#NEXUS
[written Mon Aug 24 23:58:01 BRT 2015 by Mesquite  version 3.04 (build 725) at fernando-HP-Pavilion-15-Notebook-PC/127.0.1.1]

BEGIN TAXA;
	TITLE Taxa;
	DIMENSIONS NTAX=10;
	TAXLABELS
		Thermoanaerobacter_siderophilus_EIW00256.1 'Caldanaerobacter subterraneus yonseiensis_ERM91217.1' 'Thermoanaerobacter wiegelii YP_004818841.1' Thermoanaerobacter_ethanolicus_EGD52033.1 Thermoanaerobacter_thermohydrosulfuricus_EMT39652.1 'Thermobrachium celere WP_018663230.1' 'Caloramator australicus WP_008908960.1' 'Fervidobacterium pennivorans YP_005472179.1' 'Thermotoga maritima NP_229019.1' 'Thermotoga sp. YP_001739623.1' 
	;

END;


BEGIN CHARACTERS;
	TITLE  Character_Matrix;
	DIMENSIONS  NCHAR=198;
	FORMAT DATATYPE = Protein GAP = - MISSING = ?;
	MATRIX
	Thermoanaerobacter_siderophilus_EIW00256.1            MEDLKANDKRSYIDNLIDFFRKRSIWILHYCTGCGAVELPPSMTSRWDIERFGIVPMATPRQADVLLVTGYVSLKTLKRIIKIYEQMPEPKWVLAFGSCTVNGGIYWDSYNTITNLAEYIPVDITVSGCMPRPEAVIDALQTLMEMIQSGEGGAYKKYKENYEYYKKNQDRVLRKEAPILGSSETESIYQEKEGNYET
	'Caldanaerobacter subterraneus yonseiensis_ERM91217.1' MEDLKANDKRSYIDNLIDFFRKRSIWILHYCTGCGAVELPPSMTSRWDIERFGIVPMATPRQADVLLVTGYVSLKTLKRIIKIYEQMPEPKWVLAFGSCTVNGGIYWDSYNTITNLAEYIPVDITVSGCMPRPEAVIDALQTLMEMIQSGEGGAYKKYKENYEYYKKNQDRVLRKEAPILGSSETESIYQEKEGNYET
	'Thermoanaerobacter wiegelii YP_004818841.1'          MEDLKANDKRSYIDNLIDFFRKRSIWILHYCTGCGAVELPPSMTSRWDIERFGIVPMATPRQADVLLVTGYVSLKTLKRIIKIYEQMPEPKWVLAFGSCTVNGGIYWDSYNTITNLAEYIPVDITVSGCMPRPEAVIDALQTLMEMIQSGEGGAYKKYKENYEYYKKNQDRVLRKTAPILGSSETESIYQEKEGNYET
	Thermoanaerobacter_ethanolicus_EGD52033.1             MEDLKANDKRSYIDNLIDFFRKRSIWMLHYCTGCGAVELPPSMTSRWDIERFGIVPMATPRQADVLLVTGYVSLKTLKRIIKIYEQMPEPKWVLAFGSCTVNGGIYWDSYNTITNLAEYIPVDITVSGCMPRPEAVIDALQTLMEMIQSGEGGAYKKYKENYEYYKKNQDRVLRKTAPILGSSETESIYQEKEGNYET
	Thermoanaerobacter_thermohydrosulfuricus_EMT39652.1   MEDLKANDKRSYIDNLIDFFRKRSIWMLHYCTGCGAVELPPSMTSRWDIERFGIVPMATPRQADVLLVTGYVSLKTLKRIIKIYEQMPEPKWVLAFGSCTVNGGIYWDSYNTITNLAEYIPVDITVSGCMPRPEAVIDALQTLMEMIQSGEGGAYKKYKENYEYYKKNQDRVLRKTAPILGSSETESIYQEKEGNYET
	'Thermobrachium celere WP_018663230.1'                ------------------------------------MELPPAMTSRWDVERFGVGPMATPRQADVLLVTGYVSLKTLKRIIRTYEQMPEPKWVLAFGSCTVNGGIYWDSYNTITNLAEYIPVDITVSGCMPRPEAVIDALQTLMKMIQSGEAGAYKKYKENYEYYKANQDRVLKKTVPVLGQTPKNDLEGKDEDAKE-
	'Caloramator australicus WP_008908960.1'              ------------------------------------------MTSRWDVERFGIGPMATPRQADVLLVTGYVSLKTLKRIIRTYEQMPEPKWVLAFGSCTVNGGIYWDSYNTITNLAEYIPVDITVSGCMPRPEAVMDALQTLMKMIQSGEAGAYKKYKENYEYYKANQDRVLRKTYPILGEKLIQNEEAATSIE---
	'Fervidobacterium pennivorans YP_005472179.1'         ---MAQIDERSVWEKIADQLRSRSMWMLHYCTGCGAVELPPSMTSRFDMERLGMGPMATPRQADILLITGYLSAKTLRRVIYTYEKMADPKYVIGFGSCTINGGIYYDSYSTINRLDYYIPVDLYIAGCMPRPEAILNAFNTLMEMIRKGEANGWKRYKENYEWYKQNQIRS-------LGEVIVHDEFHE-------
	'Thermotoga maritima NP_229019.1'                     ------MKERSIWERIADNLRSRSIWMLHYCTGCGAVELPPSMTSRFDMERFGIAPMATPRQADILLITGYLNTKTLRRVIYTYEQMPDPKYVVGFGSCTINGGIYFDSYATVNRLDYYIPVDVYIAGCMPRPEAILEAFNYLMEKIRKGEADGWKRYRENYEWYKQNQIRS-------LGEVYVHDEFHE-------
	'Thermotoga sp. YP_001739623.1'                       ------MKERSIWERIADNLRSRSIWMLHYCTGCGAVELPPSMTSRFDMERFGIAPMATPRQADILLITGYLNTKTLRRVIYTYEQMPDPKYVVGFGSCTINGGIYFDSYATVNRLDYYIPVDVYIAGCMPRPEAILEAFNYLMEKIRKGEADGWKRYRENYEWYKQNQIRS-------LGEVYVNDEFHE-------

