NEXUS [File created by TreeBASE: 7/26/07 21:17:04] [Matrix accession#: M2909] BEGIN TAXA; TITLE M2909; DIMENSIONS NTAX=29; TAXLABELS Cymbilaimus_lineatus Frederickena_unduligera Sakesphorus_bernardi Sakesphorus_canadensis Sakesphorus_luctuosus Thamnomanes_caesius Thamnophilus_aethiops Thamnophilus_amazonicus Thamnophilus_aroyae Thamnophilus_atrinucha Thamnophilus_bridgesi Thamnophilus_caerulescens Thamnophilus_cryptoleucus Thamnoophilus_doliatus Thamnophilus_insignis Thamnophilus_murinus Thamnophilus_nigriceps Thamnophilus_nigrocinereus Thamnophilus_palliatus Thamnophilus_praecox Thamnophilus_punctatus Thamnophilus_stictocephalus Thamnophilus_ruficapillus Thamnophilus_schistaceus Thamnophilus_tenuepunctatus Thamnophilus_torquatus Thamnophilus_unicolor Thamnophilus_zarumae Thamnophilus_divisorius ; END; BEGIN CHARACTERS; TITLE M2909; DIMENSIONS NCHAR=532; FORMAT DATATYPE = DNA MISSING = ? GAP = - ; MATRIX Cymbilaimus_lineatus AGGTTAGTGTGAAATAACTGTGTTGTTAAAATATTAATG-GATGGATGCTACCAAAAATAATTAGTGATTTGCATTTTATACAAACAAGTATGGAGTGATACCTTTTGTAGTTACTTGAGAATTAAATCTAACTCATTCAGGAAAGTCTCGTTGGTCATCTGCTGATACATGGTTGCATACTTCTATAATGAAACTGGAAATAAACTGCATAGGTATCTTCTGTGACCAGAATGGATAATGTATATGTGGGCAGAGAAGAAGAGCCTGGCTCATTTCTTATT-ATGCACTAGGCAAAAGAACAGGGCATTCCTTCAATTTCTGCTT-TTTTTCACCTTTCCTTATGAAGCAAGGTACTAC-TTAAGTATGAGCAAAAATCGCAAAGCTGAGGTCATAAGCAGTGAAGGACCTGCTGCAAGGAAGCCATATGC---TCTTGTCCTGAGATGAAGTTAGAAGGGCTGTATCTTAGTAGTTGATGCTCCTTTTGTACTGGTAATTTAATCTGAAATACTGTTGCTCCTGTAGGCT Frederickena_unduligera AGGTTAGTGTGAAATAACTGTGTTGTTAAAATAACCAATTGATGGATGCTACAAAAAATAACTAGTGATTTGCATTTTATACAAACAAATATGGAGTGATACCTTTTGTAGTTACTTGAGAATTAAAT-TAACTCATTCAGGAAAGTCTCATTGGTCATCTGCTGATACATGGTTGCATACTTCTATAATGAAACTGGAAATAAACTGCATAGGTATCTTCTGTGACCAGAATGGATAATGTATATGTGGGCAGAGAAGAAGAGCCTGGCTCATTTCTTGCT-GTGCACTAGGCAAAAGAACAGGGCATTCCTTCAATTTCTGCTTTTTTTTCACCTTTCCTTATGAAGCAAGGTGCTAC-TTAAGTGTGAGCAAAAATCGCAAAGCTGAGGTCATAAGCAGTGAAGGACCTGCTGCAAGGAAGCCATATGCTCTTCTTGTCCTGAGATGAAGTTAGAAGGGCTGTATCTTAGTAGTTGATGCTCCTTTTGTACTGGCAATTTAATCTTAAATACTGTTGCTCCTGTAGGCT Sakesphorus_bernardi