#NEXUS [written Sat Jan 23 17:07:53 CST 2016 by Mesquite version 3.04 (build 725) at l-PC/192.168.1.198] BEGIN TAXA; TITLE Taxa; DIMENSIONS NTAX=13; TAXLABELS Arborophila_rufipectus Chrysolophus_amherstiae Lophophorus_lhuysii Meleagris_gallopavo Phasianus_colchicus Pucrasia_macrolopha Syrmaticus_reevesii Tetraophasis_szechenyii Tragopan_temminckii Arborophila_ardens Arborophila_brunneopectus Gallus_gallus Anas_platyrhynchos ; END; BEGIN CHARACTERS; TITLE Character_Matrix; DIMENSIONS NCHAR=12967; FORMAT DATATYPE = DNA INTERLEAVE GAP = - MISSING = ?; MATRIX Arborophila_rufipectus GGATCAGACTTATACCTATCAGTTCTACTATTTATCATTGAGTGTTGTCC Chrysolophus_amherstiae GTTATAGACATTTACCTCCAAATTCTAATATTTATCATTGAGTGTTCTCC Lophophorus_lhuysii GTTTTGACCATTCACCTCCAAATTCTAATAGTTATCATTGAGTGTTCTCC Meleagris_gallopavo GTATAGACCATTTACCTCCAAATTCTAATATTTATCATTGAGTGTTCTCC Phasianus_colchicus GTTTTGACCATTTACCTCCAAATTCTAATATTTATCATTGAGTGTTCTCC Pucrasia_macrolopha GTTTAGACCATTTACCTCCAAATTCTAATATTTATCATTGAGTGTTCTTC Syrmaticus_reevesii GTTTTGACCATTTACCTCCAAATTCTAATATTTATCATCGAGTGTTCTCC Tetraophasis_szechenyii GTTTTGACCATTTACCTCCAAATTCTAATATTTATCATTGAGTGTTCTCC Tragopan_temminckii GTTTTGATCATTTACCTCCAAATTCTAATATTCATCATTGAGTGTTCTCC Arborophila_ardens GCAGCACACTT-TACCTTCAA-TTCTACTATTTATCATTGAGTGCTGTCC Arborophila_brunneopectus GCATGAGACTTATACCTATAAGTTTTACTATTTATCATTGAGTGCTGTCC Gallus_gallus GTTTTGATCATTTACCTTCAAATTCTAATATTTATTGTTGAGTGTTGTAC Anas_platyrhynchos GCTTTGACCATTTATTTTCAAATTCTAATAATTATCATTGAGTGGTGCTC Arborophila_rufipectus ACTAAGAATGAAGTTCATTTATCCATGGCAGGGTGGTTGGAACTAGATTT Chrysolophus_amherstiae ACTAAGAATGAAGTTAATTTATCCAGGGCAGAGTGGCTGGAACTAGATTT Lophophorus_lhuysii GCTAAGAATGAAGTTAATTTATCCAGGGCAGAGTGGCTGGAACTAGATTT Meleagris_gallopavo ACTAAGAATGAAGTTAATTTATCCAGGGCAGAGTGGCTAGAACTAGATTT Phasianus_colchicus ACTAAGAATGAAGTTAATTTATCCAGGGCAGAGTAGCTGGAACTAGATTT Pucrasia_macrolopha GCTAAGAATGAAGTAAATTTATCCAGGGCAGAATGGCTAGAACTGGATTT Syrmaticus_reevesii ACTAAGAATGAAGTTAATTTATCCAGGGCAGAGTGGCTGGAACTAGATTT Tetraophasis_szechenyii ACTAAGAATGAAGTTAATTTATCCAGGGCAGAGTGGCTGGAACTAGATTT Tragopan_temminckii ACTAAGAATGAAGTTAATTTATCCAGGGCAGAGTGGCTGGAACTAGATTT Arborophila_ardens ACTAAGAATGAAGTTCATTTATTCATGGCAGGGTGGCTGGAACTAGATTT Arborophila_brunneopectus ACTAAGAATGAAGTTCATTTATCCATGGCAGGGTGGTTGGAACTAGATTT Gallus_gallus ACTAAGAATGAAGTTAATTTATCCATGGCAGGGTGGCTGGAACTAGATTT Anas_platyrhynchos ACCAAA------------------------------TTGGAACTAGA--- Arborophila_rufipectus GACTTTAAGGTTCCTTTCATCCAAAACCATTCTATGATTGTATGTTTCTA Chrysolophus_amherstiae GATTTCAAGGTCCCTTTCATTCAAAACCATTCTATGATTGTACGTTGCTA Lophophorus_lhuysii GACTTCAAGGTCCCTTTCATTCAAAACCATTTTATGATTGTATGTTGCTA Meleagris_gallopavo GAATTCAAGGTCCCTTTCATTCAAAACCATTCTATGATCATATGTTGCTA Phasianus_colchicus GACTTCAAGGTCCCTTTCATTCAAAACCATTCTATGATTGTATGTTGCTA Pucrasia_macrolopha GACTTGAAGGTCCCTTTCATCCAAAACCATTCTATGATTATATGTTGCTA Syrmaticus_reevesii GATTTCAAGGTCCCTTTCATTCAAAACCATTCTATGATTGTATGCTGCTA Tetraophasis_szechenyii GACTTCAAGGTCCCTTTCATTCAAAACCATTCTATGATTGTATGTTGCTA Tragopan_temminckii GACTTCACGGTCCCTTTCATTCAAAACCATTCTATGATTGTATGTTGCTA Arborophila_ardens GACTTTAAGGTTCCTAACACCCAAAACCATTCTATGATTGTATGTTTCTA Arborophila_brunneopectus GACTTTAAGGTTCCTTTCACCCAAAACCATTCTATGATTGTATGTTTCTA Gallus_gallus GACTTCAAGGTCCCTTTTGTGCAAAACCATCCTATGATTGTATGTTTCTA Anas_platyrhynchos ----------------------------ATTCTATGATAGTAT------- Arborophila_rufipectus TCGGAACACCTCTGGTTCTACTGTTTCACAGTCTT---CTTGAGGCCATT Chrysolophus_amherstiae TTAGAACACTTCTGGTTGTATTGTTTCACAGTCTTTTTTTTGTGGACATT Lophophorus_lhuysii TTAGAACACCTCCGGTTGTACAGTTTCACAGTCTTTTTCTTGTGGACATT Meleagris_gallopavo TTAGGACACCTCTGGTTGTATTGCTTCACAATCTTTTTCTTGTGGACATT Phasianus_colchicus TTAGAACACTTCTGGTTGTATTGTTTCACAGTCTTTTTCTTGTGGACATT Pucrasia_macrolopha TTAGAACACCTCTGGTTGTATTGTTTCACAGTCTTTTTCTTGTGGACTTT Syrmaticus_reevesii TTAGAACACTTCCGGTTGTATTGTTTCACAGTCTTTTTCTTGTGGACATT Tetraophasis_szechenyii TTAGAACACCTCTGGTTGTATTGTTTCACAGTCTTTTTCTTGTGGACATT Tragopan_temminckii TTAGAACACCTCTGGTTGTATTGTTTCACAGTCTTTTTTTTGTGGACATT Arborophila_ardens TCGGAACACCTCTGGTTGTACTGTTTCACAGTCTT---CTTGAGGCCATT Arborophila_brunneopectus TCGGAACACCTCTGGTTGTACTGTTTCACAGTCTT---CTTGAGGCCATT Gallus_gallus TTAGAACACCTCTGGTTGTATTGTTTCACAGTCTTTTTCCTGTGGACATT Anas_platyrhynchos ---------CTCTAGATGTATTGTTTCACAGTCTTTGTCTTGCTGACATA Arborophila_rufipectus TTTGCAGTTTTTATAAACAAGTGAGTGTTAAAACAGACCTTGTTGAAAAG Chrysolophus_amherstiae TTTGCAATTTTTATGAACAGGTGAGTGTTAAAACAGACCTTGTTGAAAAG Lophophorus_lhuysii TTTGCAGTTTTTATGAACAGGCAAGTGTTAAAACAGACCTTGTTGAAAAG Meleagris_gallopavo TTTGCAGTTTTTATGAACAGGTGAGTGTTAAAACAGACCTTGTTGAAAAG Phasianus_colchicus TTTGCAATTTTTATGAACAGGTGAGTGTTAAAACAGACCTTGTTGAAAAG Pucrasia_macrolopha TTTGCAATTTTTATGAACAGGTGAGTGTTAAAACAGACCTTGTTGAAAAG Syrmaticus_reevesii TTTGCGATTTTTATGAACAGGTGAGTGTTAAAACAGACCTTGTTGAAAAG Tetraophasis_szechenyii TTTGCAGTTTTTATGAACAGGTGAGTGTTAAAACAGACCTTGTAGAAAAG Tragopan_temminckii TTTGCAATTTTTATGAACAGGTGAGTGTTAAAACAGACCTTGTTGAAAAG Arborophila_ardens TTTGCAGTTTTTATAAACAAGTGAGTGTTAAAACAGACCTTGTTGAAAAG Arborophila_brunneopectus TTTGCAGTTTTTATAAACAAGTGAGTGTTAAAACAGACCTTGTTGAAAAG Gallus_gallus TTTGCAGTTTTTATAAACAGGTGAGTATTAAAACAGACCTTGTTGAAATA Anas_platyrhynchos T--------TTTATAAATAGGTGAGTGTTAAAACAGACCTTGTTGAAGAG Arborophila_rufipectus TTGTCTACAAATCCTGGCCTA-TGTTATAAGAGCG-CTCCGCTCCTTGCT Chrysolophus_amherstiae CTGTCGACAAATCCTGGCCCTATGTTATAAGAGCG-CTCCGCTCTTTGCT Lophophorus_lhuysii TTGTCTACAAATCCTGGCCCTATGTTATAAGAACG-TGCATGGCTTTCCT Meleagris_gallopavo TTGTCTACAAATCCTGGCCTATGGTTATAAGAGTG-CTCCACACTTTGCT Phasianus_colchicus CTGTCGACAAATCCTGGCCCTATGTTATAAGAGGGGCTCCGGACTCT-CT Pucrasia_macrolopha TTGTCTACAAATCCTGGCCCTATGTTATAAGAGTG-CTCCGTTCTTTGCT Syrmaticus_reevesii TTGCCGACAAATCCTGGCC-TATGTTATAAGAGCG-CTCCGCTCTTTGCT Tetraophasis_szechenyii CTGTCTGCAAATCCTGGCCCTATGTTATAAGAACG-TGCATGGCTTTCCT Tragopan_temminckii TTGTCTACAAATCCTGGCCCTACGTTATAAGAGCG-CTCCGCTCTTTGCT Arborophila_ardens TTGTCTACAAATCCTGGCCCAATGTTATAAGAGTG-CTCCGTTCTTTGCT Arborophila_brunneopectus TTGTCTACAAATCCTGGCCCAATGTTATAAGAGGG-GTTCGCTTCTTGCT Gallus_gallus TTGCGTACAAATCCTGGCCCTATGTTATAAGAGCG-CTCCGCTCCTCGCT Anas_platyrhynchos CTGTCTGCAAATCCTGGCCCTATGTTATAAGACTG-GGGGAAAGCTTGCG Arborophila_rufipectus GGGCATCGGGA---ACTCCTGGCCCCATGGCTCTGCTCTGTGTCAGCCTG Chrysolophus_amherstiae GGGCATCAGGAGCAGCTCCCAGCCCCATGGCTCTGCTCTGTGTCAGCTTG Lophophorus_lhuysii GTGAC-TATA-------CGT-TGTCTTTTTGTGTCCCTTATGGAAGCCTG Meleagris_gallopavo GGGCATCAGGAGCAGCTCCCAGCCCTGTGGCTCTGCTCTGTGTCAGCCTG Phasianus_colchicus GTG-ACTATGTGTTG-TCTTTTCCCCGTGGTTATGGTCTGTGTCAGCTTG Pucrasia_macrolopha GGGCATCAGGAGCAGCTCCCAGCCCTGTGGCTCTGCTCTGTGTCAGCCTG Syrmaticus_reevesii GGGCATCAGGAGCAGCTCCCAGCCCCGTGGCTCTGCTCTGTGTCAGCTTG Tetraophasis_szechenyii GTGGCGTATA-------CCCATGCCCTTGGCTCTGCTTTATGGCAGCCTG Tragopan_temminckii GGGCATCAGGAGCAGCTCCCAGCCCCATGGCTCTGCACTGTGTCAGCCTG Arborophila_ardens GGGCATCAGGAGCAGCTCCCAGCCCTGTGGCTCTGCTCTGTGTCAGCCTG Arborophila_brunneopectus GGGCATCGGGAGCAGCTCCTGGCCCCATGGCTCTGCTCTGTGTCAGCCTG Gallus_gallus GGGCATCAGGAGCAGCTCCCAGCCCCATAGCTCTGCTCTGTGTCAGCCTG Anas_platyrhynchos GGGCACTGGGAGCAGCTCCTGGCCCCGTAGCTCTGCTCTGTGTCAGCCTG Arborophila_rufipectus TCCACGTCAAGCACAGCTGCTCCAGGGTCCCGTGGGGTTCTTGTTTTGCT Chrysolophus_amherstiae TCCACATCAAGCACAGCTGCTCCAGGGTCCCGTGTGGTTCTTCTTTTAGT Lophophorus_lhuysii CCCACATCAAGCACAGCTGCTCCAGGGTCCCGTGTGGTTCTTGTTTTGGT Meleagris_gallopavo TCCACATCAAGCACAGCTGCTCCAGGGTCCCATGTGGTTCTTGTTTTAGT Phasianus_colchicus TCCACATCAAGCACAGCTGCTCCAGGGTCCCATGTGGTTCTTGTTTTGGT Pucrasia_macrolopha CCCACATCAAGCACAGCTGCTCCAGGGTCCCGTGTGGTTCTTGTTTTAGT Syrmaticus_reevesii TCCACATCAAGCACAGCTGCTCCAGGGTCCCGTGTGATTCTTCTTTTAGT Tetraophasis_szechenyii TCCACATCAAGCACAGCTGCTTCAGGGTCCCGTGTGGTTCTTGTTTTGGT Tragopan_temminckii TCCACATCAAGCACAGCTGCTCCCAGGTCCCGTGTGCTTCTTGTTTTGGT Arborophila_ardens CCCACATCAAGCACAGCTGCTCCAGGGTCCCGTGTGGTTCTTGTTTTAGT Arborophila_brunneopectus TCCACGTCAAGCACAGCTGCTCCAGGGTCCCGTGGGGTTCTTGTTTTGCT Gallus_gallus TCCACATCAAGCCCAGCTGCTCCAGGGTCCCGTGTGGTTCTTGTTGTGGT Anas_platyrhynchos TCCACGTAAAACCCAGCTGCTCCAGAGCCCTGTAGGTTTCTTGTCTTTGC Arborophila_rufipectus GCTGGTGCTTTGCTTTTTGCATTTTTTCACCCCGTTTTCTGGTCCTGTTA Chrysolophus_amherstiae GTGGGTGCTTTGCTTTTT--------TCACCCCATTTTCTGATCCTGTTA Lophophorus_lhuysii GTTGGTGCTTTGCTTTTTGCATTTTTTCACCCCATTTTCTGGTCCTGTTA Meleagris_gallopavo GTTGGCGCTTTGCTTTTTGCGTTTTTTCACCCCATTTTCTGGTCCTGTTA Phasianus_colchicus GTTGGTGCTTTGCTTTTT--------TCACCCCATTTTCTGATCCTGTTA Pucrasia_macrolopha GTTGGTGCTTTGCTTCTTACATTTTTTCACTCCATTTTCTGATCCTGTTA Syrmaticus_reevesii GTTGGTGCTTTGCTTTTTGCATTTTTTCACCCCATTTTCTGATCCTGTTA Tetraophasis_szechenyii GTTGGTGCTTTGCTTTTTGTATTTTTTCACCCCATTTTCTGGTCCTGTTA Tragopan_temminckii GTTGGTGCTTTGCTTTTTGCGTTTTTTCACCTCATTTTCTGGTCCTGTTA Arborophila_ardens GTTGGTGCTTTGCTTCTTGCATTTTTTCACTCCATTTTCTGATCCTGTTA Arborophila_brunneopectus GTTGGTGCTTTGCTTTTTGCATTTTTTCACCCCGTTTTCTGGTCCTGTTA Gallus_gallus GTTGGTGCTTTGCTTTTTGTGTTTTTTCACCCCATTTTCTGGTCCTGTTA Anas_platyrhynchos GTTTGGGCTTTGCTTTTTGCATTT--CCCCCTCATTTTCTGGTCTTGTTA Arborophila_rufipectus ACTTTTTTGCAAGTGGTTCTAGACCACCTGATTTGGTGGTTGGCAGCCCC Chrysolophus_amherstiae ACTTTTTGGCAAGTAGTTCTAGATTACCTGATTTATTGGTTGGCAACCCT Lophophorus_lhuysii ACTTTTTTGCAAGTAGTTCTAGATGACCTGATTTAGTGGTTGGTGACCCT Meleagris_gallopavo ACTTTTTTGCAAGTAGTTCTAGATGACCTGATTTAGTGGTTGGCAGCCCT Phasianus_colchicus ACTTTTTGGCAAGTAGTTCTAGATTACCTGATTTATTGGTTGGCGACCCT Pucrasia_macrolopha ACTTTTTTGCAAGTAGTTCTAGATTACCTGATTTAGTGGTTGGCAACCCT Syrmaticus_reevesii ACTTTTTGGCAAGTAGTTCTAGATTACCTGATTTATTGGTTGGCAACCCT Tetraophasis_szechenyii ACTTTTTGGCAAGTAGTTCTAGATGACCTGATTTAGTGGTTGGCGACCCT Tragopan_temminckii ACTTTTTTGCAAGCGGTTCTAGATGACCTGATTTAGTGGCTGGCAACTCT Arborophila_ardens ACTTTTTTGCAAGTAGTTCTAGATTACCTGATTTAGTGGTTGGCAACCCT Arborophila_brunneopectus ACTTTTTTGCAAGTGGTTGTAGACCACCTGATTTGGTGGTTGGCAGCCCC Gallus_gallus ACTTTTTTGCGAGTAGTTCTAGATGACCTGATTGAGTGGTTGGCAACCCT Anas_platyrhynchos ACGTTTT------------------------------------------- Arborophila_rufipectus ATGGCAGAGGGTTGGAGCCGGGTGATGTTTAAGGCCCCTTCCAACCTAAA Chrysolophus_amherstiae ATGGCAGAGGGTTGGAGCTGGATGATATTTAAGATTCCTTCTAAACTGAA Lophophorus_lhuysii ATGGCAGAGGGTTGGAGCTGGATGATATTTAAGATCCCTTCTAAACTAAA Meleagris_gallopavo ATGGCAGAGGGTTGGAGCTGGATGATATTTAAGATCCCTCCTAAACTAAA Phasianus_colchicus ATGGCAGAGGGTTGGAGCTGGATGGTATTTAAGATCCCTTCTAAACTAAA Pucrasia_macrolopha ATGGCAGAGGGTTGGATCTAGATGATATTTAAGATCCCTTCTAAACTAAA Syrmaticus_reevesii ATGGCAGAGGGTTGGAGCTGGATGGTATTTAAGATTCCTTCTAAACTAAA Tetraophasis_szechenyii ATGGCAGAGGGTTGGAGCTGGATGATATTTAAGATCCCTTCTAAACTAAA Tragopan_temminckii ATGGCAGAGGGTTGGAGCTGGATGATATTTAAGATCCCTTCTACACTAAA Arborophila_ardens ATGGCAGAGGGTTGGATCTAGATGATATTTAAGATCCCTTCTAAACTAAA Arborophila_brunneopectus ACGGCAGAGGGTTGGAACCGGGTGATGTTTAAGGCCCCTTCCAACCTAAA Gallus_gallus ATGGCAGAGGGTTGGAGCCGGATAATACCTAAGATCCCTTCCAACCCAAA Anas_platyrhynchos ---------GGTTGGACCGAGCTGCTCGCCAAGTCTCTGCCCGTGCTGAA Arborophila_rufipectus GACATTCTGTTCAGTTTCTATTTCGCACGTCACTGAGGGCACATCTCTGA Chrysolophus_amherstiae GCCATTCTCTTCAGTTTCTATTCCAC--GTCACTAAGCTCACATCCCTGA Lophophorus_lhuysii GCCATTCTCTTCAGTTTCTGTTCCACATGTCACTGAGATCACATCCCTGA Meleagris_gallopavo GCCATTCTCTTCTGTTTCTATTCCACATGTCACTGAGCTCACATCTCTGA Phasianus_colchicus GCCATTCTCTTCAGTTTCTATTCCAC--GTCACTAAGCTCACATCCCTGA Pucrasia_macrolopha GCCATTCTCTTCAGTTTCTATTCCACATGTCACTGAGCTCACATCCCTGA Syrmaticus_reevesii GCCATTCTCTTCAGTTTCTATTCCAC--GTCACTAAGCTCACATCCCTGG Tetraophasis_szechenyii GCCATTCTCTTCAGTTTCTATTCCACACGTCACTGAGATCACATCCCTGA Tragopan_temminckii GCCATTCTCTTCAGTTTCTATTCCACATGTCACTGAGATCACATCTTTGA Arborophila_ardens GCCATTCTCTTCAGTTTCTATTCCACATGTCACTGAGCTCACATCCCTGA Arborophila_brunneopectus GACATTCTGTTCAGTTTCTATTCCACACGTCACTGAGGGCACATCCCTGA Gallus_gallus GCCATTCTATTCACTTTCTATTCCACGTGTCACTGAGCTCACATCCCTGA Anas_platyrhynchos GCGACTTGTTGCTGTCTTTGGAGCAG-CCCAGCTGAGTCCAAGGTGCTAA Arborophila_rufipectus CCCCTTCACCCGTCCCACCCCGAGGCACATTTCCATGCACTGCATCCCGG Chrysolophus_amherstiae CCCCATAACCTGCCCCACCCCAAGGCACATTTCCATTCACTGCATCCCAG Lophophorus_lhuysii CCCCATCACCTGCCCCACCCCGAGGCACATTTCCATTCACTGCATCCCAG Meleagris_gallopavo CCCCATCACCTGCCCCACCCCGAGGCACATTTCCATTCACTGCATCCCAG Phasianus_colchicus CCCCATAACCTGCCCCACCCCGAGGCACATTTCCATTCACTGCATCCCAG Pucrasia_macrolopha CCCGATCACCTGCCCCACCCCGAGGCACATTTCCATTCACTGCATCCCAG Syrmaticus_reevesii CCCCATAACCTGCCCCACCCCGAGGCACATTTCCATTCACTGCATCCCAG Tetraophasis_szechenyii CCCCATCACCTGCCCCACCCCGAGGCACATTTCCATTCACTGCATCCCAG Tragopan_temminckii CCCCATCACCTGCCCCACCCCGAGGCACATTTCCATTCACTGCATCCCAG Arborophila_ardens CCCGATCACCTGCCCCACCCCGAGGCACATTTCCATTCACTGCATCCCAG Arborophila_brunneopectus CCCCTTCACCCGTCCCACCCCGAGGCACATTTCCATGCACTGCATCCCGG Gallus_gallus CCCCATCACCTGTCCCACCCCGAGGCACATTTCCATGCACCACATCCCAG Anas_platyrhynchos TTTTAGGGGGTGGTTCTATCAGCCCTGCACACGCAGACAAAATAAGCCAG Arborophila_rufipectus TGGTATCCATGACTTAATGCCAGCCTTGGGGCAGCCCAGCTGAGAAACCC Chrysolophus_amherstiae TGGTATCCATGACTTAATGCCAGCCTTGGGGCAGCCCAGCTGGGAAACCC Lophophorus_lhuysii TGGTATCCATGACTTAATGCCAGCCTTGGGGCAGCCCAGCTGGGAAACCC Meleagris_gallopavo TGGTATCCATGACTTAATGCCAGCCTTGGAGCAGCCCAGCTGGGAAACCC Phasianus_colchicus TGGTATCCATGACTTAATGCCAGCCTTGGGGCAGCCCAGCTGGGAAACCC Pucrasia_macrolopha TGCTATCCATGACTTAATGCCAGCCTTGGAGCAGCCCAGCTGGGAAACCC Syrmaticus_reevesii TGGTATCCATGACTTAATGCCAGCCTTGGGGCAGCCCAGCTGGGAAACCC Tetraophasis_szechenyii TGGTATCCATGACTTAATGCCAGCCTTGGGGCAGCCCAGCTGGGTTGACC Tragopan_temminckii TGGTATCCATGACTTAACGCCAGTCTTGGGGCAGCCCGGCTGGGAAACCC Arborophila_ardens TGCTATCCATGACTTAATGCCAGCCTTGGAGCAGCCCAGCTGGGAAACCC Arborophila_brunneopectus TGGTATCCGTGACTTCATGCCAGCCTTGGGGCAGCCCAGCTGAGAAACCC Gallus_gallus TGGTATCCATGACTTAATGCCAGCTTTGGGGCAGCCCAGCTGAGAAACCC Anas_platyrhynchos TGGTGCCTGTGACTTAATACCAGCATTGGAGTTGTTCCGCCAAGTTCTCC Arborophila_rufipectus AAATGGATTCCGCTCTTTCTGTGTCCCTTATGGCTCGCTGTTGAGCAGGG Chrysolophus_amherstiae AAATGGTTTCAGCTCTTTT-GTGTCCCTTATGGCTCACTGTTGAGCA-TG Lophophorus_lhuysii AAATGGTTTCAGCTCTTTTTGTTCCCCTTATGGCTTACTGTTGAGCA-CG Meleagris_gallopavo AAATGGTTTCAGCTCTTTTTGTGTCCCTTATGGCTTACTGTTGAGCAATG Phasianus_colchicus AAATGGTTTCAGCTCTTTTTGT-TCCCTTATGGCTCACTGTTGAGCA-TG Pucrasia_macrolopha AAATGGTTTCAGCTCTTTTTGTGTCCCTTATGGCCTACTCTT-AGTA--G Syrmaticus_reevesii AAATGGTTTCAGCTCTTTTTGTGTCCCTTATGGCTCGCTGTTGAGCA-CG Tetraophasis_szechenyii AAATGGTTTCAGCTCTTTTTGTTCCCCTTATGGCTTACTGTTGAGCA-TG Tragopan_temminckii AAATGATTTCAGCTCTTTTTGTGTCCCTTATGGCTTACCGTTGAGCA-CG Arborophila_ardens AAATGGTTTCAGCTCTTTTTGTGTCCCTTATGGCTCGCTGTTGAGCAGGG Arborophila_brunneopectus AAATGGATTCCGCTCTTTTTGTGTCCCTTATGGCTCGCTGTTGAGCAGGG Gallus_gallus AAGTGGATTCCGCTCTTTTTGTGTCCCTTATGGCTTACCGTTGAGCAGTG Anas_platyrhynchos C--TGGCTTCAGGTCCTGGTTTTTCCCTTATGGTTGGCTCACAAAAAGCA Arborophila_rufipectus GGATTTTTAAGCGCAGCGATGCCAGTGAGTGCCCCAAACCAGCAGCTGGA Chrysolophus_amherstiae GGATTTTTATGCACAGTGATGCCAGTCACTGCCCCAGC-CAGCAGCCGGA Lophophorus_lhuysii GGATTTTTATGCACAGTGATGCCAGTTACTGCCCCAAA---ACAGCTGAA Meleagris_gallopavo GGATTTTTATGCACAGTGATGCCAGTTACTGCCCCAAAGCAGCAGCTGGA Phasianus_colchicus GGATTTTTATGCACAGTGATGCCAGTTACTGCCCCAGC-CAGCAGCTGGA Pucrasia_macrolopha ACAATTACATGAACGGTGATGCCAGTTACTGCCCCAGC-CAGCAGCTGGA Syrmaticus_reevesii GGATTTTTATGCACGGTGATGCTAGTTACTGCCCCAGC-CAGCAGCTGGA Tetraophasis_szechenyii GGATTTTTATGCACAGTGATGCCAGTTACTGCCCCAAA-CAGCAGCTGGA Tragopan_temminckii GGATTTTTAAGCACAGTGATGCCAGTTACTGCCCCAAA-CAGCAGCTGGA Arborophila_ardens G-ATTTTTAAGCGCAGCGATGCCAGTGAGTGCCCCAAAC-AGCAGCTGGA Arborophila_brunneopectus G-ATTTTTAAGCGCAGCGATGCCAGTGAGTGCCCCAAAC-AGCAGCTGGA Gallus_gallus GGGTTTTTAAGCACGGCGATGCCCATTACTGCCCCAAACCAGCAGCTGGA Anas_platyrhynchos GTAATTCTGCCTGGAAAAGTACACATGGTTATTTTTAGGTTCCTGTTCTT Arborophila_rufipectus ATCAGGC----------GATGCTCCTCCCGCAGAAATCAGTGCTGGAGGG Chrysolophus_amherstiae ATCAGGCACGGAGCAGCGATGCTCCTCCTGCACAAATCAGTGCTGAAGCT Lophophorus_lhuysii ATCAGGCACGGAGCAGCGATGCTCCTCCTGCACAAATCAGTGCTGAAGCT Meleagris_gallopavo ATCAGGCGCGGAGCAGCGATGCTCCTCCTGCACAAATCAGTGCTGGAGCT Phasianus_colchicus ATCAGGCACGGAGCAGCGATGCTCCTCCTGCACAAATCAGTGCTGAAGCT Pucrasia_macrolopha ATCAGGCACGGAGCAGCGATGCTCCTCCTGCACAAATCAGTGCTGGAGCT Syrmaticus_reevesii ATCAGGCACGGAGCAGTGATGCTCCTCCTGCACAAATCAGTGCTGAAGCT Tetraophasis_szechenyii ATCAGGCACGGAGCAGCGATGCTCCTCCTGCACAAATCAGTGCTGAAGCT Tragopan_temminckii ATCAGGCACGTGG-AGCAACGCTCCTCCTGCACAAATCAGGGCTGAAGCT Arborophila_ardens ATCAGGG----------GATGCTCCTCCCGCAGAAATCAGAGCTGGAGGG Arborophila_brunneopectus ATCAGGG----------GATGCTCCTCCCGCAGAAATCAGAGCTGGAGGG Gallus_gallus ATCAGGCATGGAGCGGCAATGCTCCTCCTG----------TGCTGGAGCT Anas_platyrhynchos TTCAAAAATA-ACTGGAGGCATGAATCCAA--------ACCTCCAAAATG Arborophila_rufipectus CAGAATGGAGACCAGCCCGGATGGGGCACTGGGCAGCCCTGCCCATGGCA Chrysolophus_amherstiae CAGAATGGAGACCAGGCTGGATGGGGCACTGGGCAGCCA-----ATGGCA Lophophorus_lhuysii CAGAATGGAGACCAGGCTGGATGGGGCACTGGGCAGCCA-----ATGGCA Meleagris_gallopavo CAGAATGGAGACCAGGCTGGATGGG-CACTGGGCAGCCA-----ATGGCA Phasianus_colchicus CAGAATGGAGACCAGGCTGGATGGGGCACTGGGCAGCCG-----ATGGCA Pucrasia_macrolopha CAGAATGGAGATCAGGCTGGATGGGGCACTGGGCAGCCA-----ATGGCA Syrmaticus_reevesii CAGAATGGAGACCAGGCTGGATGGGGCACTGGGCAGCCA-----ATGGCA Tetraophasis_szechenyii CAGAATGGAGACCGGGCTGGATGGGGCACTGGGCATCCA-----ATGGCA Tragopan_temminckii CAGAACGGAGACCAGGCTGGATGGGGCACTGGGCAGCCA-----ATGGCA Arborophila_ardens CAGAATGGAGACCAGAACAGATGGGGCACTGGGCAGCCCTGCCCATGGCA Arborophila_brunneopectus CAGAATGGAGACCAGAACAGATGGGGCACTGGGCAGCCCTGCCCATGGCA Gallus_gallus CAGAATGGAGACCAGGCTGGATGGGGCACGGGGCAGCCC------TGCCC Anas_platyrhynchos TGGCATCATTTCAAAGCCACAGGGGACGTTGGAGGGCTTTTCAAATACCA Arborophila_rufipectus GTGGGTGGAATGGATGATCTGTAAGGTCCCTCCAACCTGAGCCACTCTGT Chrysolophus_amherstiae GCAGGTGGAATGGATGATCTGTAAGGTCCTTCCAAGCTGAGCCACTCTGT Lophophorus_lhuysii GCAGGTGGAACGGATGATCTGTAAGGTCCCTCCAAGCTGAGCCACTCTGT Meleagris_gallopavo GCAGGTGGAATGGATGATCTGTAAGGTCCCTCCAAGCTGAGCCACTCCGT Phasianus_colchicus GCAGGTGGAATGGATGATCTGTAAGGTCCCTCCAAGCTGAGCCACTCTGT Pucrasia_macrolopha GCAGGTGGAATGGATGATCTGTAAGGTCCCTCCAAGCTGAGCCACTCTGT Syrmaticus_reevesii GCAGGTGGAATGGATGATCTGTAAGGTCCCTCCAAGCTGAGCCACTCTGT Tetraophasis_szechenyii GCAGGTGGAATGGATGATCTGTAAGGTCCCTCCAAGCTGAGCCACTCTGT Tragopan_temminckii GCAGGTGGAATGGATGATCTGTAAGGTCCCTCCAAGCTGAGCCACTCTGT Arborophila_ardens GTGGGTGGAATGGATGATCTGTAAGGTCCCTCCAACCTGAGCCGCTCTGT Arborophila_brunneopectus GTGGGTGGAATGGATGATCTGTAAGGTCCCTCCAACCTGAGCCGCTCTGT Gallus_gallus ACGG----------TGACCCCTAAGGTCCCTCCAACCTGAGTCACTCTGT Anas_platyrhynchos AAACATCAAGTTTCCCACTGAAATAGGGCATCAGAACTGGGACAATCAGT Arborophila_rufipectus AATTCAGTGACCTTCT---CCTGCTCTGCAGAAGGGCCTCAGCAAAGCAG Chrysolophus_amherstiae AATTCAGTGACCTCCTCGTCCTGCTCTGCTGAACGGCCTCAGCAAAGCAG Lophophorus_lhuysii AATTCAGTGACCTCCTCCTCCTGCTCTGCTGAACGGCCTCAGCAAAGCAG Meleagris_gallopavo AATTCAGTGACCTCCTCCTCCTGCTCTGCTGAATGGCCTCAGCAAAGCAG Phasianus_colchicus GATTCAGTGACCTCCTTGTCCTGCTCTGATGAACGGCCTCAGCAAAGCAG Pucrasia_macrolopha AATTCAGCGACCTCCTCCTCCTGCTCTGCTGAATGGCCTCAGCAGAGCAG Syrmaticus_reevesii AATTCAGTGACCTCCTCGTCCTGCTCTGCTGAACGGCCTCAGCAAAGCAG Tetraophasis_szechenyii AATTCAGTGAGCTCCTCCTCCTGCTCTGCTGAATGGCCTCAGCAAAGCAG Tragopan_temminckii AATTCAGTGACCTCCTCCTCCTGCTCTGCTGAATGGCCTCAGCAAAGCAG Arborophila_ardens AATTCGGTGACCTTCT---CCTGCTCTGCAGAAGGGCCTCAGCAAAGCAG Arborophila_brunneopectus AATTCGGTGACCTTCT---CCTGCTCTGCAGAAGGGCCTCAGCAAAGCAG Gallus_gallus AATTCAGTGACCCCCTCCTCTCGCTCTGCTGAATGGCCTCAGCAAAGCAG Anas_platyrhynchos TATCTTGCCTTCTCCT--------TCTGC-----AACCT-------GTGA Arborophila_rufipectus CACAGGGGCATCTTCCTTCAAGGGAAGATGACATTCTGCC-CATGGCAGC Chrysolophus_amherstiae CACATGGGCATGTTA-TTCAAGGGAAGATGACTTTCTGCTGCATGGCTGT Lophophorus_lhuysii CACAGGGGCATGTTACTTCAAGGGAAGATGACCTTCTGCTGCATGGCAGT Meleagris_gallopavo CACAGGGGCATGTTCCTTCAAGGGAAGGTGACTTT--GCTGCATGGCGGT Phasianus_colchicus CACAGGGGCATGTTACTTCAAGGGAAGATGACTTCCTGCTGCATGGCTGT Pucrasia_macrolopha CACAGGGGCATGTTATTTCAAGGGAAGATGACTTTCTGCTGCATGGCAGT Syrmaticus_reevesii CACAGGGGCATGTTACTTCGAGGGAAGATGACTTTCTGCTGCATGGCTGT Tetraophasis_szechenyii CACAGGGGCATGTTACTTCAAGGGAAGATGACCTTCTGCTGCATGGCAGT Tragopan_temminckii CACAGGGGCATGTTACTTCAAGGGGAGATGACTTTCTGCAGCATGGCAAT Arborophila_ardens CACAGGGGCATTGTCCTTCAAGGGAAGATGACTTTC-------------- Arborophila_brunneopectus CACAGGGGCATTGTCCTTCAAGGGAAGATGACTTTCTGTC-CATGGCAGT Gallus_gallus CACAGGGGCATATCACTGCATGGGAAGATGACTTCCTGCTGCATGGCAGT Anas_platyrhynchos C-----------TTATCCCCAGAAACCCTGGTAT-------------GGT Arborophila_rufipectus GCCCCACATACCTGGTGATGGCTCTGATGTTGGATCCACATGGGGATATT Chrysolophus_amherstiae GCCCCACGTGCCTGGTGATGGCTCTGATGTTGGATCCACATGAGGATATT Lophophorus_lhuysii GCCCCATGTGCCTGGTGATGGCTCTGATGTTGGATCCCCATGAGGATATT Meleagris_gallopavo GCCCCACGTGCCTGGAGCTGGCTCTGATGTTGGATCCACATGAGGACATT Phasianus_colchicus GCCCCACGTGCCTGGTGATGGCTCTGATGTTGGATCCACATGAGGATATT Pucrasia_macrolopha GCCCCACGTGCCTGGTGATGGCTCTGATGTTGGGTCCACATGAGGATATT Syrmaticus_reevesii GCCCCACGTGCCTGGTGATGGCTCTGATGTTGGATCCACACGAGGATATT Tetraophasis_szechenyii GCCCCACGTGCCTGGGGATGGGTCTGATGTTGGATCCACCCGTATATATA Tragopan_temminckii GCCCCACGTGCCTGGTGATGGCTCTGCTGTTGGATCCACATGGGGATATT Arborophila_ardens ----------CCTGGTGATGGCTCTGATGTTGGATCCACATGGGGGTATT Arborophila_brunneopectus GCCCCACATACCTGGTGATGGCTCTGATGTTGGATCCACATGGGGGTATT Gallus_gallus GCCCCACGTACGTGGTGATGGCTCTGATGTTGGATCCACATGAGGATATT Anas_platyrhynchos GCCCCAGATACCTGGAGATGGCTCTGATTTTGGATCCACGTGAGGATATT Arborophila_rufipectus TACAACCAGAAACCATGAAAACCCATCCATCTCTTAACTGCAAGGCTGGG Chrysolophus_amherstiae TACAGCCAGAAACCATGAAAACCCATCCATCTCTTAATCGCAATACTGTG Lophophorus_lhuysii TACAGCTAGAAACCATGAAAACCCATCCATCTCTTATTCTCAAAATTGTG Meleagris_gallopavo TACAGCTAGGAACCACGAAAACC-ATCCATCTCTTAACTGCAATACTGGG Phasianus_colchicus TACAGCCAGAAACCATGAAAACCCATCCATCTCTTAATCGCAATACTGTG Pucrasia_macrolopha TACAGCTAGAAACCATGAAAACCCATCCATCTCTTAAC-GCAATACTGTG Syrmaticus_reevesii TACAGCCAGAAACTATGAAAACCCATCCATCTCTTAACCGCAATACTGTG Tetraophasis_szechenyii CACCGGGGGAGACTGGGAGAACAAGACCTTCCCTTTTTCACAAAAGTGTG Tragopan_temminckii TACAGCTAGAAACCATGAAAACCCATCCATCTCTTAATCGCAATACTGTG Arborophila_ardens TACAACTAGAAACCATGAAAACCCATCCATCTCTTAATCGCAATACTGTG Arborophila_brunneopectus TACAACTAGAAACCATGAAAACCCATCCATCTCTTAATCGCAATACTGTG Gallus_gallus TACAGCTGGAAACCATGAAAAGCCATCCATCTCTTAATCGCAATACTGGG Anas_platyrhynchos TACAGTCAGAAACCATGAAAACCCATCTGTCTCTTAATTGCACTACCGGG Arborophila_rufipectus GTATCCCCAAGAATGTCACCGAGCTGTGAGTGCATTGCCAAGGGTCTGCC Chrysolophus_amherstiae GTATCCCCCAGAATGTCACCGAGCTGTGAGTACATTGCCAAGGATCTGCC Lophophorus_lhuysii GTATCCCCAAGAATGTCACTGAGCTGTGAGTACATTGCCAATTTTCTGCC Meleagris_gallopavo GTATCCCCAAGAATGTCACCGAGCTGTGAGTGCATTGCCAAGGGTCTGCC Phasianus_colchicus GTATCCCCAAGAATGTCACCGAGCTGTGAGTGCATTGCCAAGGGTCTGCC Pucrasia_macrolopha GTATCCCGCCAAATGTCACCGAGCTGTGAGTGCATTGCCAAGGGTCTGCC Syrmaticus_reevesii GTATCCCC-AGAATGTCACCGAGCTGTGAGTACATTGCCAAGGATCTGCT Tetraophasis_szechenyii GTATCCCCAAGAATGTCACCGAGCTGTGAGTACATTGCCAAGGGTCTGCC Tragopan_temminckii GTATCCCCAAGAATGTCACCGAGCTGTGAGTGCATTGCCAAGGGTCTGCC Arborophila_ardens GTATCCCCCAGAATGTCACCGAGCTGTGAGTGCATTGCCAAGGGTCTGCT Arborophila_brunneopectus GTATCCCCAAGAATGTCACCGAGCTGTGAGTGCATTGCCAAGGGTCTGCC Gallus_gallus GTATCCCCAAGAATGTCACCGAGCTGTGAGTGCATTGCCAAGGGTCTGCC Anas_platyrhynchos GCATCCCCAAGAACGTCACGGAGCTGTGAGTGCCGCGTCGAGGGGCTCCC Arborophila_rufipectus CTCCTCCCCCTGCTGCTGCTTTGCGGGCAGGGGTCTGTGCCGCAGGGTGC Chrysolophus_amherstiae CTCCTCCCTCCGCTGATGCCTTGTGGGCAGGGGTCTCTGCTGCAGGGTAC Lophophorus_lhuysii CTCCTCCCCCTGCTGATGCCTTGTGGGCAGGGGTCTCTGCTGCAGGGTAC Meleagris_gallopavo TTCCTCCCCCTGCTGCTGCTTTGTGGGCAGGGGTCTGTGCTGCAGGGTAC Phasianus_colchicus TTCCTCCCCCTGCTGCTGCTTTGTGGGCAGGGGTCTGTGCTGCAGGGTAC Pucrasia_macrolopha CTCCTCCCCCTGCTGCTGCTTTGTGGGCGGGGGTCTGTGCCGCAGGGTAC Syrmaticus_reevesii CTCCTCCCCCCGCCGATGCCTTGTGGGCGGGGGTCTCTGCTGCAGGGTAC Tetraophasis_szechenyii CTCCTCCCCCTGCTGCTGC-TCGTGGGCAGGGGTCTGTGCTGCAGGGTAC Tragopan_temminckii CTCCTCTCCCTGCTGCTGCTTTGTGGACAGGGGTCTGTGCCACAGGGTGC Arborophila_ardens CTCCTCCCCCTGCAGCTGCTTTGTGGGCAGGGGTCTGTGCCGCAGGGTGC Arborophila_brunneopectus CTCCTCCCCCTGCTGCTGCTTTGTGGGCAGGGGTCTGTGCCGCAGGGTGC Gallus_gallus CTCCTCTCCCTGCTGCTGCTTTGTGGACAGGGGTCTGTGTCGCAGGGTGC Anas_platyrhynchos TTCCTCCTCCAGCAGTTGCGTTGTGGACCGGGGTCTCTGCTGCAGGGTTT Arborophila_rufipectus CTGGAGATGGGGTCCACCCCTGTCCTGGCTGGGGACATAGGGACCATCAC Chrysolophus_amherstiae CTGGACATGGGGTGCACCCCTGTCCTGGCTGAGGACATAGGGACCACCCC