#NEXUS [written Sun Sep 06 12:18:46 CST 2015 by Mesquite version 3.01 (build 658) at TOSHIBA/192.168.0.100] BEGIN TAXA; TITLE Taxa; DIMENSIONS NTAX=41; TAXLABELS Alliaria_petiolata Arabidopsis_lyrata Alyssum_alyssoides Arabidopsis_thaliana Barbarea_vulgaris Brassica_rapa Aethionema_subulatum Iberis_gibraltarica Physaria_newberryi Boechera_canadensis Turritis_glabra Cleome_serrulata Sisymbrium_officinale Rorippa_sylvestris Erysimum_cheiri Aethionema_grandiflorum Camelina_sativa Cardamine_pensylvanica Chorispora_bungeana Capsella_rubella Catolobus_pendulus Hesperis_matronalis Coincya_monensis Erysimum_cheiranthoides Brassica_nigra Rorippa_globosa Berteroa_incana Cakile_maritima Lobularia_maritima Hirschfeldia_incana Raphanus_raphanistrum Iberis_sempervirens Lepidium_campestre Lunaria_annua Parrya_nudicaulis Lepidium_didymum Eutrema_salsugineum Thlaspi_arvense Schrenkiella_parvula Smelowskia_tibetica Thlaspi_alliaceum ; END; BEGIN CHARACTERS; TITLE Character_Matrix; DIMENSIONS NCHAR=567; FORMAT DATATYPE = DNA INTERLEAVE GAP = - MISSING = ?; MATRIX Alliaria_petiolata ATGCGAATTCTCGCTGCTCGCGTAGCTAACCATTTTTGCAGAGGAAGGGA Arabidopsis_lyrata ATGCGGATTCTTGCTGCTCGCATAGCTAACCATTTTTGCAGGGCACGAAA Alyssum_alyssoides ATGCGACTTCTTGCTGCTCGCTTCGCTAACCATTTTCGCTTAGGAAGAAA Arabidopsis_thaliana ATGCGGATTCTTACTGCTCGCATAGCTAACCATTTTTGCAGGGCACGAAA Barbarea_vulgaris ATGCGAATTCTTGCTGCTCGCGTAGCTAACCATTTTTGCAGAGGAAGAAA Brassica_rapa ---------------------------------------AGAGGGAGAAA Aethionema_subulatum ATGCGGATTCTTGCTGCTCGGTTCGCTAATCATTTTTGCAGGGGAAGAAG Iberis_gibraltarica ATGCGGATTCTTGCTGCTCGCCTGACTAATCATTTTTGCAGAACGAGAAA Physaria_newberryi ATGAGGTTTCTTGCTGCTCGCCTAGCTAACCATTTTTGCAGAACAAGAAA Boechera_canadensis ATGCGGATTCTTGCTGCTCGCCTAGCTAACCATTTTTGCGGCACAAGAAA Turritis_glabra ATGCGGATTCTTGCTGCTCGCCTAGCTAACCATTTTTGCAGAATACGAAA Cleome_serrulata ATGCGGATACTGGCTGCTCGTGTAGCCGACTACTGTTGCAGAGGCAGATA Sisymbrium_officinale ATGCGCATTCTTGCTGCTCGCGTAGCTAACCATTTTTGCAGAGGAAGAAA Rorippa_sylvestris -------------------------------------------------- Erysimum_cheiri ATGCGGATTCTTGCTGCTCGCCTAGCTAACCATTTTTGCAGAGGAAGAAA Aethionema_grandiflorum ATGCGGATTCTTGCTGCTCGATTCTCTAATCATTTTTGCAGAGGAAGAAG Camelina_sativa -------------------------------------------------- Cardamine_pensylvanica ATGCGACTTCTTGCTGCTCGCCTAACTAACCATTTTTGCAGAGGAAGAAA Chorispora_bungeana ATGCGGACTCTTGCTGCTCGATTAGCTAACCATTTTTGCAGAGGAAGAAA Capsella_rubella ATGCGGATTCTTGCTGCTCGCCTAGCCAACCATTTTTGCAGAGGAAGAAA Catolobus_pendulus ATGCGGATTCTTGCGGCTCGCCTAGCTAACTATTTTTGCAGAGGAAGAAA Hesperis_matronalis ATGCGGATTCTTGCTGCTCGAGTAGCTAACCATTTTTGCAGAGGAAGAAA Coincya_monensis ATGCGAATCTTTGCTGCTCGCCTCGCTAACCATTTTCGCAGAGGGAGAAA Erysimum_cheiranthoides -------------------------------------------------- Brassica_nigra ATGCGAATCTTTGCTGCTCGCCTCGCTAACCATTTTCGCAGAGGGAGAAA Rorippa_globosa ATGCGAATTCTTGCTGCTCGCATAGCTAACCATTTTTGCAGAGGAAGAAA Berteroa_incana ATGCGAATTCTTGCTGCTCGCTTCGCTAATCATTTGTGCAGAGGAAGAAA Cakile_maritima ATGCGAATCCTTGCTGCTCGCCTCGCTAACCATTTTCGCAGAGGAAGAAA Lobularia_maritima ATGCGAATTCTCGTTTCACGTTTAGCTAACCATTTTTGTAGAGGAGGAAG Hirschfeldia_incana ATGCGAATCTTTGCTGCTCGCCTCGCTAACCATTTTCGCAGAGGAGCAAA Raphanus_raphanistrum ATGCGAATCTTTGCTGCTCGCCTCGCTAATCATTTTCGCAGAGGGAGAAA Iberis_sempervirens ATGCGTATTCTTGCTGCTCGCCTGACTAATCATTTTTGCAGAACGAGAAA Lepidium_campestre ATGCGGACTCTTGCAGCTCGCATAGCAAACCATTTTTGCAGAACAAGAAA Lunaria_annua ATGCGGATTCTTGCTGCTCGCCTGGCTAACCATTTTTGCAGAGTAAGAGA Parrya_nudicaulis -------------------------------------------------- Lepidium_didymum ATGCGGATTCTTGCCGCTCGCATAGCAAACCATTTTTGCAGAACAAGAAA Eutrema_salsugineum ATGCGAATTCTTGCTGCTCGTGTAGCTAGCCATTTTTGCAGAGGAAGAAA Thlaspi_arvense ATGCGAATTCTCGCTGCTCGCGTAGCTAACCATTTTTGCAGAGGAAGGGA Schrenkiella_parvula -------------------------------------------------- Smelowskia_tibetica ATGCGGATTCTTGCTGCTCGTCTAGCAAACCATTTTTGCAGGGCAAGAAA Thlaspi_alliaceum ATGCGAATTCTCGCTGCTCGCGTAGCTAACCATTTTCGCAGAGGAAAGGT Alliaria_petiolata TGCGTATCCTCGATCTCGTAATTTCTCCTCGTTGACAAAAAAAGATGACC Arabidopsis_lyrata CGCGTATCCTCGATCTCGAAATTTCTCCTCGTTGAACAAGAAAGATGACC Alyssum_alyssoides TGGGTCTCCTCAATCTCGAAATTTCTTTACGCTGAACAAGAAAGATGATC Arabidopsis_thaliana CGCGAATCCTCGATCTCGAAATTTCTCCTCGTCGAACAAGAAAGATGACC Barbarea_vulgaris CTCGTGTCCTCAATCTCGGAATTTCTCCTCGTTCAGCAAAAAAGATGATC Brassica_rapa TGGGTATCCTCGATCTCGGGACTTCTCCTCGTTGACCAAGAAAGAGGACC Aethionema_subulatum TCCGTATCTTCGATCTCGAAACTACTCCTCGTTGAAACAGAAAGATGATC Iberis_gibraltarica TGCGTATCCTCGATCTCGAAATTTCTCCACACTGAGCAAGAAAGATGACC Physaria_newberryi TGTGAATCATCGATCTGGATATTTCTCCTCGTTTAACCAGAAAGATGACC Boechera_canadensis TGCGAATCCTCGATCTCGAACATATTCCTCGTTGAACAAGAAAGATGACC Turritis_glabra CTCGAATCCTCGATCTCGAAATTTCTCCTCGTTGAACAAGAAAGATGACC