AGGTTAGTGTGAAATAACTGTGTTGTTAAAATATGAATT-GATGGATGCTACCAAAAATAATTAGTGATTTGCATTTTATACAAACAAGTATGGAGTGATACCTTTTGTAGTTATTTGAGAATTAAATCTATTTCATTCAGGAAAGTCTCGTTGGTCATCTGCTGATACATGGTTGCATACTTCTATAATGCAACTGGAAATAAACTGCATAGGTATCTTCCGTGACCAGAATGGATAACGTATATGTGGGCAGAGGAGAAGAGCCTGGCTCATTTCTTACT-ATGCACTAGGCAAAAGACCAGGGCATTCCTTCAATTTCTGCTT-TTTTCCACCTTTCCTTATGAAGCAAGGTACTAC-TTAAGTGTGAGCAAAAATCACAAAGCTGAGGTCATAAGCAGTGAAGGACCTGCTGCAAGGAAGCCATATGCTCTTCTTGTCCTGAGATGAAGTTAGAAGGGCTGTGTCTTAGTGGTTGATGCTTCTTTTGTACTGGCAATTTAATCCTAAATACTGTTGCTCCTGTAGGCT Sakesphorus_canadensis AGGTTAGTGTGAAATAACTGTGTTGTTAAAATATTAATT-GATGGAT-CTACCAAAAATAATTAGTGATTTGCATTTTATACAAACAAGTATGTAGTGATACCTTTTGTAGTTACTTGAGAATTAACTCTAACTCATTCAGGAAAGTCTCGYTGGTCATCTGCTGATACGTGGTTACATACTTCTATAATGAAACTGGAAATAAACTGCATAGGTATCTTCTGTGACCAGAACTGATAATGTATATGCGGGCAGAGAAGAAGAGCCTGGCTCATTTCTTACT-AGGCACTAGGCAAAAGACCAGGGCATTCCTTCAATTTCTGCTT-TTTTTCACCTTTCCTTATGAAGCAAGGTACTAC-TTAAGTGTGAGCAAAAATCGCAAAGCTGAGGTCATAAGCAGTGAAGGACCTGCTGCAAGGAAGCCATATCCTCTTCTTGTCCTGAGATGAAGTTAGAAGGGCTGTATCCTATTAGTTGATGCTCCTTTTGTACTGGCAATGTAATCTTAAATACTGTTGCTCCTGTAGGCT Sakesphorus_luctuosus AGGTTAGTGTGAAATAACTGTGTTGTTAAAATATTAATT-GATGGAT-CTGCCAAAAATAATTAGTGATTTGCATTTTATACAAACAAGTATGTAGTGATACCTTTTGTAGTTACTTGAGAATTAACTCTAACTCATTCAGGAAAGTCTCGTTGGTCATCTGCTGATACAGGGTTACATACTTCTATAATGAAACTGGAAATAAACTGCATAGGTATCTTCTGTGACCAGAACTGATAATGTATATGCGGGCAGAGAAGAAGAGCCTGGCTCATTTCTTACT-AGGCACTAGGCAAAAGACCAGGGCATTCCTTCAATTTCTGCTT-TTTTTCACCTTTCCTTATGAAGCAAAGTACTAC-TTAAGTGTGAGCAAAAATCGCAAAGCTGAGGTCATAAGCAGTGAAGGACCTGCTGCAAGGAAGCCATATCCTCTTCTTGTCCTGAGATGAAGTTAGAAGGGCTGTATCTTAGTAGTTGATGCTCCTTTTGTACTGGCAATGTAATCTTAAATACTGTTGCTCCTGTAGGCT Thamnomanes_caesius AGGTTAGTGTGAAATAACTGTGTTGTTAAAATATTAATT-GATGGATGCTACCAAAAATAAGTAGTGATTTGCATTTTATACAAACAAGTATGGAGTGATACCTTTCGTAGTTACTTGAGAATTAAATCTAACTCATTCAGGAAAGTCTCGTTGGTCATCTACTGATACGTGGTTGCATACTTCTATAATGAAACTGGAAATAAACTGCATAGGTATCTTCTGTGACCAGAATGGATAATGTATATGTGGGCAGAGAAGAAGAGCCTGGCTCATTTCTTACT-ATGCACTAGGCAAAAGACCAGAGCATTCCTTCAATTTCTGCTTTTTTTTAACCTTTCCTTATGAAGCAAGGTACTAC-TTAAGTGTGAGCAAAAATCGCAAAGCTGAGGTCATAAGCAGTGAAGGACCTGCTGCAAGGAAGCCATATGCTCTTCTTGTCCTGAGATGAAGTTAGAAGGGCTGTATCTTGGTAGTTGATGCTCCTTTTGTACTGGCAATTTAACCTTAAATACTGTTGCTCCTGCAGGCT Thamnophilus_aethiops