Lophophorus_lhuysii CTGGACATGGGATGCACCCCTGTCCTGGCTGAGGACATAGGGACCATCCC Meleagris_gallopavo CTGGACATGGGGTGCACCGCTGTCCTGGCTGAGGACATAGGGACCATCCC Phasianus_colchicus CTGGACATGGGGTGCACCGCTGTCCTGGCTGAGGACATAGGGACCATCCC Pucrasia_macrolopha CTGGACATGGGGTGCACCCCTGTCCTGGCTGAGGACATAGGGACCATCCC Syrmaticus_reevesii CTGGACATGGGGTGCACCCCTGTCCTGGCTGAGGACATAGGGACCACCCC Tetraophasis_szechenyii CTGAACATGGGATGCACCCCTGTCCTGGCTGAGGACATAGGGACCATCCC Tragopan_temminckii CTGGAGATGGGGTGCACCCCTGTCCTGGCTGGGGACATAGGGACCATCCC Arborophila_ardens CTGGAGATGGGGTCCATCCCTGTCCTGGCTGGGGACATAGGGACCATCAC Arborophila_brunneopectus CTGGAGATGGGGTCCACCCCTGTCCTGGCTGGGGACATAGGGACCATCAC Gallus_gallus CTGGAGATGGGGTGCACCCCTGTCCTGGCTGGGGACATAGGGACCATCCC Anas_platyrhynchos CTGGGGATGGGGTGCACCCCTGTCCTGCCTGGGGACATGGGGACCAGCCC Arborophila_rufipectus TGGGGGCAGCACCCCACCTCTGGGGTGCTGAAGG--GGGTTGGATGGGGC Chrysolophus_amherstiae TGGGGGAGGCACCCCACCCCTGGGGTGCCCAAGGCAGGGTTGGATGGGGC Lophophorus_lhuysii TGGGGGCGGCACCCCACCCTTGGGGTGCCCAAGGCAGGGTTGGATGGGGC Meleagris_gallopavo TGGGGGAGGCATCCCACCCCTGGGGTGCCCAAGGCAGGGTTGGATGG--- Phasianus_colchicus TGGGGGAGGCATCCCACCCCTGGGGTGCCCAAGGCAGGGTTGGATGG--- Pucrasia_macrolopha TGGGGGCGGCATCCCACCCCTGGGGTGCCCAAGGCAGAGTTGGATGGGTC Syrmaticus_reevesii TGGGGGAGGCACCCCACCCCTGGGGTGCCCAAGGCAGGGTTGGATGGGGC Tetraophasis_szechenyii TGGGGGCAGCACCCCACCCTTGGGGTTCCCAAGGCAGGGTTGGATGGGGC Tragopan_temminckii TGGGGGTGGCACACCGCCCCTGGGGTGTCCAAGGCAGGGTTGGATGGGGC Arborophila_ardens TGGGGGCAGCACCCCACCTCTGGGGTGCTGAAGG--GGGTTGGATGGGGC Arborophila_brunneopectus TGGGGGCAGCACCCCACCTCTGGGGTGCTGAAGG--GGATTGGATGGGGC Gallus_gallus TGGGGGTGGCACACCGCCCCTGGGGTGTCCAAGGCAGGGTTGGATGGGGC Anas_platyrhynchos CAGGGGG------------------------------------------- Arborophila_rufipectus CCTGATCTGGTGGGGGGCAGAAATCCATGGGCTTTAAGGTCCCTTCCAAG Chrysolophus_amherstiae CCTGATCTAGTGGGGAGCAGAAATGCATGGGCTTTAAGATCCCTTACAAC Lophophorus_lhuysii CCTGATCTGGTGGGGGGCAGAAATGCATGGGCTTTAAGATCCCTTACAAT Meleagris_gallopavo ----ATCTAGTGAGGGGCAGAAATGCATGGGCTTTAAGGTCCCTTACAAC Phasianus_colchicus ----ATCTAGTGAGGGGCAGAAATGCATGGGCTTTAAGGTCCCTTACAAC Pucrasia_macrolopha CCTAATCTAGTGAGGGGCAGAAATGCGTGGGCTTTAAGGTCCCTTACAAC Syrmaticus_reevesii CCTGATCTAGTGGGGAGCAGAAATGCATGGGCTTTAAGATCCCTTACAAC Tetraophasis_szechenyii CCTGATCTGGTGGGGGGCAGAAACGCATGGGCTTTAAGATCCCTTACAAC Tragopan_temminckii CCCTATCTGGTGGGGGGCAGAAATGCTTGGGCTTTAAGGTCCCTTCCAAG Arborophila_ardens CCTGATCTGGTGGGGGGCAGAAATCCATGGGCTTTAAG-TCCCTTCCAAG Arborophila_brunneopectus CCTGATCTGGTGGGGGGCAGAAATCCATGGGCTTTAAGGTCCCTTCCAAG Gallus_gallus CCCTATCTGGTGGGGGGCAGAAATGCTTGGGCTTTAAGGTCCCTTCCAAC Anas_platyrhynchos ----------------------------------------CCGTCTCAA- Arborophila_rufipectus ACAACCATTCAGCGATTCCATGACCGTGCCCAAGGGGTGCTGTGCAGGGG Chrysolophus_amherstiae ACAGCCATGCTGTGATTCCATGGCCATGCCCAAGGGGTGATGTGCAGGGG Lophophorus_lhuysii GCAGCCATTCTGTGATTCCATGACCATGCCCAAGGGGTGATGTGCAGGGG Meleagris_gallopavo ACAGCCATTCTGTCATTCCATGGCCATGCCCAAAGGGTGATGTACAGGGG Phasianus_colchicus ACAGCCATTCTGTCATTCCATGGCCATGCCCAAAGGGTGATGTACAGGGG Pucrasia_macrolopha ACAGCCATTCTGTGATTCCATGGCCATGCCCAAGGGGTGATGTACAGGGG Syrmaticus_reevesii ACAGCCATTCTGTGATTCCATGGCCATGCCGAAGGGGTGACGTGCAGGGG Tetraophasis_szechenyii ACAGCCATTCTGTGATTCCATGACCATGCCCAAGGGGTGATGTGCAGGGG Tragopan_temminckii ACAACCATTCAGCGATTCCATGACCGTGCTCAAGGGGTGCTGTGCAGGGG Arborophila_ardens ACAACCATTCAGTGATTCCATGACCATGCCCAAGGGGTGCTGTGCAGGGG Arborophila_brunneopectus ACAACCATTCAGCGATTCCATGACCGTGCTCAAGGGGTGCTGTGCAGGGG Gallus_gallus ACAACCAATCTGTGATTCCATGACCGTGCCCAAGGGGTGATGTGCAGGGG Anas_platyrhynchos --------------ACCCCATGCCCCTCCCCAAAGGGTCCTCTCTCGCAC Arborophila_rufipectus CTGTTGTCACACGCCAGGGCTCTGCAGTCCCCAGCAGCCTGCCACCAGTG Chrysolophus_amherstiae CTGTTGACACACCCCAGGGCTCTGCAGTCCCTAGCAGCTTGCCACCAGTG Lophophorus_lhuysii CTGTTGTCACACCCCAGGGCTCTGCAGTCCCCAGCAGCCTGCCACCAGTG Meleagris_gallopavo CTGTTGTCACACCCCAGGGCTCTGCAGTCCCCAGCAGCCTGCCACCAGTG Phasianus_colchicus CTGTTGTCACACCCCAGGGCTCTGCAGTCCCCAGCAGCCTGCCACCAGTG Pucrasia_macrolopha CTGTTGTCACATCCCAGGGCTCTGCAGTCCCCAGCAGCCTGCCACCAGTG Syrmaticus_reevesii CTGTTGTCGCACCCCAGGGCTCTGCAGTCCCCAGCAGCCTGCCACCAGTG Tetraophasis_szechenyii CTGTTGTCACACCCCAGGGCTCTGCAGTCCCCAGCAGCCTGCCACCAGTG Tragopan_temminckii CTGTTGTCACACCCCAGGGCTCTGCAGTCCCCAACAACCTGCCACCAGTG Arborophila_ardens CTGTTGTCACACCCCAGGGCTCTGCAGTCCCCAACAACCTGCCACCAGTG Arborophila_brunneopectus CTGTTGTCACACCCCAGGGCTCTGCAGTCCCCAACAACCTGCCACCAGTG Gallus_gallus CTGTTATCACAACACAGGGCTCTGCAGTCCCCAGCAGCTTGCCACCAGAG Anas_platyrhynchos TTGTTGCGATGCTTGCGGCCTCTGCAGGCGGCGGGTGTGTGCCACAAGCA Arborophila_rufipectus TTGGCCCACGCTGTCCACATCCATGCAAATGTATGCCACCCCCTCAGGAG Chrysolophus_amherstiae CTGGCCCACGCTGTACACATCTATGCAAATGTATGCCACCCCCTTGGGAG Lophophorus_lhuysii CTGGCCCACACTGTACACATCCATGCAAATGTATGCCACCCCCTAAGGAG Meleagris_gallopavo CTGGCCCATTCTGTACACATCCATGCGAATGTATGCCACCCCCTCAGGAG Phasianus_colchicus CTGGCCCATTCTGTACACATCCATGCAAATGTATGCCACCCCCTAAGGAG Pucrasia_macrolopha CTGGCCCACGCTGTACACATCCATGCAAATGTATGCCACCCCCTGAGGAG Syrmaticus_reevesii CTGGCTCACGCTGCACACATCCATGCAAATGTATGCCACCCCCTAAGGAG Tetraophasis_szechenyii CTGGCCCACGCTGTACACATCCATGCAAATGTATGCCACCCCCTAAGGAG Tragopan_temminckii TTGGCCCACGCTGTACACTTCCATGCAAATGTATGCCACCCCCTAAGGAG Arborophila_ardens TTGGCCCACGCTGTACACTTCCATGCAAATGTATGCCACCCCCTAAGGAG Arborophila_brunneopectus TTGGCCCACGCTGTACACTTCCATGCAAATGTATGCCACCCCCTAAGGAG Gallus_gallus CTGGCCCATGCTGTACACATCCATACAAATGTATGCCACCCCCTCAGGAG Anas_platyrhynchos AATGTCTGCCTCACACACACTGCCGGGGATGTATGCCACCCCCGAGTCAG Arborophila_rufipectus CAGCAGAAATTACGCCACAGTTGTGTTAACACTATTTTCATCTTTTCTTT Chrysolophus_amherstiae CAGCAGAAATTATGCCACAGTTGTGTTAACACTATTTTCATCTTTTCTTT Lophophorus_lhuysii CAGCAGAAATTATGCCACAGTTGTGTTAACACTATTTTCATCTTTTCTTT Meleagris_gallopavo CAGCAGAAATTATGCCGCAGTTGTGTTAACACTATTTTCATCTTTTCTTT Phasianus_colchicus CAGCAGAAATTATGCCACAGTTGTGTTAACGCTATTTTCATCTTTTCTTT Pucrasia_macrolopha CAGCAGAAATTATGCCACAGTTGTGTTAACACTATTTTCATCTTTTCTTT Syrmaticus_reevesii CAGCAGAAATTATGCCACAGTTGTGTTAACACTATTTTCATCTTTTCTTT Tetraophasis_szechenyii CAGCAGAAATTATGCCACAGTTGTGTTAACACTATTTTCATCTTTTCTTT Tragopan_temminckii CAGCAGAAATTATGTCACAGTTGTGTTAACACTATTTTCATCTTTTCTTT Arborophila_ardens CAGCAGAAATTATGCCACAGTTGTGTTAACACTATTTTCATCTTTTCTTT Arborophila_brunneopectus CAGCAGAAATTATGCC-CAGTTGTGTTAACACTATTTTCATCTTTTCTTT Gallus_gallus CAGCAGAAATTATGCCACAGTTGTGTTAACACTATTTTCATCTTTTCTTT Anas_platyrhynchos CAACAGCAATTATGCCACCGTTGTGTTAACAACATTTTCATCTTCTCTTT Arborophila_rufipectus GATGTTGCCAACTGTTCTCATTATAGTGAGCATCTTCTCACTGGTTTGTG Chrysolophus_amherstiae GATGTTGCCAACTGTTCTTCT-ACAGTGAGCATCTCGTCACTGGTATGTG Lophophorus_lhuysii GATGTTGCCAACTGTTCTCATTGTAGTGAGCATCTCGTCACTGGTATGTG Meleagris_gallopavo GATGTTGCCAACTGTTCTCATTATAGTGAGCATCTCATCACTGGTATGTG Phasianus_colchicus GATGTTGCCAACTGTTCTTCTTATAGTGAGCATCTCGTCACTGGTATGTG Pucrasia_macrolopha GATGTTGCCAACTGTTCTCATTATAGTGAGCATCTTGTCACTGGTATGTG Syrmaticus_reevesii GATGTTGCCAACTGTTCTTCTTATAGTGAGCATCTCGTCACTGGTATGTG Tetraophasis_szechenyii GATGTTGCCAACTGTTCTCACTGTAGTGAGCATCTTGTCACTGGTATGTG Tragopan_temminckii GATGTTGCCAACTGTTCTCATTATAGTGAGCATCTCGTCACTGGTGTGTG Arborophila_ardens GATGTTGCCAACTGTTCTCATTACAGTGAGCATCTTCTCACTGGTTTGTG Arborophila_brunneopectus GATGTTGCCAACTGTTCTCATTACAGTGAGCATCTTCTCACTGGTTTGTG Gallus_gallus GATGTTGCCAACTGTTGTCATTATAGTGAGCATCTTGTCACTGGGATGTG Anas_platyrhynchos GATGTTGCCAACTGTTCTCATTTCAGTGAGGATCTTGTCACTGGTGTGTG Arborophila_rufipectus ATTTAGTTGAAAGGTATTTTTTGATTTTTTCTTGAAAAGAATATAGCACT Chrysolophus_amherstiae ATATAGTTGAAAGTCATTTTCAGAAATTTTCTGGAAAACAATACAGCACT Lophophorus_lhuysii ATACAGTTGAAAGTCATTTTCGGAAATTTTCTGGAAAACAATACAGCACT Meleagris_gallopavo AAATAGTTGAAAGTCATTTTCGGAAATTTTCTGGAAAACAGTACAGCACT Phasianus_colchicus ATATAGTTGAAAGTCATTTTCAGAAATTTTCTGGAAAACAATACAGCACT Pucrasia_macrolopha ATGTAGTTCAAAGTCATTTTCGGAAATTTTCTGAAAAACAATACAGCACT Syrmaticus_reevesii ATATAGTTGAAAGTCATTTTCAGAAATTTTCTGGAAAACAATACAGCACT Tetraophasis_szechenyii ATATAGTTGAAAGTCATTTTCGGAAATTTTCTGGAAAACAATACAACACT Tragopan_temminckii ATATAGTTGAAAGTCACTTTCGGAAATTTTCTGGAAAACAATACAGCACT Arborophila_ardens ATTTAGTTGAAAGGTATTTTTTGAAATTTTCTGGAAAACAATATAGCACT Arborophila_brunneopectus ATTTAGTTGAAAGGTATTTTTTGAATTTTTCTTGAAAACAATATAGCACT Gallus_gallus ATTTAGTTGAAAGGCATTTTCAGAAATTTTCTGGAAAA-AGTACAGCACT Anas_platyrhynchos AT-TAGTTGAAACACATTTCCATAAATTTTCTGGAAAATAATGTAGCAGG Arborophila_rufipectus GAGACAGAATCTACTTTTTGTGTATTTTTCCTCTGTGTTCTTTTGGAAAG Chrysolophus_amherstiae GAGGTAGAATCTACCTTGTGTGTAATTTTTCT--GTGTTCTTTTGGAAAG Lophophorus_lhuysii GAGGTAGAATCTACTTTTTGTGTAATTGTTCTCTGTGTTCTTTTGGAAGG Meleagris_gallopavo GAGGTAGGATCTACTTTTTGTGTAATTTTTCTCTGTATTCTTTTGGAAAG Phasianus_colchicus GAGGTAGAATATACTTTTTGTGTAATTTTTCACTGTGTTCTTTTGGAAAG Pucrasia_macrolopha GAGATAGAATCTACTTTTTGTGTAATTTTTCTCTGTGTTCTTTTGGAAAG Syrmaticus_reevesii GAGGTAGAATCTACTTTTTGTGTAATTTTTCTCTGTGTTCTTTTGGAAAG Tetraophasis_szechenyii GAGGTAGAATCTACTTTTTGTGTAATTTTTCTCTGTGTTCTTTTGGAAGG Tragopan_temminckii GAGATAGAATCTACTTCTTATGTAATTTTTCTCTGTGTTCTTTTGGAAGG Arborophila_ardens GAGACAGAATCTACTTTTTGTGTATTTTTCCTCTGTGTTCTTTTGGAAAG Arborophila_brunneopectus GAGACAGAATCTACTTTTTGTGTATTTTTCCTCTGTGTTCTTTTGGAAAG Gallus_gallus GAGGAAGAATCTACTTTTTCTGTGCTTTTTCTCTGTGTTCTTTTGGAAAG Anas_platyrhynchos GTGGTAAAATCTACTTTTTGTGTATTTTTTCTCTTTTGTTTTATGGAGAG Arborophila_rufipectus GCTGATAATTCACTGGTAACTAGGGGA-TGAATTTCTTATTTTTCCTTTT Chrysolophus_amherstiae ACTGACAATTCACCGGTGACTGGGGGA-CGAAGTTCTTATTTTTCCCTCT Lophophorus_lhuysii GCTGACAATTCACTGGTAACTAGGGGA-TGAAGTTCTTATTTTTCCTTCT Meleagris_gallopavo GCTGACAATTCACTGTTAATTAGGGGA-TGAAGTTCTTATTTTTCCTTCT Phasianus_colchicus GCTGACAATTCACTGGTGACTAGGGGA-TGAAGTTCTTATTTTTCCTTCA Pucrasia_macrolopha GCTGACAATTCACTGGTAGCTAGGGGA-TGAGGTTCTTATTTTTTCTTCT Syrmaticus_reevesii GCTGACATTTCACTGGTGTCTAGGGGA-TGAAGTTCTTATTTTTCCTTCT Tetraophasis_szechenyii GCTGACAATTCACTGGTAACTAGGGGA-TGAAGTTCTTATTTTTCCTTCT Tragopan_temminckii GCTGACAGTTCACTGGTAACTAGGGGA-TGAAGTTCTTATTTTTCCTTCT Arborophila_ardens ACTAACAATTCACTGGTAACTAGGGGA-TGAATTTCTTACTTTTCCTTTC Arborophila_brunneopectus GCTAACAATTCACTGGTAACTAGGGGA-TGAATTTCTTACTTTTCCTTTC Gallus_gallus ACTGACCATTCA-TGATAACTAGGGGGGTGAATTTCTTATTTTTCCTTCT Anas_platyrhynchos GATAACAATTCATTGGTAACTAGGAGA-TGAATTTATTATTTTTCTTTCT Arborophila_rufipectus TATTGTCTCTTAATCTAGAAACGACCTCTTCTCTTACCACACATGAATTA Chrysolophus_amherstiae TATTGTTTCTTAACATAGAAACTACCTCTTCTCTTACCACACATGGATTA Lophophorus_lhuysii TATTGGCTCTTAACATAGAAACTACATATTCTCTTACCACACATGGATTA Meleagris_gallopavo TATTGGCTCTTAACATAGAAACTACCTCTTCTCTTACCACACCTGGATTA Phasianus_colchicus TATT-TTTTTTAACATAGAAACTACCTCTTCTCTTACCACACATGGATTA Pucrasia_macrolopha TATTCGCTCTTAACATAGAAACTACCTCTTCTCTTACCACACATGGATTA Syrmaticus_reevesii TATTGGCTCTTAACATAGAAACTACCTCTTCTCTTACCACACATGGATTA Tetraophasis_szechenyii TATTGGCTCTTAACATAGAAACTAGCTATTCTCTTACCACACATGGATTA Tragopan_temminckii TATTGGCTCTTAACATAGAAACTACCTATTCTCTTACCACACATGGATTG Arborophila_ardens TATTGTCTCTTTATCTAGAAACGACCTCTTCTCTTACCACACATGAATTA Arborophila_brunneopectus TATTGTCTCTTAATCTAGAAACGACCTCTTCTCTTACCACACATGAATTA Gallus_gallus TATTGGCTCTTAACCTAGAAACTACCTCTTCTCTTACCACACATGGATTA Anas_platyrhynchos TAATGGCTCTTAACCTAAATACTACCTCTACTACTACCATAAAAGGAAGA Arborophila_rufipectus TTTTGAATTATCACAGAATTAATCATAGAATCACAGAATGGCCTGGGTTG Chrysolophus_amherstiae TTTTGAATTATCATAGAATGAATCGCAGAATCATAGAATGGCCTGGGTTG Lophophorus_lhuysii TTTTGAATTATCATAGAATGAATCATAGAATCATAGAATGGCCTGGGTTG Meleagris_gallopavo TTTTGAATTATCATGGAATGAATCATAGAATCATAGAATGGCCTGGGTTG Phasianus_colchicus TTTTGAATTATCATAGAATGAATCGTAGAATCATAGAATGGCCTGGGTTG Pucrasia_macrolopha TTTTGAATTATCATAGCATGAATCATAGAATCATAGAATGGCCTGGGTTG Syrmaticus_reevesii TTTTGAATTATCATAGAATGAATTGTAGAATCATAGAATGGCCTGGGTTG Tetraophasis_szechenyii TTTTGAATTATCATGGAATGAATCATAGAATCATAGAATGGCCTGGGTTG Tragopan_temminckii TTTTGTATTATCATAGAATGAATCATAGAATCATAGAATGGCCTGGATTG Arborophila_ardens TTTTGAATTATCGCAGAATTAATCATAGAATCACAGAATGGCCTGGGTTG Arborophila_brunneopectus TTATGATTTATCGCAGAATTAATCATAGAATCACAGAATGGCCTGGGTTG Gallus_gallus TTTGGAATTAT--------------------------------------- Anas_platyrhynchos GTGGGAAGAATTG------------------------------------- Arborophila_rufipectus AAAAGAACCACAATGATCACTCAGTTTCAACCCCCCTGCTATGTGCAGGG Chrysolophus_amherstiae AAAAGGACCTCAAAGATCATGTAGTTTTAACCCCCCTGCTATGTGCAGGG Lophophorus_lhuysii AAAAGGACCTCAAAGATCATCTAGTTTCAACCCCT-TGCTGTGTGCAGGG Meleagris_gallopavo AAAAGGACCCCAAAGATCATCTAGTTTCAACCCCC-TGCTATGTGCAGGG Phasianus_colchicus AAAAGGACCACAGTGATCATCTAGTTTCAACCCCCCTGCTGTGTGCAGGG Pucrasia_macrolopha AACAGGGCCTCAAAGATCATCTAGTTTCAACACCC-TGCTATGTGCAGGG Syrmaticus_reevesii AAAAGGACCTCAAAGATCACCTAGTCTCAACCCCC-TGCTGTGTGCAGGG Tetraophasis_szechenyii AAAAGGACCTCAAAGATCATGTAGTTTCAACCCCCCTGCTATGTGCAGGG Tragopan_temminckii AAAAGGACCTCAAAGATCATGTAGTTTCAACCCCCCTGCTATGTGCAGGG Arborophila_ardens AAAAGAACCACAATGATCACGCATTTTCAACCCCC-TGCTATGTGCAGGG Arborophila_brunneopectus AAAAGGACCACAATGATCACTCATTTTCAACCCCC-TGCTATGTGCAGGG Gallus_gallus -------------------------------------------------- Anas_platyrhynchos -----------------CACCTATATTTGAC------------------- Arborophila_rufipectus TCGCCAACCACCAGACCAGG-TGCCCAGAGCCACATCCAGCCTGGCCTTG Chrysolophus_amherstiae TCGCCAACCACCAGACCAGGCTGCCCAGAGCCACATCCAGCCTGGCCTTG Lophophorus_lhuysii TCGCCAACCCCCAGACCAGTCTGCCCAGAGCCACATCCAGCCTGGCCTTG Meleagris_gallopavo TTGCCAACCACCAGACCAGGCTGCTCAGAGCCACATCCAGCCTGGCCTTG Phasianus_colchicus TCGCCAACCACCACACCAGGCTGCCCAGAGCCACATCCAGCCTGGCCTTG Pucrasia_macrolopha TCGCCAACCACCAGACCAGGCTGCCCAGAGCCACATCCAGCCTGGGCTTG Syrmaticus_reevesii TCGCCAACCACCAGACCAGGCTGCCCAGAGCCACATCCAGCCTGGCCTTG Tetraophasis_szechenyii TCGCCAACCACCAGACCAGGCTGCCCAGAGCCACATCCAGCCTGGCCTTG Tragopan_temminckii TCACCAACCACCAGACCAGGCTGCCCAGAGCCACATCCAGCCCGGCCTTG Arborophila_ardens TCACCAACCATCAGACCAGGCTGCCCAGAGCCACATCCAGCCTGGCCTTG Arborophila_brunneopectus TCCCCAACCACCAGACCAGGCTGCCCAGAGCCACATCCAGCCTGGCCTTG Gallus_gallus -------------------------------------------------- Anas_platyrhynchos -------------------------------------------------- Arborophila_rufipectus AATGCCTCCAGGGATGGGGCATCCACAGCCTCCTTGGGCAACCTGTTCCA Chrysolophus_amherstiae AATGCCTGCAGGGATGGGGCATCCACAACCTCCTCGGGCAACCTGTTCCA Lophophorus_lhuysii AATGCCTCCAGGGATGGGGCATCCACAACCTCCTTGGGCAACCTGTTCCA Meleagris_gallopavo AATGCCTCCAGGGATGGGGCATCCACAACCTCCTTGGGCAACCCATTCCA Phasianus_colchicus AATGCCTCCAGGGATGGGGCATCCACAGCCTCCTTGGGCAACCTGTTCCA Pucrasia_macrolopha AATGCCTCCAGGGATGGGGCATCCACAGTCTCCTTGGGCAACCTGTTCCA Syrmaticus_reevesii AATGCCTCCAGGGATGGGGCATCCACAACCTCCTTGGGCAACCTGTTCCA Tetraophasis_szechenyii AATGCCTCCAGGGATGGGGCATCCACAGCCTCCTTGGACAACCTGTTCCA Tragopan_temminckii AATGCCTCCAGAGATGGGGCATCCACAACCTCCTTGGGCAACCTGTTCCA Arborophila_ardens AATGCCTCCAGGGATGGGGCATCCACAGCCTCCTTGGGCAACCTGTTCCA Arborophila_brunneopectus AATGCCTCCAGGGATGGGGCATCCCCAGCCTCCTTGGGCAACCTGTTCCA Gallus_gallus -------------------------------------------------- Anas_platyrhynchos AATACCTCCAGGGATGGGG------------------------------- Arborophila_rufipectus GTGCGTCACCACCCTCTGTGTGAAAAAATTCCTCCTAATCTCTAACCTAA Chrysolophus_amherstiae GTGCATCACCACCCTCTGTGTGAAAAACTTCCTCCTAATATCTAACCTAA Lophophorus_lhuysii GTGCATCACCAC--------TGGAACACCACC-------ATCTAACCTAA Meleagris_gallopavo GTG--TCACCAACCTCTGGGTGAAAAACTTCCTCCTAGTATCTAACCTAA Phasianus_colchicus GTG--TCACCAACATCTGTGTGAAAAATTTCCTCCTAATATCCAACCTAA Pucrasia_macrolopha GTG--TCACCAACCTCTGGGTGAAAAACTTCCTCCTAATATCTAACCTAA Syrmaticus_reevesii GTGTGTCACCAACGTCTGTGTGAAAAACTTCCTCCTAATATCTA-TCTAA Tetraophasis_szechenyii GTGCATCACCACCCTCTGTGTGAAAAACTTCCTCCTAATATCCAACCTAA Tragopan_temminckii GTGCATCACCACCCCCTTTGTGAAAAACTTCCTCCTAATATCTAACCTAA Arborophila_ardens GTGCATCACCACCCTCTGAGTGGAAAACTTCCTCCTAACCTCTAACCTAA Arborophila_brunneopectus GTGCCTCACCACCCTCTGAGTGGAAAACTTCCTCCTAACCTCTAACCTAA Gallus_gallus ------------------------A------------------------- Anas_platyrhynchos -------------------------------------------------- Arborophila_rufipectus ACCTCCTCTGTCTCAGTTTAAAACCATTCCCCCTTGTCCTATCACTATCC Chrysolophus_amherstiae ACCTCCCCTGTCTCAGTTTAAAACCATTCCTCCTTGTTCTATCACTATCC Lophophorus_lhuysii ATCTCCCCTGTCTCAGTTTAAAACCATTCCCCCTTGTCCTATCACTATCC Meleagris_gallopavo ACCTCCCCTGTCTCAGTTTAAAACCATTCCTTCTTGTTCTATCACTATCC Phasianus_colchicus TTCTCCCCTGTCTCAGTTTAAAACCATTCCTCCTTGTTCTATCATTATCC Pucrasia_macrolopha ATCTCCCCTGC------TTAAAACCATTCCTCCTTGTTATATCACTATCC Syrmaticus_reevesii ACCTCCCCTCTCTCAGTTTAAAACCATTCCTC---ATTCTATCACTATCC Tetraophasis_szechenyii ATCTCCCCTGTCTCAGTTTAAAACCATTCCCCCTTGTCCTATCACTATCC Tragopan_temminckii ACCTCCCCTGTCTTAGTTTAAAACCATTCCCCCTTGTCCTATCACTATCC Arborophila_ardens ACCTCCTCTGTCTCAGTTTAAAACCATTCCCCCTTGTCCCATCACTATCC Arborophila_brunneopectus ACCTCCCCTGTCTCAGTTTAAAACCATTCCCCCTTGTCCTATCCCTATCC Gallus_gallus -------------------------------------------------- Anas_platyrhynchos -------------------------ATTTTTTCTTATCTTTT-------- Arborophila_rufipectus ACCCTCCTAAACAGCTGTTGCCCTTCTGTTTGTATCCTCCCTTCAAATAC Chrysolophus_amherstiae ACTCTTGTAAACGGCCGTTGCTCTCCTTTTTGTATGCTCCCTTCAAATAC Lophophorus_lhuysii ACTCTTGTAAACAGCCGTTGCTCTCCTGTTTATACGCTCCCTTCAAACAT Meleagris_gallopavo ACTCTTGTAAACAGCCGTTGCTCTCCTGTTTATATGCTCCCTCCAAATAT Phasianus_colchicus ACTCTTGTGAATGGCCATTGCTCTCCTATTTATATGCTCCCTTCAAATAC Pucrasia_macrolopha ACTCTTGTAAACAGCCATTGCTCTCCT---------------TCAAATAT Syrmaticus_reevesii ACTCTTGTAAACGGCC-----TCTCCTATTTATATGCTCCCTTCAAATAC Tetraophasis_szechenyii GCTCTTGTAAACAGCCGTTGCTCTCCTGTTTATATGCTCCCTTCAAACAT Tragopan_temminckii ACTCTTGTAAACAGCCGTTGCTCACCTGTTCATATGCTCCCTTCAAATAT Arborophila_ardens ACCCTCGTAAACAGCTGTTGCCCTTCTGTTTGTATCCTCCCTTCAAATAC Arborophila_brunneopectus ACCCTCGTAAACAGCTGTTGCCCTTCTGTTTGTATCCTCCCTTCAAATAC Gallus_gallus -------------------------------------------------- Anas_platyrhynchos -------------------------------------------------- Arborophila_rufipectus TAGAAGGGGAAATTATGGAAAAAGACAAATGAGAAGAATTGAACCTGTAT Chrysolophus_amherstiae TGGAA------ATTATGGAAAAAGACAAATGAGAAGAATTTAACCTATAT Lophophorus_lhuysii TGGAAGGGGAAATTATGGAAAAAGACAAATGAGAAGAATTTAACCTGTAT Meleagris_gallopavo TGGAAGGGGAAATTAGGGAAAAAGACAAAGGAGAAGAATTTAACCTATAT Phasianus_colchicus TGGAAGGGGAAATTATGGAAAAAGACAAATGAGAAGAATTTAACCTGTAT Pucrasia_macrolopha TGGAAGGGGAAATTATGGAAAAAGACAAATGAGAAGAATTTAACCTATAT Syrmaticus_reevesii TGGAAGGGGAAATTATGGAAAAAGACAAATGAGAAGAATTTAACCTATAT Tetraophasis_szechenyii TAGAAGGGGAAATTATGGGAAAAGACAAATGAGAAGAATTTAACCTGTAT Tragopan_temminckii TGGAAGGGGAAATTATGGAAAAAGACAAATGAGAAAAATTTAACCTGTAT Arborophila_ardens TAGAAGGGGAAATTACGGAAAAAGACAAATGAGAAGAATTGAACCTGTAT Arborophila_brunneopectus TAGAAGGGGAAATTATGGAAAAAGACAAATGAGAAGAATTGAACCTGTAT Gallus_gallus -----------------GAAAAAGACAAATGAGAAGAAGTGAACCTATAT Anas_platyrhynchos -------------------ACCAGTAATACTATTAGGACTGGTTCC---T Arborophila_rufipectus TTCTTGGGCTTCGATTATATTTCTGATTTGCTTTAATGCAAATATAAAGT Chrysolophus_amherstiae TTCTTGGGCTTCGATTATATTTCTGATTTGCTTTAATGCAAATACAAAAT Lophophorus_lhuysii TTCTTGGGCTTTGATTATATTTTTGATTTGATTTAATGCAAATACAGAAT Meleagris_gallopavo TTCTTGGGCTTCGACTATATTTCTGATTTGCTATAATGCAAATACAAAAT Phasianus_colchicus TTCTTAGGCTTCGATTATATTTCTGATTTGCTTTAATGCAAATACAAAAT Pucrasia_macrolopha TTCTTGGGCTTTGATTATATTTCTGATTTTCTTTAATGCAAATAAAAAAT Syrmaticus_reevesii TTCTTGGGCTTCGATTGTATTTCTGATTTGCTTTAATGCAAATACAAAAT Tetraophasis_szechenyii TTCTTGGTCATTGATTATATTTTTTATTTGCTTTAATGCAAATACAGAAT Tragopan_temminckii TTCTTGGGCTTCGATTATATTTCTAATTTGCTTTAATGCAAATACAAAAT Arborophila_ardens TTCTTGGGCTTTGATTATATTTCTGATTTGCTTTAATGCAAATATAAAGT Arborophila_brunneopectus TTCTTGGGCTTCGATTATATTTCTGATTTGCTTTAATGCAAATATAAAGT Gallus_gallus TTCTTGGGCTTCGATTATATTTCTGATTTGTTTTAATGCAAATACAAATT Anas_platyrhynchos TTCTTGGGCTTCGACTGTATTTCTGATTTGCTCCAACGCAAATATACGAT Arborophila_rufipectus TTTACTTACATCAAGGAGAAAGAGTCTGCAGATTTTAATTTCAAATATTA Chrysolophus_amherstiae TTTACTTATATCAAAGAG------TCTGCAGATTTTAATTTCAAATATTA Lophophorus_lhuysii TTTACTTATATCAAAGAGAAAGGGTCTGCAGATTTTAATTTCAAATATTA Meleagris_gallopavo TTTACTTATATCAAAGAGAAAGAGTCTGCAGATTTTAATTTCAAATATTA Phasianus_colchicus TTTACTTATATCAAAGAGAAAGAGTCTGCAGATTTTAATTTCAAATATTA Pucrasia_macrolopha GTTATTTATATCGAAGAGAAAGAGTCTGCAAATTTTAATTTCAAATATTA Syrmaticus_reevesii TTTACACATATCAAAGAGAAAGAGTCTGCAGATTTTAATTTCAAATATTA Tetraophasis_szechenyii TTTACTTATATCAAAGAGAAAGGGTCTGCAGATTTTAATTTCAAATATTA Tragopan_temminckii TTTACTTATATCAAAGAG------TTGGCAGATTTTAATTTCAAATATTA Arborophila_ardens TTTACTTACATCAAGGAGAAAGAGTCTGCGGATTTTAATTTCAAATATTA Arborophila_brunneopectus TTTACTTACATCAAGGAGAAAGAGTCTGCAGATTTTAATTTCAAATATTA Gallus_gallus TTTACTCAAATCAAGGAGAAAGAGTCTGCAGATTTTAATTTCAAATATTA Anas_platyrhynchos TTGACTAACATCAAGG--------TCTGCAGACTTTAATTTCAAATATTA Arborophila_rufipectus AAATAACATTTGAAAATGGTGACCTTAAAAATACACATTTC--------- Chrysolophus_amherstiae AAATAACCTTTGAAAATGGTGACCTTAAAAATACACATTTCCCCGCTTTC Lophophorus_lhuysii AAATAACCTTTGAAAATGGTGACCTTAAAAATACACATTTCCCCGCTTTC Meleagris_gallopavo AAATAACCTTTGAAAATGGTGACCTTAAAAATACACATTTCCCCGCTTTC Phasianus_colchicus AAATAACCTTTGAAAATGGTGACCTTAAAAATACACATTTCCCCGCTTTC Pucrasia_macrolopha AAATAAGCTTTGAAAATGGTGACCTTAAAAATACACATTTCCCCGCTTTC Syrmaticus_reevesii AAATAACCTTTGAAAATGGTGACCTTAAAAATACACATTTCCCTGCTTTC Tetraophasis_szechenyii AAATAACCTTTGAAAATGGTGACCTTAAAAATACACATTTCCCCGCTTTC Tragopan_temminckii AAATAACCTTTGAAAATGGTGACCTTAAAAATACACATTTCCCCGTTTTC Arborophila_ardens AAATAACCTTTGAAAACGGTGACCTTAAAAATACACATTTC--------- Arborophila_brunneopectus AAATAACATTTGAAAAAGGTGACCTTAAAAATACACATTTC--------- Gallus_gallus AAATAACCTTTGAAAATTGTGACCTTAAAAATGCACATTTCCCTGCTTTC Anas_platyrhynchos AAATAAATTTGAAAATTAGTGACCTTAAAAATACACATTTCCCTGCTTTC Arborophila_rufipectus AGGAATTTTCCAAATAATCCTAAACAGAAGGTACACCATGACAGACAGTC Chrysolophus_amherstiae AGGAATTTTCCAAGTAACCCTAAACAGAAGGTACACCACGACACATAGTC Lophophorus_lhuysii AGGAGTTTTCCAAATAATCCTAAACAGAAGGTACACCACGACACATAGTC Meleagris_gallopavo AGGAATTTTCCAAATAATCCTAAACAGAAGGTACACCATGACACATAGTC Phasianus_colchicus AGGAATTTTCCAAATAATCCTAAACAGAAGGTACACCACGACACATAGTC Pucrasia_macrolopha AGGAATTTTCCAAATAATCCTAAACAGAAGGTACACCACGACACATAGTC Syrmaticus_reevesii AGGAATTTTCCAAATAATCCTAAACAGAAGGTACACCACGACACATAGTC Tetraophasis_szechenyii AGGAATTTTCCAAATAATCCTAAACAGAAGGTACACCACGACACATAGTC Tragopan_temminckii AGGAATTTTCCAAATAATCCTAAACAGAAGGTACACCATGACACATAGTC Arborophila_ardens AGGAATATTCCAAATAATCCTAAACAGAAGGTACACCATGACAGACAGTC Arborophila_brunneopectus AGGAATATTCCAAATAATCCTAAACAGAAGGTACACCATGACAGACAGTC Gallus_gallus AGGAATTTTCCAAATAATCCTAAACAGAAGGTACACCAGGACCCATAGTC Anas_platyrhynchos AGGAATTTTCCAGATAATGCTAAGCAGAAGGTATACTACAACATATAGTC Arborophila_rufipectus TTGAAGAAAATGGCATCTGACAGCTTCAAAAAAATTATGTAGGAGGGAAA Chrysolophus_amherstiae TTGAAGAAAATGGTATCTGACAGCTTCAAAAAAATTATGTAGGAGGAAAA Lophophorus_lhuysii TTGAAGAAAATGGTATCTGACAGCTTCAAAAAAATTATGTAGGAGGAAAA Meleagris_gallopavo TTGAAGAAAATGGTATCTGACAGCTTCAAAAAAATTATGTAGGAGGAAAA Phasianus_colchicus TTGAAGAAAATGGTATCTGACAGCTTCAAAAAAATTATGTAGGAGGAAAA Pucrasia_macrolopha TTGAAGAAAATGGTATCTGACAGCTTCAAAAAAATTATGTAGGAGGAAAA Syrmaticus_reevesii TTGAAGAAAATGGTATCTGACAGCTTCAAAAAAATTATGTAGGAGGAAAA Tetraophasis_szechenyii TTGAAGAAAATGGTATCTGACAGCTTCAAAAAAATTATGTAGGAGGAAAA Tragopan_temminckii TTGAAGAAAATGGTATCTGACAGCTTCAAAAAAATTATGTAGGAGGAAAA Arborophila_ardens TTGAAGAAAATGGCATCTGACAGCTTCAAAAAAATTATGTAGGAGGGAAA Arborophila_brunneopectus TTGAAGAAAATGGGATCTGACAGCTTCAAAAAAATTATGTAGGAGGAAAA Gallus_gallus TTGAAGAAAATGGTATCTGACAGCTTCAAAAAAATTATGTAGGAGGAAAA Anas_platyrhynchos TTGAAGAAAATGGCATCTGACAGCTTCAAAAAAATTGTGTAGGAGGAAAA Arborophila_rufipectus AATATATCACTTTAATTGTCAAAGCACTGCATGAGAGTGCTCGGTGTCAC Chrysolophus_amherstiae AATATATCATTTTAATTGTCAAAGCACTGCATGAGAGTGCTCGGTGTCAC Lophophorus_lhuysii AATATATCATTTTAATTGTCAAAGCACTGCATGAGAGTGCTCGGTGTCAC Meleagris_gallopavo AATATATCATTTTAATTGTCAAAGCACTGCATGAGAGTGCTCGGTGTCAC Phasianus_colchicus AATATATCATTTTAATTGTCAAAGCATTGCATGAGAG-GCTCGGTGTCAC Pucrasia_macrolopha AATATATCATTTTAATTGTCAAAGCACTGCATGAGAGTGCTCGGTGTCAC Syrmaticus_reevesii AATATATCATTTTAATTGTCAAAGCACTGCATGAGAG-GCTCGGTGTCAC Tetraophasis_szechenyii AATATATCATTTTAATTGTCAAAGCACTGCATGAGAGTGCTCGGTGTCAC Tragopan_temminckii AATATATCATTTTAATTGTCAAAGCACTGCATGAGAGTGCTCGGTGTCAC Arborophila_ardens AATATATCACTTTAATTGTCAAAGCACTGCATGAGAGTGCTCGGTGTCAA Arborophila_brunneopectus AATATATCACTTTAATTGTCAAAGCACTGCATGAGAGTGCTCGGTGTCAA Gallus_gallus TATATATCATTTTAATTGTCAAAGCACTGCATGAGAGTGCTCGGTGTCAC