Cleome_serrulata TGGACATCTTCGATCTCGAAATATTTCGTCTGTGAGTAAAAAAGACGATC Sisymbrium_officinale TGTGTATCCTCGATCTCGAAATTTCTCCTCCTTGACCAAGAAAGATGACC Rorippa_sylvestris -------------------------------------------------- Erysimum_cheiri CGCGTATCCTCGATCTCGAAATTACTCCTCCTTGAACAAGAAAGATGACC Aethionema_grandiflorum TCCGTATCTTCGATCTCGAAACTACTCCTCGTTGAAACAGAAAGATGATC Camelina_sativa -------------------------------------------------- Cardamine_pensylvanica CTCGTATCCTCGTTCTCGTAATTTCTCCTCGTCCAACAAGAAAGATGATC Chorispora_bungeana TGCATATCCTCGATCTCGTAATTTCTCCTCGTTGAACAAGACAGATGGCT Capsella_rubella CGCGTATCCTCGATCTCGGAATTATTCGTCGTTGAACAAGAAAGATGACC Catolobus_pendulus CGCGTATCCTCGATCTCGGAATTATTCCTCGTTGAACAAGAAAGATGACC Hesperis_matronalis TACGAATCCTCGATCTCGGAATTTCTTCTCGTTGAACAAGAAAGATGACC Coincya_monensis TGGGCATCCTCGATCTCGGACCTTCTCCTCGTTGACCAAGAAAGATGACC Erysimum_cheiranthoides -------------------------------------------------- Brassica_nigra TGGGTATCCTCAATCTCGGAACTTCTCCTCGTTGACCAAGAAAGATGACC Rorippa_globosa CTCGTGTCCTCGATCTCGAAATTTCTCCTCGTTCAGCAAAAAAGATGATC Berteroa_incana TGTGTATCCTCGATCTCGAAATTTCTTCACGCTCAACAGGAAAGATGATC Cakile_maritima TGGGTATCCTCCATCTCGGAACTTCTCCTCGTTGACCAAGAAAGAGGACC Lobularia_maritima AAATGTTCCTCCATCTCGAAATGTCTCATCCTTTAGCAACAAAGAGGAAC Hirschfeldia_incana TGGGTGTCCTCGATCTCGAAACTTCTCATCGTTGACCAAGAAAGATGACC Raphanus_raphanistrum TGGGTATCCTCCATCTCGAAACTTCTCCTCGTTGACCAAGAAAGATGACC Iberis_sempervirens TGCGTATCCTCGATCTCGAAATTTTTCCACACTGAGCAAGAAAGATGACC Lepidium_campestre CGCATATCCTCGATCTCGAAATTTCTCCTCGTTGAACAAAAAAGATGATC Lunaria_annua TGCGTATCCTCGATCTCGGAATCTCTCCTCGTTGAGCAAGAAAGATGACC Parrya_nudicaulis -GCGTATCCTCGATCTCGCAATTTCTCGTCGTTGAACAAGACAGAGGACC Lepidium_didymum CGCGTGTCCTCGATCTCGGAATTTCTCCTCGTTGAACAAAAAAGATGATC Eutrema_salsugineum TGCAAATCCTCGATCGCAGAATTTCTCCTCGCTGACCAAAAAAGATGACC Thlaspi_arvense TGCGTATCCTCGATCTCGTAATTTCTCATCGTTGACAAAAAAAGATGATC Schrenkiella_parvula ----------------------------------------------GACC Smelowskia_tibetica CGCCTGTCCTCGATCTCGGAATTTCTCCTCGTTGAACAAGAAAGATGACC Thlaspi_alliaceum TGCGTATCCTCGATCTCGTAATTTCTCCTCGTTGACAAAAAAAGATGACC Alliaria_petiolata TTACATTGGAGGAAGAAGCTGAGAGGAAGATAGGCTGGTTGCTGAAGCTT Arabidopsis_lyrata TTACATTGGAGGAAGAAGCTGAGAGGAAAATAGGCTGGTGTCTCAAAATT Alyssum_alyssoides TTACATTGGAGGAAGAAGCTGAGAGGAAAATAGGATGGTTGCTGAAAATT Arabidopsis_thaliana TTACATTGGAGGAAGAAGCTGAGAGGAAAATAGGTTGGTGTCTCAAAATT Barbarea_vulgaris TTACATTGGAGGAAGAAGCTGAGAGGAAAATTGGCTGGGCTCTGAAAATT Brassica_rapa TTACATTGGAGGAAGAAGCTGAGAGGAAGATAGGATGGATGCTGAAGCTT Aethionema_subulatum TTACTTTGGAGGAAGAAGCAGAAAGGAAAATAGGCTGGTTGCTTAAACTT Iberis_gibraltarica TTACTATGGAAGAAGAAGCTGAAAGAAAAATAGGTTGGTTACTGAAGATT Physaria_newberryi TTACATTGGAGGAAGAAGCTGAGAGAAAAATAGGCTGGGATCTCAAAATT Boechera_canadensis TTACATTGGAGGAAGAAGCTGAGAGGAAAATAGGCTGGTGTCTCAAAATT Turritis_glabra TTACATTGGAGGAAGAAGCTGAGAGGAAAATAGGCTGGTGTCTCAAAATT Cleome_serrulata TTACCCTGGAAGAGGAAGCAGAGAGGAAAATCGGGTGGCTGCTGAAACTT Sisymbrium_officinale TTACATTGGAGGAAGAAGCTGAGAGGAAAATAGGCTGGATGCTGAAACTT Rorippa_sylvestris -------------------------------------------------- Erysimum_cheiri TTACATTGGAGGAAGAAGCTGAGAGGAAGATAGGCTGGTGTCTTAAAATT Aethionema_grandiflorum TTACTTTGGAGGAAGAAGCAGAAAGGAAAATAGGCTGGTTGCTTAAACTT Camelina_sativa -----------------------------------------CTCAAAATT Cardamine_pensylvanica TTACATTAGAGGAAGAAGCTGAGAGGAAAATAGGTTGGTGTCTCAAAATT Chorispora_bungeana TTACAATGGAGGAAGAAGCTGAGAGGAAAATAGGCTGGTTGCTCAAACTT Capsella_rubella TTACATTGGAGGAAGAAGCTGAGAGGAAAATAGGCTGGTGTCTCAAAATT Catolobus_pendulus TTACATTGGAGGAAGAAGCTGAGAGGAAAATAGGTTGGTGTCTCAAAATT Hesperis_matronalis TTACAATGGAGGAAGAAGCTGAGAGGAAAATAGGCTGGTTGCTCAAACTT Coincya_monensis TTACATTGGAGGAAGAAGCTGAGAGGAAAATAGGATGGATGCTGAAGCTT Erysimum_cheiranthoides -------------------------------------------------- Brassica_nigra TTACATTGGAGGAAGAAGCTGAGAGGAAAATAGGATGGATGCTGAAGCTT Rorippa_globosa TTACATTGGAGGAAGAAGCTGAGAGGAAAATAGGCTGGGCTCTCAAAATT Berteroa_incana TTACATTGGAGGAAGAGGCTGAGAGGAAAATAGGTTGGATGCTGAAGATC Cakile_maritima TTACATTGGAGGAGGAAGCTGAGAGGAAAATAGGCTGGATGCTGAAGCTT Lobularia_maritima TTACAATGGAGGAAGAAGCTGAGAGGAAAATAGGTTGGTTGCTCAAGATT Hirschfeldia_incana TTACATTGGAGGAAGAAGCTGAGAGGAAAATAGGATGGATGCTGAAGCTT Raphanus_raphanistrum TAACATTGGAGGAAGAAGCTGAGAGGAAAATAGGATGGATGCTGAAGCTT Iberis_sempervirens TTACTATGGAGGAAGAAGCAGAAAGAAAAATAGGCTGGTTACTGAAAATT Lepidium_campestre TTACATTGGAGGAAGAAGCTGAGAGGAAAATAGGCTGGTGTCTTAAACTT Lunaria_annua TTACAATGGAGGAAGAAGCTGAAAGGAAAATAGGCTGGTTGCTGAAAATT Parrya_nudicaulis TTACAATGGAGGAAGAAGCTGAGAGGAAAATAGGCTGGTTGCTGAAACTT Lepidium_didymum TTACATTGGAGGAAGAAGCTGAGAGGAAAATAGGCTGGGGTCTCAAAATT Eutrema_salsugineum TTACATTGGAGGAAGAAGCTGAGAGGAAAATTGGCTGGTTGCTGAAAATT