AGGTTAGTGTGAAATAACTGTGTTGTTAAAATATTAATT-GATGGATGCTACCAAAAATAATTAGTGATTTGCATTTTATACAAACAAGTATGGAGTGATACCTTTTGTAGTTACTTGAGAATTAAATCTAACTTATTCAGGAAAGTCTCGCTGGTCATCTGCTGATACATGGTTGCATACTTCTATAATGCAACTGGAAATAAACTGCATAGGTATCTTCTGTGACCAGAATGGATAACGTATATGTGGGCAGAGGAGAAGAGCCTGGCTCATTTCTTACT-ATGCACTAGGCAAAAGACCAGGGCATTCCTTCAATTTCTGCTT-TTTTTCACCTTTCCTTATGAAGCAAAGTACTAC-TTAAGTGTGAGCAAAAATCGCAAAGCTGAGGTCATAAGCAGTGAAGGACTTGCTTCAAGGAAGCCATATGCTCTTCTTGTCCTGAGATGAAGTTAGAAGGGCTGTATCTTAGTAGTTGATGCTTCTTTTGTACTGGCAATTTAATCCTAAATACTGTTGCTCCTGCAGGCT Thamnophilus_amazonicus AGGTTAGTGTGAAATAACTGTCTTGTTAAAATATTAATT-GATGGATGCTTCCAAAAATAATTAGTGATTTGCATTTTATACAAACAAGTATGGAGTGATACCTTTTGTAGTTACTTGAGAATTAAATGTAACTCATTCAGGAAAGTCTCGCTGGTCATCTGCTGATACATGATTGCATACTTCTATAATGCAACTGGAAATAAACTGCATAGGTATCTTCTGTGACCAGAAYGGATAACGTATATGTGGGCAGAGGAGAAGAGCCTGGCTCATTTCTTACT-ATGCACTAGGCAAAAGACCAGGGCATTCCTTCAATTTCTGCTT-TTTTCCACCTTTCCTTATGAAGCAAGGTACTAC-TTAAGTGTGAGCAAAAATCGCAAAGCTGAGGTCATAAGCAGTGAAGGACCTGCTGCAAGGAAGCCATATGCTCTTCTTGTCCTGAGATGAAGTTAGAAGGGCTGTGTCTTAGTAGTTGATGCTTCTTTTGTACTGGCAATTTAATCCTAAATACTGTTGCTCCTGTAGGCT Thamnophilus_aroyae AGGTTAGTGTGAAATAACTGTGTTGTTAAAATATTAATT-GATGGATGCTACCAAAAATAATTAGTGATTTGCATTTTATACAAACAAGTATGGAGTGATACCTTTTGTAGTTACTTGAGAATTAAATCTAACTTATTCAGGAAAGTCTCGCTGGTCATCTGCTGATACATGGTTGCATACTTCTATAATGCAACTGGAAATAAACTGCATAGGTATCTTCTGTGACCAGAATGGATAACGTATATGTGGGCAGAGGAGAAGAGCCTGGCTCATTTCTTACT-ATGCATTAGGCAAAAGACCAGGGCATTCCTTCAATTTCTGCTT-TTTTTCACCTTTCCTTATGAAGCAAAGTACTAC-TTAAGTGTGAGCAAAAATCGCAAAGCTGAGGTCATAAGCAGTGAAGGACTTGCTTCAAGGAAGCCATATGCTCTTCTTGTCCTGAGATGAAGTTAGAAGGGCTGTATCTTAGTAGTTGATGCTTCTTTTGTACTGGCAATTTAATCCTAAATACTGTTGCTCCTGCAGGCT Thamnophilus_atrinucha AGGTTAGTGTGAAATAACTGTGTTGTTAAAATATGAATT-GATGGATGCTACCAAAAATAATTAGTGATTTGCATTTTATACAAACAAGTATGGAGTGATACCTTTTGTAGTTATTTGAGAATTAAATCTATTTCATTCAGGAAAGTCTCGTTGGTCATCTGCTGATACATGGTTGCATACTTCTATCATGCAACTGGAAATAAACTGCATAGGTATCTTCTGTGACCAGAATGGATAACGTATATGTGGGCAGAGGAGAAGAGCCTGGCTCATTTCTTACT-ATGCACTAGGCAAAAGACCAGGGCATTCCTTCAATTTCTGCTT-TTTTCCACCTTTCCTTATGAAGCAAGGTACTAC-TTAAGTGTGAGCAAAAATCGCAAAGCTGAGGTCATAAGCAGTGAAGGACCTGCTGCAAGGAAGCCATATGCTCTTCTTGTCCTGAGATGAAGTTAGAAGGGCTGTGTCTTAGTAGTTGATGCTTCTTTTGTACTGGCAATTTAATCCTAAATACTGTTGCTCTTGTAGGCT