Anas_platyrhynchos AATATATCATTTTAATTGTCAAAGCACTGCATGAGAGTGCCAAGCGTCGT Arborophila_rufipectus GCAGACGGTTCAAATTAGATGGGGGGTGAAAATACAGGCGGGTTTATCAC Chrysolophus_amherstiae GCAAACGGTTTAAATTAGACGGGGG-TAAAAATACAGGCGGGTTTATCAC Lophophorus_lhuysii GCAGACGGTTTAAATTAGATGGGGG-TAAAAATACAGGCGGGTTTATCAC Meleagris_gallopavo GCAGACGGTTTAAATTAGATGGGGG-TAAAAATACAGGCGGGTTTATCAC Phasianus_colchicus GCAGACGGTTTAAATTAGACGGGGG-TAAAAATACAGGCGGGTTTATCAC Pucrasia_macrolopha GCAGACGGTTTAAAGTAGATGGGGG-TAAAAATACAGGCGGGTTTATCAC Syrmaticus_reevesii GCAGACGGTTTAAATTAGACGGGGG-TAAAAATACAGGCGGGTTTATCAC Tetraophasis_szechenyii GCAGACGGTTTAAATTAGACGGGGG-TAAAAATACAGGCGGGTTTATCAC Tragopan_temminckii GCAAACGGTTTAAATTAGACGGGGG-TAAAAATACAGGCGGGTTTATCAC Arborophila_ardens GCACACGGGTTAAATTAGATGGGGGGTGAAA-TACAGGCGGGTTTATCAT Arborophila_brunneopectus GCACACGGGTTAAATTAGATGGGGGGTGAAA-TACAGGCGGGTTTATCAT Gallus_gallus GCAGACGGTTTAAATTAGACGGGGG-TAAAAACACAGGCGGGTTTATCAC Anas_platyrhynchos GCAGACTGTTTAA-TTAGACGGGG--TAAAAATACACGCAAGTTTATCAC Arborophila_rufipectus TAGACACTGTAGCCTTTGGTACAGAGACACTGACCGCCTTCCCCAC---- Chrysolophus_amherstiae GAAACACCACAGCCTTTGATACAGAGACACCGACCGGTTTCCCCACGCAG Lophophorus_lhuysii GAAACACCACAG------ATACAGAGACACCGACCGGTTTCCCCACGCAG Meleagris_gallopavo GAAACACCACAGCCTTTGATACAGAGACACCGACCGGTCTCCCCACGCAG Phasianus_colchicus GAAACACCACAGCCTTTGATACAGAGACACCGACCGGTTTCCCCACGCAG Pucrasia_macrolopha GAAACACCACAACCTTTGATACAGAGACACCGACCGGTTTCCCCACGCAG Syrmaticus_reevesii GAAACACCACAGCCTTTGATACAGAGACACCGACCGGTTTCCCCACGCAG Tetraophasis_szechenyii GAAACACCACAGCCTTTGATACAGAGACACCGACCGGTTTCCCCACGCAG Tragopan_temminckii GAAACACCACAGCCTTTGATACAGAGACACCGACCGGTTTCCCCACGCAG Arborophila_ardens CAGACACTGCAGCCTTTGGTACAGAGACACTGACCACCTTCCCCAC---- Arborophila_brunneopectus CAGACACTGCAGCCTTTGGTACAGAGACACTGACCACCTTCCCCAC---- Gallus_gallus GAAGCACCACAACCTTTGGTACAC--ACACCGACCGCTTTCCCCACGCAG Anas_platyrhynchos GAAACACCGAGACCTTCGCCATGGAGACACCGGCAGCCTTCTCCACGGAG Arborophila_rufipectus -------TGCTGCTTGGTGATGACGGAGGCACCCAAGGAGCCACGAGCAC Chrysolophus_amherstiae CCCTCGCTGCCGCTCCGTGCCAGCGGAGGCACCCGAGGAGCCGTGAGCAC Lophophorus_lhuysii CCCTCA----------GTGCCAACGGAGGCACCCAGGGAGCCACGAGCAC Meleagris_gallopavo CCCTCGCTGCC----------AACGGAGGCACCCAAGGAGCCGTGAGCGC Phasianus_colchicus CCCTCGCTGCCGCTCCGTGCCAACGGAGGCACCCAAGGAGCCGTGAGCAC Pucrasia_macrolopha CCCTCGCTGCCGCTCGGTGCCAACGGAGGCACCCAAGGAGCCACGAGCAC Syrmaticus_reevesii CCCTCGCTGCCGCTCCGTGCCAACGGAGGCACCCAAGGAGCCGTGAGCAC Tetraophasis_szechenyii CCCTCGCTGCCGCTCCGTGCCAACGGAGGCACCCAAGGAGCCGTGAGCAC Tragopan_temminckii CCCTCGCTGCCGCTCCGTGCCAGCGGAGGCACCCGAGGAGCCGTGAGCAC Arborophila_ardens -------TGCTGCTTGGTGATGACGGAGGCACCCAAGGAGCCACAAGCAC Arborophila_brunneopectus -------TGCTGCTTGGTGATGACGGAGGCACCCAAGGAGCCACAAGCAC Gallus_gallus CCTTCGCTGCCGCTCGGTGATGACGGAGGCAGCCAAGGAGCCACGAGCAC Anas_platyrhynchos ACGCGCGCAGCTCCCGGTCACGGCGGAGGCAGCCGGGGCAACGCGAGCAC Arborophila_rufipectus AAGCAGCAGGGAAGAGCCACCCGGCAGCACCGGCTCTGCTGGGCACTCAG Chrysolophus_amherstiae AGCCAGCAGGGAAGGCCCGCCCGGTATCACCGGCTCTGCTGGGCACGAAG Lophophorus_lhuysii AGCCGCCAGGGAAGGCCCGCCCGGCATCACCGGCTCCGCTGGGCACGAAG Meleagris_gallopavo AGCCGGCAGGGAAGGTCTGCCCGGTACCACCGGCTCTGCTGGGCACGAAG Phasianus_colchicus AGCCAGCAGGGAAGGCCCGCCCGGTATCACCGGCTCTGCTGGGCACGAAG Pucrasia_macrolopha AGCCAGCAGGGAAGGCCCGCCCGGTATCACCGGCTCTGCTGGGCACGAAG Syrmaticus_reevesii AGCCAGCAGGGAAGGCCCGCCCGGTATCACCGGCTCTGCTGGGCACGAAG Tetraophasis_szechenyii AGCCAGCAGGGAAGGCCCGCCCGGTATCACCGGCTCTGCTGGGCACGAAG Tragopan_temminckii AGCCAGCAGGGAAGGCCCGCCCGGTATCACCGGCTCTGCTGGGCACGAAG Arborophila_ardens AAGCAGCAGGAAAGAGCCACCCGGCAGCACCGGCTCTGCTGGGCGCTCAG Arborophila_brunneopectus AAGCAGCAGGAAAGAGCCACCCGGCAGCACCGGCTCTGCTGGGCGCTCAG Gallus_gallus AGCCAGCAGGGAAGGCCTGCCCGGTACCACCGGCTGTGCCGGGCACGAAG Anas_platyrhynchos AGGCACCAGGGAAATGCTCCCAGGTATCGTTTACCCGGCCCCGCGCGAAG Arborophila_rufipectus CACC----AGCGCCTGTCGCTACTTGCTGCGTGACTACCGCCATTACATC Chrysolophus_amherstiae CAC-----AGTGCCTGTCGCTACTTGCTGTGTGACGACCGCCATTACATC Lophophorus_lhuysii CAGC----AGTGCCTGTCGCTACTTGCTGCGTGACGACCGCCATTACACC Meleagris_gallopavo CACC----GCTGCCTGTCGCTACTTGCTGCGTGACGGCCGCCATTACACC Phasianus_colchicus CACC----AGTGCCTGTCGCTACTTGCTGTGTGACGACCGCCATTACAGC Pucrasia_macrolopha CACC----AGTGCCTGTCGCTACTTGCTGCGTGACGACCGCCATTACATC Syrmaticus_reevesii CACC----AGTGCCTGTCGCTACTTGCTGTGTGACGACCGCCATTACAGC Tetraophasis_szechenyii CACC----AGTGCCTGTCGCTACTTGCTGTGTGACGACCGCCATTACAGC Tragopan_temminckii CAC-----AGTGCCTGTCGCTACTTGCTGTGTGACGACCGCCATTACATC Arborophila_ardens CACC----AGCGCCTGTCGCTACTTGCTGCGTGACTACCGCCATTACATC Arborophila_brunneopectus CACC----AGCGCCTGTCGCTACTTGCTGCGTGACTACCGCCATTACATC Gallus_gallus CACGAGTGAGTGCCTGTCGCTACTTGCTGCGTGACCGCGGCCATCACATC Anas_platyrhynchos CGCC----AGTACCTGCCCCTACTTGCCGCGGGCCTCCCCGCGTGAAGCC Arborophila_rufipectus TCAGTGCCAGGGAGGAATTTCTACCCGGAACGCAGACGGCCGAGCCTGAA Chrysolophus_amherstiae TCCATGCCAGGGAGGAATTTCCACCCGGAACGCAGACGGCCGAGCCTGAA Lophophorus_lhuysii TCCATGCCAGGGAGGAATTTCCACCCGGAACGCAGACAGCCGAGCCTGAA Meleagris_gallopavo TCCATGCCAGGGAGGAATTTCCACCCGGAACGCAGACGGCCGAGCCTGAA Phasianus_colchicus TCCATGCCAGGGAGGAATTTCCACCCGGAACGCAGACGGCCGAGCCTGAA Pucrasia_macrolopha TCCATGCCAGGGAGGAATTTCCACCCGGAAAGCAGACAGCCGAGCCTGAA Syrmaticus_reevesii TCCATGCCAGGGAGGAATTTCCACCCGGAACGCAGACGGCCGAGCCTGAA Tetraophasis_szechenyii TCCATGCCAGGGAGGAATTTCCACCCGGAACGCAGACGGCCGAGCCTGAA Tragopan_temminckii TCCATGCCAGGGAGGAATTTCCACCCGGAACGCAGACGGCCGAGCCTGAA Arborophila_ardens TCAGTGCCAGGGAGGAATTTCCACCCGGAACGCAGACGGCCGAGCCTGAA Arborophila_brunneopectus TCAGTGCCAGGGAGGAATTTCCACCCGGAACGCAGACGGCCGAGCCTGAA Gallus_gallus TCAGTGCCAGGCAGGAATTTCCACCCGGAACGCAGACGGCCGAGCCTGAA Anas_platyrhynchos TTCACGGCAGGGCAGGGTTGCGGTGCG-AGCGCAGACTGCCGAGCCGGAA Arborophila_rufipectus ATTCAGGTAGTGCTACCAGGCGACGGGAGCAGAAATCTGCTGCTGGTTGG Chrysolophus_amherstiae ATTCAGGTACTGCTAGCAGGCCAGGAGAGCAGAAATCTGCTGCTTGTTCG Lophophorus_lhuysii ATTCAGGTACTGCTAGCAGGCCAGCAGAGCAGAAATCTGCTGCTTGTTCG Meleagris_gallopavo ATTCAGGTACTGCCAGCAGGCCAGGAGAGCAGAAATCTGCTGCTTGTTTG Phasianus_colchicus ATTCAGGTACTGCTAGCAGGCCAGGAGAGCAGAAATCTGCTGCTTGTTTG Pucrasia_macrolopha ATTCAGGTACTGCCAGCAGGCCAGGAGAGCAGAAATCTGCTGCTTGTTCG Syrmaticus_reevesii ATTCAGGTACTGCTAGCAGGCCAGGAGAGCAGAAATCTGCTGCTTGTTTG Tetraophasis_szechenyii ATTCAGGTACTGCTAGCAGGCCAGGAGAGCAGAAATCTGCTGCTTGTTTG Tragopan_temminckii ATTCAGGTACTGCTAGCAGGCCAGGAGAGCAGAAATCTGCTGCTTGTTCG Arborophila_ardens ATTCAGGTAGTGCTACCAGGCGAGGGGAGCAGAAATCTGCTGCTGGTTGG Arborophila_brunneopectus ATTCAGGTAGTGCTACCAGGCGAGGGGAGCAGAAATCTGCTGCTGGTTGG Gallus_gallus ATTCAGGTACTGCTACCAGGTGAGGAGAGCAGAAATCTGCTGCTTGCTCG Anas_platyrhynchos ATTCAGGTACTGATGTGGGGCCAGCCTCGCAGAAAGCTGCCACTCGTTAA Arborophila_rufipectus CTCCATGCAATGCAATTAAGCAGCTCTGGTTGCATGAATCTCCTTTCCAT Chrysolophus_amherstiae CCCCGTGCAATGCAATTAAGCAGCTCTGGTTGCATGAATCTCCTTTCTGT Lophophorus_lhuysii CCCTGTGCAATGCAATTAAGCAGCTCTGGTTGCATGAATCTCCTTTCTGT Meleagris_gallopavo CCCTGTGCAATGCAATTAAGCAGCTCTGCTTGCACGAATCTCCTTTCTGT Phasianus_colchicus CCCTGTGCAATGCAATTAAGCAGCTCTGGTTGCATGAATCTCCCTTCTGT Pucrasia_macrolopha CTCTGTGCAATGCAATTAAGCAGCTCTGGTTGCATGAATCTCCCTTCCGT Syrmaticus_reevesii CCCTGTGCAATGCAATTAAGCAGCTCTGGTTGCATGAATCTCCCTTCTGT Tetraophasis_szechenyii CCCTGTGCAATGCAATTAAGCAGCTCTGGTTGCATGAATCTCCCTTCTGT Tragopan_temminckii CCCCGTGCAATGCAATTAAGCAGCTCTGGTTGCATGAATCTCCTTTCTGT Arborophila_ardens CTCCGTGCAACGCAATTAAGCAGCTCTGGTTGCATGAATCTCCTTTCCAT Arborophila_brunneopectus CTCCGTGCAACGCAATTAAGCAGCTCTGGTTGCATGAATCTCCTTTCCAT Gallus_gallus CCCTGTGCAATGCAATTCGGCAGCTCTGGTCGCATGAATCTCCTTTCCGT Anas_platyrhynchos TTTCATGAAACATAATTAAGCAGCTCTGGTCCTGCCAACCGCCTGCCTCT Arborophila_rufipectus GCTGCAGGAACTC-CCAGCATGTAACAAGAAGCCTCCAGCTCCAGC---- Chrysolophus_amherstiae GCAGCAGCAAC----------GTAACAAGAAGTCCCCAGCTACAGCTCCA Lophophorus_lhuysii GCAGCAGCAGATCTCCGGCACGTAACAAGAAGTCCCCAGCTCCAGCTCCA Meleagris_gallopavo GCAGCAGCTACTCTCCAGCACGTAACAAGAGGTCCCCAGCTACAGCTCCA Phasianus_colchicus GCAGCAGCAACTCTCCAGCACGTAATGAGAAGTCCCCAGCTACAGCTCCA Pucrasia_macrolopha GCAGCAGGAACTCTCCAGCACGTAACAAGAAGTCCCCAGCTACAGCTGCA Syrmaticus_reevesii GCAGCAGCAACTCTCCAGCACGTAATGAGAAGTCCCCAGCTACAGCTCCA Tetraophasis_szechenyii GCAGCAGCAACTCTCCAGCACGTAATGAGAAGTCCCCAGCTACAGCTCCA Tragopan_temminckii GCAGCAGCAAC----------GTAACAAGAAGTCCCCAGCTACAGCTCCA Arborophila_ardens GCAGCAGGAACTC-CCAGCATGTAACAAGAAGCCTCCAGCTCCAGC---- Arborophila_brunneopectus GCAGCAGGAACTC-CCAGCATGTAACAAGAAGCCTCCAGCTCCAGC---- Gallus_gallus GCAGCAGCAACTCTCCAGCACATAACAAGAAGTCCCCAGCTACAGCTCCA Anas_platyrhynchos CCTGCAGGAGGAGTTGAGCGAGCCACCACGAGGCC---GGCCCAGCCGCC Arborophila_rufipectus --CTGCACCAGGCAGATCCATAGACTGGCCTGGGTTGAAAAGGCGCACAA Chrysolophus_amherstiae GCCCACACCAGG---ATTCATAGAATGGTCTGGATTGAAAAGGAGCACAA Lophophorus_lhuysii GCCCGCACCAGGCAGATTCATAGAATGGTCTGGGTTGCAAAGGAGCACAA Meleagris_gallopavo GCCTGCAGCAGGCAGATTCACAGAATGGCCTGGGTTGCAAAGGAGCACAG Phasianus_colchicus GCCCACACCAGG---ATTCATAGAATGGTCTGGGTTGAAAAGGACCACAG Pucrasia_macrolopha GCCTGCACCAGGCAGGTTCACAGAATGGCCTGGGTTGAAAAGGACCACAA Syrmaticus_reevesii GCCCACACCAGG---ATTCATAGAACGGTCTGAATTGAAAAGGACCACAA Tetraophasis_szechenyii GCCCACACCAG---GATTCATAGAACGGTCTGAATTGAAAAGGACCACAA Tragopan_temminckii GCCCACACCAGG---ATTCATAGAATGGTCTGGATTGAAAAGGAGCACAA Arborophila_ardens --CTGCACCAGGCAGATCCATAGAATGGCCTGGGTTGAAAAGGCACACAA Arborophila_brunneopectus --CTGCACCAGGCAGATCCATAGAATGGCCTGGGTTGAAAAGGCACACAA Gallus_gallus ---CGCAC------------------------------------------ Anas_platyrhynchos ACTCACGCC---------------------------------GCCCCCGA Arborophila_rufipectus TGCTCATGTAGGTTCCACCCCCCTGCTATGTGCAGGGTCACCAACCAGCA Chrysolophus_amherstiae TGCTCATCCAG-TTCCAACCCCCTGCTGTGTGCAGGGTCACCAACCAGCA Lophophorus_lhuysii TGCTCATCGAG-TTCCAACCCCCTGCTGTGTGCAGGGTCACCAACCAGCA Meleagris_gallopavo CGCTCATCCAG-TTTCAACCCCCTGCTACGTGCAGG-TCGCCAACCAGCA Phasianus_colchicus TGCTCATCCAG-TTCCAAACCCCTGCTATGTGCAAG-TCGCCAACCAGCA Pucrasia_macrolopha TGCTCATCCAG-TTCCAACCCCCTGCTATGTGCAGGGTCGCCAACCAGCA Syrmaticus_reevesii TGCTCACCCAG-TTCCAACCCCCTCCTACGTGCAGGGTCGCCAACCAGCA Tetraophasis_szechenyii TGCTCACCCAG-TTCCAACCCCCTCCTACGTGCAGGGTCGCCAACCAGCA Tragopan_temminckii TGCTCATCCAG-TTCCAACCCCCTGCTGTGTGCAGGGTCACCAACCAGCA Arborophila_ardens TGCTCATGTAG-TTCCACCCCCCTGCTATGCGCAGGGTCACCAACCAGCA Arborophila_brunneopectus TGCTCATGTAG-TTCCACCCCCCTGCTATGCGCAGGGTCACCAACCAGCA Gallus_gallus -------------------------------------------------- Anas_platyrhynchos CGTTTCCCCCA--------------------------------------- Arborophila_rufipectus GCCCAGGCTGCCCAGAGCCACATCCACCCTGGC-------CTTGAATGCC Chrysolophus_amherstiae GACCAGGCTGCCCAGAGCCACATCCAGCCTGGC-------CTTGAATGCC Lophophorus_lhuysii GACCAGGCTGCCCAGAGCCACATCCAGCCTGGC-------CCTGAACACC Meleagris_gallopavo GCCCAGGCTGCCCAGAGCAACATCCAGCCTGGC-------CTCGAATGCC Phasianus_colchicus GACCAGGCTGCCCAGAGCCACATCCAGCCTAGT-------CTTGAATGCC Pucrasia_macrolopha GACCAGGCTGCCCAGAGCCACATCCAGCCTGGC-------CTTGAATGCC Syrmaticus_reevesii AACCAGGCTGCCCAGAGCCACAGCCAGCCTAGTGCCTAGTCTTGAATGCC Tetraophasis_szechenyii AACCAGGCTGCCCAGAGCCACAGCCAGCCTAGTGCCTAGTCTTGAATGCC Tragopan_temminckii GACCAGGCTGCCCAGAGCCACATCCAGCCTGGC-------CTTGAATGCC Arborophila_ardens GCCCAGGCTGCCCAGAGCCACATCCAGCCTAAC-------CTCAAATGCC Arborophila_brunneopectus GCCCAGGCTGCCCAGAGCCACATCCAGCCTAAC-------CTCAAATGCC Gallus_gallus -------------------------------GT----------------- Anas_platyrhynchos ----AGGCCGCTGAGGGCAGCA--------GGC----------------- Arborophila_rufipectus TGCAGGGATGGGGCATCCACAGCCTCCTTGGGCAGCCTGCCCCCAAACAA Chrysolophus_amherstiae TGCAGGGATGGGGCATCCACAGCCTCCTTGGGCAGACTGCCCCCAAACAA Lophophorus_lhuysii TTCAGGGATGGAGCATCCACAACCTCTTAGGGCAGACCGCCCCCAAACAA Meleagris_gallopavo TCCAGGGATGGGGCATC-ACAACCTCTATGG-CAGACTGTCCCCAGACAA Phasianus_colchicus TCCAGGGACGGGGCATCCACAGCCTCCTTAGGCAGACTGCCCCCAAACAA Pucrasia_macrolopha TCCAGGGATGGGGCATCCACAACCTCCTTGGGCAGACTGCCCCCACACAA Syrmaticus_reevesii TCCAGGGACGGGGCATCCACAGCCTCCTTGGGCAGACTGCCCCCAAACAA Tetraophasis_szechenyii TCCAGGGACGGGGCATCCACAGCCTCCTTGGGCAGACTGCCCCCAAACAA Tragopan_temminckii TGCAGGGATGGGGCATCCACAGCCTCCTTGGGCAGACTGCCCCCAAACAA Arborophila_ardens TGCAGAGATGGGGCATCCACAGCCTCCTTGGGCAGCCTGCCCCCAAACAA Arborophila_brunneopectus TGCAGAGATGGGGCATCCACAGCCTCCTTGGGCAGCCTGCCCCCAAACAA Gallus_gallus -------------------------------------TGCCCCCCAACAA Anas_platyrhynchos ---------------------GCCCTTTCGAA----------ATAAATAC Arborophila_rufipectus TGCCATGTGCGCAGCATGGGACACC-AGGCACTGCTTCCCAACACGGCAG Chrysolophus_amherstiae CACCATGTGCACGGCACAGGACACCCAGGCGCTATTTCCCAACACCACAG Lophophorus_lhuysii CACCATGTGCTCGGCACAGGACACCCAGGCACTATTTCCCAACACCACAG Meleagris_gallopavo CACCATGTGCACAGCACAGGACACCCAGGCACTATTTCCCAACTGCACAA Phasianus_colchicus CACCATGTGCACGGCACAGGACACCCAGGCACTATTTCCCAACACCACAG Pucrasia_macrolopha CACCACGCGCACGGCACAGGACACCCAGGCACTATTCCCCAACACCGCAG Syrmaticus_reevesii CACCATGTGCACAGCACAGGACACCCAGGCACTATTTCCCAACACCACAG Tetraophasis_szechenyii CACCATGTGCACAGCACAGGACACCCAGGCACTATTTCCCAACACCACAG Tragopan_temminckii CACCATGTGCACGGCACAGGACACCCAGGCGCTATTTCCCAACACCACAG Arborophila_ardens TGCCATGTGCACAGCGTGGGACACC-AGGCACTGCTTCCCAAAACGGCAG Arborophila_brunneopectus TGCCATGTGCACAGCGTGGGACACC-AGGCACTGCTTCCCAAAACGGCAG Gallus_gallus C-CCATGTGCACGGCGCAGGACACCCAGGCACTATTCCCCAACACCGCAG Anas_platyrhynchos CGCCATTTCCTC----CCGGAGACTCAG-TGCTCTTCCTCCTCCTC---- Arborophila_rufipectus CTGCAAGCCTTTCCTCACCGCCAGCACAGTGAGCACACAGGCCCAAACCC Chrysolophus_amherstiae CTGAAAGCCCTTCCTCACTGCCAGCACAGTGACCACACAGGCCCAAACCC Lophophorus_lhuysii CTGAAAGCCCTTCCTCGCTGCCAGCACAGTGACCACGCAGGCCCAAACCC Meleagris_gallopavo CTGAAAGTCCTTCCTCACTGCCAGCACAGTGACCACACAGGCCCAAACCC Phasianus_colchicus CTGAAAGCCCTTCCTCACTGCCAGCACAGTGACCACACAGGCCTGAACCC Pucrasia_macrolopha CTGAAAGCCCTTCCTCTCTGCCAGCACAGTGACCACACAGGCCCAAACCC Syrmaticus_reevesii CTGAAAGCCATTCCTCACTGCCAGCACAGTGACCACACAGGCCCAAACCC Tetraophasis_szechenyii CTGAAAGCCATTCCTCACTGCCAGCACAGTGACCACACAGGCCCAAACCC Tragopan_temminckii CTGAAAGCCCTTCCTCACTGCCAGCACAGTGACCACACAGGCCCAAACCC Arborophila_ardens CTGCAAGCCTTTCCTCACCGCCAGCACAGTGAACACACAGGCCCAAACCC Arborophila_brunneopectus CTGCAAGCCTTTCCTCACCGCCAGCACAGTGAACACACAGGCCCAAACCC Gallus_gallus CTGAAAGCCCTCCCTCACTGCCAGTACAGTGAGCACACGGGCCCAAACCC Anas_platyrhynchos -------CTCTTACTCACAGCGAGGATCCGCACCAT---GGCGTGAGACC Arborophila_rufipectus AACAGAGTCCAGCACAACAGCAGGGGGGTCCCCAGGCAGCACTGCCCTGG Chrysolophus_amherstiae AACCAAGCCCAGCACAACACCACGGG--TCTCCAGG--------TCCTGG Lophophorus_lhuysii AATCAAGCCCAGCACAACAACACAGGA-TCCCCAGGCAGTGGTGTCCTGG Meleagris_gallopavo AACCAAGCCCAGCACAACACCACGGGA-TCCCCAGGCAGTGCTGTCCTGG Phasianus_colchicus AACCAAGCCCAGCACAACACCACGGGG-TCTCCAGG--------TCCTGG Pucrasia_macrolopha AACCGAGCTCAGCACAACACCACGGGG-TCCCCAGGCAGTGCTGTCCTGG Syrmaticus_reevesii AACCAAGCCCAGCACAACACCACGGGG-TCCCCAGA--------TCCTGG Tetraophasis_szechenyii AACCAAGCCCAGCACAACACCACGGGG-TCCCCAGA--------TCCTGG Tragopan_temminckii AACCAAGCCCAGCACAACACCACGGG--TCTCCAGG--------TCCTGG Arborophila_ardens AACAGAGTCCAGCACAACAGCAGGGGGGTCCCCAGGCAGCGCTGCCCTGG Arborophila_brunneopectus AACAGAGTCCAGCACAACAGCAGGGGGGTCCCCAGGCAGCGCTGCCCTGG Gallus_gallus AACCGAACCCA--------CCACGGGG-TCCCCAGGCAGTGCTGTCCTGG Anas_platyrhynchos CCAGGAAGCAGCCACCCTGCTCCCG---TCCCCTCG--------CCCGAG Arborophila_rufipectus AGAACT--TCATTGCAGAACATTGCCCTCTTTTAATGGGCAAAAAAAGGG Chrysolophus_amherstiae AGGACT--TCATTACAGAACATCACCCTCCTTTAATGTTAAAAAAAAGGA Lophophorus_lhuysii ACAACT--TCATTGTTGAACACTGCCCTCCTTTAACGTTAAAAAAAAGGG Meleagris_gallopavo AGAACT--TCATTACAGAACCT-GTCCTCTTTTAATGTTAAAAAA--GGG Phasianus_colchicus AAAACT--TCATTACAGAACATCACCCTCCTTTAATGTTAAAAAAAAGGG Pucrasia_macrolopha AGAACT--TCATTACAGAACATCGCCCTCCTTTAATGTTAAAAAACAGGG Syrmaticus_reevesii AGAACT--TCATTACAGAACATCACCCTCCTTTAATGTTAAAAAAAAGGG Tetraophasis_szechenyii AGAACT--TCATTACAGAACATCACCCTCCTTTAATGTTAAAAAAAAGGG Tragopan_temminckii AGGACT--TCATTACAGAACATCACCCTCCTTTAATGTTAAAAAAAAGGA Arborophila_ardens AGAACT--TCATTGCAGAACGTTGCCCTCTTTTAATGGGCAAAAAAAGG- Arborophila_brunneopectus AGAACT--TCATTGCAGAACGTTGCCCTCTTTTAATGGGCAAAAAAAGGG Gallus_gallus AGAACT--TCATTGCAGAACACTGCCCTCCTTCAATGTTAAAAAAAAGGG Anas_platyrhynchos CCACCTCCTCATTACAGGGCAGGGCTTTCCCCTAACGTCCCAAAAAAGAG Arborophila_rufipectus GGTAAAAGCAATGGTAACGCTTCCAACATCCATCCAAAAGCCACAACATA Chrysolophus_amherstiae GGTAAGAACAATGGTAACGCTTCCAACGTATGTCCAAAAGCCACAACATA Lophophorus_lhuysii GGTGAAAACAATGGTAACGCTTCCAACCTATGTCCAAAAGCCACAACATA Meleagris_gallopavo GGTAAAAACAATGGTAACGCTTCCAACGTATGTCCAAAAGCCACAACATA Phasianus_colchicus GGTAAAAACAATGGTAACGCTTCCAACGTACGTCCAAAAGCCACAACATA Pucrasia_macrolopha GGTAGAAACAATGGTAACGCATCCAACGTATGTCCAAAAGCCACAACATA Syrmaticus_reevesii GGTAAAAACAATGGTAACGCTTCCAACGTATGTCCAAAGGCCACAACATA Tetraophasis_szechenyii GGTAAAAACAATGGTAACGCTTCCAACGTATGTCCAAAGGCCACAACATA Tragopan_temminckii GGTAAGAACAATGGTAACGCTTCCAACGTATGTCCAAAAGCCACAACATA Arborophila_ardens -------------------------------------------------- Arborophila_brunneopectus GGTAAAAGCAATGGAAACGCTTCCAACATCCATCCAAAAGCCAAAACATA Gallus_gallus GGTAAAGACAATGGTAACGCTTCCAACACTTGTCCAAAAGCCACAACATA Anas_platyrhynchos GGTGAAAA-ACTGGTAGTGCTTCAAACATGTGTCCGAAAGCCACAACACC Arborophila_rufipectus GAGGCAAAGGTGCTGTTTGAAACATCACCTTGCTGGCAAAAAGCAACGTA Chrysolophus_amherstiae AAGACCAAGGTGCTGTTTGAAACATCACCTTGCTGGCAAAAAGCAACGTA Lophophorus_lhuysii AAGACCAAGGTGCTGTTTGAAACATCACCTTGCTGGCAAAAAGCAACGTA Meleagris_gallopavo AAGACCAAGGTGCTGTTTGAAACATCACCTTGCTGGCAAAAAGCAACGTA Phasianus_colchicus AAGACCAAGGTGCTGTTTGAAACATCACCTTGCTGGCAAAAAGCAACGTA Pucrasia_macrolopha AAGACCAAGGTGCTGTTTGAAACATCACCTTGCTGGCAAAAAGCAACGTA Syrmaticus_reevesii AAGACCAAGGTGCTGTTTGAAACATCACCTTGCTGGCAAAAAGCAACGTA Tetraophasis_szechenyii AAGACCAAGGTGCTGTTTGAAACATCACCTTGCTGGCAAAAAGCAACGTA Tragopan_temminckii AAGACCAAGGTGCTGTTTGAAACATCACCTCACTGGCAAAAAGCAACGTA Arborophila_ardens ----------TGCTGTTTGAAACATCACCTTCTTGACAAAAAGCAACGTC Arborophila_brunneopectus GAGACAAAGGTGCTGTTTGAAACATCACCTTCTTGACAAAAAGCAACGTC Gallus_gallus CAGACAAAGGTGCTGTTTGAAACATCACCTTTCTGGCAAAAAGCACTGTG Anas_platyrhynchos CAGACAAAGGTGCTGTTTGAAACATCACCTTTTTGGCAAAAAGCGATATA Arborophila_rufipectus ATTACGACCGTATCCACAGCGTGGTTAAAAGTGGGGGTTGGAGATTCACG Chrysolophus_amherstiae ATTACGGCCATATCCACAACGTGGTTAAAAGTGGGGGTTGGAGGTTCGTG Lophophorus_lhuysii ATTACGGCCATATCCACAACGTGGTTAAAAGTGGGGGTTGGAGGTTCGTG Meleagris_gallopavo ATTACGGCCGTATCCACAACGTGGTTACAAGTGGGGGTTGGAGGTTCATG Phasianus_colchicus ATTACGACCGTATCCACAGCGTGGTTAAAAGTGGGGGTTGGAGATTCACG Pucrasia_macrolopha ATTACGGCTGTATCCACAACGTGGTTAAAAGTTGGGGGTGGAGGTTCGTG Syrmaticus_reevesii ATTACGGCTGTATCCACAACGTGGTTAAAAGTTGGGGGTGGAGGTTCGTG Tetraophasis_szechenyii ATTACGACCGTATCCACAGCGTGGTTAAAAGTGGGGGTTGGAGATTCACG Tragopan_temminckii ATTACGGCCGTATCCACAACGCGGTTAGAAGCGGGGGTTGGAGGTTCGTG Arborophila_ardens ACTACAAC------------GCAGTTAAAAGCGGA--------------- Arborophila_brunneopectus ACTACAAC------------GCAGTTAAAAGCGGA--------------- Gallus_gallus ATTACGGCCGTATCCACAACATGGTTAAAAC------------------- Anas_platyrhynchos ATTATGGCTGCATCCATAACTTAATTAAAAGGGAA--------------- Arborophila_rufipectus ATCCCTGAGGTCCCTTCCAACCCTGGCCATCCTGTGATTCTGTGTGAAAA Chrysolophus_amherstiae ATCCTTGAGGTCTCCTCCAACCCTGGCCATTCTGTGA--------GAAAA Lophophorus_lhuysii ATCCTTGAGGTCTCCTCCAACCCTGGCCATTCTGTGA--------GAAAA Meleagris_gallopavo ATCCTTGAGGTCCCTTCCAACCCTGGCCATTCTGTGATTCTGTGTGAA-- Phasianus_colchicus ATCCTTGAGGTCCCTTCCAACCCTGGCCATCCTGTGATTCTGTGTGAAAA Pucrasia_macrolopha ATCCTTGAGATCCCTTCCGACCCTGGCAATTCTGTGATTCTGTGTGAAAA Syrmaticus_reevesii ATCCTTGAGATCCCTTCCGACCCTGGCAATTCTGTGATTCTGTGTGAAAA Tetraophasis_szechenyii ATCCTTGAGGTCCCTTCCAACCCTGGCCATCCTGTGATTCTGTGTGAAAA Tragopan_temminckii ATCCTTGAGGTCCCTTCCGACCCTGGCCATTCTGTGATTCTGTGTGAAAA Arborophila_ardens -------------------------------------------------- Arborophila_brunneopectus -------------------------------------------------- Gallus_gallus ----------------------------------TGA------------- Anas_platyrhynchos -------------------------------------------------- Arborophila_rufipectus GTGAGAAAACCAAAACACGATCACAGCTG-CAGCGAACGCAGCCGTGCGG Chrysolophus_amherstiae GTGAGAAAACCAAAACATGATCACAACTG-CAGCAAACGCAGCCGTGCGG Lophophorus_lhuysii GTGAGAAAACCAAAACATGATCACAACTG-CAGCAAACGCAGCCGTGCGG Meleagris_gallopavo GTGAGGAAACCAAAACACGATCACAACTG-CAGCGAACGCAGCCGTGCGG Phasianus_colchicus GTGAGAAAACCAAAACACGATCACAACTG-CAGCGAACGCAGCCGTGCGG Pucrasia_macrolopha GTGAGAAAACCAAAACACCATCACAACTG-CAGCGAACGCAGCCGTGCGG Syrmaticus_reevesii GTGAGAAAACCAAAACACCATCACAACTG-CAGCGAACGCAGCCGTGCGG Tetraophasis_szechenyii GTGAGAAAACCAAAACACGATCACAACTG-CAGCGAACGCAGCCGTGCGG Tragopan_temminckii GTGAGAAAACCAAAACACGATCGCAACTG-CAGCGAACGCAGCCGTGCGG Arborophila_ardens -----AAAGCCAAAACACGATCACAACTGTCAGTGAACGCAGCCATGCGG Arborophila_brunneopectus -----AAAGCCAAAACACGATCACAACTGTCAGTGAACGCAGCCATGCGG Gallus_gallus ----GAAAGCCAAAACACGATCACAACTG-CAGCGAACGCAGCCGTGTGG Anas_platyrhynchos -----AAAGCTGAAAGACAATCAAAATTG-CAGCAATCGTAGCTGTACTA Arborophila_rufipectus GCGAAAATCTGCTTTTATAACATGGAGCTGAAGGTGTTTGTTAAGACCCA Chrysolophus_amherstiae GTGAAAATCTGCTTTTATAACGTGGAGCTGAAGGTGTTTGTTAAGACCCA Lophophorus_lhuysii GTGAAAATCTGCTTTTATAACGTGGAGCTGAAGGTGTTTGTTAAGACCCA Meleagris_gallopavo GCGAAAATCTGCTTTTATAACGTGAAGCTGAAGGTGTTTGTTAAGACCCA Phasianus_colchicus GCGAAAATCTGCTTTTATAACATGGAGCTGAAGGTGTTTGTTAAGACCCA Pucrasia_macrolopha GCGAAAATCTGCTTTTATAACGTGGAGCTGAAGGTGTTTGTTAAGACCCA Syrmaticus_reevesii GCGAAAATCTGCTTTTATAACGTGGAGCTGAAGGTGTTTGTTAAGACCCA Tetraophasis_szechenyii GCGAAAATCTGCTTTTATAACATGGAGCTGAAGGTGTTTGTTAAGACCCA Tragopan_temminckii GCGAAAATCTGCTTTTATAACGTGGAGCTGAAGGTGTTTGTTAAGACCCA Arborophila_ardens ACAAAAACCTGATTTTATAACGTG------AAGGTGTTTGTTAAGACCC- Arborophila_brunneopectus ACAAAAACCTGATTTTATAACGTG------AAGGTGTTTGTTAAGACCC- Gallus_gallus GCGAAAATCTGATTTAATAACGTGGAGCTGAAGGTGTTTGTTAAGACCCA Anas_platyrhynchos ATGAAAATCTTATTTTATAAAGTGGATCTGAAGGTGTTTGTTAAGACCCA Arborophila_rufipectus TGTGTTCAGGAACAATTCATGTGGGAGGACTGTAATGTGCACTATCAGTA Chrysolophus_amherstiae TGCGTTCAGGAACAATTCATGTGGGAGGACTGTAACGTGCACTGTCAGTA Lophophorus_lhuysii TGCGTTCAGGAACAATTCATGTGGGAGGACTGTAACGTGCACTGTCAGTA Meleagris_gallopavo TGTGTTCAGGAACAATTCATGTGGGAGGAGTGTAACGTGCACTGTCAATA Phasianus_colchicus TGCCTTCAGGAACAATCCATGTGGGAGGACTGTAACGTGCACTGTCAGTA Pucrasia_macrolopha TGCGTTCAGGAACAATTCATGTGGGAGGACTGTAACGTGCACTGTCAGTA Syrmaticus_reevesii TGCGTTCAGGAACAATTCATGTGGGAGGACTGTAACGTGCACTGTCAGTA Tetraophasis_szechenyii TGCGTTCAGGAACAGTTCATGTGGGAGGACTGTAACGTGCACTGTCAGTA Tragopan_temminckii TTCATTCACAAACAATTTGGGAGGGAGGTAAGTAACGTGGTCAGGCAGGA Arborophila_ardens TGTGTTCAGGAACAATTCATGTGGGAGGACTGTAATGTGCACTATCAGTA Arborophila_brunneopectus TGTGTTCAGGAACAATTCATGTGGGAGGACTGTAATGTGCACTATCAGTA Gallus_gallus TGCATTCAGGAACAATTCATGCGGGAGGACTGTAACGTGCACTATCAGTA Anas_platyrhynchos TGCGTTCAGGAACAATCTGTGTGGGAGGACTGTAATGTGCACCGTCAGTA Arborophila_rufipectus TATTGCTATGTCCTTTCGAATGCTAGCAATGAAATGGATACTAAAATAAC Chrysolophus_amherstiae TATTGTTATGGCCTTCTGAATGCTAGCAATGAAATGGATACTAAAATAAC Lophophorus_lhuysii TATTGTTATGTCCTTCTGAATGCTAGCAATGAAATGGATACTAAAATAAC Meleagris_gallopavo TATTGTTATGTCCTTCTGATTGCTAGCAATGAAATGGATACTAAAATAAC Phasianus_colchicus TATTGTTATGTCCTTCTGAATGCTAGCAGTGAAATGGATACTAAAATAAC Pucrasia_macrolopha TATTGTTATGTCCTTCTGAATGCTAGCAATGAAATGGATACTAACATAAC Syrmaticus_reevesii TATTGTTATGTCCTTCTGAATGCTAGCAATGAAATGGATACTAAAACAAC Tetraophasis_szechenyii TATTGTTATGTCCTTCTGAATGCTAGCAATGAAATGGATACTAAAATAAC Tragopan_temminckii TATAGGTCCTTCCTTATGAATGCAAGCAAAGAAATGGTTA----AATAAC Arborophila_ardens TATTGCTACGTCCTTTTGAATGCTAGCAATGAAATGGATTCTAAAATAAC Arborophila_brunneopectus TATTGCTACGTCCTTTTGAATGCTAGCAATGAAATGGATTCTAAAATAAC Gallus_gallus TATTGCTATGTCCTTTTGAATGCTAGCAATTAAATGGATACTAAAATAAC Anas_platyrhynchos TATGG-------CATTCGAATGCTAGCAATGAAATAGATACTAAAATAAC Arborophila_rufipectus ATTAATGCAAAAACAAATGCAGAAACATGTTTACATTTATACTAACGTAT Chrysolophus_amherstiae ATTAATGCAGAAAC------------GTGTTTACATTTACACTAACATAT Lophophorus_lhuysii ATTAATACAAAAACAAATGCAGAAATGTGTTTACATTTACACTTAGATAC Meleagris_gallopavo ATTAATACGAAAACAAATGCAGAAACGTGTTTACATTTACACTAACATAC Phasianus_colchicus ATTAATGCAGAAACAAATGCAGAA--ACGTTTACATTTACACTAGTATAC Pucrasia_macrolopha ATTAATCCGAAAACAAATGCAGAAACATATTTACATTTACACTAACATAC Syrmaticus_reevesii ATTAATGCAGAAACAAATGCAGAAACGTGTTTACATTTACACTAACATAC Tetraophasis_szechenyii ATTAATACAAAAACAAATGCAGAAACGTGTTCACATTTACACTAACCTAC Tragopan_temminckii ATTCATTAGTAAACAAA--CAAAGGCAGGTTTACATTTCCTTTCACATAC