Thlaspi_arvense TTACATTGGAGGAAGAAGCTGAGAGGAAAATAGGCTGGTTGCTGAAACTT Schrenkiella_parvula TTACATTGGAGGAAGAAGCTGAGAGGAAGATAGGCTGGTTGCTGAAACTT Smelowskia_tibetica TTACATTGGAGGAAGAAGCAGAGAGGAAAATAGGCTGGTGTCTCAAAATT Thlaspi_alliaceum TTACATTGGAGGAAGAAGCAGAGAGGAAAATAGGCTGGTTGCTGAAACTT Alliaria_petiolata TTCTTTGCTGGGACAGCAACGTATGTCGGATACCAGTTCTTCCCTTATAT Arabidopsis_lyrata TTCTTTGCTGGGACTGCAACGTATATCGGATACCAGTTTTTCCCGTACTT Alyssum_alyssoides TTCTTTGCTGGGACAGCAACGTTTATCGGATACCAGTTTTTCCCTTACTT Arabidopsis_thaliana TTCTTTGCGGGCACAGCAACGTATATTGGATACCAGTTTTTCCCTTACTT Barbarea_vulgaris TTCTTTGCTGGGACAGCAACGTATATCGGATACCAGTTTTTCCCTTACTT Brassica_rapa TTCTTTGCTGGGACAGCAACCTATGTTGGATACCAGTTCTTCCCTTATAT Aethionema_subulatum TTCTTTGCTGGGACTGCATCGTATATCGGCTACCAGTTCTTCCCTTATAT Iberis_gibraltarica TTCTTTGCTGGAACAGCCACATATATCGGATACCAGTTTTTCCCTTACTT Physaria_newberryi TTCTTTGCTGGGACAGCTACATATATCGGATACCAATTTTTCCCTTACTT Boechera_canadensis TTCTTTGCTGGGACAGCTACGTATATCGGATACCAGTTTTTCCCTTACTT Turritis_glabra TTCTTTGCTGGGACAGCTACGTATATCGGATACCAGTTTTTCCCTTACTT Cleome_serrulata TTCTTTGCTGGGACAGCAACGGCTGTTGGATACCAGTTTTTCCCGTATAT Sisymbrium_officinale TTCTTTGCTGGGACAGCAACGTATATTGGATACCAGTTTTTCCCTTATAT Rorippa_sylvestris ------------------------------------TTTTTCCCTTACTT Erysimum_cheiri TTCTTTGCTGGGACAGCTACGTATATTGGATACCAGTTTTTCCCTTACTT Aethionema_grandiflorum TTCTTTGCTGGGACTGCATCGTATATCGGCTACCAGTTCTTCCCTTATAT Camelina_sativa TTCTTTGCTGGGACTGCTACGTATATTGGATACCAGTTTTTCCCTTACTT Cardamine_pensylvanica TTCTTTGCTGGGACAGCAACGTATATTGGATACCAGTTTTTTCCTTACTT Chorispora_bungeana TTCTTCGCTGGGACAGCATCGTATGTCGGATACCAGTTTTTCCCTTACAT Capsella_rubella TTCTTTGCTGGGACAGCTACGTATATCGGATACCAGTTTTTCCCTTACTT Catolobus_pendulus TTCTTTGCTGGGACAGCTACATATATCGGATACCAGTTTTTCCCTTACTT Hesperis_matronalis TTCTTTGCTGGGACAGCATCGTATGTCGGATACCAGTTTTTCCCTTACAT Coincya_monensis TTCTTTGCTGGGACAGCAACGTATGTTGGATACCAGTTCTTCCCTTATAT Erysimum_cheiranthoides -------------------------------------------------- Brassica_nigra TTCTTTGCTGGGACAGCAACTTATGTTGGATACCAGTTCTTCCCTTACAT Rorippa_globosa TTCTTTGCTGGGACTGCAACGTATATCGGATACCAGTTTTTCCCTTACTT Berteroa_incana TTCTTTGCTGGGACAGCAACGTTTATCGGATACCAGTTTTTCCCTTACTT Cakile_maritima TTCTTTGCTGGGACAGCAACGTATGTTGGATACCAGTTCTTCCCTTATAT Lobularia_maritima TTCTTCGCTGGAACGGCTACCTATATCGGTTACCAGTTTTTTCCTTACTT Hirschfeldia_incana TTCTTTGCTGGGACAGCATCATATGTTGGATACCAGTTCTTCCCTTATAT Raphanus_raphanistrum TTCTTTGCTGGGACAGCTACCTATGTTGGATACCAGTTCTTCCCTTATAT Iberis_sempervirens TTCTTTGCTGGAACAGCCACATATATTGGATACCAGTTTTTCCCTTACTT Lepidium_campestre TTCTTTGCTGGGACAGCAACGTATATCGGATATCAGTTTTTTCCTTACTT Lunaria_annua TTCTTTGCTGGGACTGCAACGTATATTGGATACCAGTTTTTCCCTTACTT Parrya_nudicaulis TTCTTTGCTGGGACAGCATCGTATGTCGGATACCATTTTTTCCCTTACAT Lepidium_didymum TTCTTTGCTGGGACTGCAACGTATATCGGATACCAGTTTTTTCCTTACTT Eutrema_salsugineum TTCTTTGCTGGGACAGCAACGTATGTCGGATACCAGTTCTTCCCTTATAT Thlaspi_arvense TTCTTTGCTGGGACAGCAACGTATGTCGGATACCAGTTCTTCCCTTATAT Schrenkiella_parvula TTCTTTGCTGGGACTGCGACGTATGTAGGATACCAGTTTTTCCCGTATAT Smelowskia_tibetica TTCTTTGCTGGGACTGCAACGTATATCGGATACCAGTTTTTCCCTTACTT Thlaspi_alliaceum TTCTTTGCTGGGACAGCATCTTATGTCGGATACCAGTTCTTCCCTTATAT Alliaria_petiolata GGGTGATACTTTAATTCAGCAATCAGTCTCGCTTTTGCATGTGAAGGATC Arabidopsis_lyrata AGGTGATAACTTGATTCATCAATCAATATCGCTTTTACATGTCAAGGATC Alyssum_alyssoides GGGTGATAACTTGATTCAGCAATCGATCTCACTTTTACATGTGAAGGATC Arabidopsis_thaliana AGGTGATAACTTAATTCATCAATCAATATCGCTTTTACATGTGAAGGATC Barbarea_vulgaris GGGTGATAACTTGATTCAGCAATCAATATCGCTTTTACATGTGAAGGATC Brassica_rapa GGGTGATACTTTAATTCAGCAATCAGTCTCGCTTTTACATGTGAAGGATC Aethionema_subulatum GGGTGATAATCTAATTCAGCAATCAATATCTCTTTTACATGTCAAGGATC Iberis_gibraltarica AGGTGATAACTTGATTCAACAATCAATATCGCTTTTACATGTGAAGGATC Physaria_newberryi AGGTGATAACTTGATTCACCAATCAATATCGCTTTTACATGTTAAGGATC Boechera_canadensis GGGTGATAACTTGATTCACCAATCAATATCGCTTTTACATGTGAAGGATC Turritis_glabra GGGTGATAACTTGATTCAGCAATCAATATCGCTTTTACATGTGAAGGATC Cleome_serrulata GGGGGATACTTTGCTTCAGCAATCAATATCGCTTTTGCATGTCAAGGATC Sisymbrium_officinale GGGTGATACTTTGATTCAGCAATCAGTCTCGCTTTTACATGTCAAGGATC Rorippa_sylvestris GGGTGATAACTTGATTCAGCAATCAATATCGCTTTTACATGTGAAGGATC Erysimum_cheiri GGGTGATAACTTGATTCAGCAATCCATATCGCTTTTACATGTGAAGGATC Aethionema_grandiflorum GGGTGATAATCTAATTCAGCAATCAATATCTCTTTTACATGTCAAGGATC Camelina_sativa GGGTGATAACTTGATTCAGCAATCCATATCGCTTTTACATGTGAAGGATC Cardamine_pensylvanica GGGTGATAACTTGATTCATCAATCAGTATCGCTTTTACATGTCAAGGATC Chorispora_bungeana GGGTGATACTTTAATTCAGCAATCAGTCTCGCTTTTACATGTGAAGGATC Capsella_rubella GGGTGATAACTTGATTCAGCAATCAATATCGCTTTTACATGTTAAGGATC Catolobus_pendulus GGGTGATAACTTGATTCAGCAATCAATATCGCTTTTACATGTGAAGGATC Hesperis_matronalis GGGTGATACTTTAATTCAGCAATCAGTCTCGCTTTTACATGTGAAGGATC Coincya_monensis