Thamnophilus_bridgesi AGGTTAGTGTGAAATAACTGTGTTGTTAAAATACGAATT-GATGGATGCTACCAAAAATAATTAGTGATTTACATTTTATGCAAACAAGTATGGAGTGATACCTTTTGTAGTTACTTGAGAATTAAATCTATTTCATTCAGGAAAGTCTCGTTGGTCATCTGCTGATACATGGTTGCATACTTCTATAATGAAACTGGAAATAAACTGCATAGGTATCTTCTGTRACCAGAATGGATAATGTATATGTGGGCAGAGGAGAAGAGCCTGGCTCATTTCTTACT-ATGCACTAGGCAAAAGACCAGGGCATTCCTTCAATTTCTGCTT-TTTTTCACCTTTCCTTATGAACCAAGGTACTAT-TTAAGTGTGAGCAAAAATCGCAAAGCTGAGGTCATAAGCAGTGAAGGACCTGCTGCAAGGAAGCCATATGCTCTTCTTGTCCTGAGATGAAGTTAGAAGGGCTGAGTCTTAGTAGTTGATGCTCCTTTTGTACTGGCAATGTAATCTTAAATACTGTTGCTCCTGCAGGCT Thamnophilus_caerulescens AGGTTAGTGTGAAATAACTGTGTTGTTAAAATATTAATT-GATGGATGCTACCAAAAATAATTAGTGATTTGCATTTTATACAAACAAGTATGTAGTGATACCTTTTGTAGTTACTTGAGAATTAAATGTAACTCATTCAGGAAGGTCTCGCTGGTCATCTGCTGATACATGGTTGCATACTTCTATAATGAAACTGGAAATAAACTGCATAGGTATCTTCTGTGACCAGAATGGATAACGTATATGTGGGCAGAGGAGAAGAGCCTGGCTYATTTCTTACT-ATGCACTAGGCAAAAGACCAGGGCATTCCTTCAATTTCTGCTT-TTTTTCACCTTTCCTTATGAAGCAAAGTACTAC-TTAAGTGTGAGCAAAAATCACAAAGCTGAGGTCATAAGCAGTGAAGGACTTGCTTCAAGGAAGCCATATGCTCTTCTTGTCCTGAGATGAAGTTAGAAGGGCTGTATCTTAGTAGTTGATGCTTCTTTTGTACTGGCAATTTAATTCTAAATACTGTTGCTCCTGCAGGCT Thamnophilus_cryptoleucus AGGTTAGTGTGAAATAACTGTGTTGTTAAAATATTAATT-GATGGATGCTACCAAAAATAATTAGTGATTTGCATTTTATACAAACAAGTATGGAGTGATACCTTTTGTAGTTACTTGAGAATTAAATCTAACTTATTCAGGAAAGTCTCGCTGGTCATCTGCTGATACATGGTTGCATACTTCTAGAATGAAACTGGAAATAAACTGCATAGGTACCTTCTGTGACCAGAATGGATAACGTATATGTGGGCAGAGGAGAAGAGCCTGGCTCATTTCTTACT-ATGCACTAGGCAAAAGACCAGGGCATTCCTTCAATTTCTGCTT-TTTTTCACCTTTCCTTATGAAGCAAAGTACTACTTTAAGTGTGAGCAAAAATCGCAAAGCTGAGGTCATAAGCAGTGAAGGACTTGCTTCAAGGAAGCCATATGCTCTTCTTGTCCTGAGATGAAGTTAGAAGGGCTGTATCTTAGTAGTTGATGCTTCTTTTGTACTGGCAATTTAATTCTAAATACTGTTGCTCCTGTAGGCT Thamnoophilus_doliatus AGGTTAGTGTGAAATAACTGTGTTGTTAAAATATTAATT-GATGGATGCTACCAAAAATAATTAGTGATTTGCATTTTATACAAACAAGTATGGAGTGATACCTTTTGTAGTTACTTGAGAATTAAATGTAACTCATTCAGGAAAGTCTCGTTGGTCATCTGCTGATACATGGTTGCATACTTCTATAATGCAACTGGAAATAAACTGCATAGGTATCTTCTGTGACCAGAATGGATAACGTATATGTGGGCAGAGGAGAAGAGCCTGGCTTATTTCTTACT-ATGCACCAGGCAAAAGACCAGGGCATTCCTTCAATTTCTGCTTTTTTTTCACCTTTCCTTACGAAGCAAGGTACTAC-TTAAGTGTGAGCAAAAATCGCAAAGCTGAGGTCATAAGCAGTGAAGGACCTGCTGCAAGGAAGCCATATGCTCTTCTTGTCCTGAGATGAAGTTAGAAGGGCTTTGTCTTAGTAGTTGATGCTTCTTTTGTACTGGCAATTTAATCCTAAATACTGTTGCTCCTGTAGGCT