#NEXUS
[written Tue Aug 25 00:03:40 BRT 2015 by Mesquite  version 3.04 (build 725) at fernando-HP-Pavilion-15-Notebook-PC/127.0.1.1]

BEGIN TAXA;
	TITLE Taxa;
	DIMENSIONS NTAX=9;
	TAXLABELS
		'Caldanaerobacter subterraneus yonseiensis_ERM91258.1' 'Caloramator australicus WP_008908961.1' Thermoanaerobacter_ethanolicus_EGD52032.1 Thermoanaerobacter_siderophilus_EIW00257.1 Thermoanaerobacter_thermohydrosulfuricus_EMT39682.1 'Thermoanaerobacter wiegelii YP_004818842.1' 'Thermobrachium celere WP_018663228.1' 'Thermosipho africanus YP_002335463.1' 'Thermosipho melanesiensis YP_001306459.1' 
	;

END;


BEGIN CHARACTERS;
	TITLE  Character_Matrix;
	DIMENSIONS  NCHAR=176;
	FORMAT DATATYPE = Protein GAP = - MISSING = ?;
	MATRIX
	'Caldanaerobacter subterraneus yonseiensis_ERM91258.1' MKLDKESIIELLNQ--KGVEVLDLYPNQISVNIKKDNLLNHLVFLRSIGFDHLSFINAVDFIDEGEFELVYHVWSYTHKIHILNKVRISRTNPVIPTIVNLWEQAQFYEQEIHEFFGITFEGNKDLSPLFLENWVDIPPLRKDFDTKEFSARLFGAEIRR----------------
	'Caloramator australicus WP_008908961.1'              MKLSKEEIIDLLKQ--RGLEVNDLYPTQISVIVNKENLINHLVYLKSIGFDHLSFINAVDFIDEGEFELVYHVWSYTNKVHVLNKVRIDRNDPKIPTIVDLWEQAQFYEQEVHEFFGIVFEGNKDLSPLFLENWLDIPPLRKDFDTREFSIRLFDAKPNGGDR-------------
	Thermoanaerobacter_ethanolicus_EGD52032.1             MKLDKESIIELLNQ--KGVEVLDLYPNQISVNIKKDNLLNHLVFLRSIGFDHLSFINAVDFIDEGEFELVYHVWSYTHKIHVLNKVRISRNNPVIPTIVNLWEQAQFYEQEIHEFFGIIFEGNKDLSPLFLENWVDIPPLRKDFDTKEFSVRLFGAEIRR----------------
	Thermoanaerobacter_siderophilus_EIW00257.1            MKLDKESIIELLNQ--KGVEVLDLYPNQISVNIKKDNLLNHLVFLRSIGFDHLSFINAVDFIDEGEFELVYHVWSYTHKIHILNKVRISRTNPVIPTIVNLWEQAQFYEQEIHEFFGITFEGNKDLSPLFLENWVDIPPLRKDFDTKEFSARLFGAEIRR----------------
	Thermoanaerobacter_thermohydrosulfuricus_EMT39682.1   MKLDKESIIELLNQ--KGVEVLDLYPNQISVNIKKDNLLNHLVFLRSIGFDHLSFINAVDFIDEGEFELVYHVWSYTHKIHVLNKVRISRNNPVIPTIVNLWEQAQFYEQEIHEFFGIIFEGNKDLSPLFLENWVDIPPLRKDFDTKEFSVRLFGAEIRR----------------
	'Thermoanaerobacter wiegelii YP_004818842.1'          MKLDKESIIELLNQ--KGVEVLDLYPNQISVNIKKDNLLNHLVFLRSIGFDHLSFINAVDFIDEGEFELVYHVWSYTHKIHVLNKVRISRNNPVIPTIVNLWEQAQFYEQEIHEFFGIIFEGNKDLSPLFLENWVDIPPLRKDFDTKEFSVRLFGAEIRR----------------
	'Thermobrachium celere WP_018663228.1'                --MQKSDIVKLLLD--RGYSVFDLYHNQIALAVKKENLLNDLIFLRSIGFEHLSFITAVDFIDEGEFEVVYHIWSYTHKVHILVKVRVDRNNPVVPTIINLWEQAQFYEQEVHEFFGIKFEGNNDLSPLFLENWVDIPPLRKDFDTREFSIRLYDAEVDGGDR-------------
	'Thermosipho africanus YP_002335463.1'                MTNSMNNALEKLKSLIGEFELIEIDEREVKINLKPESVLQALSLLKGEGYFHLSLLSAVDWIDERKFELVYILYSWNDGGKIIVSTKIDRDKAEFVTVKHMWPVARFYERELHEFFGISFKGNDDMRPLFLENWDDLPPLRKDFDPLEYSKRKFPDREYKKDVIHEAKIIRGDING
	'Thermosipho melanesiensis YP_001306459.1'            MTSFMSDVIKKIEKIFNDIEIVEIDSREIKINVKPESIVSILSMLKGEGYSHLSLLTAVDWIEENKFELVYILFSWKDGSKIIVSTKIERGNSQFVTVKHLWSIARYYEREIHEFFGINFEGNDDMKPLFLENWDDIPPLRKDFDPMEYSRKKFPDREYKKDVIHEAKIIRGDLNG

;


END;

BEGIN ASSUMPTIONS;
	TYPESET * UNTITLED   =  unord:  1 -  176;

END;

BEGIN NOTES;

	TAXABITS   TAXA = Taxa NAME = newlyAddedTaxon on =  1 -  9;

END;

BEGIN CODONS;
	CODESET * UNTITLED   =  universal:  1 -  176;


END;

BEGIN MESQUITECHARMODELS;
	ProbModelSet * UNTITLED   =  'Mk1 (est.)':  1 -  176;
END;

BEGIN TREES;
	Title 'Trees from "MbxK.tre"';
	LINK Taxa = Taxa;
	TRANSLATE
[0] 		n0 'Caldanaerobacter subterraneus yonseiensis_ERM91258.1',
[1] 		n1 'Caloramator australicus WP_008908961.1',
[2] 		n2 Thermoanaerobacter_ethanolicus_EGD52032.1,
[3] 		n3 Thermoanaerobacter_siderophilus_EIW00257.1,
[4] 		n4 Thermoanaerobacter_thermohydrosulfuricus_EMT39682.1,
[5] 		n5 'Thermoanaerobacter wiegelii YP_004818842.1',
[6] 		n6 'Thermobrachium celere WP_018663228.1',
[7] 		n7 'Thermosipho africanus YP_002335463.1',
[8] 		n8 'Thermosipho melanesiensis YP_001306459.1';
	TREE tree_1 = ((((((n2:0.000001,n5:0.000001)0.0000:0.000001,n4:0.000001)0.0000:0.000001,(n0:0.000001,n3:0.000001)0.9190:0.02545)0.9490:0.107142,n1:0.138988)0.3360:0.074339,n6:0.173433)1.0000:0.65271,(n7:0.280428,n8:0.103599)1.0000:0.585609)root;

END;


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