GGGTGATACATTAATTCAGCAATCAGTCTCGCTTTTACATGTGAAGGATC Erysimum_cheiranthoides -------------------------------------------------- Brassica_nigra GGGTGATACTTTGATTCAGCAATCAGTCTCGCTTCTACATGTGAAGGATC Rorippa_globosa GGGTGATAACTTGATTCAGCAATCAATATCGCTTTTACATGTGAAGGATC Berteroa_incana GGGTGATAACTTGATTCAGCAATCGATCTCGCTTTTACATGTGAAGGATC Cakile_maritima GGGTGATACTTTAATTCAGCAATCAGTCTCGCTTTTACATGTGAAGGATC Lobularia_maritima GGGTGATAACTTGATTCAACAATCTGTATCGCTTTTACATGTGAAGGATC Hirschfeldia_incana GGGTGATACTTTGATTCAGCAATCAGTCTCGCTTTTACATGTGAAGGATC Raphanus_raphanistrum GGGTGATACTTTGATTCAGCAATCAGTCTCGCTTTTACATGTGAAGGATC Iberis_sempervirens GGGTGATAACTTGATTCAACAATCAATATCGCTTTTACATGTGAAGGATC Lepidium_campestre GGGTGATAACTTGATTCAGCAATCAATATCGCTTTTACATGTGAAGGATC Lunaria_annua GGGTGATAACTTGATTCAGCAATCAATATCGCTTTTACATGTGAAGGATC Parrya_nudicaulis GGGTGATACTTTACTTCAGCAATCAGTCTCGCTTTTACATGTGAAGGATC Lepidium_didymum GGGTGATAACTTGATTCAGCAATCAATATCGCTTTTACATGTGAAGGATC Eutrema_salsugineum GGGTGATACTTTAATTCAGCAATCAGTCTCGCTTTTACATGTGAAGGATC Thlaspi_arvense GGGTGATACGTTAATTCAGCAATCAGTCTCGCTTTTACATGTGAAGGATC Schrenkiella_parvula GGGTGATACTTTAATTCAGCAATCGGTCTCCCTTTTACATGTGAAGGATC Smelowskia_tibetica GGGTGATAACTTGATTCACCAATCGATATCGCTTTTACATGTGAAGGACC Thlaspi_alliaceum GGGTGATACTTTAATTCAGCAATCAGTCTCGCTTTTGCATGTGAAGGATC Alliaria_petiolata CCTTGTTTAAGAGGATTGGAGCTTCAAGGCTTTCCCGTTTCGCCATTGAT Arabidopsis_lyrata CTTTGTTTAAGAGAATGGGAGCTTCTAGGCTTTCCCGTTTCGCTATTGAT Alyssum_alyssoides CCTTGTTTAAGAGAATGGGAGCTTCTAGGCTTTCCCGTTTCGCCATTGAT Arabidopsis_thaliana CTTTGTTTAAGAGAATGGGAGCTTCTCGGCTTTCCCGTTTCGCTATTGAT Barbarea_vulgaris CCTTGTTTAAGAGAATGGGAGCTTCTAGGCTTTCCCGTTTCGCCATTGAT Brassica_rapa CCTTGTTTAAGAGGATAGGAGCTTCTAGGCTTTCGCGTTTAGCCATTGAT Aethionema_subulatum CCTTGTTTAAAAGAATGGGAGCTTCTAGGCTTTCCCGTTTCGCCATTGAT Iberis_gibraltarica CTTTGTTTAAGAGAATGGGAGCTTCTAGGCTTTCCCGTTTCGCTATTGAT Physaria_newberryi CTTTGTTTAAGAGAATGGGTGCTTCTAGGCTTTCCCGTTTCGCCATTGAT Boechera_canadensis CTTTGTTTAAGAGAATGGGTGCTTCTAGGCTTTCCCGTTTCGCCATTGAT Turritis_glabra CCTTGTTTAAGAGAATGGGAGCTTCTAGGCTTTCCCGTTTCGCCATTGAT Cleome_serrulata CATTGTTTAAACGAATGGGAGCTTCTAGGCTTTCACGTTTTGCTGTTGAT Sisymbrium_officinale CCTTGTTTAAGAGAATAGGAGCTTCTAGGCTTTCCCGTTTCGCCATTGAT Rorippa_sylvestris CTTTGTTTAAGAGAATGGGAGCTTCTCGGCTTTCCCGTTTCGCCATTGAT Erysimum_cheiri CATTGTTTAAGAGAATGGGAGCTTCTAGGCTTTCCCGTTTCGCCATTGAT Aethionema_grandiflorum CCTTGTTTAAAAGAATGGGAGCTTCTAGGCTTTCCCGTTTCGCCATTGAT Camelina_sativa CCTTGTTTAAGAGAATGGGAGCTTCTAGGCTTTCCCGTTTTGCCATTGAT Cardamine_pensylvanica CTTTGTTTAAGAGAATGGGAGCTTCTAGGCTTTCCCGTTTCGCCATTGAT Chorispora_bungeana CTTTGTTTAAGAGAATTGGAGCTTCTAGGCTTTCCAGTTTTGCCGTTGAC Capsella_rubella CCTTGTTTAAGAGAATGGGAGCTTCAAGGCTTTCCCGTTTCGCCATTGAT Catolobus_pendulus CCTTGTTTAAGAGAATGGGAGCTTCTAGGCTTTCCCGTTTCGCCATTGAT Hesperis_matronalis CATTGTTTAAGAGAATGGGAGCTTCTAGGCTTTCCCGTTTCGCCATTGAT Coincya_monensis CCTTGTTTAAGAGAATAGGAGCTTCTAGGCTTTCTCGTTTCGCCATCGAT Erysimum_cheiranthoides --------------ATGGGAGCTTCTAGGCTTTCCCGTTTCGCCATTGAT Brassica_nigra CCTTGTTTAAGAGAATAGGAGCTTCTAGGCTTTCCCGTTTCGCCATTGAT Rorippa_globosa CTTTGTTTAAGAGAATGGGAGCTTCTAGGCTTTCCCGTTTTGCCATTGAT Berteroa_incana CGTTGTTTAAGAGAATGGGAGCTTCTAGGCTTTCCCGTTTCGCAATTGAT Cakile_maritima CCTTGTTTAAGAGAATAGGAGCTTCTAGGCTTTCCCGTTTCGCCATTGAT Lobularia_maritima CTTTGTTTAAAAGAATGGGTGCTTCTAGGCTCTCCCGTTTCGCCATTGAC Hirschfeldia_incana CCTTGTTTAAGAGAATAGGAGCTTCTAGGCTTTCCCGTTTCGCCATTGAT Raphanus_raphanistrum CCTTGTTTAAGAGAATAGGTGCTTCTAGACTTTCCCGTTTCGCCATTGAT Iberis_sempervirens CTTTGTTTAAGAGAATGGGAGCTTCTAGGCTCTCTCGTTTCGCCATTGAT Lepidium_campestre CCTTGTTTAAGAGAATGGGAGCTTCTAGGCTTTCCCGTTTTGCCATTGAT Lunaria_annua CCTTGTTTAAGAGAATGGGAGCTTCTAGGCTTTCCCGTTTCGCCATTGAT Parrya_nudicaulis CCTTGTTTAAGCGAATA--------------------------------- Lepidium_didymum CCTTGTTTAAGAGAATGGGAGCTTCTAGGCTTTCCCGTTTCGCCATTGAT Eutrema_salsugineum CCTTGTTTAAGAGAATAGGAGCTTCTAGGCTTTCCCGTTTCGCCATTGAT Thlaspi_arvense CCTTGTTTAAGAGAATTGGAGCTTCTAGGCTTTCCCGTTTCGCCATTGAT Schrenkiella_parvula CCTTGTTTAAGAGAATAGGAGCTTCTAGGCTTTCCCGTTTCGCCATTGAT Smelowskia_tibetica CCTTGTTTAAGAGAATGGGAGCTTCTAGGCTTTCTCGTTTCGCCATTGAT Thlaspi_alliaceum CCTTGTTTAAGAGAATTGGAGCTTCAAGGCTTTCCCGTTTCGCCATTGAT Alliaria_petiolata GATGAAAGGAGAATGAAGGTTGTAGAGTTGGGTGGGGCTCAAGAGCTTCT Arabidopsis_lyrata GATGAAAGGAGGATGAAGGTTGTGGAGATGGGTGGGGCTCAAGAGCTTCT Alyssum_alyssoides GATGAAAGGAGAATGAAGGTTGTAGAGATGGGTGGAGCTAAGGAGCTTTT Arabidopsis_thaliana GATGAAAGGAGGATGAAGGTTGTAGAGATGGGTGGGGCTCAAGAGCTACT Barbarea_vulgaris GATGAAAGGAGAATGAAGGTTGTAGAGATGGGTGGGGCTAAAGAGCTTTT Brassica_rapa GATGAAAGGAGGATGAAGGTTGTAGAGTTGGGTGGGGCTCAAGAGCTTCT Aethionema_subulatum GATGAAAGGAGAATGAAGGTTGTAGAGTTAGGTGGAGCTCAAGAACTTCT Iberis_gibraltarica