Thamnophilus_insignis AGGTTAGTGTGAAATAACTGTGTTGTTAAAATATGAATT-GATGGATGCTACCAAAAATAATTAGTGATTTACATTTTATACAAACAAGTATGGAGTGATACCTTTTGTAGTTACTTGATAATTAAATCTAACTCATTCAGGAAAGTCTCGCTGGTCATCTGCTGATACATGATTGCATACTTCTATAATGAAACTGGAAATAAACTGCATAGGTATCTTCTGTGACCAGAATGGATAATGTATATGTGGGCAGAGGAGAAGAGCCTGGCTGATTTCTTACT-ATGCACTAGGCAAAAGACCAGGGCATTCCTTCAATTTCTGGTT-TTTTTCACCTTTCCTTATGAAGCGAAGTACTAC-CTAAGTGTGAGCAAAAATCGCAAAGCTGAGGTCATAAGCAGTGAAGGACCTGCTGCAAGGAAGCCATATGCTCTTCTTGTCCTGAGATGAAGTTAGAAGGGCTGTATCTTAGTAGTTGATGCTTCTTTTGTACTGGCAATTTAATCCTAAATACTGTTGCTCCCGCAGGCT Thamnophilus_murinus AGGTTAGTGTGAAATAACTGTGTTGTTAAAATATTAATT-GATGGATGCTACCAAAAATAATTAGTGATTTGCATTTTATACAAACAAGTATGGAGTAATACCTTTTGTAGTTACTTGAGAATTAAATCTAACTCATTCAGGAAAGTCTCATTGGTCATCTGCTGATACATGGTTGCATACTTCTATAATGAAACTGGAAATAAACTGCATAGGTATCTTCTGTGACCAGAATGGATAACGTATATGTGGGCAGAAAAGAAGAGTCTGGCTCATTTCTTACTAATGCACTAGGCAAAAGACCAGGGCATTCCTTCAATTTCTGCTT-TTTTTCACCTTTCCTTATGAAGCAAGGTACTAT-TTAAGTGTGAGCAAAAATCGCAAAGCTGAGGTCATAAGCAGTGAAGGACCTGCTGCAAGGAAGCCATATGCTCTTCTTGTCCTGAGATGAAGTTAGAAGGGCTGTATCTTAGTAGTTGATGCTCCTTTTGTACCGGCAATATAATGTTAAATACTGCTGCTCCTGTAGGCT Thamnophilus_nigriceps AGGTTAGTGTGAAATAACTGTGTTGTTAAAATATTAATT-GATGGATGCTACCAAAAATAATTAGTGATTTGCATTTTATATAAACAAGTATGGAGTGATACCTTTTGTAGTTACTTGAGAATTAAATCTAACTTATTCAGGAAAGTCTCGCTGGTCATCTGCTGATACATGGTTGCAYACTTCTATAATGAAACTGGAAATAAACTGCATAGGTATCTTTTGTGACCAGAATGGATAACGTATATGTGGGCAGAGGAGGAGAGCCTGGCTCATTTCTTACT-ATGCACTAGGCAAAAGACCAAGGCATTCCTTCAATTTCTGCTT-TTTTTCACCTTTACTTATGAAGCAAAGTACTAC-TTAAGTGTGAGCAAAAATCGCAAAGCTGAGGTCATAAGCAGTGAAGGACTTGCTTCAAGGAAGCCATATGCTCTTCTTGTCCTGAGATGAAGTTAGAAGGGCTGTATCTTAGTAGTTGATGCTTCTTTTGTACTGGCAATTTAATCCTAAATACTGTTGCTCCTGCAGGCT Thamnophilus_nigrocinereus AGGTTAGTGTGAAATAACTGTGTTGTTAAAATATTAATT-GATGGATGCTACCAAAAATAATTAGTGATTTGCATTTTATACAAACAAGTATGGAGTGATACCTTTTGTAGTTACTTGAGAATTAAATCTAACTTATTCAGGAAAGTCTCGCTGGTCATCTGCTGATACRTGGTTGCATACTTCTAGAATGAAACTGGAAATAAACTGCATAGGTACCTTCTGTGACCAGAATGGATAACGTATATGTGGGCAGAGGAGAAGAGCCTGGCTCATTTCTTACT-ATGCACTAGGCAAAAGACCAGGGCATTCCTTCAATTTCTGCTT-TTTTTCACCTTTCCTTATGAAGCAAAGTACTAC-TTAAGTGTGAGCAAAAATCGCAAAGCTGAGGTCATAAGCAGTGAAGGACTTGCTTCAAGGAAGCCATATGCTCTTCTTGKCCTGAGATGAAGTTAGAAGGGCTGTATCTTAGTAGTTGATGCTTCTTTTGTACTGGCAATTTAATTCTAAATACTGTTGCTCCTRTAGGCT