#NEXUS
[written Sun Aug 23 22:34:11 BRT 2015 by Mesquite  version 3.04 (build 725) at fernando-HP-Pavilion-15-Notebook-PC/127.0.1.1]

BEGIN TAXA;
	TITLE Taxa;
	DIMENSIONS NTAX=8;
	TAXLABELS
		'Caldanaerobacter subterraneus pacificus_CDSM653_01578' 'Caldanaerobacter subterraneus tengcongensis_NP_623294.1' 'Caldanaerobacter subterraneus yonseiensis_WP_022587807.1' 'Escherichia coli WP_001291921.1' Geobacillus_sp._Y4.1MC1_YP_003989198.1 'Geobacillus thermoglucosidasius WP_003250309.1' 'Moorella thermoacetica YP_431015.1' 'Thermoanaerobacter sp. YS13 THYS13_RS04620' 
	;

END;


BEGIN CHARACTERS;
	TITLE  Character_Matrix;
	DIMENSIONS  NCHAR=151;
	FORMAT DATATYPE = Protein GAP = - MISSING = ?;
	MATRIX
	'Caldanaerobacter subterraneus pacificus_CDSM653_01578'   MPGKVKFFKLSKRFVD---EKDA-PAEVEQLKYYALAIGHHIGIVDCLSPVMTMEEKDYLEWISKFPPG-KVRRKLEGLTKWGEIEINREHVALLVSTLSQAFPSFLPEEKEWANCLLKLLHSIQKEPAIYVVVRLSEENSDYCRQ-----
	'Caldanaerobacter subterraneus tengcongensis_NP_623294.1' MPGKVKFFKLSKRFVD---EKDA-PAEVEQLKYYALAIGHHIGIVDCLSPVMTMEEKDYLEWISKFPPG-KVRRKLEGLTKWGEIEINREHVALLVSTLSQAFPSFLPEEKEWANCLLKLLHSIQKEPAIYVVVRLSEENSDYCRQ-----
	'Caldanaerobacter subterraneus yonseiensis_WP_022587807.1' MPGKVKFFKLSKRFVD---EKDA-PAEVEQLKYYALAIGHHIGIVDCLSPVMTMEEKDYLEWISKFPPG-KVRRKLEGLTKWGEIEINREHVALLVSALSQAFPSFLPEEKEWANCLLKLLHSIQKEPAIYVVVRLSEENSDYCRQ-----
	'Escherichia coli WP_001291921.1'                         MSEKVVFSQLSRKFID---ENDATPAEAQQVVYYSLAIGHHLGVIDCLEAALTCPWDEYLAWIATLEAGSEARRKMEGVPKYGEIVIDINHVPMLANAFDKARAAQTSQQQEWSTMLLSMLHDIHQENAIYLMVRRLRD------------
	Geobacillus_sp._Y4.1MC1_YP_003989198.1                    MPGKVKFFKLYKKFVDEGNENNV-APEVKQLKYYALAIGHHIGVVDCLSPVMVIEKEDYFNWIGKLPQG-KAKRKLEGLAKWGELEINRDHVAALGSALSEADPSFLPEEKKWANNLLQLLQMIKKEPAVYLVVRLSEEVSDYSR------
	'Geobacillus thermoglucosidasius WP_003250309.1'          MPGKVKFFKLYKKFVDEGNENNV-APEVKQLKYYALAIGHHIGVVDCLSPVMVIEKEDYFNWIGKLPQG-KAKRKLEGLAKWGELEINRDHVAALGSALSEADPSFLPEEKKWANNLLQLLQMIKKEPAVYLVVRLSEEVSDYSR------
	'Moorella thermoacetica YP_431015.1'                      MPGRVEFYKLCKRFVD---EKDV-PAEVQQLEYYALAIGHHIGVVDCLASIMAMDKEAYFKWISKLPRG-KARSKLEGLARWGELEINKEHVPALIAALEEANASFLPEEKQWTDCLLRLLYAMEKEPAIYLVVRLSEGASDYCRQRTDGR
	'Thermoanaerobacter sp. YS13 THYS13_RS04620'              MPGKVKFFKLSKRFVD---KKDV-PAEVEQLKYYALAIGHHIGIVDCLSPVMTMEEKDYLEWISKFPPG-KIRRKLEGLTKWGEIEINREHVALLVSTLSQAFPSFLPEEKEWANCLLKLLHSIQKEPAIYVVVRLSEENSDYCRQ-----

;


END;

BEGIN ASSUMPTIONS;
	TYPESET * UNTITLED   =  unord:  1 -  151;

END;

BEGIN NOTES;

	TAXABITS   TAXA = Taxa NAME = newlyAddedTaxon on =  1 -  8;

END;

BEGIN CODONS;
	CODESET * UNTITLED   =  universal:  1 -  151;


END;

BEGIN MESQUITECHARMODELS;
	ProbModelSet * UNTITLED   =  'Mk1 (est.)':  1 -  151;
END;

BEGIN TREES;
	Title 'Trees from "hycH.tre"';
	LINK Taxa = Taxa;
	TRANSLATE
[0] 		n0 'Caldanaerobacter subterraneus pacificus_CDSM653_01578',
[1] 		n1 'Caldanaerobacter subterraneus tengcongensis_NP_623294.1',
[2] 		n2 'Caldanaerobacter subterraneus yonseiensis_WP_022587807.1',
[3] 		n3 'Escherichia coli WP_001291921.1',
[4] 		n4 Geobacillus_sp._Y4.1MC1_YP_003989198.1,
[5] 		n5 'Geobacillus thermoglucosidasius WP_003250309.1',
[6] 		n6 'Moorella thermoacetica YP_431015.1',
[7] 		n7 'Thermoanaerobacter sp. YS13 THYS13_RS04620';
	TREE tree_1 = (((((n7:0.02258,(n1:0.000001,n0:0.000001)0.000000:0.000001)0.769000:0.0075,n2:0.000001)0.859000:0.081603,n3:0.787115)0.669000:0.07516,n6:0.246855)0.996000:0.178489,n5:0.000001,n4:0.000001)root;

END;


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end;