GATGAAAGGAGAATGAAGGTTATAGAGATGGGTGGGGCTCAACAGCTTCT Physaria_newberryi GATGGAAGGAGAATGAAGGTTGTAGAGATGGGTGGGGCTCAAGAGCTTCT Boechera_canadensis GATGAAAGGAGAATGAAGGTTGTAGAGATGGGTGGGGCTCAAGAGCTTCT Turritis_glabra GATGAAAGGAGAATGAAGGTTGTAGAGATGGGTGGGGCTCAAGAGCTTCT Cleome_serrulata GATGCCAGAAGAATGAAGATTATAGAGATGGGTGGGGCTGAAGAGCTTCT Sisymbrium_officinale GATGAAAGGAGAATGAAGGTTGTGGAGTTGGGTGGGGCTCAAGAGCTTCT Rorippa_sylvestris GATGAAAGGAGAATGAAAGTTGTAGAGATGGGTGGGGCTAAAGAGCTTCT Erysimum_cheiri GATGAAAGGAGAATGAAGGTTGTAGAGATGGGTGGGGCTCAAGAGCTTCT Aethionema_grandiflorum GATGAAAGGAGAATGAAGGTTGTGGAGTTAGGTGGAGCTCAAGAGCTTCT Camelina_sativa GATGAAAGGAGAATGAAGGTTGTAGAGATGGGTGGGGCTCAAGAGCTTCT Cardamine_pensylvanica GATGAAAGGAGAATGAAGGTTGTAGAGATGGGTGGTGCTAAAGAGCTTCT Chorispora_bungeana GATGAAAGGAGAATGAAAGTTATAGAGTTGGGTGGGGCTCAACAGCTTAT Capsella_rubella GATGAAAAGAGGATGAAGGTTGTAGAGATGGGTGGGGCTCAAGAGCTTCT Catolobus_pendulus GATGAAAGGAGAATGAAGGTTGTAGAGATGGGTGGGGCTCAAGAGCTTCT Hesperis_matronalis GATGAAAGGAGAATGAAGGTTGTAGAGTTGGGTGGGGCTAAAGAGCTTAT Coincya_monensis GATGAGAGGAGGATGAAGGTTGTAGAGTTGGGTGGGGCTCAAGAGCTTCT Erysimum_cheiranthoides GATGAAAGGAGAATGAAGGTTGTAGAGATGGGTGGGGCTCAAGAGCTTCT Brassica_nigra GATGAGAGGAGGATGAAGGTTGTAGAGTTGGGTGGGGCTCAAGAGCTTCT Rorippa_globosa GATGAAAGGAGAATGAAAGTTGTAGAGATGGGTGGGGCTAAAGAGCTTCT Berteroa_incana GATGAAAGGAGAATGAAGGTTGTAGAGATGGGTGGAGCTAAGGAGCTTAT Cakile_maritima GATGAAAGAAGGATGAAGGTTGTAGAGCTGGGTGGTGCGCAAGAGCTTCT Lobularia_maritima GACGAAAGGCGAATGAAGGTTGTAGAGATGGGTGGTGCGCAAGAGCTTCT Hirschfeldia_incana GATGAGAGGAGGATGAAGGTTGTGGAGTTGGGTGGAGCTCAAGAGCTTCT Raphanus_raphanistrum GATGAGAGGAGGATGAAGGTTGTAGAGTTGGGTGGGGCTCAAGAGCTTCT Iberis_sempervirens GATGAAAGGAGAATGAAGGTTGTAGAGATGGGTGGAGCTCAAGAGCTTCT Lepidium_campestre GATGAAAGGAGAATGAAGGTTGTAGAAATGGGTGGGGCTCAAGAACTTCT Lunaria_annua GATGAAAGGAGAATGAAGGTTGTAGAGATGGGTGGGGCTCAAGAGCTTCT Parrya_nudicaulis -------------------------------------------------- Lepidium_didymum GATGAAAGGAGAATGAAGGTTGTAGAAATGGGTGGGGCTCAAGAGCTTCT Eutrema_salsugineum GATGAAAGGAGAATGAAGGTTGTAGAGTTGGGTGGGGCTCAAGAGCTTCT Thlaspi_arvense GATGAAAGGAGAATGAAGGTTGTGGAATTGGGTGGGGCTCAAGAGCTTCT Schrenkiella_parvula GAT----------------------------------------------- Smelowskia_tibetica GATGAAAGGAGAATGAAGGTTGTAGAGATGGGTGGGGCTCAAGAGCTTCT Thlaspi_alliaceum GATGAAAGGAGAATGAAGGTTGTAGAGTTGGGTGGGGTTCAAGAGCTTCT Alliaria_petiolata ACATATGTTGGGTGCTGCGAAAGATGACAAGACAAGGAAAGAAGCTCTAA Arabidopsis_lyrata ACTTATGCTGGGAAGTGCTAAAGATGACAAGACAAGGAAAGAAGCTCTAA Alyssum_alyssoides ACATATGTTGGGGACTGCTAAAGATGACAAGACAAGGAAAGAAGCTCTAA Arabidopsis_thaliana ACATATGTTGGGAAGTGCTAAAGATGACAAGACAAGGAAAGAAGCCCTAA Barbarea_vulgaris ACAGATGTTGGAGACTGCTAAAGATGACAAGACTAGGAAAGAAGCTCTGA Brassica_rapa TCATATGCTGGGCGCTGCTAAAGATGACAAGACAAGGAAAGAAGCTCTAA Aethionema_subulatum ACATATGTTGGGGACTGCTAAAGATGATAAGACGAGGCGAGAAGCTCTAA Iberis_gibraltarica ACATATGTTAGAAACTGCTAAAGATGATAAGACAAGGAAAGAAGCTCTTA Physaria_newberryi AAATATGTTGGGAAATGCTAAAGATGACAAGACAAGAAAAGAAGCTCTCA Boechera_canadensis ACATATGTTGGGAAATGCTAAAGATGACAAGACAAGGAAAGAAGCTCTCA Turritis_glabra ACATATGTTGGGGACTGCTAAAGATGACAAGACAAGGAAAGAAGCTCTCA Cleome_serrulata AAGTATGTTGGTGATGGCTAAGGATGACAAGACTAGGAAAGAAGCTCTAA Sisymbrium_officinale ACATATGTTAGGCGCTGCTAAAGATGACAAGACAAGGAAAGAAGCTCTAA Rorippa_sylvestris GCAGATGTTGGGGACTGCTAAAGATGACAAGACTAGGAAAGAAGCTCTAA Erysimum_cheiri ACATATGTTGGGAACTGCTAAAGATGACAAGACAAGGAAAGAAGCTCTCA Aethionema_grandiflorum ACATATGTTGGGGACTGCTAAAGATGATAAGACGAGGCGAGAAGCTCTAA Camelina_sativa ACATATGTTGGGAAGTGCTAAAGATGACAAGACAAGGAAAGAAGCTCTCA Cardamine_pensylvanica ACAGATGTTAGGGACTGCTAAAGATGACAAGACTAGGAAAGAAGCTTTAA Chorispora_bungeana ACATATGTTGGGGACTGCAAAAGATGACAAGACTAGGAAAGAAGCTCTAA Capsella_rubella ACATATGTTGGGAGGTGCTAAAGATGACAAGACAAGGAAAGAAGCTCTCA Catolobus_pendulus ACATATGTTGGGAAGTGCTAAAGATGACAAGACAAGGAAAGAAGCTCTTA Hesperis_matronalis ACAAATGTTGGGGACTGCTAAAGATGACAAGACAAGGAAAGAAGCTCTAA Coincya_monensis ACATATGTTGGGTGCTGCTAAAGATGACAAGACAAGGAAAGAAGCTCTAA Erysimum_cheiranthoides ACATATGTTGGGAACTGCTAAAGATGACAAGACAAGGAAAGAAGCTCTCA Brassica_nigra TCATATGCTGGGCGCTGCTAAAGATGACAAGACAAGGAAAGAAGCTCTAA Rorippa_globosa GCAGATGTTGGGGACTGCTAAAGATGACAAGACTAGGAAAGAAGCTCTAA Berteroa_incana AAATATGTTGGGGACTGCTAAAGATGACAAGACAAGGAAAGAAGCTCTAA Cakile_maritima TCATATGTTGGGTGCTGCTAAAGATGACAAGACAAGGAAAGAAGCTCTGA Lobularia_maritima ACATATGTTGGAGAGTGCTAAAGATGACAAGACGCGGAAAGAAGCTCTTA Hirschfeldia_incana TCACATGCTGGGCGCTGCAAAAGATGACAAGACAAGGAAAGAAGCTCTAA Raphanus_raphanistrum TCACATGCTGGGCGCTGCTAAAGATGACAAGACAAGGAAAGAAGCTCTAA Iberis_sempervirens ACATATGTTAGGAACTGCTAAAGATGATAAGACAAGGAAAGAAGCTCTCA Lepidium_campestre ACATATGTTGGGAACTGCTAAAGATGACAAGACGAGGAAAGAAGCTCTAA Lunaria_annua