Arborophila_ardens ATTAATACGAAAACAAATGCAGAAACATGTTTACGTTTACACTAACGTAT Arborophila_brunneopectus ATTAATACGAAAACAAATGCAGAAACATGTTTACGTTTACACT------- Gallus_gallus ATTAATACGAAAACAAATGCAGAAATGTGTTTACATTTACACTAACATAC Anas_platyrhynchos ATTAATATAAAAACAAATGCAGAAACATGTTTACATTTACACAAACATAC Arborophila_rufipectus CTCTGAGAGACTTTTGCATCGTGTTCATTTTTTGAGGTATTTAAAGATAT Chrysolophus_amherstiae TTCTGAGAGAATTTTACATCGTGTTCATTTTTTGAGATATTTAAATATAC Lophophorus_lhuysii CTCTGAGAGAATTTTACATCATGTTCATTTTTTGAGATATTTAAATATAC Meleagris_gallopavo CTCTGAGAGAATTTTACATCATGTTCATTTTTTGAGACATTTAAATATAC Phasianus_colchicus TTCTGATAGAATTTTACATCATGTTCATTTTTTGAGATATTTAAATATAC Pucrasia_macrolopha TTCTGAGAGAATTTTACATCATGTTCATTTTTTTAGATATTTAAATACAC Syrmaticus_reevesii TTCTGAGAAAATTTTACATCATGTTCAATTTTTGAGATATTTAAATATAC Tetraophasis_szechenyii CTCTGAGAGAATTTTACATCACGTTCATTTTTTGAGATATTTAAATATAC Tragopan_temminckii ATGTGAGTGAATGAATCATCCATCTCATTCATTGAGAGTGATAAATAAAT Arborophila_ardens CTCTGAGAGACTTTTGCATCGTGTTCATTTTTTGAGGTATTTAAAGATAT Arborophila_brunneopectus ------------TTTGCATCGTGTTCATTTTTTGAGGTATTTAAAGATAT Gallus_gallus CTCTGAGAGACTTTTGCATCATGTTCATTTTTTGAGATATTTAAAGATAT Anas_platyrhynchos CTCTGGGAGCCTCTTGCATCATGCTCATTTTTGGAGCTATTTAGA--TAG Arborophila_rufipectus TCTTCCTCCTCCAAAACCAGTTC-ACAGAATCACAGAATCATAGAATCCC Chrysolophus_amherstiae TTTTGCCCCTCCAAAACCAGTTC-GTAGAATCATAGGCTTATAAAAC--- Lophophorus_lhuysii TTTTGCTCCTCCAAAACCAGTTC-ATAGAATCATAGACTCATAAAAT--- Meleagris_gallopavo TTTTGCTTCTCCAAAACCAGTTC-ATAGAATCATAGATTCATAAAAT--- Phasianus_colchicus TTTTGCTCCTCCAAAACCAGTTT-GTAGAATCATAGGCTCATAAAAC--- Pucrasia_macrolopha TTTTGCTCCTCCAAAACAAGTTC-ATAGAATCATAGACTCATAAAAT--- Syrmaticus_reevesii TTTTGCTCCTCCAAAACCAGTTC-GTAGAACCATAGGCTCATAAAAC--- Tetraophasis_szechenyii TTTTGCTCCTCCAAAACCAGTTC-ATAGAATCATAGACTCATAAAAT--- Tragopan_temminckii ATTTGTTCGCTCCAAAACAGTTC-ATAGAATCATTGACTCATAAAAT--- Arborophila_ardens TCTTGCTCCTCCAAAACCAGTTC-ACAGAATCACAGAATCATAGAATCCC Arborophila_brunneopectus TCTTGCTCCTCCAAAACCAGTTC-ACAGAATCACAGAATCATAGAATCCC Gallus_gallus TTTTGCTCCTCCAAGGCCAGTTC-TTGGAATCATAGGATCACAGAAT--- Anas_platyrhynchos CATTGTTCCTCCAAAACCAGTTCCATTGAATCACAGAATGGTTTGA---- Arborophila_rufipectus AGAATGGTTGGGTTGGAAGGGACCTCCAGGATCACGAAGCTCTAACTCCC Chrysolophus_amherstiae -----AGTTGG-----GAGGGACCTCAAGGATCACAAAGCTCCAAC---- Lophophorus_lhuysii -----GGTTGG-----AAGGGACCTCAAGGATCACGAAGCTCCAACCCCC Meleagris_gallopavo -----GGTTGG-----AAGGGACCTCAAGGATCACGAAGCTCCAACCCCC Phasianus_colchicus -----AGTTGA-----GAGGGACCTCACC--TCATGAAGCTCCAACCCCC Pucrasia_macrolopha -----GGTTGG-----AAGGGGCCTTAAGGATCATGAAGCTCCAACCCTT Syrmaticus_reevesii -----AGTTGG-----GAGGGACCTCACGGACCACGAAGCTCCAACCCCC Tetraophasis_szechenyii -----GGTTGG-----AAGGGACCTCAAGGATCACAAAGCTCCAACCCCC Tragopan_temminckii -----GGTTGG-----AAGGAAGGGACAGGATCCATCAGATCCATCAACC Arborophila_ardens AGAATGGTTGGGTTGGAAGGGACCCCAAGGATCACGAAGCTCCAACCCCC Arborophila_brunneopectus AGAGCGGTTGGGTTGGAAGGGACCTCAAGGATCACGAAGCTCTAACTCCC Gallus_gallus -----GGTTGGGTTGGAAGGGACCTCAAGGATCACGAAGCTCCAAC---- Anas_platyrhynchos ------GTTGG-----AAGAGACCTTAAAGCCCATCCAGTTCCAAC---- Arborophila_rufipectus TGCTGCAGGCAGGGCCACCAACCTCCACATTTCATAGCAGCCCAGG---- Chrysolophus_amherstiae ----AGGAGCAGGGCCACCAACCCCCACATTTCAGAGCAGCCCAGGATGC Lophophorus_lhuysii CACCACAGGCAGGGCCACCAACCTCCACATTTCCCACCAGCCCAGGCTGC Meleagris_gallopavo CCTCGCATGCAGGGCCACCAACCTCCACATTTCACAGCAGCCCAGGCTGC Phasianus_colchicus CACTACAGGCAGAGCCACCAACCTCCACATTTCAGAGCAGCCCAGGCTGC Pucrasia_macrolopha TGAGGCAGGCAGGGCCACCAACCTCCACATTTCATAGCAGCCCAGGCTGC Syrmaticus_reevesii CACCACAGGCAGGGCCACCAACCTCCACATTTCACAGCAGCCCAGGCTGC Tetraophasis_szechenyii CACCACAGGCAGGGCCACCAACCTCCACATTTCATAGCAGCCCAGGCTGC Tragopan_temminckii CCCCACGGGCCGGCCCCCCAACCATTTCATAGCAGAGCAGGCCAGGCAGG Arborophila_ardens -GCCGCAGGCAGGGCCACCAACCTCCACATTTCATAGCAGCCCAGGCTGC Arborophila_brunneopectus TGCTGCAGGCAGGGCCACCAACCTCCACATTTCATAGCAGCCCAGGCTGC Gallus_gallus -------------------------------------------------- Anas_platyrhynchos -------------------------------------------------- Arborophila_rufipectus -----GCCCCATCCAACCTGGCCTTGAGCACCTCCAGGGATGGACGGGAC Chrysolophus_amherstiae CCAGGGCCCCATCCAACCTGGCCTTGAACACCTCCAGGGATGGACGGGGC Lophophorus_lhuysii CCAGGGCCCCATCCAACCTGGCCTTGAACACCTCCAGGGATGGACGGGGC Meleagris_gallopavo CCAGGGCCCCATCCAACCTGGCCTTGAACACCTCCAGGGATGGACGGGGC Phasianus_colchicus CCAGGGCCCCATCCAACCTGGCCTTGAACACCTCCAGGGATGGACGGGGC Pucrasia_macrolopha CCAGGGCCCCATCCAACCTGGCCTTGAACACCTCCAGGGATGGACGGGGC Syrmaticus_reevesii CCAGGGCCCCATCCAACCTGGCCTTGAACACCTCCAGGGATGGACGGGGC Tetraophasis_szechenyii CCAGGGCCCCATCCAACCTGGCCTTGGACACCTCCAGGGATGGACGGGGC Tragopan_temminckii GCAGGATCCCATCCAACCTTGAACAGAACCCGGGCAGACG-GGGCAGGGC Arborophila_ardens CCAGGGCCCCATCCAACCTGGCCTTGAGCACCTCCAGGGATGGACGGGGC Arborophila_brunneopectus CCAGGGCCCCATCCAACCTGGCCTTGAGCACCTCCAGGGATGGACGGGGC Gallus_gallus ------CCCC------------------TGCCTGCAGG------------ Anas_platyrhynchos -------------------------------------------------- Arborophila_rufipectus AGCCACAGCCTCTCTGGGCGGCTGTTCCAGCACCTCACCGCTCTCTCTGT Chrysolophus_amherstiae ATCCACAGCCTCTCTGGGCAGCTGTTCCAGCACCTCACCACTCTCACAGC Lophophorus_lhuysii ATCCACAGCCTCTCTGGGCAGCTGCTCCAGCACCTCACCACTCTCATAGG Meleagris_gallopavo ATCCACAGCCTCTCTGGGCAGCTGTTCCAGCACCTCACTGCTCTCATAAC Phasianus_colchicus ATCCACAGCCTCTCTGGGCAGCTGTTCCAGCACCTCACCACTCTCACAGC Pucrasia_macrolopha ATCCACAGCCTCTCTGGGCAGCTGTTCCAGCACCTCACCACTCTCATGGC Syrmaticus_reevesii ATCCACAGCCTCTCTGGGCAGCTGTTCCAGCACCTCACCACTCTCACAGC Tetraophasis_szechenyii ATCCACAGCCTCTCTGGGCAGCTGTTCCAGCACCTCACCACTCTCATAGG Tragopan_temminckii CTGCACAGCTGGGCAGGGCTCCAGCAC-AGCACCTCACCACTG-CAAAGC Arborophila_ardens ATCCACAGCCTCTCTGGGCAGCTGTTCCAGCACCTCACTGCTCTCTCTGT Arborophila_brunneopectus ATCCACAGCCTCTCTGGGCAGCTGTTCCAGCACCTCACCGCTCTCTCTGT Gallus_gallus ---------------------------------------ACTCTCATAGT Anas_platyrhynchos -------------------------------CCCCTGCCATGGGCAGGGT Arborophila_rufipectus AAAGAACTTTCC--CGATATCCAACCTGAACCTTCCCTCCTTCAACAGTT Chrysolophus_amherstiae AAACAACTTCCCTCTGACATCCAACCTCAATCTGCCCTCCTTCAACAGTT Lophophorus_lhuysii AAAGAACTTCCCCCTGACATCCAACCTAAACCTTCCCTCCTTCAACAGTT Meleagris_gallopavo AAAGAACTTCCCCCTCACATCCAACCTCAATCTTCCCTCCTTCAACAGTT Phasianus_colchicus AAACAACTTCCCCCTGACATCCAACCTCAATCTTCCCTCCTTCAACAGTT Pucrasia_macrolopha AAAGAACTTCCCCCTGACATCCAACCTCAGTCTTCTCTCCTTCAACAGTT Syrmaticus_reevesii AAAGAACTTCCCCCTTACATCCAACCTCAATCTGCCCTCCTTCAACAGTT Tetraophasis_szechenyii AAAGAACTTCCCCCTGACATCCAACCTCAATCTTCCCTCCTTCAACAGTT Tragopan_temminckii AATGAAGTTGACATCGACATCCAAATCTCACCTTCCCTCTTTCAACAGTT Arborophila_ardens AAAGAACTTTCC--CAATATCCAACCTGAACCTTCCCTCCTTCAACAGTT Arborophila_brunneopectus AAAGAACTTTCC--CGATATCCAACCTGAACCCTCCCTCCTTCAACAGTT Gallus_gallus AAAGAACTTCCC-CTGATATCCAACCTAAACCTTCCCTCCTTCAACAGTT Anas_platyrhynchos GAAGAATGTCCTCCTAATATCTAATCTAAAACT---------------TT Arborophila_rufipectus CTATGTCGGTCTGATAAGCAATTGGAAAAGTTAGGTTGATGCTTATCTAA Chrysolophus_amherstiae CTATCTCGGACTGATAAGAAATTGGGAAAGTTAGGTTGATGCTAAA---- Lophophorus_lhuysii CTATCTCGGACTGATAAGAAATTGGGAAAGTTAGGTTGATACTTGTCTAA Meleagris_gallopavo CTATCTCAGACTGATAAGAAATTGGGAAAGTTAGGTTGATACTTATCTAA Phasianus_colchicus CTATCTTGGACTGATAAGAGATCGGGAAAGTTAGGTTGATGCTAAA---- Pucrasia_macrolopha CTATCTTGGACTGATAAGAAATTGGGAAAGTTAGGTTGATGCTTAT---- Syrmaticus_reevesii CTATCTCGGACTGATAAGAAATTGGGAAAGTTAGGTTGATGCTAAA---- Tetraophasis_szechenyii CTATCTCGGACTGATAAGAAATTGGGAAAGTTAGGTTGATACTTATCTAA Tragopan_temminckii CTATCTCGGGCTGATAAGAAATTGGAAAATTTAGGTTGATGCTTATCTAA Arborophila_ardens CTATGTCT-TCTGATAAGCAATTGGAAAAGTTAGGTTGATGCTTATCTAA Arborophila_brunneopectus CTATGTCTGTCTGATAAGCAATTGGAAAAGTTAGGTTGATGCTTATCTAA Gallus_gallus CTATCTCGGGCTGATAAGAAATTGGAAAAGTTAGGTTGATGCTTATCTAG Anas_platyrhynchos CTATCTCGGGCTGATATGAAGCTGGAAGAGTTAGGCTGGCACTTATCTAA Arborophila_rufipectus AGGAGAGCGTACTTGGGCCCAGGTT-TTCCAGTGGAAGCAGGTACCTCCT Chrysolophus_amherstiae -GAAAAGTGTATTTGGGCCCAGGTTCTTCTAGTGAAAGCAGGTACCTCCT Lophophorus_lhuysii AGAAGAGTGTATTTGGGCCCTGGTTCTTCCAGTGAAAGCAGGTACCTCCT Meleagris_gallopavo AGAAGAGTGTATTTGGGCCCAGGTTCTTCCAGTGGAAGCAGGTACCCCCT Phasianus_colchicus -GAAAAGTGTATTTGGGCCCAGGTTCTTCTAGTGAAAGCAGGTACCTCCT Pucrasia_macrolopha AGCTGAGTGTATTTGGGCCCAGGTTCTTCCAATGGAAGAAGGTACCTCCT Syrmaticus_reevesii -GAAAAGTGTATTTGGACCCAGGTTCTTCTAGGGAAAGCAGGTATCTCCT Tetraophasis_szechenyii AGAAGAGTGCATTTGGGCCCAGGTC--TCCAGGAGAAGCAGGTACCTCCT Tragopan_temminckii AGAAGAGTGTACT-GAGCCCAGGTC--TCCAGTGGAAGCAGGTACCTCCT Arborophila_ardens AGGAGAGCGTACTTGG-CCCAGGTT-TTCCAGTGAAAGCAGGTACCTCCT Arborophila_brunneopectus AGGAGAGCGTACTTGGGCCCAGGTT-TTCCAGTGGAAGCAGGTACCTCCT Gallus_gallus AGAAGAGTGTACGTGGGCCCAAGTTCTTCCAGTGGAAGCAGGTACCTCTT Anas_platyrhynchos AGAAGTGTCTATTTGGGCCCAGGTGCTGCCAGTGAAAGCAGATGCCTCCT Arborophila_rufipectus GTGGATTGCATTCTCTGTAGACACAAAGAGTCAGATGTTCATCAGAAATA Chrysolophus_amherstiae GTGGATTGCATTCTCTGTAGACACAAAGAATCAGAAGTTCATCAGAAATA Lophophorus_lhuysii GTGGATTGCATTCTGTGTAGACACAAAGAATCAGAAGTTCATCAGAAATA Meleagris_gallopavo GTGGATTGCATTCTCTGTAGACACAAAGAATCAGAAGTTCATCAGAAATA Phasianus_colchicus GTGGATTGCATTCTCTGTAGACACAAAGAATCAGAAGTTCATCAGAAATA Pucrasia_macrolopha GTGGATTGCATTCTCTGTAGACACAAAGAATAAGAAGTGCATCAGAAATA Syrmaticus_reevesii GTGGATTGCATTCTCTGTAGACACAAAGAATCAGAAGTTCATCAGAAATA Tetraophasis_szechenyii GTGGACTGCATTCTCTGTAGACACAAAGAATCAGAAGTTCATCAGAAATA Tragopan_temminckii GTGGATTGCATTCTCTGTAGACACAAAGAATCAGAAGTTCATCAGAAATA Arborophila_ardens GTGGATTGCATTCTCTGTAGACACAAAGAGTCAGAAGTTCATCAGAAATA Arborophila_brunneopectus GTGGATTGCATTCTCTGTAGACACAAAGAGTCAGAAGTTCATCAGAAATA Gallus_gallus GTGGATTGCATTCTCTGTAGACACAAAGAATCAGAAGTTCATCAGAAATA Anas_platyrhynchos GTGGACTGCACTCTCTGTAGACACAGCAAATTACTAGTCCATCAGAAATA Arborophila_rufipectus TCTTCCGGTGAAGTATGAAACTCTGCACAGCTTCTGTGCAATAACACGTG Chrysolophus_amherstiae TCTTCCAATGAAGTATGAAACTCT-----GCTTCTGTACA------CATG Lophophorus_lhuysii TCTTCCAATGAAGTATGAAACTCT-----GCTTCTGTACA------CATG Meleagris_gallopavo TCTTCCAATGAAGTATGAAACTCT-----GCTTCTGTACA------GATG Phasianus_colchicus TCTTCCAATGAAGTATGAAACTCT-----GCTTCTGTACA------CGTG Pucrasia_macrolopha TCTTGCAATGAAGTATGAAACTCT-----GCTTCTGTACA------CATG Syrmaticus_reevesii TCTTCCAATGAAGTATGAAACTCT-----GCTTCTGTACA------CATG Tetraophasis_szechenyii TCTTCCAGTGAAATATGAAACTCT-----GCTTCTGTACA------CATG Tragopan_temminckii TCTTCCAGTGAAGCATGAAACT-------GTTTCTGTACA------CATG Arborophila_ardens TCTTCCGGTGAAGTATGAAACTCTGCACAGCTTCTGTGCAATAACAGGTG Arborophila_brunneopectus TCTTCCGGTGAAGTATGAAACTCTGCACAGCTTCTGTGCAATAACACGTG Gallus_gallus TCTTCCAGCGAAGCATGAAACTCTGCACAGCTTCTGTCCAATACCATACG Anas_platyrhynchos TCTTCCAATGAAATGTGAAACTGC--ACAGCTTCTGTACAATGCCATATC Arborophila_rufipectus AACCCAGCTGAAGAGTCACAACCTTCCTATACCACATCCAGTTCTGAACC Chrysolophus_amherstiae AACCCAACTGAAGAGTCACAACCTACCCATACC--ATCCAGTTCTAAACC Lophophorus_lhuysii AATCCAGCTGAAGAGTCACAACCGACCCATACC--ATCCAGTTCTGAACC Meleagris_gallopavo AACCCAGCTGAAGAGTCACAACCTACGCATACC--ATCCAGTTCTGAACC Phasianus_colchicus AACCCAGCTGAAGAGTCACAACCTACCCATAC---ATCCAGTTCTGAACC Pucrasia_macrolopha AACCCAGCTGAAGAGTCACAACCTAACCACACC--ATCCAGTTCTGGACC Syrmaticus_reevesii AACCCAACTGAAGAGTCACAACCTACCCATACC--ATCCAGTTCTGAACC Tetraophasis_szechenyii AACTCAGCTGAAGAGTCACAACTGACCCATACC--ATCCAGTTCTGAACC Tragopan_temminckii AACCCAGCTGAAGAGTCACAACCGACCCATACC--ATCCAGTTCTGAACC Arborophila_ardens AACCCAGCTGAAGAGTCACAACCTTCCCATACCACATCCAGTTCTGAACC Arborophila_brunneopectus AACCCAGCTGAAGAGTCACAACCTTCCCATACCACATCCAGTTCTGAACC Gallus_gallus AACCCAACTGAAGAATCACAGCTTACCCATACC--ATCCAGTTCTGAACC Anas_platyrhynchos ACTCTAACTGCAGAGTCACATCTTACCCATGCCATGTCCAGTTCTGAGCC Arborophila_rufipectus CCACCAGGCTCATTTCCACAGACACAGCTGACTCTTGGCAGGGAAGGGTC Chrysolophus_amherstiae CCACCAGGCTCATTTCCATAGACACAGCTGACTCTTGACAGAGAAGGGTC Lophophorus_lhuysii CCACCAGGCTCATTTCCACAGACACAGCTGACTCTTGACAGAGAAGGGTC Meleagris_gallopavo CCACCAGGGTCATTTCCACAGACACAGCTGACTCTTGACAGAGGAAGGTC Phasianus_colchicus CCACCAGGCTCATTTCCACACACACAGCTGACTTTTGACAGAGAAGGGTC Pucrasia_macrolopha CCACCAGGCTCATTTCCACAGACACAGCTGACTCTTGACAGAGAAGTGTC Syrmaticus_reevesii CCACCAGGCTCATTTCCACAGACACAGCTGACTCTTGACAGAGAAGGGTC Tetraophasis_szechenyii CCACCAGGCTCATTTCCACAGACACAGCTTATTCTTGACAGAGAAGGGTC Tragopan_temminckii CCACCAGGCTCATTTCCACAGACACAGCTGATTCTTGACAGAGAAGGGTC Arborophila_ardens CCACCAGGCTCATTTCCACAGACAGAGCTGACTCTTGGCAGGGAAAGGTC Arborophila_brunneopectus CCACCAGGCTCATTTCCACAGACACAGCTGACTCCTGGCAGGGAAAGGTC Gallus_gallus CCACCAGGTTCATTTCCACAGACACAGCTGACTCTTGACAGGGAAGGGTC Anas_platyrhynchos CGACCAGGCTCATTTCCACAGACTCGGCTGAC----GACAGGGAAGGTTC Arborophila_rufipectus AGGGTGGATATCAGGAAAAGGTTCTTCTCCAGGGGGTGTTTGGGTACTGG Chrysolophus_amherstiae AGGGTGGACATCGGGAAAAGATTCTTCATCAGAGG-TGGT--------GG Lophophorus_lhuysii AGGGTGGATATCGGGAAAAGATTCTTCACCAGAGG-TGGT--------GG Meleagris_gallopavo AGGGTGGATATCAGGAAAAGATTCTTCATCAGAGG-TGGT--------GG Phasianus_colchicus AGGGTGGACATCGGGAAAAGATTCTTCATCAGAGG-TGGT--------GG Pucrasia_macrolopha AGGGTGGATATCAGGAAAAGATTCTTCATCAGAGG-TGGT--------GA Syrmaticus_reevesii AGGGTGAACATCGGGAAAAGATTCTTCATCAGAAG-TGGT--------GG Tetraophasis_szechenyii AGGGTGAATATTGGGAAAAGATTCTTCACCAGAGG-TGGT--------GG Tragopan_temminckii AAGGTGGATATCGGGAAAAGATTCCTCACCAGAGG-TGGT--------GG Arborophila_ardens AGGGTGGATATCAGGAAAAGGTTCTTCTCCAGGGGGTGTTTGGGTACTGG Arborophila_brunneopectus AGGGTGGATATCAGGAAAAGGTTCTTCTCCAGGGGGTGTTTGGGTACTGG Gallus_gallus AGGGTGGATATCGGGAAAAGCTTCTTCAGCAGAGG-TGATTGGATACTGG Anas_platyrhynchos AGGTTGGATATCAGGGAAAGGTTCTTCACGAAGAG--------------G Arborophila_rufipectus AACAGGCTCCCCAGAGCAGTAGCCATGGCACCAAGCTTTCCAGAGATCAG Chrysolophus_amherstiae ATCAGGCTCCC-AGAGCAGTAGTCATGGCATCAAGCTCGCCAGAGATCAG Lophophorus_lhuysii AACAGGCTCCCCAGAGCAGTAGTCATGGCATCAAGCTCGCCAGAGATCAG Meleagris_gallopavo AACAGGCTCCCCAGAGCAGTAGTCATGGCATCAAGCTCACCAGAGATCAG Phasianus_colchicus AACTGGCTCCC-AGAGCAGTAGTCATGGCATCAATTTCGCCAGAGATCAG Pucrasia_macrolopha AACAGGCTCCCCAGAGCAGTAGTCATGGCATCAACCTCGCCAGAGATCAG Syrmaticus_reevesii AACAGGCTCCC-AGAGCAGTAGTCATGGCATCAAGCTCGCCAGAGATCAG Tetraophasis_szechenyii AACAGGCTCCCCAGAGCAGTAGTCATGGCATCAAGCTCACCAGAGATCAG Tragopan_temminckii AACAGGCTCCCCAGATCAGTAGTCATGGCATGAAGCTCTCCAGAGATCAG Arborophila_ardens AACAGGCTCCCTAGAGCAGTAGTCATGGCACCAAGCTTGCCAGAGATCAG Arborophila_brunneopectus AACAGGCTCCCCAGAGCAGTAGTCATGGCACCAAGCTTGCCAGAGATCAG Gallus_gallus AACAGGCTCCCCAGAGCAGCAGTCATGGCATCAAGCTCGTCAGAGATCAG Anas_platyrhynchos AACAGGCTCCCCAGAGCAGTGGTCATGGCACTGAGGCTGCTGGAGTTCAA Arborophila_rufipectus GAAGTGTCAGGACAACGCTCTTAAATGCACGGTGATTTGATGTGATGTGG Chrysolophus_amherstiae GAAGTGACAGAACAACGCTCTCAAATGTACAGTGATTT----TTGGGTGA Lophophorus_lhuysii GAAGTGACAGAACGATGCTCTCAAATGTACAGTGATTT----TTGGATGG Meleagris_gallopavo GAAGTGACAGAACAACACTCTCAAATGTACAGTGATTT----TTGGGTGG Phasianus_colchicus GAAGTGACAGAATAAAGCTCTCAAATGTACAGTGATTT----TTGGGTGA Pucrasia_macrolopha GAAGTGACGGAACAATACTCTCAAATATACAGTGATTT----TTGGGTGG Syrmaticus_reevesii GAAGTGACAGAACAACGCTCTCAAATGTACAGTGATTT----TTGGGTGA Tetraophasis_szechenyii GAAGTGACAGAACAACGCTCTCAAATGTACAGTGATTT----TTGGGTGG Tragopan_temminckii GAAGTGACAGAACAACGCTCTCAAATGTACAGTGATTT----TTGGGTGG Arborophila_ardens GAAGTGTCAGGACAACGCTCTTAAATGTACGGTGATTTGATGTGATGTGG Arborophila_brunneopectus GAAGTGTCAGGACAACGCTCTTAAATGTACGGTGATTTGATGTGATGTGG Gallus_gallus GAAGTGTCAGAACAACACTCTCAAATGTACAGTGATTT----TTGGGTGG Anas_platyrhynchos GTTGCATTTGGACAATGCTCTCAGACATATGGTAATTT-----TGAGTGT Arborophila_rufipectus CCCTATGTGGTGCTGCCAAGAGTTGGACTTGATGATTCTTCTAGGTCCCT Chrysolophus_amherstiae TCCTATGTGATGC---CAAGAGTTGGACTTGATGATTCTTCTGGTTCCCG Lophophorus_lhuysii TCCTATGTGATGC---CAAGAGTTGGACTTGATGATTCTTCTGGGTCCCT Meleagris_gallopavo TCCTATGTGATGC---CAAGAGTTGGACTTGATGATTCTTCTGGATCCCT Phasianus_colchicus TCCTATGTAATGC---CAAGAGTTGGACTTGATGATTCTTCTGGGTCCCA Pucrasia_macrolopha TCCTGTGTGATGC---CAAGAGTTGGACTTGATGATTCTTCTGGGTCCCT Syrmaticus_reevesii TCCTATGTGATGC---CAAGAGTTGGACTTGATGATTCTTCTGGATCCCA Tetraophasis_szechenyii TCCTATGTGTTGC---CAAGAGTTGGACTTGATGATTCTTCTGGGTCCCT Tragopan_temminckii TCCTATGTGATGC---CAAGAGTTGGACTTGATGATTCTTCTGGGTCCCT Arborophila_ardens CCCTATGTGGTGCTGCCAAGAGTTGGACTTGATGATTCTTCTAGGTCCCT Arborophila_brunneopectus TCCTATGTGGTGCTGCCAAGAGTTGGACTTGATGATTCTTCTAGGTCCCT Gallus_gallus TTCTATGTGATGC---CAAGTGTTGGACTTGATGATTCTTCTGGGTCCCT Anas_platyrhynchos TCCTGTGTAGATC---CAGGAGGTGGACTTGATGATTCTTGTGGTTCCCT Arborophila_rufipectus TACAACTCAGGACATTCTATGACTCTATGACTTGGGAGAGCCTCATGTGA Chrysolophus_amherstiae TCCAACTTAGGACGTTCTATGATTCTATGACTTGGGAGAGCCTCACTTGA Lophophorus_lhuysii TCCAAGTCAGGATGTTCTATGATTCTATGACTTGGGAGAGCCTCATGTGA Meleagris_gallopavo TCCAAGTCAGGATGTTCTGTGATTATATGACTTGAGAGAGCCTCACGTGA Phasianus_colchicus TCCAACTTAGGACGTTCTATGACTCTATAACTTGGGAGAGCCTCACTTGA Pucrasia_macrolopha TCCAACTCAGGACGTTCTATGATTCTATGACTTGGGAGGGCCTCATGTGA Syrmaticus_reevesii TCCAACTCAGGACGTTCTATGATTCTGTGACCTGGGAGAGCCTCACTTGA Tetraophasis_szechenyii TCCAAGTCAGGACGTTCTATGATTCTATGACTTGGGAGAGCCTCACGTGA Tragopan_temminckii TCCAAGTCAGGATGTTCTATGATTCTATGACTTGGGAGAGTCTCATGTGA Arborophila_ardens TACAACTCAGGACATTCTATGACTCTATGACTTGGGAGAGCCTCATGTGA Arborophila_brunneopectus TACAACTCAGGACATTCTATGACTCTATGACTTGGGAGAGCCTCATGTGA Gallus_gallus TCCAACTCAGGACATTCT--GATTCTATGACTTGGGAGAGCCTCACATGA Anas_platyrhynchos TCCAACTCGGGATATTTTATGATTCTATGA-------------------- Arborophila_rufipectus GCTGTGTGTTGCGCAATTCCAGCACCCAGTGTTGGAAACTGTTTGCTATA Chrysolophus_amherstiae GCTGTGTGTTGCACAACTCCAACGCGCAGTGTTGAAAAGTGTTTGCTACA Lophophorus_lhuysii GCTGTGTGTTGCAGAACTCCAACGCACAGTGTTGAAAAGTGTTTGCTATA Meleagris_gallopavo GCTGTGTGTTGCACAACTCCAACGCATAGTGTTGAAAAATGTTTGCTATA Phasianus_colchicus GCTGTGTGTTGCACAACTCCAACGCGCAGTGTTGAAAAGTGTTTGCTATA Pucrasia_macrolopha GCTGCGTGTTGCACAACTCCAACGCACAGCACTGAAAAGTGTTTGCTATA Syrmaticus_reevesii GCTGTGTGTTGCACAACTCCAACGCAAAGTGTTGAAAAGTGTTTGCTACA Tetraophasis_szechenyii GCTGTGTGTTGCACAACTCCAACGCACAGTGTTGAAAAGTGTTTGCTATA Tragopan_temminckii GCTGTGTGTTGCACAACTCCAACGCACAGTGTTGAAAAGTGATTGCTATA Arborophila_ardens GCTGTGTGTTGCGCAACTCCAGCACCCAGTGTTGGAAACTGTTTGCTATA Arborophila_brunneopectus GCTGTGTGTTGCGCAACTCCAGCACCCAGTGTTGGAAACTGTTTGCTATA Gallus_gallus GCTGTGCGTTGTGCATCTCCAACGCACAGTGTTGAAAAGTGTTTGCTATA Anas_platyrhynchos -------------------------------------------------- Arborophila_rufipectus GAAAAAGCTGGAGCTACATGAATGAGAAAACGATGCCAGCCCACTGTGCC Chrysolophus_amherstiae GAAAAAGCTGGAGCTACATGAATGAGAATACGATGCCAGCCCACTGTGCC Lophophorus_lhuysii GAAAAAGCTGGAGCTACATGAATGAGAATACGATGCCAGCCCACTGTGCC Meleagris_gallopavo GAAAAAGCTGGAGCTACATGAATGAGAATATGATGCCAGCCCACTGTGCC Phasianus_colchicus GAAAAAGCTGGAGCTACATGAATGAGAATATGATGCCAGCCCACTGTGCC Pucrasia_macrolopha GAAAAAGCTGGAGCTACATGAATGAGAATACGATGCCAGCCCACTGTGCC Syrmaticus_reevesii GAAAAAGCTGGAGCTACATGAATGAGAATACGATGCCAGCCCACTGTGCC Tetraophasis_szechenyii GAAAAAGCTGGAGCTACATGAATGAGAATACGATGCCAGCCCACTGTGCC Tragopan_temminckii TAAAAAGCTGGAGCTACATGAATGAGAATATGATGCCAGCCCACTGTGCC Arborophila_ardens GAAAAAGCTGGAGCTACATGAATGAGAAAACGATGCCAGCCCACTGTGCC Arborophila_brunneopectus GAAAAAGCTGGAGCTACATGAATGAGAAAACGATGCCAGCCCACTGTGCC Gallus_gallus GAAAAAGCTGGAGCTATATGAATGAGAATACGATGCCAGCCCGCTGTGCC Anas_platyrhynchos ------GCTGGAGCTAAATGAATGAGAACAAGATGCCAGCCCCCTGTGCC Arborophila_rufipectus TTCTTTCAGTTTTACGCACATATTTTAAGCTACGTCCATATCCTCCTATC Chrysolophus_amherstiae TTCTTTCAGTTTTATGCACATATTTTAAGCTACATCCATATCCTCCATTC Lophophorus_lhuysii TTCTTTCAGTTTTATGCACATATTTTAAGCTACATCCATATCCTCCTTTC Meleagris_gallopavo TTCTTTCAGTTTTATGCACATATTTTAAGCTACATCCATATCCTCTTATC Phasianus_colchicus TTCTTTCAGTTTTATGCACATATTTTAAGCTACATCCATATCCTCCAATC Pucrasia_macrolopha TTCTTTCAGTTTTATGCACATATTT-AAGCTACATCCATATCCTCTTATC Syrmaticus_reevesii TTCTTTCAGTTTTATGCACATATTTTAAGCTACATCCATATCCTCCATTC Tetraophasis_szechenyii TTCTTTCAGTTTTATGCACATATTTTAAGCTACATCCATATCCCTTTTTC Tragopan_temminckii TTCTTTCAGTTTTATGCACATATTT-AAGCTACATCCAT-TCCTCCATTC Arborophila_ardens TTCTTTCAGTTTTACGCACATATTTTAAGCTACATCCATATCCTCTATTC Arborophila_brunneopectus TTCTT-CAGT--TACGCACATATTTTAAGCTACATCCATATCCTCCTTTC Gallus_gallus TTCTTTCAGTTTTACACGCATATTTTAAGCTACATTCATATCCTCCTATC Anas_platyrhynchos TTCATTCAGTTAAATACCCATATTTAAAGCTACAAGCATTTCCATCGCTC Arborophila_rufipectus CCTGTTTGTGCTGCTACCTGTGACTAGTTTGCCTGGGGAGCCTCAGGAAG Chrysolophus_amherstiae CCTGTTTGTGCTGCTACCTGTG-CTAGCTTGCCTTGGGAGCCTCAGGAAG Lophophorus_lhuysii CCTGTTTGTGCTGCTACCTGTGACTAGCTTGCCTGGGGAGCCTCAGGAAG Meleagris_gallopavo CCTGTTTGTGCTGCTACCTGTGACTAGCTTGCCTTGGGAGCCTCAGGAAG Phasianus_colchicus CCTGTTTGTGCTGCTACCTGTGACTAGCTTGCCTTGGGAGCCTCAGGAAG Pucrasia_macrolopha CCTGTTTGTGCTGCTACCTGTGACTAGCTTGCCTTGGGAGCCTTGGGAAG Syrmaticus_reevesii CCTGTTTGTGCTGCTCCCTGTG-CTAGCTTGCCTTGGGAGCCTCAGGAAG Tetraophasis_szechenyii CCTGTTTGTGCTCCTACCTGTGACTAGCTTGCCTTGGGAGCCTCAGGAAG Tragopan_temminckii CCTGTTTGTGCTGCTACCTGTGACTAGCTTGCCTTGAGAGCCTCAGGAAG Arborophila_ardens CCTGTTTGTGCTGCTGCCTGTGACTAGTTTGCCTGGGGAGCCTCAGGAAG Arborophila_brunneopectus CCTGTTTGTGCTGCTGCCTGTGACTAGTTTGCCTGGGGAGCCTCAGGAAG Gallus_gallus CCTGTTTGTGTTGCTACCTGTGACTAGCTTGCCTGGGGAGCCTCAGGAAG Anas_platyrhynchos CCCATTTGTGCTGCCGCGTGTGACTGGCTTACCTGGTGAGACTCAGGGAG Arborophila_rufipectus AGAGAGAAGTCCCGCATTCCCTTAGCAGAAGGCGTATATGCCATCTTCTT Chrysolophus_amherstiae AGAGAGAACTCCCATATTCTCTTATCAGAATGCATATATGCCATCTTCTT Lophophorus_lhuysii AGAGAGAACTCCCATATTCTCTTATTAGAATGTATATATGCCATCTTCTT Meleagris_gallopavo AGAGAGAACTCCCATATTCTCTTATCAGAATGCACATATGCCATCTTCTT Phasianus_colchicus AGAGAGAACTCCCATATTCTCTTATCAGAATGCRTATATGCCATCTTCTT Pucrasia_macrolopha AGAGAAAACTCCCATATTCTCTTATCAGAATGCA---------TCTTCTT Syrmaticus_reevesii AGAGAGAACTCCCATATTCTCTTATCAGAATGCATATATGCCATCTTCTT Tetraophasis_szechenyii AGAGAGAACTCCCATATTCTCTTATTAGAATGCATATATGCCATCTTCTT Tragopan_temminckii AGAGAGAACTCCTATATTCTCTTATTAGAATGCATATA------------ Arborophila_ardens AGAGAGAAGTCCCGCATTCCCTTAGCAGAAGGCATATATGCCATCTTCTT Arborophila_brunneopectus AGAGAGAAGTCCCGCATTCCCTTAGCAGAAGGCATATATGCCATCTTCTT Gallus_gallus AGAGAGAGCTCCTGTATTCTCTTACCAGAATGCATATATGCCATCTTCTT Anas_platyrhynchos GGAGGCAACTCCCTTATTCTCTTACCAGAATGCATATAAGCCATCTCCTT Arborophila_rufipectus GGTCA-CACTAGCATCAAGGAGAGCACATGTGTGGTTCAGGGCTGGAGAA Chrysolophus_amherstiae GGTCAGTATTAGCATCAGGGAGAGCACATTTGTGATTCAGGGCTGGAGAT Lophophorus_lhuysii GGTCAATACTAGCATCAAGGAGAGCACGTTTATGATTCAGGGCTGGAGAA Meleagris_gallopavo GGTCAATACTAGTGTCAAGGAGAGCACGTTTATGATTCAGGACTGGAGAA Phasianus_colchicus GGTCAGTACTAGCGTCAAGGAGAGCACGTTTGTGATTCAGGGCTGGAGAT Pucrasia_macrolopha GGTCAGTGCTGGCGTCAAGGAGAGCATGTTTATGATTCGGGTCTGGAGAA Syrmaticus_reevesii GGTCAATACTAGC-TCAAGGAGAGCACGTTTGTGATTCAGGGCTGGAGAT Tetraophasis_szechenyii AGTCAATACTAGCATCAAGGAAAGCACGTTTATGATTTAGGGCTGGAGAA Tragopan_temminckii ---------TGCCATCAAGGAGAGCACGTTTGTGATTCAGAGCTGGAGAA Arborophila_ardens GGTCA-CACTAGCATCAAGGAGAGCACATGTGTGGTTCAGGGCTGGAGAA Arborophila_brunneopectus GGTCA-CACTAGCATCAAGGAGAGCACATGTGTGGTTCAGGGCTGGAGAA Gallus_gallus GGTCAGTACTAGCATCAAGGAGGGCACATTTGTGATTCAGGGCTGGAGAA Anas_platyrhynchos GGTCAGTGTTAGGATCAAGAGGAGTGTGTTTGTGGTTCAGGGCTGAAAGA Arborophila_rufipectus CTACCAGGTAAGTGATGTGCTTGTCTGGAGCTCAGGTAACACAGAATGGC Chrysolophus_amherstiae CTAGCAGGTAAGTGATGTGCTTGGCTGGAGCTCAGGTAGCACAGAATGGC Lophophorus_lhuysii CTAGCAGGTAAGTGATGTGCTCGGCTGGAGCTCAGGTAGCACAGGATGGC Meleagris_gallopavo CTAGCAGGTAAATGATGTGCTCGGCTGGAGCTCAGGTAGCACAGAATG-C Phasianus_colchicus CTAGCAGGTAAGCGATGTGCGCGGCTGGAGCTCAGGTAGCACAGAATGGC Pucrasia_macrolopha CTAGCAGGTAAGTGATGTGCTCGGCTGGGGCTCAGGTAACACAGAATGGC Syrmaticus_reevesii CTAGCAGGTCAGTGATGTGCTCGGCCGGAGCTCAGGTAGCACAGAATGGC Tetraophasis_szechenyii CTAGCAGGTAAGTGATGTGCTCGGCTGGAGCTCAGGTAGCACAGAATGGC Tragopan_temminckii CTAGCAGGTAAGTGATGTGCTCGGCTGGAGCTCAGGTAGCACAGAATGGC Arborophila_ardens CTACCAGGTAAGTGATGTGCTTGGCTGGAGCTCAGGTAACACAGAATGAC Arborophila_brunneopectus CTACCAGGTAAGTGATGTGCTTGGCTGGAGCTCAGGTAACACAGAATGAC Gallus_gallus CTAGCAGGTAAGTGATGTGCTCGGCTGGAGCTCAGGTAGCACAGAATGGC Anas_platyrhynchos CTAGCAGGTAAGTGATGTGCTTGGCTAGGGCTCACCCAGCACACCGAGGC Arborophila_rufipectus CTTAGAAGTTTCATATATCCAAAGATTCCTGCCCCTCTGGTCCCTTGCGA Chrysolophus_amherstiae CTTAGAAGTTTCATATATCCAAAGGCTCCTGCCCCTCCACTCCCT-GTGA Lophophorus_lhuysii CTTCGAAGTTTCATATATTCAAAGGCTGCTGCCCCTCCACTCCCT-GTGA Meleagris_gallopavo CTTAGAAGTTTCATATA----AAGGCTCCTGCCCCTCCACTCCCT-GTGA Phasianus_colchicus CTTAGAAGTTTCATATATCCAAAGGCTCCTGCCCCTCCGCTCCCT-GTGA Pucrasia_macrolopha CTTAGAAGTTTCATATATCCAAAGGCTCCTGCCCCTCCACTCCCT-GTGA