#NEXUS
[written Tue Aug 25 00:22:59 BRT 2015 by Mesquite  version 3.04 (build 725) at fernando-HP-Pavilion-15-Notebook-PC/127.0.1.1]

BEGIN TAXA;
	TITLE Taxa;
	DIMENSIONS NTAX=9;
	TAXLABELS
		'Caldanaerobacter subterraneus yonseiensis_ERM91257.1' Thermoanaerobacter_ethanolicus_EGD52034.1 Thermoanaerobacter_siderophilus_EIW00255.1 'Thermoanaerobacter wiegelii YP_004818840.1' Thermoanaerobacter_thermohydrosulfuricus_EMT39674.1 Caloramator_australicus_CCJ33695.1 'Thermobrachium celere WP_018663232.1' 'Thermosipho africanus YP_002335465.1' 'Thermosipho africanus WP_004102514.1' 
	;

END;


BEGIN CHARACTERS;
	TITLE  Character_Matrix;
	DIMENSIONS  NCHAR=302;
	FORMAT DATATYPE = Protein GAP = - MISSING = ?;
	MATRIX
	'Caldanaerobacter subterraneus yonseiensis_ERM91257.1' ----MIAAIRVFGYSLFAIFIGLLFMGIGRKIIARIQLRLGPPFYQAFLDVGKLFAKKSITHNFVMDLGMIMSLAGLLSTMLFVPIAGHMAIKSSSNLILIIYLMAIGHLGMAMAAAASGNPNATIGVSRALTMMLGYEIPFFTVMLGLIIFNGTSSLELIAQSQAGGLLNWNMVKFPLGFLAAEIALQAIMGEKPFDAMVAPAEIASGPMVELGGKYLGLAFLTHAVSIFVETGIMVNLFMGGASNVFTFVLKQFEIYLITVLIEAVFPRFRIEQAVKFLWTVPMSIAVVQLAIILL----
	Thermoanaerobacter_ethanolicus_EGD52034.1             ----MIAAIRVFGYSLFAIFIGLLFMGIGRKIIARIQLRLGPPFYQAFLDVGKLFARKSITHNFVMDLGMIMSLAGLLSTMLFVPVAGHMAIKSSSNLILIIYLMAIGHLGMAMAASASGNPNATIGVSRALTMMLGYEIPFFTVMLGLIIFNGTSSLELIAQSQAGGLLNWNMVKFPLGFLAAEIALQAIMGEKPFDAMVAPAEIASGPMVELGGKYLGLAFLTHAVSIFVETGIMVNLFMGGASNVFTFVLKQFEIYLITVLIEAVFPRFRIEQAVKFLWTVPMSIAVVQLAIILL----
	Thermoanaerobacter_siderophilus_EIW00255.1            ----MIAAIRVFGYSLFAIFIGLLFMGIGRKIIARIQLRLGPPFYQAFLDVGKLFARKSITHNFVMDLGMIMSLAGLLSTMLFVPVAGHMAIKSSSNLILIIYLMAIGHLGMAMAASASGNPNATIGVSRALTMMLGYEIPFFTVMLGLIIFNGTSSLELIAQSQAGGLLNWNMVKFPLGFLAAEIALQAIMGEKPFDAMVAPAEIASGPMVELGGKYLGLAFLTHAVSIFVETGIMVNLFMGGASNVFTFVLKQFEIYLITVLIEAVFPRFRIEQAVKFLWTVPMSIAVVQLAIILL----
	'Thermoanaerobacter wiegelii YP_004818840.1'          ----MIAAIRVFGYSLFAIFIGLLFMGIGRKIIARIQLRLGPPFYQAFLDVGKLFARKSITHNFVMDLGMIMSLAGLLSTMLFVPVAGHMAIKTSSNLILIIYLMAIGHLGMAMAASASGNPNATIGVSRALTMMLGYEIPFFTVMLGLIIFNGTSSLELIAQSQAGGILNWNMVKFPLGFLAAEIALQAIMGEKPFDAMVAPAEIASGPMVELGGKYLGLAFLTHAVSIFVETGIMVNLFMGGASNVFTFVLKQFEIYLITVLIEAVFPRFRIEQAVKFLWTVPMSIAVVQLAIILL----
	Thermoanaerobacter_thermohydrosulfuricus_EMT39674.1   ----MIAAIRVFGYSLFAIFIGLLFMGIGRKIIARIQLRLGPPFYQAFLDVGKLFARKSITHNFVMDLGMIMSLAGLLSTMLFVPVAGHMAIKTSSNLILIIYLMAIGHLGMAMAASASGNPNATIGVSRALTMMLGYEIPFFTVMLGLIIFNGTSSLELIAQSQAGGILNWNMVKFPLGFLAAEIALQAIMGEKPFDAMVAPAEIASGPMVELGGKYLGLAFLTHAVSIFVETGIMVNLFMGGASNVFTFVLKQFEIYLITILIEAVFPRFRIEQAVKFLWTVPMSIAVVQLAIILL----
	Caloramator_australicus_CCJ33695.1                    ----MIEILRVFLFGFFAIFIGLFFMGIGRKIIARIQLRLGPPFYQAFLDVGKLFSRKSITHNFVMDLGMVMSLAGLVATMLFVPIAGHTAIKTSSNLIVIMYLMAIGYLGMAMAVAASGNPNATIGVSRALTMMLGYEVPFFTVMLGLIIINGTSSLELIANSQAGSILNWNMIKFPLGFIAAEIALQAMMGEKPFDAMIAPAEIASGPMVELSGKYLGLAFLTHAVSIFVETAIIVNLFMGGASNIFTFVLKQFEIYLITVIIEAVFPRFKIEQAVKFLWTVPMSIALLQLVLIVF----
	'Thermobrachium celere WP_018663232.1'                ----MMAVLRVFLFGIFAIFIGLLFMGIGRKVIARIQLRYGPPFYQAFLDVGKLFARKSITHNFVMDLGMVMALGGLLATMLFVPIAGHVAVKTSTNLIVIMYLMAIGYLGMAMAVAASGNPNATIGVSRALTMMLGYEVPFFTVILGLIIVNGTSSLELISQSQAGSILNWNMIKFPLAFIAAEIALQAMMGEKPFDAMIAPAEIASGPMVELSGKYLGLAFLTHAVSIFVETAIIVNLFMGGASNIFTFVLKQFEIYLITIFIEAVFPRFKIEQAVKFLWTVPIGIAVLQLLLILL----
	'Thermosipho africanus YP_002335465.1'                ---MINTILKVMAVLFTGFFVGLTLEGVARKVIARIQRRYGPPWYQNFIDLFKTFSKHGITHGWIFDFGVLMALGGTIATLAFVPLGNLIAFPGLDNVFIILYLWAIGALGMAMGMVGSGNPNASIGVARALTQMMGYEVPYLVVLAGVMFYYKTSSVSALMYSQADK---WTLLKMPIGGIIAFVSLMGMLGKKPFDTPIAPAEIASGPMVELSAKYMGLLMLMHTFSIFVEISMFVNIFL-GISNYFTFLIKFTIVWILATMISAVLPRFRIEQVVKFYWKVPLSLAFVQVLFVLLGWVF
	'Thermosipho africanus WP_004102514.1'                ---MINTVLKVAAVLFTGFFVGLTLEGVARKITARIQRRYGPPWYQNFIDLFKTLSKHGITHGWIFDFGVLMALGGTIATLAFVPLGNLVAFPGLDNVFIILYLFTVGALGMAMGMVGSGNPNASIGVARALTQMLGYEIPYLVVLSGVMFYYKTSSVSGLMNAQADG---WTLIKMPIGAIIAFVSLMGMLGKKPFDTPIAPAEIASGPMVEVSSKYMGLLMLMHTFSVFVEIAMFVNIFL-GVSNYFTFLLKFVVVWIIATMISAVLPRFRIEQVVKFYWSVPLSLAFVQVLFVLLGWVF