ACATATGTTGGGGACCGCTAAAGATGACAAGACAAGGAAAGAAGCTCTAA Parrya_nudicaulis -------------------------------------------GCTCTAA Lepidium_didymum ACATATGTTGGGAACTGCTAAAGATGACAAGACAAGAAAAGAAGCTCTAA Eutrema_salsugineum ACATATGTTGAGGGCTGCTAAAGATGACAAGACAAGGAAAGAAGCTCTAA Thlaspi_arvense ACATATGTTGGGTGCTGCTAAAGATGACAAGACAAGGAAAGAAGCTCTAA Schrenkiella_parvula -------------------------------------------------- Smelowskia_tibetica ACAAATGTTGGGAACTGCTAAAGATGACAAGACAAGGAAAGAAGCTTTAA Thlaspi_alliaceum ACATATGTTGGGTGCTGCTAAAGATGACAAGACAAGGAAAGAAGCTCTAA Alliaria_petiolata AGGCTCTCGCTGCTCTCTCTAAATCAGATGAAGCTGCCAACTTCCTGGGA Arabidopsis_lyrata AGGCTCTTGCTGCTCTCTCTAAATCAGGCGAAGCTGCCAACTTCCTAGGC Alyssum_alyssoides AGGCTCTTGCTGCTCTCTCTAAATCAGATGAAGCTGCCAACTTCCTAGGT Arabidopsis_thaliana AGGCTCTTGCTGCTCTCTCTAAATCAGTTGAAGCTGCTAAATTCCTAGGC Barbarea_vulgaris AGGCTCTCGCTGCTCTCTCTAAATCAGATGAAGCTGCCAACTTCCTGGGA Brassica_rapa AAGCTCTTGCTGCTCTCTCTAAATCAGGCGAAGCTGCCAACTTCCTGGGA Aethionema_subulatum AAGCTCTTGCTGCTCTTTCAAAATCAGATGAAGCTGCTAACTTTCTAGGC Iberis_gibraltarica AGGCTCTTTCTGCGCTTTCTAAATCAGATGAAGCTGCCAGCTTCCTAGGC Physaria_newberryi AGGCTCTTGCTGCTCTCTCTAAATCAGATGAAGCTGCCAAGTTCTTGGAC Boechera_canadensis AGGCTCTTGCTGCTCTCTCTAAATCAGATGAAGCTGCCAAGTTCCTGGAC Turritis_glabra AGGCTCTCGCTGCTCTCTCTAAATCAGATGAAGCTGCCAAGTTCCTGGAC Cleome_serrulata AAACCCTTGCCGCCATCTCAAAATCAGATGAAGCTGCGAGCTTTCTGCGC Sisymbrium_officinale AGGCTATTGCTGCTCTCTCTAAATCAGATGAAGCTGCCAACTTCTTGGGA Rorippa_sylvestris AGGCTCTCGCTGCTCTCTCCAAATCAGATGAAGCTGCCAGCTTCCTGGGA Erysimum_cheiri AGGCTCTCGCTGCTCTCTCTAAATCAGATGAAGCTGCCAACTTCCTAGGC Aethionema_grandiflorum AAGCTCTTGCTGCTCTTTCCAAATCAGATGAAGCTGCTAACTTTCTAGGC Camelina_sativa AGGCGCTTGCTGCTCTCTCTAAATCAGATGAAGCTGCCAAGTTCCTGGAC Cardamine_pensylvanica AGGCTCTCGCTGCTCTCTCGAAATCAGATGAAGCTGCCAACTTCCTGGGA Chorispora_bungeana AGGCTCTCGCTGCTCTCTCTAAATCAGATGAAGCTGCTAACTTCTTGGGC Capsella_rubella AGGCTCTTGCTGCTCTCTCTAAATCAGATGAAGCTGCCAAGTTCCTAGAC Catolobus_pendulus AGGCTCTTGCTGCTCTCTCTAAATCAGATGAAGCTGTCAAGTTCCTAGAC Hesperis_matronalis AGGCTCTCGCTGCTCTCTCTAAATCAGATGAAGCTGCCAACTTCCTGGGT Coincya_monensis AGGCTCTTGCTGCTCTCTCTAAATCAGATGAAGCTGCCAACTTCCTGGGG Erysimum_cheiranthoides AGGCTCTCGCTGCTCTCTCTAAATCAGATGAAGCTGCCAACTTCCTAGGC Brassica_nigra AGGCTCTCGCTGCTCTCTCTAAATCAGATGAAGCTGCCAACTTCCTGGGA Rorippa_globosa AGGCTCTCGCTGCTCTCTCCAAATCAGATGAAGCTGCCAGCTTCCTGGGA Berteroa_incana AGGCTCTTGCTGCTCTCTCTAAATCAGATGAAGCTGCCAACTTCCTGGGC Cakile_maritima AGGCTCTTGCTGCTCTCTCTAAATCAGATGAAGCTGCCAACTTCCTGGGA Lobularia_maritima AGGCTCTTGCTGCTCTCTCTAAATCAGATGAAGCTGTCAACTTCCTAGGC Hirschfeldia_incana AAGCTCTTGCTGCTCTCTCTAAATCAGATGAAGCTGCTAACTTCCTGGGA Raphanus_raphanistrum AAGCTCTTGCCGCTCTCTCTAAATCAGATGAAGCTGCCAACTTCCTGGGA Iberis_sempervirens AGACTCTTGCTGCTCTTTTTAAATCAGATGAAGCTGCCAATTTCCTAGGC Lepidium_campestre AGGCTCTCGCTGCTCTCTCTAAATCAGATGAAGCTGCCAAGTTCCTGGAC Lunaria_annua AAGCTATCGCTGCTCTATCTAATTCAGATGAAGCTGCCAACTTCCTGGAA Parrya_nudicaulis AGGCACTCGCTGCTCTCTCTAAATCAGATGAAGCTGCTAACTTCCTGGGC Lepidium_didymum AGGCTCTTGCTGCTCTCTCTAAATCAGATGAAGCTGCCAAGTTCCTGGAC Eutrema_salsugineum AGGCTCTCGCTGCTCTCTCCAAATCAGATGAAGCTGCCAACTTCCTGGGA Thlaspi_arvense AGGCTCTCGCTGCTCTCTCTAAATCAGATGAAGCTGCCACCTTCTTGGGA Schrenkiella_parvula -----------------------------GAAGCTGCTAACTTCCTGGGA Smelowskia_tibetica AGGCTCTCGCTGCTCTCTCTAAATCAGATGAAGCTGCCAACTTCCTAGGC Thlaspi_alliaceum AGGCTCTCGCTGCTCTCTCTAAATCAGATGAAGCTGCCACCTTCTTGGGA Alliaria_petiolata TCTAATGGAGCACTCTCTATCGTCAAATCGACTCCAGATTCCTTGGAAGA Arabidopsis_lyrata TCTAATGGAGCACTCTCTATCGTCAAATCGACTCCAGATTCCTTGGAAGA Alyssum_alyssoides TCTAACGGAGCACTCTCTATTGTCGAATCGACTCCAGAGTCCGTGGAAGA Arabidopsis_thaliana TCTAATGGAGCACTCTCTATCGTCAAATCGACTCCAAATTCCTTGGAAGA Barbarea_vulgaris TCTAATGGAGCACTCTCTATCGTCAAATCGACTCCAGATTCCTTGGAAGA Brassica_rapa TCTAAAGGAGCACTCTCTATCGTCAAATCCACTCCTGATTCCGCCGAAGA Aethionema_subulatum ACTAATGGAGCATTCTCTATCGTCGAGTCAACTCCAGATTCCTTGGAAGA Iberis_gibraltarica TCTAATGGAGCACTCTCTATCGTCAAATCGACTCCAGATTCCTTGGAAGA Physaria_newberryi TCTAATGGAGCACTGTCTATTGTCAAATCAACTCCAGATTCCTTGGAAGA Boechera_canadensis TCTAATGGAGCACTATCTATTGTCAAATCGACTCCAGATTCCTTGGAAGA Turritis_glabra TCTAATGGAGCACTCTCCATTGTCAAATCGACTCCAGATTCCTTGGAAGA Cleome_serrulata AGCAATGGAGCACTCTCTATCATCAAAGCAACTCCAGATTCCGCAGAAGA Sisymbrium_officinale TCTAACGGAGCACTCTCTATCGTCAAGTCGACTCCAGATTCCTCGGAAGA Rorippa_sylvestris TCTAATGGAGCACTCTCTATCGTCAAATCGACTCCAGATTCCTTGGAAGA Erysimum_cheiri TCTAATGGAGCACTCTCTATCGTCAAATCGACTCCAGATTCCTTGGAAGA Aethionema_grandiflorum ACTAATGGAGCATTCTCTATCGTCGAGTCAACTCCAGATTCCTTGGAAGA Camelina_sativa TCTAATGGAGCACTCTCTATTGTCAAATCGACTCCAGATTCCTTGGAAGA Cardamine_pensylvanica TCTAATGGAGCACTCTCTATCGTCAAATCGACTCCAGATTCCTTGGAAGA Chorispora_bungeana