NEXUS
[File created by TreeBASE:  1/16/09  15:29:56]
[Matrix accession#: M3398]

BEGIN TAXA;
	TITLE M3398;
	DIMENSIONS  NTAX=6;
	TAXLABELS
		Mucor_racemosus	Mucor_hiemalis	Poitrasia_circinans	Gilbertella_persicaria	Choanephora_infundibulifera	Blakeslea_trispora
	;
END;

BEGIN CHARACTERS;
	TITLE M3398;
	DIMENSIONS NCHAR=112;
	FORMAT DATATYPE = DNA MISSING = ? GAP = - ;
	MATRIX
		Mucor_racemosus                   CAACTTTTAACAACGGATCTCTTGGTTCTCGCATCGATGAAGAACGTAGCAAAGTGCGATAACTAGTGTGAATTGCATATTCAGTGAATCATCGAGTCTTTGAACGCAACTT
		Mucor_hiemalis                    CAACTTTTAACAACGGATCTCTTGGTTCTCGCATCGATGAAGAACGTAGCAAAGTGCGATAACTAGTGTGAATTGCATATTCAGTGAATCATCGAGTCTTTGAACGCAACTT
		Poitrasia_circinans               CAACTTTTAACAACGGATCTCTTGGCTTTTGCATCGATGAAGAACGTAGCAAATTGCGATAACTAGTGTGAATTGCAAATTCAGTGAATCATCGAGTCTTTGAACGCATCTT
		Gilbertella_persicaria            CAACTTTTAACAATGGATCTCTTGGCTTTTGCATCGATGAAGAACGTAGCAAATTGCGATAACTAGTGTGAATTGCAAATTCAGTGAATCATCGAGTCTTTGAACGCATCTT
		Choanephora_infundibulifera       CAACTTTTAACAACGGATCTCTTGGCTTTTGCATCGATGAAGAACGTAGCAAATTGCGATAACTAGTGTGAATTGCAAATTCAGTGAATCATCGAGTCTTTGAACGCATCTT
		Blakeslea_trispora                CAACTTTTAACAACGGATCTCTTGGCTTTTGCATCGATGAAGAACGTAGCAAATTGCGATAACTAGTGTGAATTGCAAATTCAGTGAATCATCGAGTCTTTGAACGCATCTT
	;
END;

BEGIN CODONS;
CODONPOSSET * CodonPositions = 
 N: 1 - 112 ; 
 CODESET * UNTITLED = Universal: all ; 
 END;

BEGIN ASSUMPTIONS;
OPTIONS DEFTYPE = unord PolyTcount = MINSTEPS ; 
 END;