;


END;

BEGIN ASSUMPTIONS;
	TYPESET * UNTITLED   =  unord:  1 -  302;

END;

BEGIN NOTES;

	TAXABITS   TAXA = Taxa NAME = newlyAddedTaxon on =  1 -  9;

END;

BEGIN CODONS;
	CODESET * UNTITLED   =  universal:  1 -  302;


END;

BEGIN MESQUITECHARMODELS;
	ProbModelSet * UNTITLED   =  'Mk1 (est.)':  1 -  302;
END;

BEGIN TREES;
	Title 'Trees from "MbxM.tre"';
	LINK Taxa = Taxa;
	TRANSLATE
[0] 		n0 'Caldanaerobacter subterraneus yonseiensis_ERM91257.1',
[1] 		n1 Thermoanaerobacter_ethanolicus_EGD52034.1,
[2] 		n2 Thermoanaerobacter_siderophilus_EIW00255.1,
[3] 		n3 'Thermoanaerobacter wiegelii YP_004818840.1',
[4] 		n4 Thermoanaerobacter_thermohydrosulfuricus_EMT39674.1,
[5] 		n5 Caloramator_australicus_CCJ33695.1,
[6] 		n6 'Thermobrachium celere WP_018663232.1',
[7] 		n7 'Thermosipho africanus YP_002335465.1',
[8] 		n8 'Thermosipho africanus WP_004102514.1';
	TREE tree_1 = ((((((n2:0.000001,n1:0.000001)0.0000:0.000001,(n4:0.003467,n3:0.000001)0.7510:0.003468)0.3250:0.007018,n0:0.003404)1.0000:0.110872,n5:0.038538)0.5820:0.027712,n6:0.035318)1.0000:0.3922795,(n8:0.055866,n7:0.051464)1.0000:0.4889505)root;

END;


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end;