GCTAAAGGAGCACTCTCTATCGTCAAATCAACTCCAGATTCCTTGGAAGA Capsella_rubella TCTAATGGAGCACTTTCTATTGTCAAATCGACTCCAGATTCCTTGGAAGA Catolobus_pendulus TCTAATGGAGCACTCTCTATTGTCAAATCGACTCCAGATTCCTTGGAAGA Hesperis_matronalis GCTAATGGAGCACTCTCTATCGTCAAATCGACTCCAGATTCCTTGGAAGA Coincya_monensis TCTAAAGGAGCACTCTCTATCGTCAAATCGACTCCTGATTCAGCTGAAGA Erysimum_cheiranthoides TCTAATGGAGCACTCTCTATCGTCAAATCGACTCCAGATTCCTTGGAAGA Brassica_nigra TCTAAAGGAGCACTCTCGATCGTCAAATCGACTCCAGATTCCTCGGAAGA Rorippa_globosa TCTAATGGAGCACTCTCTATCGTCAAATCGACTCCGGATTCCTTGGAAGA Berteroa_incana TCTAACGGAGCACTCTCTATTGTCGAATCAACTCCAGATTCCTTGGAAGA Cakile_maritima TCTAAAGGAGCACTCTCTATCGTCAAATCAACTCCTGATTCAGCGGAAGA Lobularia_maritima TCTAATGGAGCATTCTCTATCGTCAAATCGACTCCAGATTCCTTAGAAGA Hirschfeldia_incana TCTAAAGGAGCGCTCTCTATCGTCAAATCAACTCCTGATTCCGCGGAAGA Raphanus_raphanistrum TCTAAAGGAGCACTCTCTATCCTCAAATCGACTCCAGATTCCTCTGAAGA Iberis_sempervirens TCTAGTGAAGCACTCTCTATCGTCAAATCGACTCCAGATTCCTTGGAAGA Lepidium_campestre TCTAATGGAGCACTCTCTATTGTCAAATCGACTCCAGATTCCTTGGAAGA Lunaria_annua TCTAATGGAGCACTCTCTATCGTCAAATCGACCCCAGATTCCTTGGAAGA Parrya_nudicaulis GCTAATGGAGCACTCTCTATCGTCAAATCAACTCCAGATTCCTTGGAAGA Lepidium_didymum ACTAATGGAGCACTCTCTATTGTCAAATCTACTCCAGATTCCTTGGAAGA Eutrema_salsugineum TCTAATGGAGCACTCTCTATCGTCAAATCGACTCCAGATTCCTTGGAAGA Thlaspi_arvense TCTAATGGAGCACTCTCTATCGTCAAATCGACTCCAGATTCCTTGGAAGA Schrenkiella_parvula TCTAATGGAGCACTCTCTATCCTCAACTCGACTCCGGATTCATTGGAAGA Smelowskia_tibetica TCTAACGGAGCACTCTCTATCGTCCAATCGACTCCAGATTCCTTGGAAGA Thlaspi_alliaceum TCTAATGGAGCACTCTCTATCGTCAAATCGACTCCAGATTCCTTGGAAGA Alliaria_petiolata TTCAGACATTTCAACTTTCAAGTCCAACATACTCAACAAGCTAGATGAGA Arabidopsis_lyrata TTCAGACATTTCAACATACAAGTCAAACATACTCGAGAAGCTACATGAGA Alyssum_alyssoides TTTAGACATTTCAACTTACAAGACAAACATACTCAAGAAGCTAGATGTGA Arabidopsis_thaliana TTCAGACATTTCAACATACAAGTCAAACATACTCGAGAAGCTAGTTGAGA Barbarea_vulgaris TTCAGACATTTCAACGTTCAAGTCAAACATACTCAAGAAGTTGGATGAGA Brassica_rapa TTCAGACATTTCAACTTACAAGTCTAACATACTCAAGAAGCTAGATGATA Aethionema_subulatum TTCAGACATTTCAACATACAAGTCAAACATACTCAAGAAGCTAGATGATA Iberis_gibraltarica TTTAGAGATTTCAACATACAAATCGAACATAATGAAGAAGCTAGATGATA Physaria_newberryi TGCAGATATTTCGGCATACAAGTCAAACATACTTAAGAAGCTAGATAAGA Boechera_canadensis TTCAGACATTTCAACATACAAGTCAAACATACTTGAGAAGCTAGATGAGA Turritis_glabra TTCAGACATTTCAACATACAAGTCAAACATACTTGAGAAGCTAGATGAGA Cleome_serrulata TTCAGAAATCACATCTTACAAGTCAAGTCTACTGAAAAAGTTA------- Sisymbrium_officinale TTCAGATATTTCAAAGTACAAGTCAAACATACTCGAGAATCTAGATGATA Rorippa_sylvestris TTCAGACATTTTAACATACAAGTCAAACATACTCAAGAAGCTTGATGAGA Erysimum_cheiri TTCAGACATTTCAACATACAAGTTAAACATACTTGAGAAGCTAGATGAGA Aethionema_grandiflorum TTCAGACATTTCAACATAC------------------------------- Camelina_sativa TTCAGACATTTCAACATACAAGTCAAACATACTTGAGAAGCTAGATGATA Cardamine_pensylvanica TTCAGACATTTCAACATACAAGTCAAACATACTCAACAAGCTGGATGAGA Chorispora_bungeana TTCAGACATTACAACTTACAAGTCAAGCATACTCGAGAAGCTAGATGATA Capsella_rubella TTCAGACATTTCAACATACAAGTCAAACATACTTGAGAAGCTAGATGAGA Catolobus_pendulus TTCAGACATTTCAACATACAAGTCAAACATACTTGAGAAGCTAGATGAGA Hesperis_matronalis TTCAGACATTTCAACATATAAGTCAAACATACTCGAGAAGCTTGATGATA Coincya_monensis TACAGACATTTCAACTTACAAGTCAAACATACTCAAGAAGCTAGATGATA Erysimum_cheiranthoides TTCAGAAATTTCAACATACAAGTCAAACATACTTGGTAAGCTAGATGAGA Brassica_nigra TACAGACATTTCAACTTACAAGTCAAACATACTCAAGAAGCTAGATGATA Rorippa_globosa TTCAGACATTTCAACATACAAGTCAAACATACTCGAGAAGCTTGATGAGA Berteroa_incana TTCGGACATTTCAACTTACAAGTCAAACATACTCAAGAAGCTAGATGAGA Cakile_maritima TTCAGACATTTCAACTTACAAGTCTAACATACTCAAGAAGCTAGATGATA Lobularia_maritima TTCAGAGATTTCAACATACAAATCAAACATACTCAAGAAGCTAGATGATA Hirschfeldia_incana TTCAGACATTTCAACTTACAAGTCTAACATACTCAAGAAGCTAGATGACA Raphanus_raphanistrum TTCAGACATTTCAACTTACAAGTCAAACATACTCAAGAAGCTAGATGATA Iberis_sempervirens TTCAGACATTTCAACATACAACTCGAACATAATCAAGAAGCTA------- Lepidium_campestre TTCAGATATTTCAACATACAAGTCAAACATACTCGAGAAGCTAGAAGAGA Lunaria_annua TTCAGACATTTCAACATACAAGTTAAACATACTCAAGAAGCTAAATGAGA Parrya_nudicaulis TTCAGACATTTCAACATACAAGTCAAACATACTCGAGAAGCTAGATGCTA Lepidium_didymum TTCAGATATTTTAACATACAAGTCAAACATACTTAAGAAGCTGTATGAGA Eutrema_salsugineum TGCAGACATTTCAACATACAAGTCAAACATACTCAAGAAGCTAGATGACA Thlaspi_arvense TTCAGACATTTCAACTTACAAGTCAAACATACTCAACAAGCTAGATGAGA Schrenkiella_parvula TTCAGACATTTCAACTTACAAGTCAAACATACTCAAGAAGCTAGATGATA Smelowskia_tibetica TGCAGACATTTCAACATACAAGTCAAGCATACTCAAGAAGCTAGGTGAGA Thlaspi_alliaceum TTCTGACATTTCAACTTACAAGTCAAACATACTCAACAAGCTAGATGAGA Alliaria_petiolata AAAACCTAGCCGTCTCT Arabidopsis_lyrata AAAACCTCGCCGTCTCC Alyssum_alyssoides AAAGCCTCGCTGTTTCA Arabidopsis_thaliana AAAACCTCGCTGTCTCT Barbarea_vulgaris AAAATATCGCTGTCTCT Brassica_rapa AAGACCTTTCTCTC--- Aethionema_subulatum AAAAGCTTGCAATTGCT Iberis_gibraltarica