Thamnophilus_palliatus AGGTTAGTGTGAAATAACTGTGTTGTTAAAATATTAATT-GATGGATGCTACCAAAAATAATTAGCGATTTACATTTTATACGAACAAGTATGGAGTGATACCTTTTGTAGTTACTTGAGAATTAAATCTAACTCATTCAGGAAAGTCTCGTTGGTCATCTGCTGATACATGGTTGCATACTTCTACAATGCAACTGGAAATAAACTGCATAGGTATCTTCTGTGACCAGAATGGATAACGTATATGTGGGCAGAGGAGAAGAGCCTGGCTCATTTCTTACT-ATGCACCAGGCAAAAGACCAGGGCATTCCTTCAATTTCTGCTT-TTTTTCACCTTTCCTTATGAAGCAAGGTACTAT-TTAAGTGTGAGCAAAAATCGCAAAGCTAAGGTCATAAGCAGTGAAGGACCTGCTGCAAGGAAGCCATATGCTCTTCTTGTCCTGAGATGAAGTTAGAAGGGCTTTGTCTTAGTAGTTGATGCTTCTTTTGTACTGGCAATTTAATCCTAAATACTGTTGCTCCTGTAGGCT Thamnophilus_praecox AGGTTAGTGTGAAATAACTGTGTTGTTAAAATATTAATT-GATGGATGCTACCAAAAATAATTAGTGATTTGCATTTTATACAAACAAGTATGGAGTGATACCTTTTGTAGTTACTTGAGAATTAAATCTAACTTATTCAGGAAAGTCTCGCTGGTCATCTGCTGATACATGGTTGCATACTTCTATAATGAAACTGGAAATAAACTGCATAGGTATCTTCTGTGACCAGAATGGATAACRTATATGTGGGCAGAGGAGGAGAGCCTGGCTCATTTCTTACT-ATGCACTAGGCAAAAGACCAGGGCATTCCTTCAATTTCTGCTT-TTTTTCACCTTTCCTTATGAAGCAAAGTACTAC-TTAAGTGTGAGCAAAAATCGCAAAGCTGAGGTCATAAGCAGTGAAGGACTTGCTTCAAGGAAGCCATATGCTCTTCTTGTCCTGAGATGAAGTTAGAAGGGCTGTATCTTAGTAGTTGATGCTTCTTTTGTACTGGCAATTTAATCCTAAATACTGTTGCTCCTGCAGGCT Thamnophilus_punctatus AGGTTAGTGTGAAATAACTGTGTTGTTAAAATATTAATT-GATGGATGCTACCAAAAATAATTAGTGATTTGCATTTTATACAAACAAGTATGGAGTGATACTTTTTGTAGTTACTTAAGAATTAAATCTAACTCATTCAGGAAAGTCTCGCTGGTCATCTGCTGATACATGGTTGCATACTTCTAGAATGAAACTGGAAATAAACTGCATAGGTATCTTCTGTGACCAGAATGGATAACGTATATGTGGGCAGAGGAGAAGAGCCTGGCTCATTTCTTACT-ATGCACTAGGCAAAAGACCAGGGCATTCCTTCAATTTCTGCTT-TTTTTCACCTTTCCTTATGAAGCAAAGTACTAC-TTAAGTGTGAGCAAAAATCGCAAAACTGAGGTCATAAGCAGTGAAGGACTTGCTTCAAGGAAGCCATATGCTCTTCTTGTCCTGAGATGAAGTTAGAAGGGCTGTATCTTAGTAGTTGATGCTTCTTTTGTACTGGCAATTTAATCCTAAATACTGTTGCTCCTGCAGGCT Thamnophilus_stictocephalus AGGTTAGTGTGAAATAACTGTGTTGTTAAAATATTAATT-GATGGATGCTACCAAAAATAATTAGTGATTTGCATTTTATACAAACAAGTATGGAGTGATACCTTTTGTAGTTACTTGAGAATTAAATCTAACTCATTCAGGAAAGTCTCGCTGGTCATCTGCTGATACATGGTTGCATACTTCTAGAATGAAACTGGAAATAAACTGCATAGGTATCTTCTGTGACCAGAATGGATAACGTATATGTGGGCAGAGGAGAAGAGCCTGGCTCATTTCTTACT-ATGCACTAGGCAAAAGACCATGGCATTCCTTCAATTTCTGCTT-TTTTTCACCCTTCCTTATGAAGCAAAGTACTAC-TTAAGTGTGAGCAAAAATCGCAAAGCTGAGGTCATAAGCAGTGAAGGACTTGCTTCAAGGAAGCCATATGCTCTTCTTGTCCTGAGATGAAGTTAGAAGGGCTGTATCTTAGTAGTTGATGCTTCTTTTGAACTGGCAATTTAATCCTAAATACTGTTGCTCCTGCAGGCT