGACGGACAAGAATGCAATTTTTAGTAAGAGG--AAAATCCGTCGACTTTAAAAATCGTGAGGGTTCAAGTCAAAAAAAAAACC???A
	;
END;

BEGIN ASSUMPTIONS;
CHARSET trnL = 1 - 453 ; 
 CHARSET gaps = 454 - 469 ; 
 END;