AAGGCGTTGTGGTAGAA Physaria_newberryi AAAGC------------ Boechera_canadensis AAAACCACGCTGTCTCT Turritis_glabra AAAATCTCACTGTCTCT Cleome_serrulata ----------------- Sisymbrium_officinale AAGACCTCGCTGTTTCT Rorippa_sylvestris AAAATATTGCCGTCTCT Erysimum_cheiri AAAACCTCGCTGTCTCT Aethionema_grandiflorum ----------------- Camelina_sativa AAAACCTCACTGTGTCT Cardamine_pensylvanica AAATTATCTCCATCTCT Chorispora_bungeana AAAAC------------ Capsella_rubella AAAACCTTGCTGTCTCT Catolobus_pendulus AAAACCTCGCTGTCTCT Hesperis_matronalis AAGACCTCGCCGTTTCT Coincya_monensis AAGACCTCGCTGTTTCT Erysimum_cheiranthoides AAAACCTCGCTGTCTCT Brassica_nigra AAGACCTCGCTGTTTCT Rorippa_globosa AAAATATTGCCGTCTCT Berteroa_incana AAAGCCTTGCTGTTTCT Cakile_maritima AAGACCTCGCTGTC--- Lobularia_maritima AAGACCTCTCTGTTTCT Hirschfeldia_incana AAGAC---CCTGTTTCT Raphanus_raphanistrum AAGACCTACCTCTTTCT Iberis_sempervirens ----------------- Lepidium_campestre AAAACCTAGCCATTTCT Lunaria_annua AAAACCTCGTCGTCTCT Parrya_nudicaulis AAAACGTCGTTGTTTCT Lepidium_didymum AAAACCTAACTGTTTCT Eutrema_salsugineum AAGAACTCACCGTTTCT Thlaspi_arvense AAAACCTCGCCGTCTCT Schrenkiella_parvula AAGACCTCGCTGTTTCT Smelowskia_tibetica AAAACCTCGTCGTCTCT Thlaspi_alliaceum AAAACCTCGCCGTCTCT ; END; BEGIN ASSUMPTIONS; TYPESET * UNTITLED = unord: 1 - 567; END; BEGIN CODONS; CODESET * UNTITLED = universal: 1 - 567; END; BEGIN MESQUITECHARMODELS; ProbModelSet * UNTITLED = 'Jukes-Cantor': 1 - 567; END; Begin MESQUITE; MESQUITESCRIPTVERSION 2; TITLE AUTO; tell ProjectCoordinator; timeSaved 1441513126142; getEmployee #mesquite.minimal.ManageTaxa.ManageTaxa; tell It; setID 0 7158114353150942465; endTell; getEmployee #mesquite.charMatrices.ManageCharacters.ManageCharacters; tell It; setID 0 876181322291966488; mqVersion 301; checksumv 0 3 520977714 null getNumChars 567 numChars 567 getNumTaxa 41 numTaxa 41 short true bits 15 states 15 sumSquaresStatesOnly 503997.0 sumSquares 503997.0 longCompressibleToShort false usingShortMatrix true NumFiles 1 NumMatrices 1; mqVersion; endTell; getWindow; tell It; suppress; setResourcesState false false 100; setPopoutState 400; setExplanationSize 0; setAnnotationSize 0; setFontIncAnnot 0; setFontIncExp 0; setSize 700 464; setLocation 8 8; setFont SanSerif; setFontSize 10; getToolPalette; tell It; endTell; desuppress; endTell; getEmployee #mesquite.charMatrices.BasicDataWindowCoord.BasicDataWindowCoord; tell It; showDataWindow #876181322291966488 #mesquite.charMatrices.BasicDataWindowMaker.BasicDataWindowMaker; tell It; getWindow; tell It; setExplanationSize 30; setAnnotationSize 20; setFontIncAnnot 0; setFontIncExp 0; setSize 600 392; setLocation 8 8; setFont SanSerif; setFontSize 10; getToolPalette; tell It; endTell; setActive; setTool mesquite.charMatrices.BasicDataWindowMaker.BasicDataWindow.arrow; colorCells #mesquite.charMatrices.ColorByState.ColorByState; tell It; setStateLimit 9; toggleUniformMaximum on; endTell; colorRowNames #mesquite.charMatrices.TaxonGroupColor.TaxonGroupColor; colorColumnNames #mesquite.charMatrices.CharGroupColor.CharGroupColor; colorText #mesquite.charMatrices.NoColor.NoColor; setBackground White; toggleShowNames on; toggleShowTaxonNames on; toggleTight off; toggleThinRows off; toggleShowChanges off; toggleSeparateLines off; toggleShowStates on; toggleAutoWCharNames off; toggleAutoTaxonNames off; toggleShowDefaultCharNames off; toggleConstrainCW on; toggleBirdsEye off; toggleShowPaleGrid off; toggleShowPaleCellColors off; toggleShowPaleExcluded off; togglePaleInapplicable on; toggleShowBoldCellText off; toggleAllowAutosize off; toggleColorsPanel off; toggleLinkedScrolling on; toggleScrollLinkedTables off; endTell; showWindow; getWindow; tell It; forceAutosize; endTell; getEmployee #mesquite.charMatrices.ColorCells.ColorCells; tell It; setColor Red; removeColor off; endTell; getEmployee #mesquite.categ.StateNamesStrip.StateNamesStrip; tell It; showStrip off; endTell; getEmployee #mesquite.charMatrices.AnnotPanel.AnnotPanel; tell It; togglePanel off; endTell; getEmployee #mesquite.charMatrices.CharReferenceStrip.CharReferenceStrip; tell It; showStrip off; endTell; getEmployee #mesquite.charMatrices.QuickKeySelector.QuickKeySelector; tell It; autotabOff; endTell; getEmployee #mesquite.charMatrices.SelSummaryStrip.SelSummaryStrip; tell It; showStrip off; endTell; getEmployee #mesquite.align.AlignToDropped.AlignToDropped; tell It; gapCosts 8 3 2 2; subCosts 10 5 10 10 10 5 5 10 10 10 5 10; endTell; getEmployee #mesquite.molec.ColorByAA.ColorByAA; tell It; emphasizeDegeneracy off; endTell; getEmployee #mesquite.molec.SequenceInfoEditor.SequenceInfoEditor; tell It; panelOpen false; endTell; endTell; endTell; endTell; end;