Thamnophilus_ruficapillus AGGTTAGTGTGAAATAACTGTGTTGTTAAAATATTAATT-GATGGATGCTACCAAAAATAATTAGYGATTTACATTTTATACAAACAAGTATGGAGTGATACCTTTTGTAGTTACTTGAGAATTAAATCTAACTCATTCAGGAAAGTCTCGTTGGTCATCTGCTGATACATGGTTGCATACTTCTATAATGCAACTGGAAATAAACTGCATAGGTATCTTCTGTGACCAGAATGGATAATGTATATGTGGGCAGAGGAGAAGAGCCTGGCTCATTTCTTACT-ATGCACCAGGCAAAAGACCAGGGCATTCCTTCAATTTCTGCTT-TTTTTCAGCTTTCCTTATGACGCAAGGTACTAC-TTACGTGTGAGTAAAAATCGCAAAGCTGAGGTCATAAGCAGTGAAGGACCTGCTGCAAGGAAGCCATATGCTCTTCTTGTCCTGAGATGAAGTTAGAAGGGCTTTGTCTTAGTAGTTGATGCTTCTTTTGTACTGGCAATTTAATCYTAAATACTGTTGCTCCTGTAGGCT Thamnophilus_schistaceus AGGTTAGTGTGAAATAACTGTGTTGTTAAAATATTAATT-GATGGATGCTACAAAAAATAATTAGTGATTTGCATTTTATACAAACAAGTATGGAGTGATACCTTTTGTAGTTACTTGAGAATTAAATCTAACTCATTCAGGAAAGTCTCATTGGTCATCTGCTGATACATGGTTGCATACTTCTATAATGAAACTGGAAATAAACTGCATAGGTATCTTCTGTGACCAGAATGGATAACGTATATGTGGGCAAAGGAGAAGAGCCTGGCTCATTTCTTACT-ATGCACTAGGCAAAAGACCAGGGCATTCCTTCAATTTCTGCTT-TTTTTCACCTTTCCTTATGAAGCAAGGTACTAC-TTAAGTGTGAGCAAAAATCACAAAGCTGAGGTCATAAGCAGTGAAGGACCTGCTGCAAGGAAGCCATATCCTCTTCTTGTCCTGAGATGAAGTTAGAAGGGCTGTATCTTAGTAGTTGATGCTTCTTTTGTACTGGCAATTTAATCGTAAATACTGTTGCTCCTGTAGGCT Thamnophilus_tenuepunctatus AGGTTAGTGTGAAATAACTGTGTTGTTAAAATATTAATT-GATGGATGCTACCAAAAATAATTAGCGATTTACATTTTATACAAACAAGTATGGAGTGATACCTTTTGTAGTTACTTGAGAATTAAATCTAACTCATTCAGGAAAGTCTCGTTGGTCATCTGCTGATACATGGTTGCATACTTCTACAATGCAACTGGAAATAAACTGCATAGGTATCTTCTGTGACCAGAATGGATAACGTATATGTGGGCAGAGGAGAAGAGCCTGGCTCATTTCTTACT-ATGCACCAGGCAAAAGACCAGGGCATTCCTTCAATTTCTGCTT-TTTTTCACCTTTCCTTATGAAGCAAGGTACTAT-TTAAGTGTGAGCAAAAATCGCAAAGCTAAGGTCATAAGCAGTGAAGGACCTGCTGCAAGGAAGCCATATGCTCTTCTTGTCCTGAGATGAAGTTAGAAGGGCTTTGTCTTAGTAGTTGATGCTTCTTTTGTACTGGCAATTTAATCCTAAATACTGTTGCTCCTGTAGGCT Thamnophilus_torquatus