Syrmaticus_reevesii CTTAGAAGTTTCATATATCCAAAGGCTCCTGC--------TCCCT-GTGA Tetraophasis_szechenyii CTTAGAAGTTTCATATATCCAAAGGTTCCTGCCCCTCCACTCCCT-GTGA Tragopan_temminckii CTTAGAAGTTTCATATATCCAAAGGCTCCTGCCCCTCCACTCCCT-GTGA Arborophila_ardens CTTAGAAGTTTCATATATCCAAAGATTCCTGCCCCTCTGCTCCCTTGTGA Arborophila_brunneopectus CTTAGAAGTTTCATATATCCAAAGATTCCTGCCCCTCTGCTCCCTTGTGA Gallus_gallus CTTAGAAGTTTCATATATGCAAAGGCTCCTGCCCCTCCGCTCCCT-GTGA Anas_platyrhynchos CTCAGGAGTTTTGGATATCCAAAGGTTC---------------------- Arborophila_rufipectus GGAGCTGTAGGCTCCCATGAGGCCTCCCTTCAGCCTCCTCCTCTCTGAGC Chrysolophus_amherstiae GGAGCTGCAAGCTCCCATGAGGCCTCTCCTCAGCCTCTTCTTCTCTGAGC Lophophorus_lhuysii GGAGCTGTAGGCTCCCATGAGGCCTCTCCTCAGCCTCTTCTTCTCTGAGC Meleagris_gallopavo GGAGCTGTAGGCTCCCGTGAGGCCTCTCCTCAGCCTCTTCTTCTCTGAGT Phasianus_colchicus GGAGCTGCAGGCTCCCATGAGGCCTCTCCTCAGCCTCTTCTCCTCTGAGC Pucrasia_macrolopha GGAACTGTAGGCTCCCATGAAGCCTCTCCTCAGCCTCTTCTTCTCTGAGC Syrmaticus_reevesii GGAGCTGCAGGCTCCCATGAGGCCTCTTCTCAGCCTCTTCTTCTCTGAGC Tetraophasis_szechenyii GGAGCTGTAGGCTTCCATGAGGCCTCTCCTCAGCCTCTT---CTCTGAGC Tragopan_temminckii GGAGCTGTAAGCTGCCATGAGGCCTCTCCTCAGCCTCTTCTTCTCTGAGC Arborophila_ardens GGAGCTGTAGGCTCCCATGAGGCCTCCCTTCAGCCTCCTCCTCTCTGAGC Arborophila_brunneopectus GGAGCTGTAGGCTCCCATGAGGCCTCCCTTCAGCCTCCTCCTCTCTGAGC Gallus_gallus GGAGCTGTAGGCTCCCACGAGGCCTCTCCTC-GCCTCCTCTTCTCTGAGC Anas_platyrhynchos --------AGGCCGCCATGAGGCCTCCCCTCAGCCTGCTCTGCTCTGGGC Arborophila_rufipectus TGAACAAACCAAGAGACCTCAGTCTCTCCTCACATGCCTTGCTTGC-TAG Chrysolophus_amherstiae TGAACAAACCAAGATACCTCAATCTCT--TCATATGCCTTGCTTGCCTAG Lophophorus_lhuysii TGAGCAAACCAAGAGACCTCAGTCTCTCTTCATATGCCTTGCTTGCCTAG Meleagris_gallopavo TGAACAAACCAAGAGACCTCAGTCTCTCTTCACATCCCTTGCTTGCCTTG Phasianus_colchicus TGAACAAACCAAGACACCTCAGTCTCTCTTCATATGCCTTGCTTGCCTAG Pucrasia_macrolopha TGAACAAACCAAGAGGCCTCAGTCTCTCTTCATATGTCTTGCTTGCCTAG Syrmaticus_reevesii TGAACAAACCAAGATACCTCAGTCTCTCTTCATATGCCTTGCTTGCCTAG Tetraophasis_szechenyii TGAACAAACCAAGAGACCTCAGTTTCTCTTCATATGCCTTGCTTGCCTAG Tragopan_temminckii TGAACAAACCAAGAGACCTCAGTCTTTATTCGTATGCCTTGCTTGCCTAG Arborophila_ardens TGAACAAACCAAGAGACCTCAGTCTCTCCTCACATGCCTTGCTTGC-TAG Arborophila_brunneopectus TGAACAAACCAAGAGACCTCAGTCTCTCCTCACATGCCTTGCTTGC-TAG Gallus_gallus TGAACAAACCAAGAGACCACAGTCTCTCTTCATATGCCTTGCTTGCCTAG Anas_platyrhynchos TGAGCAAACCAAGGGACCTCAGCTGTTCTTCTTGTATCTTCCCCTC-CAG Arborophila_rufipectus ACCCTTTGTTATCTTCAGAACCCTCTTTCAGTCACTCTTTACTATAAAGT Chrysolophus_amherstiae ACCTTGCACAATCTTCGTAAC-TTCCTTTAGATGATCTTTACTATAAAGT Lophophorus_lhuysii ACCCTGCACTATCTTCATAAC-TTCCT------GATCTTTACTATAAAGT Meleagris_gallopavo ACCCTGCACTATTTTCATAAC-TTCCTTTAGATGATCTTTACTATAAAGT Phasianus_colchicus ACCCTGCTCAATCTTCATAAC-TTCCTTTAGATGATCTTTACTATAAAGT Pucrasia_macrolopha ACCCTGCGCTATCTTTATAAC-TTCCTTTAGATGATCTTTACTATAAAGT Syrmaticus_reevesii ACCCTGCACGATCTGCATAAC-TTCCTTTAGATKATCTTTACTATAAAGT Tetraophasis_szechenyii ACCCTGCACTATCTTCATAAC-TTCCTTTAGATGATCTTTACTATAAAGT Tragopan_temminckii ACCCTGCACTATCTTCATAAC-TTCCTTTA---GATCTTTACTATAAAGC Arborophila_ardens ACCCTTCGTTATCTTCAGAACCCTCTTTCAGTCACTCTTTACTATAAAGT Arborophila_brunneopectus ACCCTTCGTTATCTTCAGAACCCTCTTTCAGTCACTCTTTACTATAAAGT Gallus_gallus ACCCTTCACTATCTTCATAGCCTTCCTTTAGATGGTCTTTACTATGAAGT Anas_platyrhynchos ACCCTTCACCATCTTTGTAGCCCTCCTTTGGACACTCTATAATA----GT Arborophila_rufipectus TTTATGTCCTCATATTGTGGCACCCGAAACTGCACA--ATTGCTTCTAAG Chrysolophus_amherstiae TTTATGTCCTTGTATTGTGGTGCCCAAAACTGTACACAGTTTCTTCTAAG Lophophorus_lhuysii TTTATGTCCTCGTATTGTGGTGCCTAAAACTGTACACAGTTGCTTCTAAG Meleagris_gallopavo TTTATGTCCTCGTATTGTGGTGCCCAAAACTGTACACAGTTGCTTCTAAG Phasianus_colchicus TTTATGTCCTCGTATTGTGGTGCCCGAAACTGTACACAGTTGCTTCTAAG Pucrasia_macrolopha TTTATGTTCTCGTATTGTGGTGCCTAAAACTGTACA--GTTGCTTCTAAG Syrmaticus_reevesii TTTATGTCCTC-----ATGGTGCCCTAAACTGTACACAGTTGCTTCTAAG Tetraophasis_szechenyii TTTATGTCCTCGTATTGTGGTGCCCAAAACTGTACACAGTTGCTTCTAAG Tragopan_temminckii TTTATGTTCTCGTATTGTGGTGCCCAAAACTGTACACAGTTGCTTCTAAG Arborophila_ardens TTTATGTCCTCATATTGTGGCACCCGAAACTGCACG--ATTGCTTCTAAG Arborophila_brunneopectus TTTATGTCCTCATATTGTGGCACCCGAAACTGCACG--ATTGCTTCTAAG Gallus_gallus TTTATGTCCTTGTATTGTGGTGCCCAAAAATGTACACAGTTGCTTCTAAG Anas_platyrhynchos TTTATGTCCTTATACTGTGGTGTCCAGAACTGCACA-------------- Arborophila_rufipectus CGTTGTTGCTTTTAAGTCTGCTGTAGCTCTATGGCTCTTAAAAGGTGAGG Chrysolophus_amherstiae CATTGTTGCTT-TAAGACTGCTGTAACTCTGTGGCTCTGAAGAGGTGAGA Lophophorus_lhuysii CATTGTTGCTTCTAAGTCTGCTGTAACTCCGTGGCTCTGAAAAGGTGAGA Meleagris_gallopavo CATTGTTGCTTCTAAGTCTTCTGTGGCTCCGTGGCTCCGAAAAGGTGAGA Phasianus_colchicus CATTGTTGTTC-TTAGTCTGCTGTAACTCTGTGGCTCTGGAGAGGTGAAA Pucrasia_macrolopha CACTGTTGCTTCTAAGTCTGCTGTAACTCCATGGCTCTGAAAAGGTGAGA Syrmaticus_reevesii CACTGTTGCTT-TAAGTCTGCTGTAACTCCGTGGCTCTGAAGAGGTGAGA Tetraophasis_szechenyii CACTGTTGCTTCTAAGTCTGCTGTAACTCCGTGGCTCTGAAAAGGTGAGA Tragopan_temminckii CATTGTTGCTTCTAAGTCTGCTGTAACTCTGTGGCTCTGAAAAGGTGAGA Arborophila_ardens CGTTGTTGCTTTTAAGTCTGCTGTAGCTCTATGGCTCTTAAAAGGTGAGG Arborophila_brunneopectus CGTTGTTGCTTTTAAGTCTGCTGTAGCTCTATGGCTCTTAAAAGGTGAGG Gallus_gallus CACTGTTGCTTCTAAGCCTGCTGTAACTCCGTGGCTTTGGAAAGGCAAGG Anas_platyrhynchos -------------------------------------------------- Arborophila_rufipectus AGAAAGAAATCAACCTTCTGTAGCTGGTCTGTGTCACCCAACCAGACAAA Chrysolophus_amherstiae AGAAAAAA-TCAACCTTCTGTAACTGGCCTGTGCGACCCAACCAGATAAA Lophophorus_lhuysii AGAAAAAAATCAACCTTCTGTAGCTGGCCTGTGCGACCCGACCAGATAAG Meleagris_gallopavo AGAAAAAAATCAACCTTCTGTAGCTGGCCTGTGCAACCCAACCAGATAAA Phasianus_colchicus AGAAAAAA-TCAACCTTCTGTAACTGGCCTGTGCAACCCAACCAGATAAA Pucrasia_macrolopha AGAAAAAAATGAACGTTCTGTAGCTGGCCTGTGTGATCCAACCAGATAAA Syrmaticus_reevesii AGAAAAAA-TCAACCTTCTGTAAGTGGCCTGTGCGGCCCAACCAGATAAA Tetraophasis_szechenyii AGAAAAAA-TCAACCTTCTGTAGCTAGCCTGTGTGACCCAACCAGATAAA Tragopan_temminckii AGAAAAAAATCAACTTTCTGTAGCTGGCCTGTGTGACCCAACCAGATAAA Arborophila_ardens AGAAAGAAATCAACCTTCTGTAGCTGGTCTGTGTCACCCAACCAGACAGA Arborophila_brunneopectus AGAAAGAAATCAACCTTCTGTAGCTGGTCTGTGTCACCCAACCAGACAGA Gallus_gallus ATAAAAAAACCAACCGTCTATAGCTGGTCTGTGGGACCCAACCAGATAAA Anas_platyrhynchos -----------AACACTCTTTAGCTTGACTGTGATAACCAACCAGAGACA Arborophila_rufipectus TACTGTCAGCTCAACACATTATCACCAAAATTGAAGAGGTTGAGATTAAT Chrysolophus_amherstiae TCCCATCAGCTCAACACACTATCACCAAAATTGAAGAGGTTAAGATTAAT Lophophorus_lhuysii TCCCGTCAGCTCAACACATTATCACCAAAATTGAAGAGGTTGAGATTAAT Meleagris_gallopavo TCCCGCCAGCTCAACACATTATCACCAAAATTGAAGAGGTTGAGATTAAT Phasianus_colchicus TCCCGTCAGCTCAACACATTATCACCAAAATTGAAGAGGCTGAGATTAAT Pucrasia_macrolopha TCCCGTCAGCTCAACACATTATCACCAAAATTGAAGAGGTTGGGATTAGT Syrmaticus_reevesii TCCCGTCAGCTCAACACATTATCACCAAAATTGAAGAGGTTGAGATTAAT Tetraophasis_szechenyii TCCTGTCAGCTCAACACATTATCACCAAAATTAAAGAGGTTGAGATTAAT Tragopan_temminckii TCCCGTCAGCTCAACACATTATCACCAAAATTGAAGAGGTTGAGATTAAT Arborophila_ardens TACTGTCAGCTCAACACATTGTCACCAAAATTGAAGAGGTTGAGATTGAT Arborophila_brunneopectus TACTGTCAGCTCAACACATTGTCACCAAAATTGAAGAGGTTGAGATTGAT Gallus_gallus TCCCATCAGCTCAACACATTATCACCAACACTGAAGAGGTTGAGATTAAT Anas_platyrhynchos TTCAATCAGCTCAACACATTCTCACCAAGAGTGAAGAGGGTGTGATTCCT Arborophila_rufipectus ACTAGAGACCAGAGGCTTCTGACTTACCAGAATGCAGCCACCACTGAGAT Chrysolophus_amherstiae ACCAGAGACCAGAGGCTTCTGACTTACCAGAATGCATCCACCTTTGAGAT Lophophorus_lhuysii ACTAGAGACCAGAGGCT--CGACTTATCAGAATGCAGCCACTACTGCAAT Meleagris_gallopavo ACTAGAGACCAGAGGCTTCTGACTTACCAGAATGCAGCCACCTCTGAGAT Phasianus_colchicus ACCAGAGACCAGAGGCTTCTGACTTACCAGAATGCAGCCACCTTTGAGAT Pucrasia_macrolopha AGTGGAGACCAGAGGCTTCTGACTTACCAGAATGCAGCCACACTAGAGAT Syrmaticus_reevesii ACCAGAGACCAGAGGCTTCTGACTTACCAGAATGCAGCCACCTTTGAGAT Tetraophasis_szechenyii ACTAGAGA---GGCTTC--TGACTTACCAGAATGCAGCCACTACTGCAGA Tragopan_temminckii ACTAGAGACAAGAGGCTCGACACTTACCAGAATGCGGCCACTACTGTCAA Arborophila_ardens ACTAGAGACCAGAGGCTTCTGACTTACCAGAATGCAGCCACTACTGAGAT Arborophila_brunneopectus ACTAGAGACCAGAGGCTTCTGACTTACCAGAATGCAGCCACTACTGAGAT Gallus_gallus ACTAGAGACCAGAGGCTTCTGACTTACCAGAATGCAACCACTACTGAGAT Anas_platyrhynchos ACGAGAGACTAGCAACGTACAATTTAACAGAATGCCCCCACGGAGGATAT Arborophila_rufipectus TCTTTTAACAGTTACATTGGACAGTTTCATAAGGAGTCAAGTAACTGCTT Chrysolophus_amherstiae TCTTTTAACAGTTGTGTTGGGTAGTTC-ATAAGGACTCAAGTA------- Lophophorus_lhuysii TTTTTTAACAGCTATGT-GGACGGTTCCATAAGGACTCAAGTAATTGTTT Meleagris_gallopavo TCTTTTAACGGTTGTGTTGGACAGTTCCGCAAGGATGCAAATAATTGTTT Phasianus_colchicus TCTTTTAACAGTTGTGTTGGATAGTTCCATAAGGACTCAAGTAATTGTTT Pucrasia_macrolopha TCTTTTAACGGTTGTGTGTGGAAGTTCCGTAAGGATTCAAGTAATTGTTT Syrmaticus_reevesii TCTTTTAACAGT-GTGTTGGATAGTTC-ATAAGGACTCAAGTAATTGTTT Tetraophasis_szechenyii TCTTTTAATAGCTGTTTTGGACAGTTCCGTAAGGACTCAAGTAATTGTTT Tragopan_temminckii TCTTTTAACAGCTGTGT-GGACAGTTCCATAACGACTCAAGTAATTGTTT Arborophila_ardens TCTTTTAACAGTTACATTGGACAGTTTCATAAGGAGTCAAGTAACTGCTT Arborophila_brunneopectus TCTTTTAACAGTTACATTGGATAGTTTCATAAGGAGTCAAGTAACTGCTT Gallus_gallus TCTTTTAACAGTTGAGTTGGACAGTTCCATAAGGACTCAAGTAATTGTTT Anas_platyrhynchos CTTATTAAACGGT-TTTTGGACCGATCCCAAAAGAATCAAGCAATTGTGT Arborophila_rufipectus AAGGACAGGAAAAAGTAAAGGAATGTAATGCAGTGGCTATAATCTGCAAT Chrysolophus_amherstiae -----CAGGAAAAAGTAAAGAAATTTAGTGCAATGGATATAGACTCCAAT Lophophorus_lhuysii AAGGACAGGAAAAAGTAAAGAAATTTAATGCAGTGGATATAGGCTGCAAT Meleagris_gallopavo AAGGACTGGAAAAAGTAAAGAAATTTAATGCAATGGATATAGACTGCAAT Phasianus_colchicus AAGGACAGGAAAAAGTA-----ATTTAATGCAATGGATATAGACTGCAAT Pucrasia_macrolopha AAGAGG-GGAAAAAGTAAAGAAATTTAATGCAATGGATATAGACTGCAAT Syrmaticus_reevesii AAGGACAAGAAAAAGTAAAGAAATTTAATGCAATGGATATAGACTGCAAT Tetraophasis_szechenyii AAGGACAGAAAGAAGTAAAGAAATTTAATGCAATGGATATAGACTGCAAT Tragopan_temminckii AAGGACAGGAAAAAGTAAAGAAATTTAATGCAATGGATACAGACTGCAAT Arborophila_ardens AAGGACAGGAAAAAGTAAAGGAATGTAATGCAGTGGCTATAATCTGCAAT Arborophila_brunneopectus AAGGACAGGAAAAAGTAAAGGAATGTAATGCAGTGGCTATAATCTGCAAT Gallus_gallus AAGGACAGGAAAAAGTAAAGAAATTTAATGCAATGTATATAGACTGCAAT Anas_platyrhynchos AAGCAC-AGAACAATTATAGAAATTTAATGCACTGAATATAGCCTGCAAT Arborophila_rufipectus CTCTTTTCCTGTTTCTTACAATACAGTATTTTTAACTTCATAGAATCCCA Chrysolophus_amherstiae CTTTTTTCCTGGTTCTTACAGTACAGTATTTTTAACTTCATAGATTCACA Lophophorus_lhuysii CTTTTTTCCTGCTTCTTACAGTACAGTATTTTTAACTTCATAGAATCACA Meleagris_gallopavo CTTTTCCCCTGTTTCTTAAAGTACAGTATTTTTAACTTCATAGAATTACA Phasianus_colchicus CTTTTTTCCTGGTTCTTACAGTACAGTATTTTTAACTTCATAGAATCACA Pucrasia_macrolopha CTTTTTTCCTGTTTCTTACAGTACAGTATTTTTAACTTCATAGAATCACA Syrmaticus_reevesii CTTTTTTCCTGGTTCTTACGATACAGTATTTTTAACTTCATAGAATCACA Tetraophasis_szechenyii CTTTTTTCCTGTTTCTTACAGTACAGTATTTTCAACTTCATAGAATCACA Tragopan_temminckii CTTTTTTCCTGTTTCTTACAGTATGGTATTTTTAACTTCATAGAATCACA Arborophila_ardens CTCTTTTCCTGTTTCTCACAATACAGTATTTTTAACTTCATAGAATCCCA Arborophila_brunneopectus CTCTTTTCCTGTTTCTCACAATACAGTATTTTTAACTTCATAGAATCCCA Gallus_gallus CTTTTTTCCTGTTTCTTAGAGTACACTATTTTTAACTTCATAGAATCACA Anas_platyrhynchos CTATTGTCCTGATTCTTATACTACCGTATTTTGAACTTCATAGAATCTTA Arborophila_rufipectus GAATATCCTGAACTGGAAGAAACTGACAAAGATCACGAGCCTAGCTCCTG Chrysolophus_amherstiae GAATATCCTGAGATGGAAGAGATCCACAAGGATCACGAGCCCAGCTCCTG Lophophorus_lhuysii GAATATCCTGAGCTGGAAGGGATCCACAAGGGCCCCGAGCCCAGCTCCTG Meleagris_gallopavo GAATATCCCGAACTGGAAGAGATCCACAAGGATCACGAGCCCAGCTCCTG Phasianus_colchicus GAATATCCTGAGCTGGAAGAGATCCACAAAGATCACGAGCCCAGCTCCTG Pucrasia_macrolopha GAATATCCTGAGCTGGAAGAGATCCACAAGGATCACGAGCCCAGCTCCTG Syrmaticus_reevesii GAATATCCTGAGCTGGAAGAGATCCACAAAGATCACGAGCCGAGCTCCTG Tetraophasis_szechenyii GAATATCCTGAGCTGGAAGGGATCCACAAGGGCCCTGAGCCCAGCTCCTG Tragopan_temminckii GAATATCCTGAGCTGGAAGGGATCCACAAGGGCCCCGATCATGGAGCCCA Arborophila_ardens GAATATCCTGAACTGGAAGGGACTGACAAAGATCACGAGCCTAACTCCTG Arborophila_brunneopectus GAATATCCTGAACTGGAAGGGACTGACAAAGATCACGAGCCTAACTCCTG Gallus_gallus GAATATCCTGAGCTGGAAGGGATCCACAAGGATCACGAGCAAAGCTCCTG Anas_platyrhynchos GCATATCCGGAGCTGGAAGCGACCCTCGAGGATCACGAGTCCAACTCCAG Arborophila_rufipectus GCTCCACACAGCACCACCGCAAATCCAAACCCTGTGTCTGAGAGTGATGT Chrysolophus_amherstiae GCTCCACACAGCACCACCCCAAATCCAAAGCCTATGTCTGAGTGTGATGT Lophophorus_lhuysii GCTCCACACAGCACCATCCCAAATCCAAACCCTATGTCTGAGTGTGATGT Meleagris_gallopavo GCTCCACACAGCACCACCCCAAATCCAAACCCTATGTCTGAGTGTGATAT Phasianus_colchicus GCTCCACACAGCACCACCCAAAATCCAAAGCCTATGTCTGAGTGTGATGT Pucrasia_macrolopha GCTCCACACAGCACCACCCCTCATCCAAAGCCTATGACTGAGTGTGATGT Syrmaticus_reevesii GCTCCACACAGCTCCACCCCAAATCCAAAGCCTATGTCTGAGTGTAATGT Tetraophasis_szechenyii GCTCCACACAGCACCATCCCAAATCCAAACCCTATGTCTGAGTGTGATGT Tragopan_temminckii GCTCC--------TGGCCCCAAATCCAAACCCTGTGTCTGAGTGTGATGT Arborophila_ardens GCTCCACACAGCACCACCCCAAATCCAAACCCTGTGTCTGAGAGTGATGT Arborophila_brunneopectus GCTCCACACAGCACCACCCCAAATCCAAACCCTGTGTCTGAGAGTGATGT Gallus_gallus GCTCCACACAACACCACCCCAAATCCAAACCCTGTGTCTGAGTGTGATGT Anas_platyrhynchos GCCCCACACAGGACCACCCAAAAATCAACTCATGTGTCTGAGACCATTGT Arborophila_rufipectus CCAAACACAGCTTGAACTCTGGCACTC-TTACGCTACCTTCCTTCTTTCT Chrysolophus_amherstiae CCAAATACAGCTTGAGCTCCGGCACACCTTATGCTACCTTCCTCCTTTCT Lophophorus_lhuysii CCAAACACAGCTTGAACTCTGGCACTCCTTATGCTACCTTCCTCCTTTCT Meleagris_gallopavo ACAAACACAGCTTGAACGCTGGCATTCCTTATGCTACCTTCCTCCTTTCT Phasianus_colchicus CCAAATACAACTTGAGCTCCGGCACTCCTTATGCTACCTTCCTCCTTTCT Pucrasia_macrolopha CCAAACACAGCTTGAACTCTGGCACTCCTTATGCT----TCCTCCTTTCT Syrmaticus_reevesii CCAAATACAGCTTGAACTCCGGCAGTCCTTATGCTACCTTCCTCCTTTCT Tetraophasis_szechenyii CCAAACACAGCTTGAACTCCGGCACTCCTTATGCTACCTTCCTCCTTTCT Tragopan_temminckii CCAAACACAGCTTGAACTCTGGCACTCCTTATGCTACCTTCCTCCTTTCT Arborophila_ardens CCAAACACAGCTTGAACTCCGGCACTC-TTATGCTACCTTCCTTCTTTCT Arborophila_brunneopectus CCAAACACAGCTTGAACTCCGGCACTC-TTATGCTACCTTCCTTCTTTCT Gallus_gallus CCAAACACAGCTTGAACTCCAGCACTCCTTATGCTACCTTCCTCCTTTGT Anas_platyrhynchos CCAGACACTTCTTGAACTCCAGCA--CCTTGTGGTA----CCTTCCTTCT Arborophila_rufipectus CTAGAAAATATACACTAAAATGCAAGTGAATATATGTACTTTGGTTTTGT Chrysolophus_amherstiae CTAGAAAATATAAACTGAAACACAAGTGAATATATGTACTTTGGTTTTGT Lophophorus_lhuysii CTAGAAAATATACACTGAAACACAAGTGAATATATGTACTTTGGTTTTGT Meleagris_gallopavo CTAGAAAATATACACTGAAACACAAGTGAATATATGTACTTTGGTTTTGT Phasianus_colchicus CTAGAAAACATAAACTGAAACACGAGTGAATATATGTACTTTGGTTTTGT Pucrasia_macrolopha CTAGAAAATATACCCTGAAACACAAGTGAATATATATACTTTGGTTTTGT Syrmaticus_reevesii CTAGAAAATATAAACTGAAACACAAGTGAATATATGTACTTTGTTTTTGT Tetraophasis_szechenyii CTAGAAAATATACACTGAAACACAAGTGAATATATGTACTTTGGTTTTGT Tragopan_temminckii CTAGAAAATATACACTGAAAAACAAGTGAATATATGTACTTTGGTTTTGT Arborophila_ardens CTAGAAAATATACACTAAAATGCAAGTGAATATATGTACTTTGGTTTTGT Arborophila_brunneopectus CTAGAAAATATACACTAAAATGCAAGTGAATATATGTACTTTGGTTTTGT Gallus_gallus CTAGAAAATATACACTGAAACACAAGTGAATATATGTATTTTGGTTTTGT Anas_platyrhynchos GTAGAAAATATACACCGAAATACAAGTGGATGCATATACTTTATTTTTGT Arborophila_rufipectus TCTGAAACACTACTACTTGCAAAAGAAAGGAAGCCTTGAGAGTATTTCAG Chrysolophus_amherstiae TCTGAAACACTACCTCTTGCAAAAGAAAGGAAGCCTTGAGAGCATTTCAA Lophophorus_lhuysii TCTGAAACGCTACTTCTTGCAAAAGAAAGGAAGCCTTGAGAGTATTTCAG Meleagris_gallopavo TCTGAAACACTACTTCTTCCAAAAGAAAGGAAGCCTTGAGAGTATTTCAG Phasianus_colchicus TCTGAAACACTACCTCTTGCAAAAGAAAGGAAGCTTTGAGAGTATTTCAA Pucrasia_macrolopha TCTGAAACACTACTTCATGCAAAAGAAAGGAAGCCTTGAGAGTATTTGAG Syrmaticus_reevesii ------ACACTACCTCTTGCAAAAGAAAGGAAGCCTTGAGAGTATTTCAA Tetraophasis_szechenyii TCTGAAACACTACTTCTTGCAAAAGAAAGGAAGCCTTGAGAGTATTTCAG Tragopan_temminckii TCTGAAACACTACTTCTTGCAAAAGAAAGGAAGCCTTGAGAGTATTTCAG Arborophila_ardens TCTGAAACACTACTACTTGCAAAAGAAAGGAAGCCTTGAGAGTATTTCAG Arborophila_brunneopectus TCTGAAACACTACTACTTGCAAAAGAAAGGAAGCCTTGAGAGTATTTCAG Gallus_gallus TCCGAAACACTACTTCTTGCAAAGGAAAGGAAGCCTTGAGAGTATTTCAG Anas_platyrhynchos TCTGAAATGGTTCTTCTCACAGAAGAAAGGAAGCCTCGAGAGTATTTCAC Arborophila_rufipectus ACTGTCT------GTTCCTGAGGCTATAACTAAAATATGTGTTTTCAGTG Chrysolophus_amherstiae ACTGTCTTTTATAATTCCTGAGGGTGTAACTAAAGCGTGTTTTATGCATA Lophophorus_lhuysii ACTGTCTTTTATAGTTCCTGAGACTATAACTAAAACGTGTTTTATGCATG Meleagris_gallopavo ACTGTATTTTGTAGTTCCTGAGGCTATAACTAAAATGTGTTTTACACATG Phasianus_colchicus ACTGTCTTTTATAGTTCCTGAGGCTGTAACTAAAACATGTTTTATGCATG Pucrasia_macrolopha ACTGTCTTTTATAGTTCCTGAGGCTATAACTAAAATGTGTTTTATACATG Syrmaticus_reevesii ACTGTCTTATATAGTTCCTGAGGCTGTAACTAAAACATGTTTTATGCATG Tetraophasis_szechenyii ACTGTCTTTTATAGTTCCTGAGGCTATAACTAAAGTGTGTTTTATGCACG Tragopan_temminckii ACTGTCTTTTATAGTTCCTGAGGCTATAAGTAAAATGTGTTTTATGCATG Arborophila_ardens ACTGTCTTTTATAGTTCCTGAGGCTATAACTAAAGTATGTGTTTTCAGTG Arborophila_brunneopectus ACTGTCTTTTATAGTTCCTGAGGCTATAACTAAAGTATGTGTTTTCAGTG Gallus_gallus ATTGTCTTTTATAGTTACTGAGGCTATAACTAAAACATGTTTTATGCATG Anas_platyrhynchos AGTGTCTTTTATAGTTCCTGAAGCTACAACTAGAACATGTGTTTTCAACG Arborophila_rufipectus CAAATGAGGGTACATAAATATTTACAAATTTTGTACATAGAAAATATTTT Chrysolophus_amherstiae CAAATCAAGGGACATAAATATTTACAAATTTTGTGCATAGAAGATATTTT Lophophorus_lhuysii CAAATCAAGGGACATAAATAT-CACAAATTT-GTGCATAGAAGATATTTT Meleagris_gallopavo CAAATCAAGGGACATAAATATTTACAAATTTTGTGCACAGAAGATATTTT Phasianus_colchicus CAAATCAAGGGACATAAATATTTACAAATTTTGTGCATAGAAGATATTTT Pucrasia_macrolopha CAAATCAAGGGACATAAATATTTACAAATTTTGGGCATAGAAGATATTTT Syrmaticus_reevesii CAAATCAAGGGACATAAATATTTACAAATTTTGTGCATAGAAGATATTTT Tetraophasis_szechenyii CAAATCAAGGGACATAAATATTCACAAATTT-GTACATAGAAGATATTTT Tragopan_temminckii CAAATCAAGGGACATAAATATTTACAAATTTTGTGCATAGAAGATATTTA Arborophila_ardens CAAATGAGGGGACACAAATATTTACAAATTTTGTACATAGAAAATATTTT Arborophila_brunneopectus CAAATGAGGGGACACAAATATTTACAAATTT-GTACATAGAAAATATTTT Gallus_gallus CAAATCAAGGAACATAAATATTTACAAATTTTGTGCATAGAAGATATTTT Anas_platyrhynchos TACATCAAGGGACATAACTATTTACATATTTTGCTCATAAAAGATTTTTT Arborophila_rufipectus ACCAAAACCAGTGGAGTTCTTGGCACTATGCGAGACACTTCTGACACTCT Chrysolophus_amherstiae ATCAAAACTGGTGGAGTTCTCAGTACTATGCAAGATACTTTTGACACTCT Lophophorus_lhuysii ATCAAAACTGGTGGAGTTCTCGGCACTATGCAAGATACTTTTGACACTCT Meleagris_gallopavo ATCAAAACTGGCGGAGTTCTCGGCACTATGCAAGATACTTTTGACACTCT Phasianus_colchicus ATCAAAACTGGTGGAGTTCTCAGTACTATGCAAGATACTTTTGACACTCT Pucrasia_macrolopha ATCAAAACTGGTGGAGTTCTCGGCACTATGCAAGATACTTTTGACACTTT Syrmaticus_reevesii ATCAAAACTGCTGGAGTTCTCGGTACTATGCAAGATACTTTTGACACTCT Tetraophasis_szechenyii ATCAAAACTGGTGGAGTTCTCGGCACTATGCAAGATACTTTTGACACTCT Tragopan_temminckii ATCAAAACTGCTGGAGTTGTCA-TACTGTGCA-GATACTTTTGACACTCC Arborophila_ardens ACCAAAACCAGTGGAGCTCTTGGCACTATGCAAGATACTTCTGACACTCT Arborophila_brunneopectus ACCAAAACCAGTGGAGCTCTTGGCACTATGCAAGATACTTCTGACACTCT Gallus_gallus ACCAAAACCAGTGGAGTTATTGGCACTATACAAGATACTTTTGACACT-- Anas_platyrhynchos A-CAAAAGCAGTGGAG---TCAGCACTAGGCAAGATACTTCTGACACTCT Arborophila_rufipectus GCTGTCATTCCTGACTCACTTGAGA------GAAGAACAC--TGAGTTGG Chrysolophus_amherstiae GCTGTCATTCCTGACTCACTTGAACATTTACATAGAACACCCTGAGTTGG Lophophorus_lhuysii GCTGTCATTCCTGACTCACTTGAACATTTACATAGAACACCCTGAGTTGG Meleagris_gallopavo GCTGTCATTCCTGACTCACTTGAACATTTATATAGAACACCCTGAGTTGG Phasianus_colchicus GCTGTCATTCCTGACTCACTTGAACATTTACATAGAACACTCTGAGTTGG Pucrasia_macrolopha GCTGTCATTCCTGAATCACTTGAACATTTACGTAGAACACCCTGAGTTGG Syrmaticus_reevesii GCTGTCATTCCTGACTCACTTGAACATTTACATAGAACACCCTGAGTTGG Tetraophasis_szechenyii GCTGTCATTCCTGACTCACTTGAACATTTACATAGAACACCCTGAGCTGG Tragopan_temminckii GCTGTCATTCCTGACTCACTTGAACATTTACATAGAACACCCTGACTTGG Arborophila_ardens GCTGTCATTCCTGACTCACTTGAGA------GAAGAACAC--TGAGTTGG Arborophila_brunneopectus GCTGTCATTCCTGACTCACTTGAGA------GAAGAACAC--TGAGTTGG Gallus_gallus GCTGGCTTTCCTGACTCACTTGAACATTTACATAGAACACCCCAAGTTGG Anas_platyrhynchos TCTATCACTTCTGAGTCACTTGGACATTTACAAATAATATCATGAGCTGC Arborophila_rufipectus AAGGGACCAACAAAAACCATGGAGTGCTGGTTCCACACAGTACCACCCAA Chrysolophus_amherstiae AAGGGACCTACAAACACCATCAAGTCCTGCTTTCACACAGTACCACCCAA Lophophorus_lhuysii AAGGGACCTACAAGAACCATCGAATCCTGGTTCCACACAGTACCACCCAA Meleagris_gallopavo AAGGGACCTACAAGAATCATCGAGTCCTGGTTCCACACAGTACCACCCAA Phasianus_colchicus AAGGGACCTACAAGAATCATCAAGTCCTGCTTTCACACAGTACCACCCAA Pucrasia_macrolopha AAGGGACCTACAAAAACCATTGAATCCTGCTTCCACACAGT-------GA Syrmaticus_reevesii AAGGGACCTACAAGAACCATCAAGTCCTGCTTTCACACAGTACCACCCAA Tetraophasis_szechenyii AAGGGACCTACAAGAACCATTGAGTCCTGGTTCCACACAGTACCACCCAA Tragopan_temminckii AAGGGATCTACAAGAACCACTGAGTCCTGGTTCCACACATTACCACCCAA Arborophila_ardens AAGGGACCTACAAAAACCATGGAGTGCTGGTTCCACGCAGTACCACCCAA Arborophila_brunneopectus AAGGGACCTACAAAAACCATGGAGTGCTGGTTCCACGCAGTACCACCCAA Gallus_gallus AGGGGACCTACAAGAACCATCGAGTCCTGGTTCCACACAGTACCACCCAA Anas_platyrhynchos AAGGAACCCACAAGGATCACTGAGTCCTGGCTCCACAT------------ Arborophila_rufipectus ACCCTACAGCTGATGAGTGATGTCCCGGCGCTCCCTGAGCTCCGGCATCG Chrysolophus_amherstiae ACCCTACAGCTGA-GAGTGGT-TCCCAGCTCTCCATAAGCTCTGGCATCA Lophophorus_lhuysii ACCCTACAGCTGA-GAACGGTGTCCCAGCTCTCGCTGAGCTCTGGCATCA Meleagris_gallopavo ATGCTACAGCTGA-GAGCGGTGTACCAGCTCTCCCTGAACTCTGGCA--- Phasianus_colchicus ACCCTACAGCTGA-AAGTGGT-TCCCAGCTCTCCCTAAGCTCTGGCATCA Pucrasia_macrolopha ACCCTACAGCTGA-GAGCGGTGTCCCAGCTCTCCCTGAGCTCTGGCATCA Syrmaticus_reevesii ACCCTACAGCTGA-GAGTGGT-TCCCAGCTCTCCCTAAGCTCTGGCATCA Tetraophasis_szechenyii ACCCTACAGCTGA-GAGCAGTGTCCCAGCTCTCACTGAACTCTGGCATCA Tragopan_temminckii ACCCTACAGCTGA-GAGCGGTGTACCAGCTCTCGCTGAGCTCTGGCATCA Arborophila_ardens ACCCTACAGCTGATGAGTGACGTCCCAGCGCTCCCTGAGCTCCAGCATCA Arborophila_brunneopectus ATCCTACAGCTGATGAGTGACGTCCCAGCGCTCCCTGAGCTCCAGCATCA Gallus_gallus ACCCTGTATATGA-GAGCAGTGTCCCAGCTCTCCCTGAGCTCTGGCATCA Anas_platyrhynchos ------------------------------------------TGGTG--- Arborophila_rufipectus GGGCTGTGCCCATTGCCCTGGGCAGCTGCTCCATGCCTGACACCCTCTGG Chrysolophus_amherstiae GGGCCATGCCCATTGCCCTGGGCAGCCGTTCCATGCCCACCACCCTCTGG Lophophorus_lhuysii GGGCCGTGCCCACTGCCCTGGGCAGCTGCTCCATGTCCACCACTCTCTGG Meleagris_gallopavo ------------------------GCTGCTTCATGCCCACCTCCCTCTGG Phasianus_colchicus GGGCCATGCCCATTGCCCTGGGCAGCTGTTCCATGCCCACCACCCTCTGG Pucrasia_macrolopha GGGCTGTGCCCACTGCCCTGGGCAGCTTCTCCATGTCCACCACTCTCTGG Syrmaticus_reevesii GG-CCATGCCCATTGCCCTGGGCAGCTGTTCCATGCCCACCACCCTCTGG Tetraophasis_szechenyii GGGCCGTGCCCACTGCCCTGGGCAGCTGCTCCATGCCCACCGCCCTCTGG Tragopan_temminckii GGGCCATGCCCACTGGCCTGGGCAGCTGCTTCATGCCCACCGTCCTCTGG Arborophila_ardens GAACTGTGCCCAGTGCCCTGGGCAGCTGCTCCATGCCCAACACCCTCTGG Arborophila_brunneopectus GAACTGTGCCCAGTGCCCTGGGCAGCTGCTCCATGCCCAACACCCTCTGG Gallus_gallus GGGCTGTGCCCACTGCCCTGGGCAGCTACTCCATGCCCACCACCCTCTGG Anas_platyrhynchos -------------------------------------------------- Arborophila_rufipectus GGGAGAACCTTTCCCCAGCCCCCCACCTGGCCCT-CTCTGACGCAGCTCC Chrysolophus_amherstiae AGCAGAACCTTTCCCTGACCACC--CCTGACCGTACCCTGATGCAGCTCC Lophophorus_lhuysii GGCAGAACCTTTCCCTGACCCCC--CCTGACCGTACCCTGACACAGCTTC Meleagris_gallopavo GGCAGAACCTTTCCCTGACCACC--CCCGAC-ATAGCCTGATGCAGCTCC Phasianus_colchicus AGCAGAACCTTTCCCTGACCATC--CCTGACCGTACCCTGATGCAGCTCC Pucrasia_macrolopha GGCAGAACCTTTCCCTGACCCCC--CCTGACCATACCCTGATGCAGCTCC Syrmaticus_reevesii AGCAGAACCTTCCCCTGACCACC--CCTGACCGTACCCTGATGCAGCTCC Tetraophasis_szechenyii GGCAGAACCTTTCCCTGACCCCC--CCTGACCGTACCCTGATGCAGCTCC Tragopan_temminckii GGCAGAACCTTTCCTTGACCCCC--CCTGACCGTACCCTGACGCAGCTCC Arborophila_ardens GGGAGAACCTTTCCCCAGCCCCC-ACCTGACCCT-CCCTGACGCAGCTCC Arborophila_brunneopectus GGGAGAACCTTTCCCCAGCCCCC-ACCTGACCCT-CCCTGACGCAGCTCC Gallus_gallus GGAAGAACCTTTCCCTGACCCCA--CCTG-----------------CTCC Anas_platyrhynchos -------------------------------------------------- Arborophila_rufipectus ATGTCATTCCCTCGGCTCCTGTCACTGTCACCAGGGAGCAGAGATCAGCA Chrysolophus_amherstiae ATGTTGTTCC-TCAGCTCCTGTCACTGCCACCAGAGAGCAAAGATCAGCA Lophophorus_lhuysii ATGTCGTTCC-TCAGCTCCTGTCACTGTCACCAGAGAGCAAAGATCAGCA Meleagris_gallopavo ATGTCGTTCC-TCAGCTCCAGTCACTGTCACCAGAGGGCAAAGATCAGCA Phasianus_colchicus ATGTCGTTCC-TCAGCTCCTGTCACTGCCACCAGAGAGCAAAGATCAGCA Pucrasia_macrolopha ATGTCGTTCC-TCAGCTCCTGTCACTGTCACCAGAGAGCAAAGATCAGCA Syrmaticus_reevesii ATGTTGTTCC-TCAGCTCCTGCCACTGCCACCAGAGAGCAAAGATCAGCA Tetraophasis_szechenyii ATGTCGTTCC-TCAGCTCCTGTCACTGTCACCAGAGAGCAAAGATCAGCA Tragopan_temminckii ATGTTGTTCC-TCAGCTCCTGTCACTCTCACCAGAGAGCAAAAATCAGCA Arborophila_ardens ATGTCATTCCCTCGGCTCCTGTCACTGTCACCAGGGAGCAGAGATCAGCA Arborophila_brunneopectus ATGTCATTCCCTCGGCTCCTGTCACTGTCACCAGGGAGCAGAGATCAGCA Gallus_gallus ATGTCATTCC-TCAGCTCCTGTCACTGTCACCAGAGAGCAGGGATCAGCA Anas_platyrhynchos ----------------TCTTATCACTGTTACCAGAAAGAGGAGATCAGCG Arborophila_rufipectus CCTGCCCCTCTACAGTACATTAGTGTCTTAAAATAATGATTGCTGTTTCA Chrysolophus_amherstiae CCTGCTCCTCTACAGTACATTAATGTCTTAAAATAATGATTGCTGTTTCA Lophophorus_lhuysii CCTGCTCCTCTACAGTACATTAATGTCTTAAAATAATGATTGCTGTTTCA