;


END;

BEGIN ASSUMPTIONS;
	TYPESET * UNTITLED   =  unord:  1 -  198;

END;

BEGIN NOTES;

	TAXABITS   TAXA = Taxa NAME = newlyAddedTaxon on =  1 -  10;

END;

BEGIN CODONS;
	CODESET * UNTITLED   =  universal:  1 -  198;


END;

BEGIN MESQUITECHARMODELS;
	ProbModelSet * UNTITLED   =  'Mk1 (est.)':  1 -  198;
END;

BEGIN TREES;
	Title 'Trees from "MbxJ.tre"';
	LINK Taxa = Taxa;
	TRANSLATE
[0] 		n0 Thermoanaerobacter_siderophilus_EIW00256.1,
[1] 		n1 'Caldanaerobacter subterraneus yonseiensis_ERM91217.1',
[2] 		n2 'Thermoanaerobacter wiegelii YP_004818841.1',
[3] 		n3 Thermoanaerobacter_ethanolicus_EGD52033.1,
[4] 		n4 Thermoanaerobacter_thermohydrosulfuricus_EMT39652.1,
[5] 		n5 'Thermobrachium celere WP_018663230.1',
[6] 		n6 'Caloramator australicus WP_008908960.1',
[7] 		n7 'Fervidobacterium pennivorans YP_005472179.1',
[8] 		n8 'Thermotoga maritima NP_229019.1',
[9] 		n9 'Thermotoga sp. YP_001739623.1';
	TREE tree_1 = (((((n3:0.000001,(n2:0.000001,(n1:0.000001,n0:0.000001)0.0000:0.000001)0.0000:0.000001)0.0000:0.000001,n4:0.000001)0.9980:0.131412,n5:0.042513)0.2180:0.053654,n6:0.001685)1.0000:0.249506,(n7:0.048713,(n9:0.007237,n8:0.000001)0.9500:0.100093)1.0000:0.327246)root;

END;


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