AGGTTAGTGTGAAATAACTGTGTTGTTAAAATATTAATT-GATGGATGCTACCAAAAATAATTAGCGATTTACATTTTATACAAACAAGTATGGAGTGATACCTTTTGTAGTTACTTGAGAATTAAATCTAACTCATTCAGGAAAGTCTCGTTGGTCATCTGCTGATACATGGTTGCATACTTCTATAATGCAACTGGAAATAAACTGCATAGGTATCTTTTGTGACCAGAATGGATAACGTATATGTGGGCAGAGGAGAAGAGCCTGGCTCATTTCTTACT-ATGCACCAGGCAAAAGACCAGGGCATTCCTTCAATTTCTGCTT-TTTTTCAGCTTTCCTTATGACGCAAGGTACTAC-TTAAGTGTGAGCAAAAATCGCAAAGCTGAGGTCATAAGCAGTGAAGGACCTGCTGCAAGGAAGCCATATGCTCTTCTTGTCCTGAGATGAAGTTAGAAGGGCTTTGCCTTAGTAGTTGATGCTTCTTTTGTACTGGCAATTTAATCCTAAATACTGTTGCTCCTGTAGGCT Thamnophilus_unicolor AGGTTAGTGTGAAATAACTGTGTTGTTAAGATATTAATT-GATGGATGCTACCAAAAATAATTAGTGATTTGCATTTTATACAAACAAGTATGGAGTGATACCTTTTGTAGTTACTTGAGAATTAAATCTAACTTATTCAGGAAAGTCTCGCTGGTCATCTGCTGATACATGGTCGCATACTTCTATAATGCAACTGGAAATAAACTGCATAGGTATCTTCTGTGACCAGAATGGATAACGTATATGTGGGAAGAGGAGAAGAGCCTGGCTCATTTCTTACT-ATGCACTAGGCAAAAGACCAGGGCATTCCTTCAATTTCTGCTT-TTTTTCACCTTTCCTTATGAAGCAAAGTACTAC-TTAAGTGTGAGCAAAAATCGCAAAGCTGAGGTCATAAGCAGTGAAGGACTTGCTTCAAGGAAGCCATATGCTCTTCTTGTCCTGAGATGAAGTTAGAAGGGCTGTATCTTAGTAGTTGATGCTTCTTTTGTACTGGCAATTTAATCCTAAATACTGTTGCTCCTGCAGGCT Thamnophilus_zarumae AGGTTAGTGTGAAATAACTGTGTTGTTAAAATATTAATT-GATGGATGCTACCAAAAATAATTAGTGATTTACATTTTATACAAACAAGTATGGAGTGATACCTTTTGTAGTTACTTGAGAATTAAATGTAACTCATTCAGGAAAGTCTCGTTGGTCATCTGCTGATACATGGTTGCATACTTCTATAATGCAACTGGAAATAAACTGCATAGGTATCTTCTGTGACCGGAATGGATAACGTATATGTGGGCAGAGGAGAAGAGCCTGGCTCATTTCTTTCT-ATGCACTAGGCAAAAGACCAGGGCATTCCTTCAATTTCTGCTT-TTTTTCACCTTTCCTTATGAAGCAAGGTACTAC-TTAAGTGTGAGCAAAAATCGCAAAGCTGAGGTCATAAGCAGTGAAGGACCTGCTRCAAGGAAGCCATATGCTCTTCTTGTCCTGAGATGAAGTTAGAAGGGCTTTGTCTTAGTAGCTGATGCTTCTTTTGTACTGGCAATTTAATCCTAAATACTGTTGCTCCTGTAGGCT Thamnophilus_divisorius AGGTTAGTGTGAAATAACTGTGTTGTTAAAATATGNATT-GATGGATGCNACCAAAAATAATTAGTGATTTGCATTTTATACAAACAAGTATGGAGTGATAACTTTTGTAGTTACTTGAGAATTAAATCTAACTCATTCAGGAAAGTCTCGCTGGTCATCTGCTGATACATGGTTGCATACTTCTATAATGAAACTGGAAATAAACTGCATAGGTATCTTCTGTGACCAGAATGGATAACGTACATGTGGGCAGAGGAGAAGAGCCTGGCTGATTTCTTACT-ATGCACTAGGCMAAAGACCAGGGCATTCCTTCAATTTCTTTTT-TTTTTCACCTTTCCTTATGAAGCAAAGTACTAC-CTAAGTGTGAGCAAAAATCGCAAAGCTGAGGTCATAAGCAGTGAAGGACCTGCTGCAAGGAAGCCATATGCTCTTCTTGTCCTGARATGAAGTTAGAAGGGCTGTATCTTAGTAGTTGATGCTTCTTTTGTACTGGCAATTTAATCCTARATACTGTTGCTCCTGTAGGCT ; END; BEGIN CODONS; CODONPOSSET * CodonPositions = N: 1 - 532 ; CODESET * UNTITLED = Universal: all ; END; BEGIN ASSUMPTIONS; OPTIONS DEFTYPE = unord PolyTcount = MINSTEPS ; END;