Meleagris_gallopavo CCTGCTCCTCTACAGTACATTAATGTCTTAAAATAATGATTGCTGTTTCA Phasianus_colchicus CCTGCTCCTCTACAGTACATTAATGTCTTAAAATAATGATTGCTGTTTCA Pucrasia_macrolopha CCTGCTCCTCTATAGTACATTAATATCTTAAAATAACGATTGCTGTTTCA Syrmaticus_reevesii CCTGCTCCTCTACAGTACATTAATGTCTTAAAATAATTATTGCTGTTTCA Tetraophasis_szechenyii CCTGCTCCTCTACAGTACATTAATATCTTAAAATAATGATTGCTGTTTCG Tragopan_temminckii CCTGCTCCTCTACAGGACATTAATGTCTTAAAATAATGATTGCTGTTTCA Arborophila_ardens CCTGCCCCTCTACAGTACATTAGTGTCTTAAAATAATGATTGCTGTTTCA Arborophila_brunneopectus CCTGCCCCTCTACAGTACATTAGTGTCTTAAAATAATGATTGCTGTTTCA Gallus_gallus CCTGCCCCTCTACAGTACATTAATGTCTTAAAATAATGATTGCTGTTTCA Anas_platyrhynchos CCTGCCCCTCTGCAGTGCATTAATGTCTTAAAATAATGATAGCTGTTTCA Arborophila_rufipectus TAATTCAGCAGGCTCTAACAGGGAATGATAGCAAGGGTATAAGGGATGTT Chrysolophus_amherstiae TAATCTAGCAGGCTCTAACAGGGAATGATAGSAAGGGTATAA-GGGCGTT Lophophorus_lhuysii TAATCTAGCAGGCTCTAACAGGGAATGATAGCAAGGGTATAA-GGGCGTT Meleagris_gallopavo TAATCTTGCAGGCTCTAACAGGGAATGATAGCAAGGGTATAA-GGGCGTT Phasianus_colchicus TAATCTAGCAGGCTCTAACAGGGAATGATAGCAAGGGTATAAAGGGCGTT Pucrasia_macrolopha TAATCTAGCAGGCTCTAACAGGGAATGATAGCAAGGGTATAA-GGGCGTT Syrmaticus_reevesii TAATCTAGCAGGCTCTAACAGGGAACGATAGCAAGGGTATAA-GGGCGTT Tetraophasis_szechenyii TAATCTAGCAGGCTCTAACAGGGAATGATAGCAAGGGTATAA-GGGCGTT Tragopan_temminckii TAATCTAGCAGGCTCTAACAGGGAATGATAGCAAGGG---------CGTT Arborophila_ardens TAATTCAGCAGGCTCTAACAGGGAATGATAGCGAGGGTATAAGGGATGTT Arborophila_brunneopectus TAATTCAGCAGGCTCTAACAGGGAATGATAGCGAGGGTATAAGGGATGTT Gallus_gallus TAATCTAGCAGGCTCTAACAGGGAATGATAGCAAGGGTATAA-GGGCGTT Anas_platyrhynchos TAATCTAGCAGGCTCTG-CAGGAAATGATAGCAAGGGTATATGGGACATA Arborophila_rufipectus ACTTAGGAATGGTGTGAAGTTAATTACATAAGGAATGTGAGGCCACAAGG Chrysolophus_amherstiae ACTTAGGAATGGTGTGAAGTTAATTACATAGGGAATGTGAGGACACAAGG Lophophorus_lhuysii ACTTAGGAATGGTGTGAAGTTAATTACATAGGGAATGTGAGGCCACAAGG Meleagris_gallopavo ACTTAGGAATGGTGTGAAGTTAATTACATAGGGAATGTGAGGCCACAAGG Phasianus_colchicus ACTTAGGAATGGTGTGAAGTTAATTACATAGGGAATGTGAGGACACAAGG Pucrasia_macrolopha ACTTAGGAATGGTGTGAAGTTAATTACATAGGGAATGTGAGGCCACAAGG Syrmaticus_reevesii ACTTAGGAATGGTGTGAAGTTAATTACATAGGGAATGTGAGGACACAAGG Tetraophasis_szechenyii ACTTAGGAATGGTGTGAAGTTAATTACATAGGGAATGTGAGGCCACAAGG Tragopan_temminckii ACTTAGGAATGGTGTGAAGTTAATTACATAGGGAATGTGAGGCCACAAGG Arborophila_ardens ACTTAGGAATGGTGTGAAGTTAATTACATAAGGAATGTGAGGCCACAAGG Arborophila_brunneopectus ACTTAGGAATGGTGTGAAGTTAATTACATAAGGAATGTGAGGCCACAAGG Gallus_gallus ACTTAGGAATGGTGTGAAGTTAATTACATAAGGAATGTGAGGCCCCAAGG Anas_platyrhynchos ACTTAGGAGTGGTGTGAAGT----TATATAAGGAGTGTGAAGCCACAAGG Arborophila_rufipectus CCTGCTGAGATACCTTGGGAGGGCTGTGCTGGGCTCTAATGCAGCCCCAT Chrysolophus_amherstiae CCTGCTGAGATACCTTGGGAAGGCTGTGCTGGGCTCTAATGCAGCCCCAT Lophophorus_lhuysii CCTGCTGAGATACTTTGGGAGGGCTGCGCTGGGCTCTAATGCAGCCCCAT Meleagris_gallopavo CCTGCTGAGATACCTTGGAAGGGCTCTGCTGGGCTCTAATGCAGCCCCAT Phasianus_colchicus CCTGCTGAGATACCTTGGGAAGGCTGTGCTGGGCTCTAATGCAGCCCCAT Pucrasia_macrolopha TCTGCTGAGATACCTTGGGAGGGCTGTGCTGGGCTCTAATGCAGCCCCTT Syrmaticus_reevesii CCTGCTGAGATACCTTGGGAAGGCTGTGCTGGGCTCTAATGCAGCCCCAT Tetraophasis_szechenyii CCTGCTGAGATACCTTGGGAGAGCTGTGCTGGGCTCTAATGCAGCCCCAT Tragopan_temminckii CCTGCTGAGATACCTTGGGAAGGCTGTGCTGAGCTCTAATGCAGCCCCAT Arborophila_ardens CCTGCTGAGATACCTTGGGAGGGCTGTGCTGGGCTCTAATGCAGCCCCAT Arborophila_brunneopectus CCTGCTGAGATACCTTGGGAGGGCTGTGCTGGGCTCTAATGCAGCCCCAT Gallus_gallus CCTGTTGAGATACCTTGGGAGGGCTGTGCTGGGCTCTAATGCAGCCCCAT Anas_platyrhynchos CCTGTTGAGATAGTATGGGAGGATTGTTCTGGGCTGTAATGCAGCCTTAT Arborophila_rufipectus CTGTACAGCCTATAAATAGAACTGCTGGAGTGATCTTTCCCTCAATCTGC Chrysolophus_amherstiae CTGTACAGCCTATAAATAGAGCTGCTGGAGTGATCTTTCCCTCAAGCTGC Lophophorus_lhuysii CTGTACAGCCTATAAATAGAGCTGCTGGAGTGATCTTTCCCTCAAGCTGC Meleagris_gallopavo CTGTACAGCCTATAAATAGAGCTGCTGGAGTGATCTTTCCCTCAAGCTGC Phasianus_colchicus CTGTACAGCCTATAAATAGAGCTGCTGGAGTGATCTTTCCCTCAAGCTGC Pucrasia_macrolopha CTGTACAGCCTATAAATAGAGCTGCTGGAGTGATCTTTCCCTCAAGCTGC Syrmaticus_reevesii CTGTACAGCCTATAAATAGAGCTGCTGGAGTGATCTTTCCCTCAAGCTGC Tetraophasis_szechenyii CTGTACAGCCTATAAATAGAGCTGCTGGAGTGATCTTTTCCTCAAGCTGC Tragopan_temminckii CTGTACAGCCTATAAATAGAGCTGCTGGAGAGATCCTTCCCTCAAGCTGC Arborophila_ardens CTGTACAGCCTATAAATAGAGCTGCTGGAGTGATCTTTCCCTCAATCTGC Arborophila_brunneopectus CTGTACAGCCTATAAATAGAGCTGCTGGAGTGATCTTTCCCTCAATCTGC Gallus_gallus CTGTACAGCCTATAAATAGAGCTGCTGGAGTGATCTTTCCCTCAAGCTGC Anas_platyrhynchos CCATACAGCCTATAAATAGAGCTGCTGCAGTGATCTTTCCCCCAAGCTGT Arborophila_rufipectus TCCTGGGATTTGCTTCAGATCAAGCCACTTTGGACACTCAGAGACCATGC Chrysolophus_amherstiae TCCTGGGATTTGCTTCAGATCAAGCCACTTTGGACACTCAGAGACCATGC Lophophorus_lhuysii TCTTGGGATTTGCTTCAGATCAAGCCACTTTGGACACTCAGAGACCATGC Meleagris_gallopavo TCCTGGGATTTGCTTCAGATCAAGCCACTTTGGACACTCAGAGACCATGC Phasianus_colchicus TCCTGGGATTTGCTTCAGATCAAGCCACTTTGGACACTCAGAGACCATGC Pucrasia_macrolopha TCATGGGATTTGCTTCAGAGCAAGCCACTTTAGATACTCAGAGACCATGC Syrmaticus_reevesii TCCTGGGATTTGCTTCAGATCGAGCCACTTTGGACACTCAGAGACCATGC Tetraophasis_szechenyii TCCTGGGATTTGCTTCAGATCAAGCCACTTTGGACACTCAGAGACCATGC Tragopan_temminckii TCCTGGGATTTGCTTCAGATCAAGCTACTTTGGACACTCAGAGACCATGC Arborophila_ardens TCCTGGGATTTGCTTCAGATCAAGCCACTTTGGACACTCAGAGACCATGT Arborophila_brunneopectus TCCTGGGATTTGCTTCAGATCAAGCCACTTTGGACACTCAGAGACCATGC Gallus_gallus TC-TGGGATTTGCTTCAGATCAAGCCACTCTGGTCACTCAGAGACCATGC Anas_platyrhynchos TCCTGGGATTTCCTTCAGATCAAGCCACTTTGGACACTCAGAGACCATGC Arborophila_rufipectus TCAGGGACACTCACATTTCTGCAGTGATCTGGAATGGCAGTGGTTATGGC Chrysolophus_amherstiae TCAGGGACACTCATATTTCTGCAGCGGTTTCCTGGGGTAGTGGTCATGGC Lophophorus_lhuysii TCAGGGACACTCGTATTTCTGCAGTGATTTCCCAGGGCAGTGGTCATGGC Meleagris_gallopavo TCAGGGACACTCGTATTTCTGCAGTGATTTCCCAGGGCACTGGTCATGGC Phasianus_colchicus TCAGGGACACTCATATTTCTGCAGCGATTTCCCAGGGCAGTGGTCATGGC Pucrasia_macrolopha TCAGGGACACTCATATTTCTGCAGTGATTTCCCAGGACAGTGGTCATGGC Syrmaticus_reevesii TCAGGGACACTCATATTTCTGCAGCGATTTCCCAGGGCAGTGGTCATGGC Tetraophasis_szechenyii TCAGGGACACTCGTATTTCTGCAGTGATTTCCCAGGGCAGTGGTCATGGC Tragopan_temminckii TCAGGGACACTCGTATTTCTGCAGTGATTTCCCAGGGCAGTGGTCATGGC Arborophila_ardens TGAGGGACACTCACATTTCTGCAGTGATCTGGAATGGCAGTGGTCATGGC Arborophila_brunneopectus TGAGGGACACTCACATTTCTGCAGTGATCCTGGTTGGCAGTGGTCATGGC Gallus_gallus TCAGGGACACTCATATTTCTGCAGTGATTTCCCAGGGCAGTGGTCGTGGC Anas_platyrhynchos TCAGGGACTATCATGTATCTTCAGCGATTTTTCTAGGAAGTGGTCGTGGC Arborophila_rufipectus CCCGAGCTGCTGGAGTTCAAGAAACATTTGTGCAATGCTGTCATACACAC Chrysolophus_amherstiae CCCAAACTGCTGGAGTTCAAGAAGCATTTGGACAACACTCTCATACACAC Lophophorus_lhuysii CCCAAGCTGCTGGAGTTCAAGAAACATTTGGGCAACGCTGTGATACACAC Meleagris_gallopavo GCCAAACTGCTGGAGTTCAAGAAACATTTGGGCAACCCTCTCATATGCAC Phasianus_colchicus CCCAAGCTGCTGGAGTTCAAGAAACATTTGGGCAACGCACTCATACACAC Pucrasia_macrolopha CCCAAGCTGCTGGAATTCAAGAAACCTTTGGACAACACTCTCATACACAC Syrmaticus_reevesii CCCAAGCTGCTGGAGTTCAAGAAGCATTTGGGCAACACTCTCATACACAC Tetraophasis_szechenyii CCCAAGCTGCTGGAGTTCAAGAAACATTTGGGCAACACTCTCATACACAC Tragopan_temminckii CCCAAGCTGCTGGAGTTCAAGAAACATTTGGGCAACACTCTCATGCACAC Arborophila_ardens CCCGAGCTGCTGGAGTTCAAGAAGCATTTGGGCAATGCTCTCATACACAC Arborophila_brunneopectus CCCGAGCTGCTGGAGTTCAAGAAGCATTTGGGCAATGCTCTCATACACAC Gallus_gallus TCCAAGCTGCTGGAGTTCAAGAAACATTTGGACAGCGCTCTCATACACAC Anas_platyrhynchos ACCAATCTGCTGGATTTCAAGAACTATTTGGTATCATCGTTAATAAGCAC Arborophila_rufipectus AGTTTGATTTGGTGTGGCCCTGT--GGAGCCGGGAGTTGGACTTGCTGAT Chrysolophus_amherstiae AATTTCATTTTGTGTGGCCCTGTGTGGAGCCAGAAGTTGGACTTGGTGAT Lophophorus_lhuysii AATTTGATTTTGTGTGGCCCTGTGTGGAGCTGGGAGTTGGACTCGGTGAT Meleagris_gallopavo AATTTGATTTTGTGTGGCCCTGTGTGGAGTCGGGAGTTGGACTCAGTGAT Phasianus_colchicus AATTTCATTTTGTGTGGCCCTGTGTGGAGCCAGAAGTTGGACTCGGTGAT Pucrasia_macrolopha AATTTGATTTTGTGTGGCCCTGTGTGAAGTCGGGAGTTGGACTCAGTGAT Syrmaticus_reevesii AATTTCATTTTGTGTGGCCCTGTGTGGAGCCAGAAGTGTGATTTGGTGAT Tetraophasis_szechenyii AGTTTGATTTTGTGTGGCCCTGTGTGGAGCTGGGAGTTGGACTCGGTGAT Tragopan_temminckii AATTTGATTTTGTGTGGCCCTGTGTGGAGCCAGAAGTTGGACTCGGTGAT Arborophila_ardens AGTTTGATTTGGTGTGGCCCTGT--GGAGCCGGGAGTTGGACTTGCTGAT Arborophila_brunneopectus AGTTTGATTTGGTGTGGCCCTGT--GGAGCCGGGAGTTGGACTTGCTGAT Gallus_gallus AATTTGATTTTGTGTGGGCCTGTGTGGAGCCAGGAGTTGGACTCGGTGAT Anas_platyrhynchos ATTTT----------------------------------GAATCAGTGAT Arborophila_rufipectus CCTTGTGGACCCTTTCCAACCTGTGGTGGTCTATGATTTTTTTGTTAATT Chrysolophus_amherstiae CCTTGTGGATCTCTTTCAATCTCTGGTAGTATATAATTTTTCTGATAACT Lophophorus_lhuysii CCTTGTGTATCCCTTTCAATCTGTGGTGGTATATGATTTTTGTGATAATT Meleagris_gallopavo CCTTGTGGATCCCTTTCAATCT---GTGGTATATGATTTTT-TGATAATT Phasianus_colchicus CCTTGTGGATCCCTTTCAATCTCTGGTAGTATATAATTTTTCTGATAATT Pucrasia_macrolopha CCTTGTGGATCCCTTTCAATCT---GTGGCATATGATTTTTGCGATAATT Syrmaticus_reevesii CCTTGTGGATCTCTTTCAATCTCTGGTAGTATATAATTTTTCTGATAATT Tetraophasis_szechenyii CCTTGTGGATCCCTTTCAATCTGTGGTGGCATATGATTTTTGTGATAATT Tragopan_temminckii CCTTGTGGATTCCTTTCAATCTGTGGTGGTATATGATTTTTGTGATAATT Arborophila_ardens CCTTGTGGACCCTTTCCAACCTGTGGTGGTCTATGATTTTTTTGTTAATT Arborophila_brunneopectus CCTTGTGGACCCTTTCCAACCTGTGGTGGTCTATGATTTTTTTGTTAATT Gallus_gallus CCTTGTGGATCCCTCCCAACCTGTGGTGGTCTATGATTTTTGTGATAATT Anas_platyrhynchos ----------------------------GTCCATTATTTTTGAGATAAGT Arborophila_rufipectus TTAAAGCTACTTACTTTTTTTTCCCTTCTTATTCTTATATGGAAAACCAG Chrysolophus_amherstiae TTAAAGCTACTTTCTTTTTTTTCC-TTCTTGTTCTTATATGGAAAACTTG Lophophorus_lhuysii TTAAAGCTACTTTCTTTTTTTTCCCTTCTTGTTCTTATATGGAAAACTTA Meleagris_gallopavo TTAAAGCTACTTTCTTTTTTTTCC-TTCTTGTTCTTATATGGAAAGCTAG Phasianus_colchicus TTAAAGCTACTTTCTTTTTTTTCC-TTCTTGTTCTTATATGGAAAACTTG Pucrasia_macrolopha TTAAAGCTACTTTTTTTTTTTTTT-TTCTTGTTCTTATATGGAAAACTTG Syrmaticus_reevesii TTAAAGCTACTTTCTTTTTTTTCCCTTCTTGTTCTTATATGGAAAACTTG Tetraophasis_szechenyii TTAAAGCTACTTTCTTTTTTTTCC-TTCTTGTTCTTATATGGAAAACTTA Tragopan_temminckii TTAAAGCTACTTTCTTTTTTTTCC-TTCTTGTTCTTATATGGAAAACTTG Arborophila_ardens TTAAAGCTACTTACTTTTTTTTCC-TTATTATTCTTATATGGAAAACGAG Arborophila_brunneopectus TTAAAGCTACTTACTTTTTTTTCC-TTATTATTCTTATATGGAAAACGAG Gallus_gallus TTAAAGCTACTTTCTTTTTTGTCTCATCTTGTTTTTATATGGAAAACTAG Anas_platyrhynchos TTAAAGCTGCCTTTTTTTTTTCTT--------TCTCATGTGGGAAATCTA Arborophila_rufipectus CT-GAGTGAAGCCTTTGAAGTCAAATATGCCTGTTTACATCTGATGTGCA Chrysolophus_amherstiae CTTGGGTTAAACCTTTGAAGTCAAGCATGCCTGTATA-ATCTGATGTGCA Lophophorus_lhuysii TT-GGTTTAAACCTTTGAAGTCAAGCATGCCTGTATA-ATCTGATGTGCA Meleagris_gallopavo CT-AGATTAAACCTGTGAAGTCAAGCATGCCTGTATACATCTGATGTGCA Phasianus_colchicus CT-GGGTTAAACCTTTGAAGTCAAGCATGCCTGTATA-ATCTGATGTGCA Pucrasia_macrolopha CT-AGGTTAAACCTTTCAAGTCAAGCATGCCTGTGTACATCTGAGGTGCA Syrmaticus_reevesii CTTCTTTTGCAAGCTCTAAGTCAAGCATGCCTGTATA-ATCTGATGTGCA Tetraophasis_szechenyii CT-GGGTTAAACCTTTTAAGTCAAGCATGCCTGTATA-ATCTGATATGCA Tragopan_temminckii CT-GGGTTAAACCTTTGAAGTCAAGCATGCGTGTATA-ATCTGATGTGCA Arborophila_ardens CT-GAGTGAAGCCTTTGAAATCAAATATGCCTGTTTACATCTGGTGTGCA Arborophila_brunneopectus CT-GAGTGAAGCCTTTGAAGTCAAATATGCCTGTTTACATCTGGTGTGCA Gallus_gallus CT-GGGTGAAACCTTTGAAGTCAAGCATGCCTGTATACATCTGATTTACA Anas_platyrhynchos GCTAGGTGAAAATTCTGAAGTCAGGCATGTCTGTGTACATGTGACCTGCA Arborophila_rufipectus GTTGAGTGCTTGTACAGCATAGTGCTGGAACTTGTGCTGGATCTGACTCG Chrysolophus_amherstiae GTTGAGTGCTTGTACAGCATGGTGCTGGAACCTGTGCTGGATCTGGCCTA Lophophorus_lhuysii GTTGAGTGCTTGTACAGCATGGTACTGGAACCTGGACTGGATCTGACACG Meleagris_gallopavo GTTGAGTGCT----------------GGAACCTGTGCTGGATCTGGCTCG Phasianus_colchicus GTTGAGTGCTTGTACAGCATGGTGCTGGAGCCTGTGCTGGATCTGGCCTG Pucrasia_macrolopha GTTGAGTGCTTGTACAGCATGGTGCTGGAACCTGGGCTGGATCTGGCTCG Syrmaticus_reevesii GTTGAGTGCTTGTTCATGATGGTGCTGGAACCTGTGCTGGATCTGGCCTG Tetraophasis_szechenyii GTTGAGTGCTTGTACAGCATGGTGCTGGAACCTGTGCTGGATCTGGCCTA Tragopan_temminckii GTTGAGTGCTTGTACAGCATGGTGCTGGAACCTGCGCTGGATCTGGCCTG Arborophila_ardens GTTGAATGCTTGTACAGCATGGTGCTGGAACTTGTGCTGGATCTGGCCCA Arborophila_brunneopectus GTTGAGTGCTTGTACAGCATGGTGCTGGAACTTGTGCTGGATCTGGCCCG Gallus_gallus GTTAAGTGCTTTTACAGCATGGTACTGGAACCTGTGCTGGATCTGGCTCG Anas_platyrhynchos GTGTAGTGCTTCTTGGACATGGTGCTGGAGGATGAGCTGTATCTGATGCT Arborophila_rufipectus GTGCCAGGCAGCCCTCCATGCCTGATCTC-GTGCTCTTGCACCAGGACAG Chrysolophus_amherstiae GTGCCAGATAATCCTCCAAGCCTGCTCTCAGTACTCTTGCACCAGGGCAG Lophophorus_lhuysii GTGCCAGACAACCCTCTATGCTTGCTCTCAGTGCTCTTGCACCAGGGCAG Meleagris_gallopavo GTGCCAGACAACCCTCCATGCCTGCTCTCAGTGCTCTTGGACCTGGGCAG Phasianus_colchicus GGGCCAGATAACCCTCCATGCCTGCTCTCAGTACTCTTGCACCAGGGCAG Pucrasia_macrolopha GTGCCAGACAACCCTCCATGCCTGCTCTCAGTGCTCTTACACCTGAGCAG Syrmaticus_reevesii GTGCCAGGTAACCCTCCATGTCCGCTCTCAGTACTCTTGCACCAGGGCAG Tetraophasis_szechenyii GTGCCAGACAACCCTCCATGCCTGCTCTCAGTGCTCTTGCACCAGGGCAG Tragopan_temminckii GTGCCAGACAACCCTCCATGCCTGCTCTCAGTGCTCTTGCACCAGGGCAG Arborophila_ardens GTGCCAGGCAGCCCTCCATGCCTGCTCTCAGTGCTCTTGCACCAGGACAG Arborophila_brunneopectus GTGCCAGGCAGCCCTCCATGCCTGCTCTCAGTGCTCTTGCACCAGGACAG Gallus_gallus GTGCCCGACAACCCTCCATGCCTGCTGTCAGTGCTCTTGCACCAGGGCAG Anas_platyrhynchos GCGCCGGCAACACCTCCATGCCCACTCTCAGCGCTCTTGGGCCAGGGCAG Arborophila_rufipectus CCATACATCTCTGCAGGACCGGAGCATACA---GAGGGCTACAGACATGG Chrysolophus_amherstiae CCACACCTCTCTGCAAGACCAGAGCATACAAAGGAGGGCTACAAAGATGG Lophophorus_lhuysii CCATACGTCTCTGCAGGACCAGAGCATACAAAGGAGGGCTACAAAGATGG Meleagris_gallopavo CCACACATCTCTGCAGGACCAGAGCATACAAAGGAGGGCAACAAAGATGG Phasianus_colchicus CCACATGCCTCTGCAAGACCAGAGCATACAAAGGAGGGCTACAAAGATGG Pucrasia_macrolopha CCACACATTTCTGCAGGACCAGAGCATACAGAGGAGGGCTGAAAAGATGG Syrmaticus_reevesii CCACACGCCTCTGCA-----------TACAAAAAAGGGCTACAAAGATGG Tetraophasis_szechenyii CCATATGTCTCTGCAGGACCAGAGCATACAAAGGAGGGCTACAAAGATGG Tragopan_temminckii CCATACCTCTCTGCAGGACCAGAGCATACAAAGGAGGGCTACAAAGATGG Arborophila_ardens CCATACATCTCTGCAGGACTGGAGCATACA---GAGGGCTACAGACATGG Arborophila_brunneopectus CCATGCATCTCTGCAGGACTGGAGCATACA---GAGGGCTACAGACATGG Gallus_gallus CCATATGTCTCTGCAGGACCAGAGTATACAAAAGAGGGCTACAAAGATGG Anas_platyrhynchos CTGTATGTCTCTGCAGGGCCCGAGAATACAACATAGGGCACAATAAATGG Arborophila_rufipectus GGAAGGGTCTGGAGGGCAAACTGGATGAGGAGCAGCTGAAGTCCTTGCTT Chrysolophus_amherstiae GGAAGGGTCTGGAGGGCAAGATGGGTGAGGAGCAGCTGAAGTCCTTGCTT Lophophorus_lhuysii GGAAGGATCTGGAGGGCAAGATGGATGAGGAGCAGCTGAAGTCCTTGCTT Meleagris_gallopavo GGAAGGGTCTGGAGGGCAAGATGGATGAGGAGCAGCTGAAGTCCTTGCTT Phasianus_colchicus GGAAGGGTCTGGAGGGCAAGATGGGTGAGGAGCAGCTGAAGTCCTTGCTT Pucrasia_macrolopha GGAAGGGTCTGGAGGGCAAGATGGATGAGGAGCAGCTGAAGTCCTTGCTT Syrmaticus_reevesii GGAAGGGTCTGGAGGGCAAGATGGGTGAGGAGCAGCTGAAGTCCTTGCTT Tetraophasis_szechenyii GGAAGGGTCTGGAGGGCAAGATGAATGAGGAGCAGCTGAAGTCCTTGCTT Tragopan_temminckii GGAAGGGTCTGGAGGGCAAGATGGATGAGGAGCAGCTGAAGTCCTTGCTT Arborophila_ardens GGAAGGGTCTGGAGGGCAAACTGGATGAGGAGCAGCTGAAGTCCTTGCTT Arborophila_brunneopectus GGAAGGGTCTGGAGGGCAAACTGGATGAGGAGCAGCTGAAGTCCTTGCTT Gallus_gallus GGAAGGGTCTGGAGGGCAAGATGGATGAGGAGCAGCTGAAGTCCTGGCTT Anas_platyrhynchos GGAAGGGTCTGGAGGGC--------------------------------- Arborophila_rufipectus TGTTCCTCCCAGAGCAGAGGAGAGGCAGAGGGAAGGCCTAACGGCAGCCT Chrysolophus_amherstiae TGTTCCTCCCAGAGCAGAGGAG--GCAGAGGGAAGGCCTCATGGCGGCCT Lophophorus_lhuysii TGTTCCTCCCAGAGCAGAGGAG--GCAGAGGCAAGGCCTCATGGCGGCCT Meleagris_gallopavo TGTTCCTCCCAGAACAGAGGAG--ACAGAGGGAAAGCCTCATGGCGGCCT Phasianus_colchicus TGTTCTTCCTAGAGCAGAGGAG--GCAGAGGGAAGGCCTCATGGCGGTCT Pucrasia_macrolopha TGTTTCTCCCAGAGCAGAGGAG--GCAGAGGGAAGGCCTCATGGCGGCCT Syrmaticus_reevesii TGTTCTTCCCAGAGCAGAGGAG--GCAGAAGGAAGGCCTCATGGCGGTCT Tetraophasis_szechenyii TGTTCCTCCCAGAGCAGAGGAG--GCAGAGGCAAGGCCTCATGGCAGCCT Tragopan_temminckii TGTTCCTCCCAGAGCAGAGGAG--GCAGAGGGAAGGCCTCATGGCAGCCT Arborophila_ardens TGTTCCTCCCAGAGCAGAGGAGAGGCAGAGGGAAGGCCTAATGGCAGCCT Arborophila_brunneopectus TGTTCCTCCCAGAGCAGAGGAGAGGCAGAGGGAAGGCCTAATGGCAGCCT Gallus_gallus TGTTCCTCCCAGAGCAGAGGAG--GCAGAGGGAAGGCCTCGTGGCGGCCT Anas_platyrhynchos -------------------------------------------------- Arborophila_rufipectus ACAGCTTCCTCAACTCAGGAGGATTTGCTGCCCTTTCTCTGTGACA--TC Chrysolophus_amherstiae ACAACTTCCTCACCTTAGGAGGATTCACTGCCCTTTCTCTGTGGCA--TC Lophophorus_lhuysii ACAGCTTCCTCACCTCAGGATGATTCGCTGCCCATTCTCTGTGGCA--TC Meleagris_gallopavo ACAGCTTCCTCACCTCAGGAGAATTTGCTGCCCTTTCTCTATGGCA--TC Phasianus_colchicus ACAACTTCCTCACCTCAGGAGGATTCGCTGCCCTTTCTCTGTGGCA--TC Pucrasia_macrolopha ACAGCTTCCTCACCTCAGGAGGATTCGCTGCCCTTTCTCTGTGGCA--TC Syrmaticus_reevesii ACAACTTCCTCACCTCAGGAGGATTCGTTGCCCTTTCTCTGTGGCA--TC Tetraophasis_szechenyii ACAGCTTCCTCACCTCAGGATGATTCGCTGCCCATTCTCTGTGGCA--TC Tragopan_temminckii ACAGCTTCCTCACCTCAGGATGATTCGCTGCCCGTTCTCTGTGGCA--CC Arborophila_ardens ACAGCTTCCTCACCTCAGGAGGATTTGCTGCCCTTTCTCT---------- Arborophila_brunneopectus ACAGCTTCCTCACCTCAGGAGGATTTGCTGCCCTTTCTCT---------- Gallus_gallus ACAGCTTCCTCAT-----GAGGATTCGCTCCCCGTTCTCTGTGGCA--TC Anas_platyrhynchos ---------TGACCTCAGGAGGATTTGCTGCCCTTTCTCTGTGGCACATC Arborophila_rufipectus CTTGGTGTGAACCTTCTTGCACACACAATGTTACTCTTTTAAAATAATGG Chrysolophus_amherstiae CTTGATACGAACATTCTTGCACAAACTATGTTACTCTT--AAATTAATGG Lophophorus_lhuysii CTTGATATGAACATTCTTGTACACACTATGTTACTCTTTTAAAATAATGG Meleagris_gallopavo CTTGATATAAACATTCTTGCACACACACTGTTACTCTTTTAAAATAATGG Phasianus_colchicus CTTGATATGGACATTCTTGCACAAGCTATGTTACTCTT--AAAATAATGG Pucrasia_macrolopha CTTAATATGAACATTCTTGCACACACTATGTTACTCTT--AAAATAATGG Syrmaticus_reevesii CTTGATATGAACATTCTTGCACAAGCTATGTTACTCTT--AAATTAATGG Tetraophasis_szechenyii CTTGATATGAACATTCTTGCACACACTATGTTACTCTTTTAAAATAATGG Tragopan_temminckii CTTGATACGAACATTCTTGCACACACACTGTTACTCTTTTAAAATAATGG Arborophila_ardens --TGGTGTGAACCTTCTTGCACACACAATGTTACTCTTCTAAAATAATGG Arborophila_brunneopectus --TGGTGTGAACCTTCTTGCACACACAATGTTACTCTTCTAAAATAATGG Gallus_gallus CTTGGTATGAACCTTCTTGCACACACAATGTCACTCTTTTAAAATAATGG Anas_platyrhynchos CCTGGTATGAACCTTCTCACATGTAAAATGTGGCTCTTTTAAAATAA--- Arborophila_rufipectus TAACAGAACGTCTTCCTTTCT-------CCTAGAATGAAAACTTTTCCTT Chrysolophus_amherstiae TAACAGAACATCTTCCCTTTTTCTGGTTTCTAGAATGAAAGCTTTTCCTT Lophophorus_lhuysii TAACAGAACATCTTCCCTTCTTCTGGTCTCTAGAATGAAAACTTTTCCTT Meleagris_gallopavo TAACAGAACATCTTCCCTTCTTCTGGTCTCTAGAATTAAAACTTTTCTTT Phasianus_colchicus TAACAGAACATCTTCCC---TTCTGGTTTCTAGAATGAAAACTTTTCCTT Pucrasia_macrolopha TAACAGAACATCTTCCCTTCTTCTGGTCTCTAGAATGAAAACTTTTCCTT Syrmaticus_reevesii TAACAGAACATCTTCCCTTCTTCTGGTTTCTAGAATGAAAACTTTTCCTT Tetraophasis_szechenyii TAACAGAACATCTTCCCTTCTTCTGGTCTCTAGAGTGAAAACTTTTCCTT Tragopan_temminckii TAACAGAACATCTTCCCTTCTTCTGGTCTCTAGAATGAAAACTTTTCCTT Arborophila_ardens TAACAGAACGTCTTCCTTTCTTCTGGTCCCTAGAATGAAAACTTTTCCTA Arborophila_brunneopectus TAACAGAACGTCTTCCTTTCTTCTGGTCCCTAGAATGAAAACTTTTCCTA Gallus_gallus TAAC--AACGTCTTCCCTTCTTGTGGTCCCTAGAATGAAAACTTTTCCTT Anas_platyrhynchos TAACAAATCATCTTCCCTTCTTCTGGTCTCTGGAATGAAAGCTTGTCCTT Arborophila_rufipectus AAATACAGAGAAGGCCATTTCTGCAGCTGGAAAGCTGAAGCTCCCTCTGG Chrysolophus_amherstiae AAATACAGAGAAGGCCATTTTTTCAGTAGGAGAGCTGAAGCTGCCTCTGG Lophophorus_lhuysii AAATACAGAGAAGGCCATTTCTGCAGCTGGAGAGCTGAAGCTGCCTCTGG Meleagris_gallopavo AAATACAGAGAAGGCCATTTCTGCAGCTGGAGAGCTGAAGCTGCCTCTGG Phasianus_colchicus AAATACAGAGAAGGCCATTTCTGCAGCTGGAGAGCTGAAGCTGCCTCTGG Pucrasia_macrolopha AAATACAGAGAAGGCCACTTCTGCAGCTGGAGAGCTGAAGCTGCCTCTGA Syrmaticus_reevesii AAATACAGAGAAGGCCATTTCTGCAGCTGGAGAGCTGAAGCTGCCTCTGG Tetraophasis_szechenyii AAATACAGAGAAGGCCATTTCTGCAGCTGGAGAGCTGAAGCTGCCTCTGG Tragopan_temminckii AAATACAGAGAAGGCCATTTCTGCAGCTGGAGAGCTGAAGCTGCCTCCGG Arborophila_ardens AAATACAGAGAAGGCCATTTCTGCAGCTGGAAAGCTGAAGCTGCCTCTGG Arborophila_brunneopectus AAATACAGAGAAGGCCATTTCTGCAGCTGCAAAGCTGAAGCTGCCTCTGG Gallus_gallus AAATACAGAGA-----ATTTCTGCAGCTGGAGAGGTGA-GAGGCCTATGG Anas_platyrhynchos TAGCAGGGAGGAAGCAACTTTTGCAGCTGGAGAGCTGAAGCTGCCTCTGG Arborophila_rufipectus AGCAACCAGGGA--CACAGCCTTTCACTGCAGAAGCAGCTCTGGAGCTGA Chrysolophus_amherstiae AGCCAGCAAGGATACACAACCTTTCACTGCAGAAGCAGCTCCAGAACTGA Lophophorus_lhuysii AACCAGCAGGGACACACAGCCTTTCACTGCAAAAGCAGCTCCAGAGCTGA Meleagris_gallopavo AGCCGGCAGGGACACACAGCGTTTCACTGCAGAAGCAGCTCCAGAGCTGA Phasianus_colchicus AGCCAGCAGGGACACACAACCTTTCACTGCAGAAGCAGCTCCAGAGCTGA Pucrasia_macrolopha AGCCAGCAGGGA------GCCTTTCACTGCAGAAGCAGCTCCAGAGTTGA Syrmaticus_reevesii AGCCAGCAGGGACACGCAGCCTTTCGCTGCAGAAGCAGCTCCAGAGCTAA Tetraophasis_szechenyii AGCCAGCAGGGACACACAGCCTTTCACTGCAGAAGCAGCTCCAGAGCTGA Tragopan_temminckii AGCCAACAGGGATACACAGTCTTTCACTGCAGAAGCAGCTCCAGAGCTGA Arborophila_ardens AGCCACCAGGGA--CACAGCCTTTCACTGCAGAAGCAGCTCTGGAGCTGA Arborophila_brunneopectus AGCCACCAGGGA--CACAGCCTTTCACTGCAGAAGCAGCTCTGGAGCTGA Gallus_gallus AGCCAGCAGGGACACACAGCCTTTTACTGCAGAAGCAGCTCCAGAGCTGA Anas_platyrhynchos GGCCAGTGGGGACGCAGGGCCTTTCACTGCTGAAGCAGCTCCAGAGCTGA Arborophila_rufipectus AGCAATGTAACACTGGGACCCGGGCTAGCTGTGGCCTTTGGGATGCTG-- Chrysolophus_amherstiae AGCAGTATAACATTGGGACCTAAGCTAGCTGTGGCCTTTGGGATGCTGAT Lophophorus_lhuysii AGCAGTATAACATTGGGACCCAAGCTAGCT-TGGCCTTTGGGATGCTGAT Meleagris_gallopavo AGCAGTATAACATTGAGACCTGAGCTAGCTGTGGTCTTTGGGATGGTGAT Phasianus_colchicus AGCAGTATAACATTGGGACCCAAGCTAGCTGTGGCCTTTGGGATGCTGAT Pucrasia_macrolopha AGCAGTATAACACTGGGACCTGAGCTAGCTGTGGCCTTTGGGATGCTGAT Syrmaticus_reevesii AGCAGTATAACATTGAGACCCAAGCTATCTGTGGCCTTTGGGATGCTGAT Tetraophasis_szechenyii AGCAGTATAACATTGGGACCCAAGCTAGCTGTGGCCTTTGAGATGCTGAT Tragopan_temminckii AGCAGTATAACACTGGGACCCGAGCTAGCTGTGGCCTTTGGGATGCTGAT Arborophila_ardens AGCAATGTAACACTGGGACCCGGGCTAGCTGTGGCCTTTGGGATGCTG-- Arborophila_brunneopectus AGCAATGTAACACTGGGACCCGGGCTAGCTGTGGCCTTTGGGATGCTG-- Gallus_gallus AGTAATATAACATTGGGACCCAAGCTAGCTGTGGCCTTTGGGATGCTGAT Anas_platyrhynchos GGCAATGTGACATTGGGACC-AAGCTAGCTGTGGCCTTGGGGATGCTGAT Arborophila_rufipectus -GTCTGCCAGCTCACAGAGTGTCAGTGCTGGGCTGCAAAAGCAAGCATGT Chrysolophus_amherstiae TGCCTGCCAGCTCCCAGAGTGTCAGTGCTAGGCTGCAAAAGCAAGCATGT Lophophorus_lhuysii TGCCTGCCAGCTCCCAGAGTGTCAGTGCTGGGCTGCAAAAGCAAGCATGT Meleagris_gallopavo TGCCTGCCAGCTCCCAGAGTGTCAGTGCTGGGCTGCAAAAGCAAGCATGT Phasianus_colchicus TGCCTGCCAGCTCCCAGAGTGTCAGTGCTGGGCTGCAAAACCAAGCATGT Pucrasia_macrolopha TGCCTGCCAGCTCCCAGAGTGTCAGTGCTGGGCTGCAAAAGCAAGCATTT Syrmaticus_reevesii TGCCTGCCAGCTCCCAGAGTGTCAGTGCTGGGCTGCAAAAGCAAGCATGC Tetraophasis_szechenyii TGCCTGCCAGCTCCCAGAGTGTCAGTGCTGGGCTGCAAAAGCAAGCATGT Tragopan_temminckii TGCCTGCCAGCTCCCAGAGTGTCASTGCTGGACTGCAAAAGCAAGCATGT Arborophila_ardens -GTCTGCCAGCTCACAGAGTGTCAGTGCTGGGCTGCAAAAGCAAGCATGT Arborophila_brunneopectus -GTCTGCCAGCTCACAGAGTGTCAGTGCTGGGCTGCAAAAGCAAGCATGT Gallus_gallus TGCCTGCCAGCTCCCAGAGTGTCAGTGCTGGGCTGCAAAAGAAAGCATGT Anas_platyrhynchos CTTGTGCCAGCTCCTGGGGTGTCAGTGCTGGGCTGCATCAGCAGGCATGT Arborophila_rufipectus CTTGTACTTGCACCAGAGTCG--------AAGTGGGAGACTACCAGCTTG Chrysolophus_amherstiae CTTGGACTTGCACCAGGGTCG--------AAGTGGGAGACT-CCATCTTG Lophophorus_lhuysii CTTGGACTTGCACCAGGGTCG--------AAGTGGGAGATT-CCAGCTTG Meleagris_gallopavo CTTGGACTTGCACCAGGGTCG--------AAGTGGGAGACT-CCAGCTTG Phasianus_colchicus CTTGGACTTGAACCAGGGTC---------AAGTGGGAGACT-CCATCTTG Pucrasia_macrolopha CTTGGACTTGCACCAGGGTTG--------AAGTGGGAGACT-CCAGCTTG Syrmaticus_reevesii CTTGGACTTGCACCAGGGTCG--------AAGTGGGAGACT-CCATCTTG Tetraophasis_szechenyii CTTGGACTTGCACCAGGGTCG--------AAGTGGGAGACT-CCAGCTTG Tragopan_temminckii CTTGGACTTGCACCAGGGTCA--------AAGTGGGAGACT-CCAGCTTG Arborophila_ardens CTTGTACTTGCACCAGAGTTGAGTGCAAGAAGTGGGAGTCTACCAGCTTG Arborophila_brunneopectus CTTGTACTTGCACCAGAGTTGAGTGCAAGAAGTGGGAGTCTACCAGCTTG Gallus_gallus CTTGGACTTGCACCAGGGTTG--------AACTAGGAGACT-CCAGCTTG Anas_platyrhynchos CTTGGACTTTCAACAAGGTCA--------AAGGGGGAGACA-TCATCTTG Arborophila_rufipectus TCCCGTATCTGAGAGTTTGACACAATGCATGCTTCCAGGGGAACTATGA- Chrysolophus_amherstiae TCCCATATCTGAGATGTTGATGCAATGCGTGCTTCCAGGGGAACTATGAA Lophophorus_lhuysii TCCCATATCTGAGATGTTGATGCAATGCATGCTTCCAGGGGAACTATGAA Meleagris_gallopavo TCCCATATCTGAGAGTTTGATGCAATGCATGCTTCCAGGGGAACTATGAA Phasianus_colchicus TCCC-TATCAAAAATGTTGATGCAATGCGTGCTTCCAGGGGAACTATGAA Pucrasia_macrolopha TCCCATATCTGAGAGTTTGATACAATGCATGGTTCCAGGGGAACTATGAA Syrmaticus_reevesii TCCCATATCTGAGATGTTGATGCAATGCATGCTTCCAGGGGAACTATGAA Tetraophasis_szechenyii TCCCATATCTGAGATGTTGA-GCAATTCATGCTTCCAAGGGAACTATGAA Tragopan_temminckii TCCCATATCTGAGAGTTTGATGCAACGCATGCTTGCAGGGGAACTATGAA Arborophila_ardens TCCCATATCTGAGATGTTGACACAATGCATGCTTCCAGGGGAACTATGA- Arborophila_brunneopectus TCCCATATCTGAGAGTTTGGCACAATGCATGCTTCCAGGGGAACTATGA- Gallus_gallus TCCCATATCTGAGAGTTTGATGCAATGCATGCTTCCAGGGGAACTATGAA Anas_platyrhynchos TCCCCTATCGTATACTTTTACACCATACATGCTTCCAGGGGAACTATAAA Arborophila_rufipectus GTATTATGAAAAAA-GGGTTTCACTTTTTAACGTGGTTTTAAA-GAGCAG Chrysolophus_amherstiae GTATTATGAAAAAA-GGGTTTCACTTTTTAACATGGTTTTAAA-GAGCAG Lophophorus_lhuysii GTATTATGAAAAAA-GGGTTTCACTTTTTAATGTGGTTTTAAA-GAGCAA Meleagris_gallopavo ATATTATGAAAAAA-GGGTTTCACTTTTTAATGTGGTTTTAAA-GAGCAG Phasianus_colchicus GTATTATGAAAAAA-GGGTTTCACTTTTTAACATGGTTTTAAA-GAGCAG Pucrasia_macrolopha GTATTATGAAAAAA-GGGTTTTACTTTTTAACGTGGTTTTAAA-GAGCAG Syrmaticus_reevesii GTATTATGAAAAAA-GGGTTTCACTTTTTAACGTGGTTTTAAA-GAGCAG Tetraophasis_szechenyii GTATTATGAAAAAA-GGGTTTCACTTTTTAACGTGGTTTTAAA-GAGTAA Tragopan_temminckii GTATTATGAAAAAA-GGGTTTCACTTTTTAACGTGGTTTTAAA-GAGCAG Arborophila_ardens GTACTATGAAAAAA-GGGTTTCACTTTTTAACATGGTTTTAAAAGAGCAG Arborophila_brunneopectus GTATTATGAAAAAA-GGGTTTCACTTTTTAACATGGTTTTAAAAGAGCAG Gallus_gallus GTATTATGAAAAAAAGGGTTTCACTTTTTAACGTGGTTTTAAA-GAGCAA Anas_platyrhynchos GTATTAGGAAAAAAACTGTTTTACTTTTTAACATGTTTTTTAAACAGCAG Arborophila_rufipectus TGCTTCAGAACGGTGTTTTCTAATGGAGAACTCTGGAGGTACCAAC---A Chrysolophus_amherstiae TGCTTCAGAAGGACGCTTTCTAGTGGAGAACTCTGGAGGTACCAACTCTG Lophophorus_lhuysii TGCTTCAGAAGGATGTTTTCTAATGGAGAACTCTGGAGGTACCAACTCTG Meleagris_gallopavo TGCTTCAGAAGGATGTTTTCTAATGGAGAGCTCTGGAGGTACCAACTCTG Phasianus_colchicus TGCTTCAGAAGGATGCTTTCTAGTGGAGAACTCTGGAGGTACCAACTCTG Pucrasia_macrolopha TGTTTCAGAAGGATGTTTTCTAATGGAGAGCTCTGGAGGTACCAACTCTG Syrmaticus_reevesii TGCTTCAGAAGGATGTTTTCTAATGGAGAACTCTGGAGGTACCAACTCTG Tetraophasis_szechenyii TGCTTCAGAAGGATGTTTTCTAATGGAGAACTCTGGAGGTACCAACTCTG Tragopan_temminckii TGCTTCAGAAGGATGTTTTCTAATGAAGAACTCTGGAGGTACCAACTCTG Arborophila_ardens TGCTTCAGAACGGTGTTTTCTAATGGAGAACTCTGGAGGTACTAAC---A Arborophila_brunneopectus TGCTTCAGAACGGTGTTTTCTAATGGAGAACTCTGGAGGTACTAAC---A Gallus_gallus TTCTTCAGAAGGGTATTTTCTAATGGAGAACTCTGGAGGTACCGGCTCTG Anas_platyrhynchos TTTGTCAGATGGACTTTTTCTAAAGGGTAACTCTGGACGTACTGAATCTG Arborophila_rufipectus ATGTCTTTCTTTGAAACAGAATGTCACAGCCACGCTTTTTACGGTCAAAA Chrysolophus_amherstiae ATGTCTTTATTTGCAACAGAATGTCACAGCCACGCTTTCTAAGGTCAAAA Lophophorus_lhuysii ATGTCTTT----GCAACAGAATGTCACAGCCACGCTTTCTAAGGTCAAAA Meleagris_gallopavo ATGTCTTTGTTTGCAACGGAACGTCACAGCCACACTTTCTAAGTACAA-- Phasianus_colchicus ATGTCTTTATTTGCAACAGAATGTCACAGCCATGCTTTCTAAGGTCAAAA Pucrasia_macrolopha ATGTCTTTGTTTGCAACAAAATGTCACAGCCACACTTTCTAAGGTCAAAA Syrmaticus_reevesii ATGTCTTTATTTGCAACAGAATGTCACAGCCACGCTTTCTAAGGTCAAAA Tetraophasis_szechenyii ATGTCTTT----GCAACAGAATGTCACAGCCACGCTTTCTAAGGTCAAAA Tragopan_temminckii ATGTCTTT----GCAACAGAATGTCACAGCCACGCTTTCTAAGGTCAAAA Arborophila_ardens ATGTCTTTCTTTGAAACAGAATGTCACAGCCATGCTTTTTACGGTCAAAA Arborophila_brunneopectus ATGTCTTTCTTTGAAACAGAATGTCACAGCCATGCTTTTTACGGTCAAAA Gallus_gallus ATGTCTTTGTTTGCAACAGAATGTCACAACCACGCTTTCTAAGATCAAAA Anas_platyrhynchos ATGTCTTTGTTTGAATCAGAATGTCATCACCACTCTTTCTAAGGTCAAAA Arborophila_rufipectus GCATAATTCAGTGATATGTTCATTGTAATATTCATTTTGCTTTGAATTT- Chrysolophus_amherstiae GCGTAATTCAGTGATATGTTCATTGTAATACTCCTTTTGCTTTGAATTTC Lophophorus_lhuysii GCGTAATTCAGTGATATGTTCATTGTAATACTCCTTTTGCTTTGAATTTC Meleagris_gallopavo -CGTAATTCAGTGATATGTTCATTGTAATACTCCTTTTGCTTTGAATTTC Phasianus_colchicus GCGTAATTCAGTGATAYGTTCATTGTAATACTCCTTTTGCTTTGAATTTC Pucrasia_macrolopha GCGTAATTCAGTGATATGTTCATTGTAATACTCATTTTGCTTTGAATTTC Syrmaticus_reevesii GCGTAATTCTGTGATATGTTCATTGTAATACTCCTTTTGCTTTGAATTTC Tetraophasis_szechenyii GCGTAAGTCAGTGATATGTTCATTGTAATACTCCTTTTGCTTTGAATTTC Tragopan_temminckii GCGTAATTCAGTGATATGTTCATTGTAAAACTCCTTCTGCTTTGAATTTC Arborophila_ardens GCGTAATTCAGTGATATGTTCATTGTAATATTCATTTTGCTTTGAATTT- Arborophila_brunneopectus GCGTAATTCAGTGATATGTTCATTGTAATATTCATTTTGCTTTGAATTT- Gallus_gallus GCATAATTCAGTGATCTGTTCATTGTAATACTTCTTTTGCTTTGAATTTC Anas_platyrhynchos GCATAATTCAATGATATATTCGTTGTACTGTTCCTATTGTTTTGAATTTC Arborophila_rufipectus ------GAAAGGTGTTTAAATGTGAGTTGGTGTACAAAAAGGAGATGTTA Chrysolophus_amherstiae TTCTTCATCAGGTGTTTAAATATGAGTTGATGTGCAAAAAGGAGACAGTA Lophophorus_lhuysii TTCTTCACCAGGTGTTTAAATATGAATTGATGTGCAAAAAGGAGACAGTA Meleagris_gallopavo TTCTTCACCAGGTGTTTAAATATGAGTTGATGTGCAAAAAGGAGACAGTA Phasianus_colchicus TTCTTCATCAGGTGTTTAAATATGAGTTGATGTGCAAAAAGGAGACAGTA Pucrasia_macrolopha TTCTTCACAAGCTGTTTAAATATGAGTTGATG-----AAAGGAGACAGTA Syrmaticus_reevesii TTCTTCATCAGGTGTTTAAATATGAGTTGATGTGCAAAAAG-------TA Tetraophasis_szechenyii TTCTTCACCAGGTGTTTAAATATGAACTGATGTGCAAAAAGGAGACAGTA Tragopan_temminckii TTCTTCACCAGGTGTTTAAATATGAGTTGATATGAAAAAAGGAGACAGTA Arborophila_ardens ------GAAAGGTGTTTAAATGTGAGTTGGTGTACAAAAAGGAGATGTTA Arborophila_brunneopectus ------GAAAGGTGTTTAAATGTGAGTTGGTGTACAAAAAGGAGATGTTA Gallus_gallus TTCTTCACCAGGTGTTTA-------GTTGGTGTGCAAAAAGGAGACATTA Anas_platyrhynchos TTCTTCATTAGGTGTTTAAATATGAGTTGGCATGACAAAAGGAGACTTTA Arborophila_rufipectus CTACTGTAGGTAAACAGTTTAATCGTAGAATAGAA-TATCTCAAGCTGAA Chrysolophus_amherstiae CTACTGCAGGTAAACAGTTTAATCATAGAATAGAA-TATCTCAAGCCAAA Lophophorus_lhuysii CTACTGTAGGTAAAAAGTTTAATCATAGAATAGAA-TATCTCAAGCCAAA Meleagris_gallopavo CGACTGTAGGTAAACAGTTTTATCATAGAATAGAA-TATCTTAAGCCAAA Phasianus_colchicus CTACTGTAGGTAAACAGTTTAATCATAGAATAGAG-TATCTCAAGACGAA Pucrasia_macrolopha CTACTGTGGGTAAACAGTTTTATCATAGAATAGAA-TATCTTAAGCCGAA Syrmaticus_reevesii CTACTGTAGGTAAACAGTTTAATCATAGAATAGAA-TATCTCAAGCCGAA Tetraophasis_szechenyii CTACTGTAGGTAAAAAGTTTAATCATAGAATAGAA-TATCTCAAGCCGAA Tragopan_temminckii CTACTGTAGGTAAACAGTTTAATCATAGAATAGAA-TATTTCAAGCCGAA Arborophila_ardens CTACTGTAGGTAAACAGTTTAATCGTAGAATAGAA-TATCTCAAGCTGAA Arborophila_brunneopectus CTACTGTAGGTAAACAGTTTAATCGTAGAATAGAA-TATCTCAAGCTGAA Gallus_gallus CTGCTGTGGGTAAACAGTTTAATCATAGAAGAGAAATATCTCAAGCTGAA Anas_platyrhynchos CCACTGTAGGTAGACAGTTTAATCCTAGAA-------------------- Arborophila_rufipectus AGAGACCCACAAGGATCATGGAGCCCAAACTCTGACTCCACACAGCACCA Chrysolophus_amherstiae AAAGACCCACAAGGATCATGGAGCCCAAACTCTGACTCCACACAGCACCA Lophophorus_lhuysii AGAGACCCACAAGGACTGTGGAGCCCAAACTCTGACTCCACACAGCACCA Meleagris_gallopavo AGAGACCTACAAGGATCGTGGAGCCCAAACTCTGACTCCACACAGCACCA Phasianus_colchicus AAAGACCCACAAGGATCATGGAGCCCAAACTCTGACTCCACACAGCACCA Pucrasia_macrolopha AGAGACCTACAAGGATCGTGGAGCCCAAACTCTGACTCCACACAGCACCA Syrmaticus_reevesii AAAGACCCACA-GGATCATGGAGCCCAAACTCTGACTCCACAAAGCACCA Tetraophasis_szechenyii AGAGACCCACAAGGATCATGGGGCCCAAACTCTGACTCCACACAGCACCA Tragopan_temminckii AGAGACCCACAGAGATCATGGAGCCCAAACTCTGACTCCACACAGCACCA Arborophila_ardens AGAGACCCACAAGGATCATGGAGCCCGAACTCTGACTCCACACAGCGCCA Arborophila_brunneopectus AGAGACTCACAAGGATCATGGAGCCCGAACTCTGACTCCACACAGCGCCA Gallus_gallus AGAGGCCCACAAGGATCATGGAGCCCAAACTCTGAATCCACACAGCACCA Anas_platyrhynchos -------------------------------------------------- Arborophila_rufipectus CTCGAAGTCCAAACCCTTTGTCTGAGAATGTTGTCCAAATGCTGTTTGAA Chrysolophus_amherstiae CTCAAAATCCAAACCCTATATCTGAGAATGTTGTCCAAATGCTCTTTGAA Lophophorus_lhuysii CTCAAAATCCAAACCCTATGTCTGAGAGTGTTATCCAAATGCTCTTTGAA Meleagris_gallopavo CTCAAAATCCAAACCTTATGTCTGAGAGTGTTGTCCAAACGCTCTTTGAA Phasianus_colchicus CTCAAAATCCAAACCCAAAA--GAGCATTGTTGTCCAACTGCTCTTTGAA Pucrasia_macrolopha CTCAAAATCCAGACCCTATGTCTGAGAGTGTTGTCCAAATGCTCTTTGAA Syrmaticus_reevesii CTCAAAATCCAAACCCAAAA--GAGCATTGTTGTCCAAATGCTCTTTGAA Tetraophasis_szechenyii CTCAAAATCCAAATCCTATGTCTGAGAGTGTTGTCCAAATGCTCTTTGAA Tragopan_temminckii TTCAAAATCCAAACCCTATGTCTGAGAGTGTTGTCCAAATGCTCTTTGAA Arborophila_ardens CTCGAAGTCCAAACCCTTTGTCTGAGAGTGTTGTCCAAATGCTGTTTGAA Arborophila_brunneopectus CTCGAAGTCCAAACCCTTTGTCTGAGAGTGTTGTCCAAATGCTGTTTGAA Gallus_gallus CTCAGAATCTAAACCCTACGTCTGAGAGTGTTGTCCAAATGCTCTTTGAA Anas_platyrhynchos -------------------ATTTGGTAATCTTTTTCA------------- Arborophila_rufipectus TTCCACCAGCCTGGGGCAGTGACCACTGTGGGCAGCCTATTCCAGGGCTT Chrysolophus_amherstiae TTCTACCAGCTTG--------ATCACTGCGGGCAGCCTATTCCAGGACTT Lophophorus_lhuysii CTGGGAGCAACTGGGGCAATGATCACTGCGGGCAGCCTATTCCAGGGCTT Meleagris_gallopavo TTCCACCAGCTTG--------ATCATTGTGGGCAGCCTATTCCAGGGCTT Phasianus_colchicus TTCCACCAGCTCG--------ATCACTGCAGGCAGCCTATTCCAGGGCTT Pucrasia_macrolopha TTCCACCATCTTG--------ATCACTGCGGGCAGCCTATTCCAGGGCTT Syrmaticus_reevesii TTCCACCAGTTTG--------ATTACTGCAGGCAGCCTATTCCAGGGCTT Tetraophasis_szechenyii TTCCACCAGCTTGGGGCAATGATCACTGCGGGCAGCCTATTCCAGGGCTT Tragopan_temminckii TTCCACCAGCAATG-------ATCACTGCAGGCAGCCTATTCCAGGGCTT Arborophila_ardens TTCCACCAGCCTGGGGCAGTGACCACTGTGGGCAGCCTATTCCAGGGCTT Arborophila_brunneopectus TTCCACCAGCCTGGGGCAGTGACCACTGTGGGCAGCCTATTCCAGGGCTT Gallus_gallus TTCTACCAGCTTAGGGCAATGATCATGGTGGGCAGCCTATTCCAGGGCTT Anas_platyrhynchos ----------------------------CAAACAGCCTTTTT-------- Arborophila_rufipectus TTGGACACCAGGGCAGATGTCTGAACTCGGGTTTCCTTGGTTATTCTTTC Chrysolophus_amherstiae TTGGATGCTAGGGCAGATTTCTGATCTCAGATTTCCTTGGTTATCTTTTC Lophophorus_lhuysii TTGGACACCAGGGCAGATTTCTGATCTCAGGTTTCCTTGGTTATCTTTTC Meleagris_gallopavo TTGGACACCAGGGCAGATTTCTGATCTCAGGTTTCCTTGGTTATCTTTTC Phasianus_colchicus TTGAACGCTAGGGCAGATTTCTGATCTCAGATTTCCTTGGTTATCTTTTC Pucrasia_macrolopha TTGGATGCCAGGGCAGATTTCTGATCTCAGGTTTCCTTGGTTATCTTTTC Syrmaticus_reevesii TTGAATGCTAGGGCAGATT-CTGATCTCAGATTTCTTTGGTTATCTTTTC Tetraophasis_szechenyii TTGGATGCCAGGGCAGATTTCTGATCTCAGGTTTCCTTGGTTATCTTTTC Tragopan_temminckii TTGGACGCCAGGGCAGATTTCTGATCTCAGGTTTTCTTGGTTATCTTTTC Arborophila_ardens TTGGACACCACGGCAGATGTCTGAACTCAGGTTTCCTTGGTTATTCTTTC Arborophila_brunneopectus TTGGACACCACGGCAGATGTCTGAACTCAGGTTTCCTTGGTTATTCTTTC Gallus_gallus TTGGACACCAGGGCAGATTTCTGATCTCAGGTTTCCTCGGTTATCTTTTC Anas_platyrhynchos -------------------------------------------TTTTTTT Arborophila_rufipectus TGCAAAAA-GCCATTTTTTCTTAGCAGAAATACTATTCCTCTGTTTCTGA Chrysolophus_amherstiae TGCAAACA-GCCATTTTTTCTTACCAGAAATACTATTCCCCTGTTTCTGA Lophophorus_lhuysii TGCAAACA-GCCATTTTTTCTTACCAGAAATACTATTCCTCTGTTTCTGA Meleagris_gallopavo TGCAAACAAGCCATTTTTTCTTACCAGAAATACTATTCCCCTGTTTCTGA Phasianus_colchicus TGCAAACA-GCCATTTTTTCTTACCAGAAATACTATTCCCCTGTTTCTGA Pucrasia_macrolopha TGCAAGCA-GCCATTTTTTCTTACCAGAAATACTATTCCCCTGTTTCTGA Syrmaticus_reevesii TGCAAACA-GCCATTTTTTCTTACCAGAAATACTATTCCCCTGTTTCTGA Tetraophasis_szechenyii TGCAAACA-GCCATTTTTTCTTACCAGAAATACTATTCCCCTGTTTCTGA Tragopan_temminckii TGCAAACA-GCCATTTTTTCTTACCAGAAATACTATTCCCCTGTTTCTGA Arborophila_ardens TGCAAACA-GCCATTTTTTCTTAGCAGAAATACTATTCCTCTGTTTCTGA Arborophila_brunneopectus TGCAAACA-GCCATTTTTTCTTAGCAGAAATACTATTCCTCTGTTTCTGA Gallus_gallus TGCAAACA-GCCATTTTTTCTTACCAGAAATACTATTCCCCCGTTTCTGA Anas_platyrhynchos T------------TTTTTTTTTTCTAGAAATACTATTTTCCTGTTTCAGA Arborophila_rufipectus TCATTCTTTTGTTGCTGAGCCAACTCAGAAGCTTAAGATCATCATATTTG Chrysolophus_amherstiae TCATTCTTTTGTCGCTGAGCCAATTCAGAAGCTTAAGATCATCATATTTG Lophophorus_lhuysii TCATTCTTTTGTCGCTGAGCCAACTCAGAAGCTTAAGATCATCATATTTG Meleagris_gallopavo TCATTCTTTTGTCACTGAGCCAACTCACAAGCTTAAGATCATCATATTTG Phasianus_colchicus TCATTCTTTTGTCGCTGAGCCAATTCGGAAACTTAAGATCATCATATTTG Pucrasia_macrolopha TCATTCTTTTGTCGCTGAGCCAACTCAGAAGCTTAAGATCATCATATTTG Syrmaticus_reevesii TCATTCTTTTGTCGCTGAGCCAATTCAGAAGCTTAAGATCAGCATATTTG Tetraophasis_szechenyii TCATTCTTTTGTCGCTGAGCCAACTCAGAAGCTTAAGATCATCATATTTG Tragopan_temminckii TCATTCTTTTGTCGCTGAGCCAACTCAGAAGCTTAAGATCATCATATTTG Arborophila_ardens TCATTCTTTTGTCGCTGAGCCAACTCAGAAGCTTAAGATCATCATATTTG Arborophila_brunneopectus TCATTCTTTTGTCGCTGAGCCAACTCAGAAGCTTAAGATCATCATATTTG Gallus_gallus TCATTCTTTTGTCACTGAGCCAACTCAGAAGCTTAAGATCATCGTATTTG Anas_platyrhynchos TTGCTCTTGTGCTTCTGAGCCAGCTCAGAAGCTTAAGATCATCTTATTTG Arborophila_rufipectus TCATGGTAGCAGAAATCATTTAAATTTGA-TTTTATATCCTTTCACTTCT Chrysolophus_amherstiae TCACGGTAACAGAAATCATTTAAATTTGACTTTTATATCCTTTTGCTTCT Lophophorus_lhuysii TCACGGTAGCAGAAATCATTTAAATTTGACTTTTATATCCTTTTGCTTCT Meleagris_gallopavo TCATGGTAACAGAAATCATTTAAATTTGACTTTTATATCCTTTTGCTTCT Phasianus_colchicus TCACGGTAACAGAAATCATTTAAATTTGACTTTTATATCCTTTTGCTTCT Pucrasia_macrolopha TCACGGTAACAGAAATCATCTAAATTTGACTTTCATATCCTTTTGCTTTT Syrmaticus_reevesii TCACGGTAACAGAAATCATTTAAATTTGACTTTTATATCCTTTTGCTTCT Tetraophasis_szechenyii TCACAGTAGCAGAAATCATTTAAATTTGACTTTTATATCCTTTTGCTTCT Tragopan_temminckii TCATGGTAGCAAAAATCATTTAAATTTGACTTTTATATCCTTTTGCTTCT Arborophila_ardens TCATGGTAGCAGAAATCATTTAAATTTGA-TTTTATATCCTTTCACTTCT Arborophila_brunneopectus TCATGGTAGCAGGAATCATTTAAATTTGA-TTTTATATCCTTTCACTTCT Gallus_gallus TCACGGTAGCAGAAATCATTTAAATTTGACTTTCATACCCTTTTGCTTCT Anas_platyrhynchos TCACTGTAACATAAATCGTGT-----TGATTTTGATCTCAGTTTTTCTCT Arborophila_rufipectus AAACTGTCATCTCTAGCAAAATGTGTCTGCACTTTCATGGAGAACTAGCA Chrysolophus_amherstiae AAACTGTCATCTCTAGCAAAATGTGTCTGCACTTTCATGGAGAACTAGCA Lophophorus_lhuysii AAACTGTCATCTCTAGCAAAATG-GTC-GCGCTTTCATGGAGAACTAGCA Meleagris_gallopavo AAACTGTCATCTCTAGCAAAATGTGTCTGCACTTTCATGGAGAACTAGCA Phasianus_colchicus AAACTGTCATCTCTAGCGAAATGCGTCTGCACTTTCATGGAGAACTAGCA Pucrasia_macrolopha AAACTGTCATCTCTAGCAAAATG-GTC-GCACTTTCATGGAGAACTAGCA Syrmaticus_reevesii AAACTGTCATCTCTAGCAAAATGTGTCTGCACTTTCATGGAGAACTAGCA Tetraophasis_szechenyii AAACTGTCGTCTCTAGCAAAAAG--------CTTTCATGGAGAACTAGCA Tragopan_temminckii AAACTGTCATCTCTAGCAAAATGTGCCTGCGCTTTCATGGAGAACTAGCA Arborophila_ardens AAACTGTCATCTCTAGCAAAATGTGTCTGCACTTTCATGGAGAACTAGCA Arborophila_brunneopectus AAACTGTCATCTCTAGCAAAATGTCTCTGCACTTTCATGGAGAACTAGCA Gallus_gallus AAACTGTCATCTCTAGCAAAATAAGTCTGCACTTTCATGGACAACTAGCA Anas_platyrhynchos AAACTGTGATTTCTATCGAAGTGTTCCCATATTTTCATGGGGAACTAGTA Arborophila_rufipectus GTGGCTCCAAGTGT-GGCACAGTGGGATTCAGCTTGGGTTTGGTGATTCC Chrysolophus_amherstiae GAACCCCCCAGG---GGCACAGTGGGATTCAGCCTGGGTTTGCTGATTCC Lophophorus_lhuysii TAACCCCCCAGG---GGCACAGTGGGATTCAGCTTGGGTTTGGTGATTCC Meleagris_gallopavo GATGGCTCCAAGTGTGGCACAGTGGGATTGAG-TTAGGTTTGGTGATTCC Phasianus_colchicus GAACCCCCCAGG---GGCACAGTGGGATTCAGCTTGGGTT-GCTGATTCC Pucrasia_macrolopha GAACCCCCCAGG---GGCACAGTGGGATTCAGCTTGGGTTTGGTGATTCC Syrmaticus_reevesii GAACCCCCCAGG---TGCACAGTGGGATTCAGCTTGGGTTTGCTGATTCC Tetraophasis_szechenyii GAACCCCCCAAGTGTGGCACAGTGGGATTCAGCTTGGGTTTGGTGATTCC Tragopan_temminckii TAATCCCCCAGG---GGCACAGTGGGATTCAG-TTGGGTTTGGTGATTCC Arborophila_ardens GAACCCCCCAGTG--GGCACAGTGGGATTCAGCTTGGGTTTGGTGATTCC Arborophila_brunneopectus GAAACCCCCAAGG--GGCACAGTGGGATTCAGCTTGGGTTTGGTGATTCC Gallus_gallus GATGCCTCCAAGTGTGGCACAGTGGGATTCAGCTTGGGTTTGGTGATTCT Anas_platyrhynchos CATGGCTCAAAGCGTGGCCTGCTAGGATTTTACTGTTGTTTTTTTATTCC Arborophila_rufipectus TGCTGGGTTTC-GCTGTATTTAGTGAAGGTGCAGAACGATTCTGTCAGCC Chrysolophus_amherstiae TGCTGGTTTTT-GCTGTATTTAGTGAAGGTGCAGAACAATTCTGTCGGCC Lophophorus_lhuysii TGCTGGTTTTT-GCTGTATTTAGTGAAGGTGCAGAACAATTCTGTCAGCC Meleagris_gallopavo TACTGGTTTTT-GCTGTATTTAGTGAAGGTACAGAACAATTCTGTCAGCC Phasianus_colchicus TGCTGGTTTGT-GCTGTATTTAGTGAAGGTGCAGAACAATTCTGTCAGCC Pucrasia_macrolopha TGCTGGTTTTTTGCTGTATTTAGTGAAGGTGCAGAACAATTCTGTCAGCC Syrmaticus_reevesii TGCTGGTTTGT-GCTGTATTTAGTGAAGGTGCAGAACAATTCTATCGGCC Tetraophasis_szechenyii TGCTGGTTTTT-GCTGTACTTAGTGAAGGTGCAGAACAATTCTGTCAGCC Tragopan_temminckii TGCTGGCTTTT-GTTGTATTTAGTGAAGGCACAGAACAATTCTGTCAGCC Arborophila_ardens TGCTGGGTTTT-GCTGTATTTAGTGAAGGTGCAGAACGATTCTGTCAGCC Arborophila_brunneopectus TGCTGGGTTTT-GCTGTATTTAGTGAAGGTGCAGAACGATTCTGTCAGCC Gallus_gallus TTCTGGTTTTT-GCTGTATTTAGTGGAGATGCAGAACAATTCTGTCAGCC Anas_platyrhynchos TGATGATTTTT-GCTGTGTTCATTGAAG-CGCAGGACTATTCTGTCAGTC Arborophila_rufipectus CTACAGGAATAGAGATTATATCTGTAATTCATCTGCACACGAAGCCAGTC Chrysolophus_amherstiae CTACAGGAATAGGGATTATATCTGTAATTCATCTGCACACGAAGCCAGTC Lophophorus_lhuysii CTACAGCAATAGGGATTATATCCGTAATTCATCTGCACACGAAGCCAGTC Meleagris_gallopavo CTACAGGAATAGGGATTATATCTGTAATTCATCTGCATACGAAGCCAGTC Phasianus_colchicus TTACAGCAATAGGGATTATATCTGTAATTCATCTGCACACGAAGCCAGTC Pucrasia_macrolopha CTACAGGAATAGGGATTATATCTGTAATTCATCTGCACACGAAGCCAGTC Syrmaticus_reevesii CTACAGGAATAGGGATTATATCTGTAATTCAGCTGCACACGAAGCCAGTC Tetraophasis_szechenyii CTACAGGAATAGGGATTATATCTGTAATTCATCTGCACACGAAGCCAGTC Tragopan_temminckii CTACAGGAATAGGGATTATATCTGTAATTCACCTGCACACAAAGCCAGTC Arborophila_ardens CTACAGGAATAGAGATTATACCTGTAATTCATCTGCACACAGAGCCAGTC Arborophila_brunneopectus CTACAGGAATAGAGATTATATCTGTAATTCATCTGCACACAGAGCCAGTC Gallus_gallus CTACAAGAATAGGGATTATATCTGTAATTCATCTGTGCACGAAGCCAGTC Anas_platyrhynchos CTACTGGAATAGAGATTGTATCTGTAACTTGTCAGCACATGAACTCAGTT Arborophila_rufipectus TTGGAAATAACTCCCTGATGCTGTCCATTTGTTGAGGGAAAAGTAAAAGG Chrysolophus_amherstiae TTAAAAATAACTCCGTGATGCTGTCCATCTGTTGAGGGAAAAGTAAAAGG Lophophorus_lhuysii TTAAAAATAACTCCCTGATGCTGTCCATCTGTTGAGGGAAAAGTAAAAGG Meleagris_gallopavo TTAAAAATAACTCCGTGATGCTGTCCATCTCTTGAGGGAAAAGTAAAAGG Phasianus_colchicus TTAAAAATAACTCTGTGATGCTGTCCATCTGTTGAGGGAAAAGTAAAAGG Pucrasia_macrolopha TTAAAAATAACTCCCTGATGCTGTCCATCTGTTGAGGGAAAAGTAAAAGG Syrmaticus_reevesii TTAAAAATAACTCTCTGATGCTGTCCATCTGTTGAGGGAAAAGTAAAAGG Tetraophasis_szechenyii TTAAAAATAACTCCCTGATGCTGTCCATCTGTTGAGAGAAAAGTAAAAGG Tragopan_temminckii TTAAAAATAACTCCCTGATGCTGTCCATCTGTTGAGGGAAAAGTAAAAGG Arborophila_ardens TTGGAAATAACTCCCTGATGCTGT--------TGAGGGAAAAGTAAAAGG Arborophila_brunneopectus TTGGAAATAACTCCCTGATGCTGT--------TGAGGGAAAAGTAAAAGG Gallus_gallus TTGAAAATAACTCCCTGATGCTGTCCATCTGTTGAGGGAAAAGTAAAAGG Anas_platyrhynchos TTGAAAATAACTCTGT----TTCTCCATCTGTTGAGGGAAAAGTGCAAGG Arborophila_rufipectus CCAAGATGCAAGGCTGGGACTCAGCTGCCCAAATGTCACTCTAGATGCTC Chrysolophus_amherstiae CCAAGATGCAAGGCAGGGACTCAGCTGCACAAATGTCACTGTAGATGCTC Lophophorus_lhuysii CCAAGATGCAAGGCTGGGACTCAGCTGCACAAATGTCACTCTGGATGCTC Meleagris_gallopavo CCAAGATGCAAAGCAGGGACTCAGCTGCGCAAATGTCACTGTGGATGCTC Phasianus_colchicus CCAAGAGGCAAGGCAGGGACTCAGCTGCACAAATGTCACTGTAGATGCTC Pucrasia_macrolopha CCAAGATGCAAGGCAGGGACTCAGCTGCACAAATGTCACTGTAGATGCTC Syrmaticus_reevesii CCAAGATGCAAGGCAGGGACTCAGCTGCACAAATGTCACTGTAGATGCTC Tetraophasis_szechenyii CCAAGATGCAAGGCTGGGACTCAGCTGCACAAATGTCACTCTAGATGCTC Tragopan_temminckii CCAAGAGACAAGGCTGGGACTCAGCTGCACAAATGTCACTGTAGATGCTC Arborophila_ardens CCAAGATGTAAGGCTGGGACTCAGCTGCACAAATGTCACTCTAGATGCTC Arborophila_brunneopectus CCAAGATGCCAGGCTGGGACTCAGCTGCACAAATGTCACTCTAGATGCTC Gallus_gallus CCAAGATGCAAGGCTGGGACTCAGCTGCACAAATGTCACTCTAGATGCTC Anas_platyrhynchos CCAAGATGCAAGGCTGGGACTCAGCTGCACAAACGTTGTTCTAGATGCTC Arborophila_rufipectus CTTCAGTTGCCACTTCAGATCAGTGCTTCTGCAGCTCTCTTCCACTCCCT Chrysolophus_amherstiae CTCCAGTTCCCACTTCAGATC--------TGCAGCTCTGTTCCACTCTCT Lophophorus_lhuysii CTCCAGTTGCCACTTCAGATCAGTGCTTCTGCAGCTCTGTTCCACTCCCT Meleagris_gallopavo CTCCAGTTGCCACTTCTGATCAGTGCTTCTGCAGCTCTGTTCCACTCTCT Phasianus_colchicus CTCCAGTTCCCACTTCAGATC--------TGCAGCTCTGTTCCACTCTCT Pucrasia_macrolopha CTCCAGTTGCCACTTCTGATCAGTGCTTCTGCAGCTCTGTTCCACTCTCT Syrmaticus_reevesii CTCCAGTTCCCACTTCAGATC--------TGCAGCTCTGTTCCACTCTCT Tetraophasis_szechenyii CTCCAGCTGCCACTTCAGATCAGTGCTTCTGCAGCTCTGTTCCACTCCCT Tragopan_temminckii CTCCAGTTGCCACTTCAGATCAGTGCTTCTGCAGCTCTGTTCCGCTCCCT Arborophila_ardens CTTCAGTTGCCACTTCACATCAGTGCTTCTGCAGCTCTCTTCCACTCCCT Arborophila_brunneopectus CTTCAGTTGCCACTTCAGATCAGTGCTTCTGCAGCTCTCTTCCACTCCCT Gallus_gallus CTCCAGTTGCCACTTTAGATCAGTGCTTCTGCAGCTCTGTTCCACTCCCT Anas_platyrhynchos CTCCAGTTGCCACTTCAGGTCAGTGCTCCTGCAGCTCCATGCCATCCCCT Arborophila_rufipectus CAGCCCTGTCGTTGTCCCCAGAAGGCAGAGCTCAGTGCAGCCCCTCTGCT Chrysolophus_amherstiae CAGCCCTGTCCTTGTCCCCAGAGGGCAGAGTTCAGTGCAGCCCCTCTGCT Lophophorus_lhuysii CAGCCTTGTCGTTGTCCCCAGAGGGCAGAGTTCAGTGCAGCCCCTCTGCT Meleagris_gallopavo CAGCCCTGTCGTTGTCCCCAGAGGGCAGAGTTCAGTGCAGCCCCTCTGCT Phasianus_colchicus CAGCCCTGTCCTTGTCCCCAGAGGGCAGAGTTCAGTGCAGCCCCTCTGCT Pucrasia_macrolopha CAGCCCTGTCGTTGTCCCCAGAGGGCAGAGTTCAGTGCAGCCCCTCTGCT Syrmaticus_reevesii CAGCCCTGTCCTTGTCCCCAGAGGGCAGAGTTCAGTGCAGCCCCTCTGCT Tetraophasis_szechenyii CAGCCCTGTCGTTGTCCCCAGAGGGCAGAGTTCAGTGCAGCCCCTCTGCT Tragopan_temminckii CAGCC--GTCGTTGTCCCCA-AGGGCAGAGTTCAGTGCAGCCCCTCTGCT Arborophila_ardens CAGCCCTGTCGTTGTCCCCAGAGGGCAGAGCTCAGTGCAGCCCCTCTGCT Arborophila_brunneopectus CAGCCATGTCGTTGTCCCCAGAGGGCAGAGCTCAGTGCAGCCCCTCTGCT Gallus_gallus CAGCCCTGTCATTGTCCCCACAGGGCAGAGTTCAGTGCAGCCCCTCAGCT Anas_platyrhynchos TGGTCCTGTCGCT------------------------------------- Arborophila_rufipectus CCCAGTGAGGAGCTGTACGCCACCACGAGGCATCCCCTCACCCTGCTCTG Chrysolophus_amherstiae CCCTGTGAGGAGCTGTATGCCACTACAAGGCCTCCCCTCAGC-TGCTCTG Lophophorus_lhuysii CCCTGTGAGGAGCTGTATGCCACCACGAGGCCTCCCCTCAGCCTGCTCTG Meleagris_gallopavo CCCTGTGAGGAGCTGTATGCCACCACGAGGCTTCCCCTCAGCCTGCTCTG Phasianus_colchicus CCCTGTGAGGAGCTGTATGCCACTACAAGGC---CCCTCAGCTGGCTCTG Pucrasia_macrolopha CCCTGTGAGGAGCTGTATGCCACCACAAGGCCTCCCCTCAGCTTGCTCTG Syrmaticus_reevesii CCCTGTGAGGAGCTGTATGCCACTACAAGGCCTCCCCTCAGCCTGCTCTG Tetraophasis_szechenyii CCCTGTGAGGAGCTGTATGCCACCACCAGGCCTCCCCTCAGCCTGCTCTG Tragopan_temminckii CCCTGTGAGGAGCTGCAATCCACCACGAGGCCTCCCCTCAGCCTGCTCTG Arborophila_ardens CCCATTGAGGAGCTGTATGCCACCACGAGGCATCCCCTCACCCTGCTCTG Arborophila_brunneopectus CCCAGTGAGGAGCTGTACGCCACCACGAGGCATCCCCTCACCCTGCTCTG Gallus_gallus CCCTGTGAGGAGCTGTATGCCACCACGAGGCCTCCCCTCAGCCTGCTCTG Anas_platyrhynchos -------------------------------------------------- Arborophila_rufipectus CTTGGGGCTGATCAGACCCAGGCACCCCAGCTGCTCCTCACATGGCTTGC Chrysolophus_amherstiae CTCAGGGCTGACCAGACCCAGAGACCCCAGCTGTTCCTCACACGGCTTGC Lophophorus_lhuysii CTCAGGGCTGACCAGACCCAGGGACCCCAGCTGCTCCTCACATGGCTTGC Meleagris_gallopavo CTCAGGGCTGACCAGACCCAGGGACCCCAGCTGCTCCTCACATGGCTTGC Phasianus_colchicus CTCAGGACTGACAAGACCCAGAGACCCCAGATGTTCCTCATACGGCTTGC Pucrasia_macrolopha CTCAGGGCTGACCAGACCCAGGGACCCCAGCTGCTCCTCACATGGCTTGC Syrmaticus_reevesii CTCAGGACTGACAAGACCCAGAGACCCCAGCTGTTCCTCACACGGCTTGC Tetraophasis_szechenyii CTCAGGGCTGACCAGACCCAGAGACCCCAGCTGCTCCTCACATGGCTTGC Tragopan_temminckii CTCAGGGCTGACCAGACCCAGGAACCCCAGCTGCTCCTCACATGGCTTGG Arborophila_ardens CTTGGGGCTGATCAGACCCAGGCACCCCAGCTACTCCTCACATGGCTTGC Arborophila_brunneopectus CTTGGGGCAGATCAGACCCAGGCACCCCAGCTGCTCCTCACATGGCTTGC Gallus_gallus CTCAGGGCTGACCAGACCCAAGGAGCCCAGCTGCTCCTCACAGGTCTTGC Anas_platyrhynchos ----------------------------AG-------------------- Arborophila_rufipectus CCTCCAGACCCTTTCCATCTCTCTTGCCCCATGTTGCTCTGCGTAGCTCT Chrysolophus_amherstiae CCTCCAGACCTTTTCCATCTCTCTTGCCCCTTGTTGCCCTGCATAGCTCT Lophophorus_lhuysii CCTCCAGACCCTTTCCATCTCTCTTTCCCCTTGTTGTCCTGCGTAGCTCT Meleagris_gallopavo CCTCCAGACCTTTTCCATCTCTCTTGCCCCTTGTTGCCCTGCACAGCTCT Phasianus_colchicus CCTGCAGACCTTTTCCATCTCTCTTGCCCCTTATTGCCCTGCATAGTTCT Pucrasia_macrolopha CCTCCAGACCTTTTCCATCTCTCTTGCCCCTCGTTGCCCTGCATAGCTCT Syrmaticus_reevesii CCTCCAGACCTTTTCCATCTCTCTTGCCCTTGGTTGCCCTGCATAGCTCT Tetraophasis_szechenyii CCTCCAGACCCTTTCCATCTCTCTTGCCCCTTGCTGTCCTGCGTAGCTCT Tragopan_temminckii CCTCCAGACCCTTCCCATCTCTCTTGCCCCTTGTTGCCCTGCACAGCTCT Arborophila_ardens CCTCCAGACCCTTTCCATCTCTCTTGCCCCATGTTGCTCTGCGTAGCTCT Arborophila_brunneopectus CCTCCAGACCCTTTCCATCTCTCTTGCCCCATGTTGCTCTGCGTAGCTCT Gallus_gallus CCTCCAGACCCTTTCCATCCCCCTTGCCCCTTGTTGCTGTGTATAGCTCT Anas_platyrhynchos -------ACCCTTCCCATCTTCAATGCTCTTTGTTGCCCCCTGTAGCTCT Arborophila_rufipectus TTTTCAAGTCCTGTGCTACATCAGTTGGCCTGTTCTAGAATGGGAAGCAA Chrysolophus_amherstiae TTTCCAAGTCCTGTGCTACATCAGTTGGCCTGTTATAGAATGGGAAGCGA Lophophorus_lhuysii TTCCCAAGTCCTGTGCTACATCAGTTGGCCTATTCTAGAATGGGAAGAGA Meleagris_gallopavo TTTCCAAG-CTTGTGCTACATCAGTTGGCCTATTCTAGAATGGGAAGTGA Phasianus_colchicus TTTCCAAGTCCTGTGCTACATCAGTTGGCCTGTTCTAGAACGGGAAGCGA Pucrasia_macrolopha TTTCCAAGTCCTGTGCTACATCAGTTGGCCTATTCTAGAATGGGAAGCGA Syrmaticus_reevesii TTTCCAAGTCCTGTGCTACATCAGTTGGCCTGTTCTAGAACGGGAAGCGA Tetraophasis_szechenyii TTTCCAAGTCCTGTGCTACATCAGTTGGCCTATTCTAGAATGGGAAGCGA Tragopan_temminckii TTTCCAAGTCCTGTGCTACATCAGTTGGTCTATTCTAGAACGGGAAGCGA Arborophila_ardens TTTTCAAGTCCTGCGCTACATCAGTTGGCCTGTTCTAGAATGGGAAGCAA Arborophila_brunneopectus TTTTCAAGTCCTGCACTACATCAGTTGGCCTGTTCTAGAATGGGAAGCAA Gallus_gallus TTTACAAGTCCTGTGCTTCACTGGTTGCCCTGTTCTAGAATGGGAAGTGA Anas_platyrhynchos TTTGCGAGTCCTGTGCTACAACCACTGCCCTGGTCTGGATTTTTAAGCAC Arborophila_rufipectus TGAAAGTTCAGTTTTCAGGCCTTCAAGTTCACTTTCTAGCCCTGCAACAA Chrysolophus_amherstiae TAAAAGTTCAATTTTCAAGCCTTCAAGTTCACTTTCTAGCTCTGAAACAA Lophophorus_lhuysii TGAAAGTTCAATTTTCAGGCCTTCAAGTTCACTTTCTAGCTCTGCAACAA Meleagris_gallopavo TGAAAGTT-AATTTTCAGGCCTTCAAGTTCACTTTCTAGCTCCGAAAC-- Phasianus_colchicus TAAAAGTTCAATTTTCAGGCCTTCAAGTTCACTTTCTT-----------A Pucrasia_macrolopha TGAAAGCTCAGTTTTCAGGCCTTCAAGTTCACTTTCTAGCTCTGAAACAA Syrmaticus_reevesii TAAAAGTTCAATTTTCAGGCCTTCGAGTTCACTTTCTAGCTCTGAAACAA Tetraophasis_szechenyii TGAAAGTTCAATTTTCAGGCCTTCAAGTTCACTTTCTAGCTCT------A Tragopan_temminckii TAAAAGCTCAATTTTCAGGCCTTC-AGTTCACTTTCTAGCTCTGCAACAA Arborophila_ardens TGAAAGTTCAGTTTTCAGGCCTTCAAGTTCACTTTCTAGCTGTGCAACAA Arborophila_brunneopectus TGAAAGTTCAGTTTTCAGGCCTTCAAGTTCACTTTCTAGCTCTGCAACAA Gallus_gallus TAGAAGCTCAATTTTCAGGCCTTCACATTCATTTTCTAGCTCTGCAACAA Anas_platyrhynchos TTGAAGTTCAATTTCCAGGCCTTCAAGTTCAGTTTCTGGCTCTGCAACAA Arborophila_rufipectus GTTAATCTGAGACTTTTTTTAACCAAAG-TCGTGATTCCTCTTCAAGAGA Chrysolophus_amherstiae GTTAATCTGAGAC-TTTTTAAAGCAAAG-TC--AATTCCTCTTCAAGAGA Lophophorus_lhuysii GTTAATCTGAGAC-TTCTTTAAGCAAAG-TCTCAATTCCTCTTCAAGAGA Meleagris_gallopavo --------------TTCTTTAAGCAAAG-TCTCAATTCCTGTTCAAGAGA Phasianus_colchicus GTTAATCTGAGAC-TTTTTAAAGCAAAG-TC--AAT-CCTCTTCAAGAGA Pucrasia_macrolopha GTTAATTTGAGAC-TTTTTAAAGCAAAG-TCTAAATTCCTCTTCGAGAGA Syrmaticus_reevesii GTTAATCTGAGAC-TTTTTAAAGCAAAG-TC--AATTCCTCTTCAAGAGA Tetraophasis_szechenyii GTTAATCTGAGAC-TTCTTTAAGCAAAG-TCTCAATTCCTCTTCAAGAGA Tragopan_temminckii GTTAATCTGAGAC-TTCTTTAAGCAAAG-TCTCAATTCCTCTTCAAGAGA Arborophila_ardens GTTAATCTGAGACTTTTTTTAACCAAAG-TCGTGATTCCTCTTCAAGAGA Arborophila_brunneopectus GTTAATCTGAGACTTTTTTTAACCAAAG-TTGTGATTCCTCTTCAAGAGA Gallus_gallus GTTAATCTGAGAC-TTTTTTAAGCAAAG-TCTCAATTCCTCTTCAAGAGA Anas_platyrhynchos GTTAATCTGAGAC-TTTTTAAAGCAAATCTCTTGATTCCTCTGCAAGACA Arborophila_rufipectus CAGACAGTGATCCTTTCTATCTAAACAGAAGTCTTAAAGTCCCCGATGCT Chrysolophus_amherstiae CAGACAATGATCCTTTCTATTTAAACAAAAGCCTTAAGATCCCCCGTGCT Lophophorus_lhuysii CAAACAATGATCCTTTCTATTTAGACAGAAGCCTAAGCAACCCCGATGCT Meleagris_gallopavo CAGACAACGATCCTTTCTATTTAGACAGAAGTCTTAAAGTCACGATTGCT Phasianus_colchicus CAGACAATGACCTTCTGTATTTAAACAAAAGCCTTAAGATCCCCCGTGCT Pucrasia_macrolopha CAGACCATGATCCTTTCTATTTAAACAAAAGCCTAAGAAACCCCGATGCT Syrmaticus_reevesii CAGACAATGATCCTTTCTATTTAAACAAAAGCCTTAAGATCCCCCGTGCT Tetraophasis_szechenyii CAGACAATGATCCTTTCTATTCAGACAGAAGCCTTAAGATCCCCGATGCT Tragopan_temminckii CAGACAATGATCCTTTCTATTTAGACAGAAGCCTTAAGACCCCCCGTGCT Arborophila_ardens CAGACAGTGATCCTTTCTATCTAAAGAGAAGCCTTAAGATCCCCGAT-CT Arborophila_brunneopectus CAGACAGTGATCCTTTCTATCTAAAGAGAAGCCTTAAGATCCCCGATGCT Gallus_gallus CAGACAATGATCCTTCCTATTTAAACAGAAGCCTTAAAGTCAGGATTGCT Anas_platyrhynchos CAGATAACGATCCTTTCTATTTAAACAGGAGGTTTAAAGAGGCT--TGCT Arborophila_rufipectus CCAGCTTTTCGCTATTCCAAACATTCTGCAGGCCCCTCCTCTTCTGTTGC Chrysolophus_amherstiae CCAGCTTTTCGCTATTCCAAACATTCTGCAGGCCCCCCCTCTTCTGCTGC Lophophorus_lhuysii CCAGCTTTTCGCTATTCCAAACATTCTGCAGGCCCCTCCTCTTCTGCTGC Meleagris_gallopavo CCAGCTTTTCGCTATTCCAAACATTCTGCAGGCCCCTCCTCTTCTGCTGC Phasianus_colchicus CCAGCTTTTCGCTATTCCAAAC-TTCTGCAGGCCCCTCCTCTTCTACTGC Pucrasia_macrolopha CCAGCTTTTCGCTATTCCAAACATTCTGCAGGCCCCTCCTCTACTGCTGC Syrmaticus_reevesii CCAGCTTTTCGCTATTCCAAACATTCTGCAGGCCCCTCCTCTTCTACTGC Tetraophasis_szechenyii CCAGCTTTTCGCTATTCCAAACATTCTGCAGGCCCCTCCTCTTCTGCTGC Tragopan_temminckii CCAGCTTTTCGCTATTCCAAACATTCTGCAGGCCCCTCCTCTTCTGCTGC Arborophila_ardens CCAGCTTTTCGCTATTCCAAACATTCTGCAGGCCCCTCCTCTTCTGTTGC Arborophila_brunneopectus CCAGCTTTTCGCTATTCCAAACATTCTGCAGGCCCCTCCTCTTCTGTTGC Gallus_gallus CCAGCTTTTCGCTATTCCAAACATTCTGCAGGCCCCTCCTCTTCTGCTGC Anas_platyrhynchos CCAGCTTTTCGCTATTCCAAACATTTCGCAGGCCCCTCCTCTGCTGCTGC Arborophila_rufipectus TCGAGTTTTAGCCCTTTGTGTACTTCGCGCTCGCAGACTTTTCCAGTTCC Chrysolophus_amherstiae TCAAGTTTTAGCCCTTTGTGTACTTCGCGCTCACAGACTTTTCCAGTTCC Lophophorus_lhuysii TCAAGTTTTAGCCCTTTGTGTACTTCGCGCTCACAGACTTTTCCAGTTCC Meleagris_gallopavo TTAAGTTTTAGCCCTTTGTGTACTTCGCGCTCGCAGACTTTTCCAGTTCC Phasianus_colchicus TCAAGTTTTAGCCCTTTGTGTACTTCGCGCTCACAGACTTTTCCAGTTCC Pucrasia_macrolopha TCAAGTTTTAGCCCTTTGTGTACTTCGCGCTCACAGACTTTTCCAGTTCC Syrmaticus_reevesii TCAAGTTTTAGCCCTTTGTGTACTTCGCGCTCACAGACTTTTCCAGTTCC Tetraophasis_szechenyii TCAAGTTTTAGCCCTTTGTGTACTTCGCTCTCACAGACTTTTCCAGTTCC Tragopan_temminckii TCAAGTTTTAGCCCTTTGTGTACTTCGCGCTCACAGACTTTTCCAGTTCC Arborophila_ardens TCGAGTTTTAGCCCTTTGTGTACTTCGCGCTCGCAGACTTTTCCAGTTCC Arborophila_brunneopectus TCGAGTTTTAGCCCTTTGTGTACTTCGCGCTCGCAGACTTTTCCAGTTCC Gallus_gallus TCAAGTTTTAGCCCTTTGTGTACTTCGCGCTCGCAGACTTTTCCAGTTCC Anas_platyrhynchos TCAAGTTTTAGCCCTTTGTGCACTCGGCGCTCGCAGGCTTTTCCAGTTCC Arborophila_rufipectus ATTCCTCAGATTTTCCTTGGTCTCAGCTTTCAGCCCAAATTTCCACATGT Chrysolophus_amherstiae ATTCCTCAGATTTTCCTTGGTCTCAGCTTTCAGCCCATATTTCCACGTGT Lophophorus_lhuysii ATTCCTCAGATTTTCCTTGGTCTCAGCTTTCAGCCCATGTTTCCACGTGT Meleagris_gallopavo ATTCCTCAGATTTTCCTTGGTCTCAGCTTTCAGCCCATATTTCCACGTGT Phasianus_colchicus ATTCCTCAGATTTTCCTTGGTCTCAGCTTTCAGCCCATATTTCCACATGT Pucrasia_macrolopha ATTCCTCAGATTTTCCTTGGTCTCAGCTTTCAGCCCATATTTCCACGTGT Syrmaticus_reevesii ATTCCTCAGATTTTCCTTGGTCTCAGCTTTCAGCCCATATTTCCACGTGT Tetraophasis_szechenyii ATTCCTCAGATTTTCCTTGGTCTCAGCTTTCAGCCCATATTTCCACGTGT Tragopan_temminckii ATTCCTCAGATTTTCCTTGATCTCAGCTTTCAGCCCATATTTCCACGTGT Arborophila_ardens ATTCCTCAGATTTTCCTTGGTCTCAGCTTTCAGCCCAAATTTCCACATGT Arborophila_brunneopectus ATTCCTCAGATTTTCCTTGGTCTCAGCTTTCAGCCCAAATTTCCACATGT Gallus_gallus ATTCCTCAGATTTTCCTTGGTCTCAGCTTTCAGCCCAAATTTCCACGTGT Anas_platyrhynchos ATTCCTCAGATTTTCCTTGGTCTCAACTTTCAACTGAAATTTCCACGTGT Arborophila_rufipectus CTGGGCACGCATGCCGAGCATCGCAGCTCCCACTGTGCCTTATGGGTGCC Chrysolophus_amherstiae CCAGGCAGGCATGCTGAGCATCGCAGCTCCCGCTGTGCCTTACGGGTGCC Lophophorus_lhuysii CCAGGCAGGCATGCTGAGCATCGCAGCTCCCGCTGTGCTTTACGGGTGCC Meleagris_gallopavo CCAGGCAGGCATGCTGAGCATCGCAGCTCCCGCTGTGCCTTACGGGTGCC Phasianus_colchicus CCAGGCAGGCACGCTGAGCATCGCAGCTTCCGCTGTGCCTTACGGGTGCC Pucrasia_macrolopha CCAGGCAGGCATGCTGAGCATCGCGGCTCCCGCTGTGCCTTACGGGTGCC Syrmaticus_reevesii CCAGGCAGGCATGCCGAGCATCGCAGCTCCTGCTGTGCCTTACGGGTGCC Tetraophasis_szechenyii CCAGGCAGGCATGCTGAGCATCGCAGCTCCCGCTGTGCCTTACGGGTGCC Tragopan_temminckii CCAGGCAGGCATGCTGAGCATCGCAGCTCCCTCTGTGCCTTACGGGTGCC Arborophila_ardens CTGGGCACGCATGCCGAGCATCGCAGCTCCCACTGTGCCTTACGGGTGCT Arborophila_brunneopectus CTGGGCACGCATGCCGAGCATCGCAGCTCCCACTGTGCCTTACGGGTGCT Gallus_gallus CTGGGCAGGCATGCTGAGCATCGCAGCTCCCACTGTGCCTTACGGGTGCC Anas_platyrhynchos CCAGGCGGGCTTGCTCAACTTTCCAGCTCGCACCGTGCCTTATGGCTGAC Arborophila_rufipectus TCCACCTGCTGGCTGCTCAGCCCGGCCTTCCTACTGCAGAGACCATGGGG Chrysolophus_amherstiae TCCACCTGCTGGCTGCTCGGCCTGGCTTTCCTACAGCAGGGACCATGGGG Lophophorus_lhuysii TCCACCTGCTGGCTGCTTGGCC-GGCTTTCCTACAGCAGGGACCATGGGG Meleagris_gallopavo TCCACCTGCTGGCTGCTCGGCCTGGCTTTCCTACAGCAGGGACTGTGGGG Phasianus_colchicus TCCACCTGCTGGCTGCTCAGCCTGGCTTTCCTACAGCAGGGACCATGGGG Pucrasia_macrolopha TCCACCTTCTGGCTGCTCGGCC---------TACAGCAGGGACCATGGGA Syrmaticus_reevesii TCCACCTGCTGGCTGCTCGGCCTGGCTTTCCTACAGCAGGGACCATGGGG Tetraophasis_szechenyii TCCACCTGCTGGCTGCTCGGCCCGGCTTTCCAACAGCAGGGACCGTGGGG Tragopan_temminckii TCCACCTGCTGGCTGCTCGGCCCGGCTTTCCTACAGCAGGGACCATGGGG Arborophila_ardens TCCACCTGCTGGCTGCTCAGCCTGGCCTTCCTACTGCAGGGACCGTGGGG Arborophila_brunneopectus TCCACCTGCTGGCTGCTCAGCCTGGCCTTCCTACTGCAGGGACCGTGGGG Gallus_gallus TCCACCTGCTGGCTGCTCGGCCCGGCTTTCCTACTGCAGGGACCGCGGGG Anas_platyrhynchos TCCGCCTGCTGGCTGCTCAGCCCGGCATTGCTACGGAAGG---------- Arborophila_rufipectus TGAGCTGCTCACACCACAGAAT--CAGAGTACCCCAAACTGGAAGGACCC Chrysolophus_amherstiae TGAGCTGCTCACACCACAGAATTACAGAGTACCCCAAACTGGAAGGACCC Lophophorus_lhuysii TGAGCTGCTCACACCACAGAATAACAGAGTACCCCAAACTGGAAGGACCC Meleagris_gallopavo TGAGCTGCTCACACCACAGAATTACAGAGTACCCCAAACTGGAAGGACCC Phasianus_colchicus TGAGCTGCTCACACCACAGAATTACAGAGTACCCCAAACTGGAAGGACCC Pucrasia_macrolopha TGAGCTGCTCACACCGCAGAATTACAGAGTACCCCAAACTGGAAGGACCC Syrmaticus_reevesii TGAGCTGCTCACACCACAGAATTACTGAGTACCCCAAACTGGAAGGACCT Tetraophasis_szechenyii TGAGCTGCTCACACCACAGAATAACAGAGTACCCCAAACTGGAAGGACCC Tragopan_temminckii TGAGCTGCTCACACCACAGAATTACAGAGTACCCCAAACTGAAAGGACCC Arborophila_ardens TGAGCTGCTCACACCACGGAAT--CAGAGTACCCCA-------------- Arborophila_brunneopectus TGAGCTGCTCACACCACGGAAT--CAGAGTACCCCA-------------- Gallus_gallus TGAGCTGCTCACACCACAGAACTACAGAGCACCCCAAACCGGAAGGACCC Anas_platyrhynchos ------------------------------ACCCT--------------- Arborophila_rufipectus ATAAGGATCAGTGAGTCCTGCTGATGGCTCCACATCGGACAGCCCAAAAT Chrysolophus_amherstiae GTAATGATCATCGAGTCCAACTGATAGC--CACATAGGAACACCCAAAAT Lophophorus_lhuysii ATAATGATCATCGAGTCCAACTGATGGCTCCACATAGGAACACCCAAAAT Meleagris_gallopavo GTAATGATCATCAAGTCCAACTGATGGCTCCACGTAGTAACACCCAAAAT Phasianus_colchicus ATAATGATCATCGAGTCCAACTGATGGCTCCACATAGGAACACCCAAAAT Pucrasia_macrolopha ATTATGATCATCGAGTCCAACTGG------CTCATAGGAACACCCAAATT Syrmaticus_reevesii GTAATGATCATCGAGTCCAACTGATGGCTCCACATAGGAACACCCAAAAT Tetraophasis_szechenyii ATAATGATCATCGAGTCCGACTGATGGCTCCACATAGGAACACCCAAAAT Tragopan_temminckii ATAATGATCATCGGATCCAACTGATGGCTCCACATAGGAACATCCAAAAT Arborophila_ardens -TAAGGATCAGTGAGTCCTGCTGATGGCTCCACATCGGGCAGCCCAAAAT Arborophila_brunneopectus -TAAGGATCAGTGAGTCCTGCTGATGGCTCCACATCGGACAGCCCAAAAT Gallus_gallus ATAACGATCGTCAAGTCCAACTGATGGCTCCACACAGGACCAGCCAAAAT Anas_platyrhynchos -TAAGGATCATCAAGTCCAACTCTTGACACCGCACAGGTCTACCCAAAAG Arborophila_rufipectus TCAAACCCTACGTCTGAGAGCATCATCCAAATATTTGAAGCTGCGAGCAC Chrysolophus_amherstiae TCAAATCCTGTGTCTGAGAGCATCCTCCAAACATTTGGGGCTGTGAGCAC Lophophorus_lhuysii TCAGATCCTATGTCTGAGAGCGTCCTCCAAACATTTGGGGCTGTGAGCGC Meleagris_gallopavo TCAAATCCTATATCTGAGAGCGTCCTCCAAACATTTGGGGCTGTGAGCGC Phasianus_colchicus TCAAATCCTATGTCTGAGAGCATCCTCCAAACATTTGGGGCTGTGAACAT Pucrasia_macrolopha TCAAATCCTATGTCTGAGAGCATCCTCTAAACATTTGGGGCTGTGAGCGC Syrmaticus_reevesii TCAAATCCTGTGTCTGAGAGCATCCTCCAAACATTTGGGGCTGTGAGCAC Tetraophasis_szechenyii TCAAATCCTATGTCTGAGAGCATCCTCCAAACATTTGGGGCTGTGAGCGC Tragopan_temminckii TCAAATCCTATGTCTGAGAGCATCCTCCAAACATTTGGGGCTGTGAGCGC Arborophila_ardens TCAAACCCTCCGTATGAGAGCACCATCCAAATATTTGAAGCTGTGAGCAC Arborophila_brunneopectus TCAAACCCTACGTCTGAGAGCATCATCCAAATATTTGAAGCTGCGAGCAC Gallus_gallus TCAAATCCCATGTCTGAGAGCGTCCTCCAAACATTTGGGGCTGCGAGCGC Anas_platyrhynchos TTCAGACCAATGT------------------------------------- Arborophila_rufipectus TGGCCTTGGGAGCCCATTCCATGCCCACCACCCACTGGTGAGGAACCCCA Chrysolophus_amherstiae TGTCCTGCGGAGCCCATTCTGTGCCCACCACCCACTGGTGGGGAGCCCCA Lophophorus_lhuysii TGCCCTGCGGAGCCCGTTCCGTGCCCATCACCCGCTGGTGGGGAGCCCCA Meleagris_gallopavo TGCCCTGTGGAGCCCGTTCTGTGCCCACCACCCACTGATGGGGAGCCCCA Phasianus_colchicus TGCCCTGCGGAGCCCGTTCTGTGCCCATCACCCACTGGTGGGGAGCCCCA Pucrasia_macrolopha TGCCCTGCAGAGCCCGTTCTGTGCCCACCACCCACTGGTGGGGAGCCCCA Syrmaticus_reevesii TGCCCTGCGGAGCCCGTTCTGTGCCCACCACCCACTGGTGGGGAGCTCCA Tetraophasis_szechenyii TGCCCTGCGGAGCCCGTTCCATGCCCATCACCCGCTGGTGGGGAGCCCTA Tragopan_temminckii TGCCCTGCGGAGCCTGTTCYGTGCCCACCACCCACTGGTGGGGAGCCCCA Arborophila_ardens TGGTCTTGGGAGCCCATTCCATGCCCACCACCCACTGGTGAGGAACCCCA Arborophila_brunneopectus TGGCCTTGGGAGCCCATTCCATGCCCACCACCCACTGGTGAGGAACCCCA Gallus_gallus TGCCCTGGGGAGCCCATTCTGTGCCCACCACCCACTGGTGGGGAGCTCCA Anas_platyrhynchos -------------------------------------------------- Arborophila_rufipectus GTTTATAGGGAAATCATCAATACATGCCGCATCTGCACAAATCCTAAGGG Chrysolophus_amherstiae CTTTATAGGAAAATCCCCCATAGACGCCACATCTACACAGATCCTAAGAG Lophophorus_lhuysii CTTTATAGGGAAATCCCCCATAGATGCCACATCTACACAAATCCTAAGAG Meleagris_gallopavo CTTTATAGGGAAATCCTCCATAGATGCCACATCTACACAAATCCTAAGAG Phasianus_colchicus CTTTATAGGAAAATCCCCCTTAGATGCCATATCTACACAGATCCTAAGAG Pucrasia_macrolopha CTTTATAGGGAAATCCCCCATACATGCCATATCTACACAAATCCTAAGAA Syrmaticus_reevesii CTTTATAGGAAAATCCCCCATAGATGCCACATCTACACAGATCCTAAGAG Tetraophasis_szechenyii CTTTATAGGGAAATCCCCCATAGATGCCACATCTACACAAATCCTAAGAG Tragopan_temminckii CTTTATAGGGAAATCCCCCATAGATGCCACATCTACACACATCCTAAGAG Arborophila_ardens GTTTATAGGGAAATCCTCAACACATGCCACATCTGCACAAATCCCAAGGG Arborophila_brunneopectus GTTTATAGGGAAATCCTCAAGACATGCCACATCTGCACAAATCCCAAGGG Gallus_gallus CTTTGTAGAGAAATCCCCCATAAATGCCACGTCTGCACAAATCCTAAGAG Anas_platyrhynchos ----------AAATCCCCTAAATATGCCACATCTGCACTGATCCTCAGAG Arborophila_rufipectus TTTGC--AAGAACCTGATGTCTGCATGAGCACAGAGCCAGCTGGGCCGAG Chrysolophus_amherstiae TTTGCCTAAAAACCTGATGTGTGCATGAGTGCAGGGCCAGCTGGGATGAG Lophophorus_lhuysii TTTGCCTAAAAACCTGATGTGTGCACGAATGCAGAGCCAGCTGGGATGGG Meleagris_gallopavo TTTGCCTAAAAACCTGATGTGTGCACAAATGCAGAGCCAGCTGGGATGAG Phasianus_colchicus TTTGCCTAAAAACCTGATGTGTGCATGAGTGCAGAGCCAGCTGGGATGAG Pucrasia_macrolopha TTTGCCTAAAAACTTGATGCGTGCACGAATGCAGAGCCAGCTGGGATGAG Syrmaticus_reevesii TTTGCCTAAAAACCTGATGTGTGCATGAGTGCAGAGCCAGCTGGGATGAG Tetraophasis_szechenyii TTTGCCTAAAAACCCGATGTGTGCACAAATGCAGAGCCAGCTGGGATGGG Tragopan_temminckii TTTGCCTAAAAATCTGATGTGTGCACGAATGCAGAGCCAGCTGGGATGAG Arborophila_ardens TTTGC--AAGAACCTGATGTGTGCATGAGCACAGAGCCAGCTGGGCCGAG Arborophila_brunneopectus TTTGC--AAGAACCTGAGGTGTGCATGAGCACAGGGCCAGCTGGGCCGAG Gallus_gallus TTTGCCTAAAAACCTGATGTGTGCACGAGGCCAGAGCCAGCTGGGACGAG Anas_platyrhynchos TTTGCCTAACAAAATGATGTGTGCAGGAGCTCGGAGCCAGCTGGGTGAAG Arborophila_rufipectus AGAACCGATGGTCAGAGCACGGAGAAATCCTCTCCTTGTGACTCAGCACG Chrysolophus_amherstiae ATAACCGATGGTCAGAGCACAGAGAAATCCTCCCCTTGTGACTCAGTGCT Lophophorus_lhuysii ATAACCGATGGTCAGAGCACAGAGAAATCCTCCCCTTGTGACTCAGCGCT Meleagris_gallopavo ATAACCGATGGTCAGAGCACAGAGAAGTCCTCCCCTTGTGACTCAGCGCT Phasianus_colchicus ATAACCGATGGTCAGAGCACAGAGAAATCCTCCCCTTGTGACTCAGTGCT Pucrasia_macrolopha ATAACCGATGGTCAGAGCACAGAGAAATCCTCCCCTTGTGACTCAGCGCT Syrmaticus_reevesii ATAACCGATGGTCAGAGCACAGAGAAATCCTCCCCTTGTGACTCAGTGCT Tetraophasis_szechenyii ATAACCGATGGTCAGAGCACAGAGAAATCCTCCCCTTGTGACTCAGTGCT Tragopan_temminckii ATAACCGATGGTCAGAGCACAGAGAAGTCCTCCCCTTGTGACTCAGCGCT Arborophila_ardens AGAACCGACAGTCAGAGCACGGAGAAATCCTCTCCTTGTGACTCAGCACG Arborophila_brunneopectus AGAACCAACAGTCAGAGCACGGAGAAATCCTCTCCTTGTGACTCAGCACG Gallus_gallus AGAACTGACAGTGAGAGCACAGAGAAATCCTCTCCTTGTGACTCAGCGTG Anas_platyrhynchos AGGACCGAATGTCAGAGCACAAAGAAATCCTTATCTCGTGATTCAGCGTG Arborophila_rufipectus GCATCGAGGCTCT-GCTTAACCTTCAGCCCAGGAAATATCACTGCAGTCC Chrysolophus_amherstiae GCATTGAGGCTCTTGCTTAACCTTCAGCCCAGGAAATATCAGTGCAGCCC Lophophorus_lhuysii GCACTGAGGCTCTTGCTTAACCTTCAGCCCAGGAAATATCACTGCAGTCC Meleagris_gallopavo GCATTGAGGCTCTTGCTTAACCTTCAGCCCAGGAAATATCACTGCAGTCC Phasianus_colchicus GCGTTGAGGATCTTGCTTAACCTTCAGCCCAGGAAATATCACTGCAGCCG Pucrasia_macrolopha GCATTGAGGCTCTTACTTAACCTTCAGCCCAGGAAATATCACTGCAGTCC Syrmaticus_reevesii GCACTGAAGCTCTTGCTTAACCCTCAGCCCAGGAAATATCGCTGCAGTCC Tetraophasis_szechenyii GCATTGAGGCTCTTGCTTAACCTTCAGCCCAGGAAATATCACTGCAGTCC Tragopan_temminckii GCATTGAGGCTCTTGCTTAACCTTCAGCCCAGGAAATATCGCTGCAGTCC Arborophila_ardens GCACTGAGGCTCT-GCTAA--CATCAGCCCAGGAAATATCACTGCAGTCC Arborophila_brunneopectus GCACTGAGGCTCT-GCTAA--CCTCAGCCCAGGAAATATCACTGCAGTCC Gallus_gallus GCATTGAGGTTCTTGCTTAACCTTCAGCCCAGGAAATATCACTGCAGTCC Anas_platyrhynchos ACATTTAGGTGCTTCCCTAACCTTCAGCCCAGGAAATATCATGGCAATCA Arborophila_rufipectus TGAGTTGTTTCACAAAGATCTCTGCCAAAAGTCCATGCAGAGCATTGAGA Chrysolophus_amherstiae GGAGTTGTTTC-CAAAGATCTCTGCCAAAAGTCCATGCAGAGCATTGAGA Lophophorus_lhuysii TGAGTTGTTTA-CAA-GATCTCTGCCAAA-GTCCATGCAGAGCACTGAGA Meleagris_gallopavo CCAGTTGTTTCACAAAGATCTCTGCCAAAAGTCCATGCAGAGTATTGAGA Phasianus_colchicus GGAGTTGTTTC-CAA-GATCTCTGCCAAAAGTCCATGCAGAGCATTGAAA Pucrasia_macrolopha TGAGTTGTTTC-CAAAGATCTCTGCCAAAAGTCCATGCAGAGCATTGAGA Syrmaticus_reevesii GGAGTTGTTTC-CAAAGATCTCTGCCAAAAGTCCATGCAGAGCATTGAGA Tetraophasis_szechenyii GGAGTTGTTTA-CAA-GATCTCTGCCAAAAGTCCATGCAGAGCATTGAGA Tragopan_temminckii AGAGTTGTTTCACAAAGATCTCTGCCAAAAGTCCATGCAGAGCATTGAGA Arborophila_ardens TAAGTTGTTTC-CAAAGATCTCTGCCAAAAGTCCATGCAGAGCATTGAGA Arborophila_brunneopectus TAAGTTGTTTC-CAAAGATCTCTGCCAAAAGTCCATGCAGAGCATTGAGA Gallus_gallus CTAGTTGTTTCACAAAGATCTCTGCCAAAAGTCCATGCAGAGCATTGAGA Anas_platyrhynchos TTAGTTGTTTCACAAAGATCTCTGCTAAAAGTCCATGCAGAGCACTGAGG Arborophila_rufipectus AAACTTTCTGGAAAAAAAACACTGAGCGTTGGGCACAGATCGTCCTC-GG Chrysolophus_amherstiae AAACTTTCTTAAAAAAAAACATTGAGCGTCGGGCACAGATCGTCCTCCGG Lophophorus_lhuysii AAACTTTCTTAAAAAAAAACATTGAGCGTTGGGCACAGATCGTCCTCCGG Meleagris_gallopavo AAACTTTCTTAAAAAAAA-CATTGAGCGTTGGGCACAGATCGTCCTCCGG Phasianus_colchicus AAACTTTCTTAAAAAAAAACATTGAGCGTCGGGCACAGATCGTCCTCCGG Pucrasia_macrolopha AAACTTTCTTAAAAAAAAACATTGAGCGTTGGGCACAGATCGTCCTCCGG Syrmaticus_reevesii AAACTTTCTTAAAAAAAAACATTGAGCGTCGGGCACAGATCGTCCTCCGG Tetraophasis_szechenyii AAACTTTCTTAAAAAAAAACATTGAGCGTTGGGCACAGATCGTCCTCAGG Tragopan_temminckii AAACTTTCTTAAAAAACAACATTGAGCGTTGGGCACAGATCGTCCTCCAG Arborophila_ardens AAACTTTCTGAAAAAAAAACACTGAGCGTTGGGCACAGATCGTCCTC-GG Arborophila_brunneopectus AAACTTTCTGAAAAAAAAACACTGAGCGTTGGGCACAGATCGTCCTC-GG Gallus_gallus AAACTTTCTTAAAAAGCAGCACTGAGCGTTGGGCACAGATCGTCCTCCGG Anas_platyrhynchos AAACTTTCTCAAAAAAAAACACCTAGAGTTAGGCACAGATTGTCCTCCAG Arborophila_rufipectus CTTCTGAGGAGCGATCATTAAAACTTCAGAGGTGTTTCTCTCTCTGTTAG Chrysolophus_amherstiae CTTCTGAGAAACGATCATTAAAACTTCAGAGGTGTTTCTCTCTCTGTCAG Lophophorus_lhuysii CTTCTGAGAAACGATCATTAAAACTTCAGAGGTGTT-------CTGTCAG Meleagris_gallopavo CTTCTGAGAAATGATCATTAAAACTTCAGAGGTGTTTCTCTCTCTGTCAG Phasianus_colchicus CTTCTGAGAAACGATCATTAAAACTTCAGAGGTGTTTCTCTCTCTGTCAG Pucrasia_macrolopha CTTCTGAGAAACGATCATTAAAACTTCAGAGGTGTTTCTCTCTCTGTCAG Syrmaticus_reevesii CTTCTGAGAAACGATCATTAAAACTTCAGAGGTGTTTCTCTCTCTGTCAG Tetraophasis_szechenyii CTTCTGAGAAACGATCATTAAAACTTCAGAGGTATTTCTCTCTCTGTCAG Tragopan_temminckii CTTCTGAGAAACGATCATTAAAACTTCAGAGGTGTTTCTCTCTCTGTCAG Arborophila_ardens CTTCTGAGGAGCGATCATTAAAACTTCAGAGGTGTTTCTCTCTCTGTTAG Arborophila_brunneopectus CTTCTGAGGAGCGATCATTAAAACTTCAGAGGTGTTTCTCTCTCTGTTAG Gallus_gallus CTTCTGAGAAACGATCATTAAAACTTCAGAGGTGTTTCTCTCCCTGTTAG Anas_platyrhynchos CTTCTGAGAAGTAATCATTAAAACTTCTGAGATATTTCT----CTGCTAA Arborophila_rufipectus CAGCTCCCACGCTCCCGCCAGTTTCCAGGGCTTTGGCTGCTGAACACAAA Chrysolophus_amherstiae CAGCTCCCACGCTCCCGCCAGTTTCCAGGGCCTTGGCTGCTGAACACAGA Lophophorus_lhuysii CAGCTCCCACGCTCCCGCCAGTTTCCAGGGCCTTGGCTGCTGAACACAGA Meleagris_gallopavo CAGCTCCCACGCTCCCGCCAGTTTCCAGGGCCTTGGCTGCTGAACACAGA Phasianus_colchicus CAGCTCCCACGCTCCCGCCAGTTTCCAGGGCCTTGGCTGCTGAACACAGA Pucrasia_macrolopha CAGCTCCCACGCTCCCGCCAGTTTCCAGGGCCTTGGCTGCTGAACACAGA Syrmaticus_reevesii CAGCTCCCACGCTCCCGCCAGTTTCCAGGGCCTTGGCTGCTGAACACAGA Tetraophasis_szechenyii CAGCTCCCACGCTCCCGCCAGTTTCCAGGGCCTTGGCTGCTGAACACAGA Tragopan_temminckii CAGCTCCCACGCTCCCACCAGTTTCCAGGGCCTTGGCTGCTGAACACAGA Arborophila_ardens CAGCTCCCACGCTCCCGCCAGTTTCCAGGGCTTTGGCTGCTGAACGCAAA Arborophila_brunneopectus CAGCTCCCACGCTCCCGCCAGTTTCCAGGGCTTTGGCTGCTGAACACAAA Gallus_gallus CATCTCCCACGCTCCCTCCAGTTTCCAGGGCCTTGGCTGCTGAACACAGA Anas_platyrhynchos CATTTCCCAGCTTCTTGCCAATTTCCTGGGTCTAGACAGCTGAACACATA Arborophila_rufipectus ATCGTAGAATCATTCAGGTTGGAAAGATGCTCTTCAACCATCCACCTGCC Chrysolophus_amherstiae ATCATACAATCATTCAGGTCGGAAAGATCCAGTCCAACCATCCACCTACC Lophophorus_lhuysii ATCATACAATCATTCAGGTCGGAAAGATCCAGTCCAATCATCCACCTACC Meleagris_gallopavo ATCATACAATCATTCAGGTCGGAAAGATCCAGTCCAATCGTCCACCTACC Phasianus_colchicus ATCATACAATCATTCAGGTTGGAAAGATCCAGTCCAACCATCCACCTACC Pucrasia_macrolopha ATCATACAATCATTCAGGTCGGAAAGATCCAGTCCAATCGTCCACCTATC Syrmaticus_reevesii ATCATACAATCATTCAGGTCGGAAAAATCCAGTCCAACCATCCACCTAC- Tetraophasis_szechenyii ATCATACAATCATTCAGGTTGGAAAGATCCAGTCCAATCATCCACCTACC Tragopan_temminckii ATCATACAATCATTCAGGTCGGAAAGATCCAGTCCAGTCACCCATCTACC Arborophila_ardens ATCATAGAATCATTCAGGTTGGAAAGATGCTCTTCAACCATCCACCTGCC Arborophila_brunneopectus ATCATAGCATCATTCAGGTTGGAAAGATGCTCTTCAACCATCCAGCTGCC Gallus_gallus ATCGTAGAATCGTTCAGGTTGGAAAGATCCAGTCCAACCGTCCACCTACC Anas_platyrhynchos ATCCTAAGAACCTTCAGGTAGGAAATAAACCATCAAACCTACCACCTCCC Arborophila_rufipectus ACCAGCATTGCCCCCTGACCCGTGTCCCTAAGTCCCACATCTCCCTCAAA Chrysolophus_amherstiae ACCAGTACTGCCCCCTAATGCACATCCCTAAGTCCCACACCTCCCTCAAA Lophophorus_lhuysii ACCAGTATTGCCCCCTAACCCACGTCCCTAAGTCCCACACCTCCCTCAAA Meleagris_gallopavo ACCAGTACTGCCCCCTAACCCACATCCCCACGTCCCACACCTCCCTCAAA Phasianus_colchicus ACCAGTACTGCCC--------ACATCCCTAAGTCCCACACCTCCCTCAAA Pucrasia_macrolopha ACCAGTACTGACCCCTAACCCACATCCCTAAGTCCCACACCTCCTTCAAA Syrmaticus_reevesii ACCAGTACTGCCCCCTAACCCACATCCCTAAGTCCCACACCTCCCTCAA- Tetraophasis_szechenyii ACCAGTATTGCCCCCTAACCCACGTCTCTAAGTCCCACACCTCCCTCAAA Tragopan_temminckii ACCAGTATTGCCCCCTAACCCACGTCCCTAAGTCCCACACCTCCCTCAAA Arborophila_ardens ACCAGCATTGCCCCCTGACCCGTGTCCCTAAGTCCCACATCTCCCTCCAA Arborophila_brunneopectus ACCAGCATTGCCCCCTGACCCGTGTCCCTAAGTCCCACATCTCCCTCAAA Gallus_gallus AGCAGTACTGCCCCCTAACCCATGTCCCTAAGTCCCACACCTCCCTCATA Anas_platyrhynchos ACCTCGAGTGAAAC--------CATCACGAGCACCCACAACACCATCAAA Arborophila_rufipectus CACCTCCAGGCATGGTGATGCCACCACCTCCCTGTGCAGCCCATGCCGGT Chrysolophus_amherstiae CACCTCCAGGCACGGTGACCCCCC-AGCTCCCCATGCAGCCCGTGCCAGT Lophophorus_lhuysii CACCTCCAGGCACAGTGACCCCACCACCTCCCTGTGCAGCCTGTGCCAGT Meleagris_gallopavo CACCTCCAGGCATGGTGACCCCACCACCTCCCTGTGCAGCCCGTGTCAGT Phasianus_colchicus CACCCCCAGGCATGGTGACCCCCCCAGCTCCCCGTGCAGCCCATGCCAGT Pucrasia_macrolopha CCCCTCCAGGCATGGTGACCCCACCACCTGCCTGTGCAGCCCGTGCCAGT Syrmaticus_reevesii CACCTCCAGGCATGGTGACCCCCC-AGCTCCCCGTGCAGCCCGTGCCAGT Tetraophasis_szechenyii CACCTCCAGGCACAGTGACCCCACCACCTCCCTGTGCAGCCTGTGCCAGT Tragopan_temminckii CACCTCCAGGCACAGTGACCCCACCACCTCCCTGTGCAGCCCGTGCCAGT Arborophila_ardens CACCTCCAGGCATGGTGATGCCACCACCTCCCTGTGCAGCCCATGCCGGT Arborophila_brunneopectus CACCTCCAGGCATGGTGATGCCACCACCTCCCTGTGCAGCCCATGCCGGT Gallus_gallus CACCTCCAGGCACGGTGACCCCACCAACTCCCTATGCAGCCTGTGCCAGT Anas_platyrhynchos CGCCGCCAGGCAG------------------------------------- Arborophila_rufipectus GCCCAGCTGCTCTTTCAGAGACAAAATTCTCCCTAATACCCAACCTGTTG Chrysolophus_amherstiae GCCCAACCACTCTTTCGGAGACAAAATTCTCCCTAATTTCCAACCTGTTG Lophophorus_lhuysii GCCCGACCACTCTTTCAGAGACAAAATTCTCCCTAATATCCAACCTGTTG Meleagris_gallopavo GCCCGACCGCTCTTTTGGAGACAAAATTCTCCCTAATATCCAACCTGTTG Phasianus_colchicus GCCCAGCCGCTCTTTCAGAGACAAAATTCTCCCTAATATCCAACCTGTTG Pucrasia_macrolopha GCCCAACCACTCTTTTGGAGACAAAATTCTCCCTAATATCCAACCTGTTG Syrmaticus_reevesii GCCCAACCACTCTTTCGGAGACAAAATTCTGCCTAATTTCCAACCTGTTG Tetraophasis_szechenyii GCCTGACCACTCTTTCGGAGACAAAATTCTCCCTAATATCCAACCTGTTG Tragopan_temminckii GCCCAACCACTCTTTCGGAGACAAAATTCTCCCTAATATCCAACCTGTTG Arborophila_ardens GCCCGACTGCTCTTTCAGAGACAAAATTCTCCCTAATACCCAACCTGTTG Arborophila_brunneopectus GCCCGACTGCTCTTTCAGAGACAAAATTCTCCCTAATACCCAACCTGTTG Gallus_gallus GCCCCAACGCTCTTTCAGAGATAAA-TTGTCCCTCATATCCAATCTGTTG Anas_platyrhynchos -------------------------------------------------- Arborophila_rufipectus CAATATCCAACATCTCATATCCTTCACTCATCTGATCACAGCCTCACCAC Chrysolophus_amherstiae CAATATCCAACATCTCACATCCTTCACTCATCTGATCACAGCCTGATCAC Lophophorus_lhuysii CAATATCCAGCATCTCATATCCTTCACTCATCTGGTCACAGCCTTATGAC Meleagris_gallopavo CAATATCCGACATCTCATATCCTTCACTCATCTGATTGCGGCCTGATCAC Phasianus_colchicus CAATATCCAACATCTCACATCCTTCACTCATTTGATCACAGCCTGATCAC Pucrasia_macrolopha CAATATCCAGCATCTCATATCCTTCACTCATCTGATCACAGCCTGATCAC Syrmaticus_reevesii CAATATCCAACATCTCACATCCTTCACTCATCTGATCACAGCCTGATCAC Tetraophasis_szechenyii CAATATCCAACATCTCATATCCTTCACTCATCTGGTCACAGCCTGATCAC Tragopan_temminckii CAATATCCAACATCTCATATCCTTCACTCATCTGATCACAGCCTGACCAC Arborophila_ardens CAATATCCAACATCTCATATCCTTCACTCATCTGATCACAGCCTCACCAC Arborophila_brunneopectus CAATATCCAACATCTCATATCCTTCACTCATCTGATCACAGCCTCACCAC Gallus_gallus CAACACTCAACATCTCATATCCTTCACTCATCTGACTGCAGCCTGATCAC Anas_platyrhynchos -------------------------------------------------- Arborophila_rufipectus CTTTGAAAGGTGCATCCCCCACTGCTGAGCACGAGGATGGGGGCTTCTGT Chrysolophus_amherstiae CTTTGAAAGGTGCATCCCCCACTGCTGAGCATGAGGATGGGGGTTCCTGT Lophophorus_lhuysii CTTTGAAAGGTGCATCCCCCACTGCTGAGCATGAGGATGGGGGTTCCTGT Meleagris_gallopavo TTTTGAAAGGTGCATCTCCAA-TGCTGAGCATGAGGATGGGGGTTCCTGT Phasianus_colchicus CTTCGAAAGGTGCATCCCCCACTGCTGAGCATGAGGATGGGGGTTCCTGT Pucrasia_macrolopha CTTTGAAAGGTGCATCCCCCACTGCTGAGCATGAGAATGGGGGTTCCTGT Syrmaticus_reevesii CTTTGAAAGGTGCATCCCCCACTGCTGAGCATGAGGATGGGGCTTCCTGT Tetraophasis_szechenyii CTTTGAAAGGTGCATCCCCCACAGCTGAGCATGAAGATGGGGGTTCCTGT Tragopan_temminckii CTCCAAAAGGTGCATCCCCCACTGCTGAGCATGAGGATGGGGGTTCCTGT Arborophila_ardens CTTTGAAAGGTGCATCCCCCACTGCTGAGCACGAGGATGGGGGCTTCTGT Arborophila_brunneopectus CTTTGAAAGGTGCATCCCCCACTGCTGAGCACGAGGATGGGGGCTTCTGT Gallus_gallus CTTCGAAAGGTGCATCCCCCACTGCTGAGCACGAGGATGGCGGTTCCTGT Anas_platyrhynchos -------------------------------------------------- Arborophila_rufipectus TC----------CCTCGCCCCCCGTCTCCATCCCATGGGACCACCCAGAG Chrysolophus_amherstiae TACTACCACCAGCCTCGTCCCGTGTGTCCATCCCATGCGACTGCCCAGAC Lophophorus_lhuysii TCCTACCACCAGCCTCGTCCCATGTGTCCATCCCATGCGA-TGCCCAGAC Meleagris_gallopavo TCCTACCACCAGCCTCGTCCCGTGTGCCCATCCCATGCGACTGCCCAGAC Phasianus_colchicus TACGACCACCAGCCTCGTCCCGTGTGTCCATCCCTTGTGACTGCCCAGAC Pucrasia_macrolopha TCCTACCAGCAGCCTCATCCCGTGTGTCCATCGCGTGTGACTGCCCAGAC Syrmaticus_reevesii TACTACCACCAGCCTCATCCCGTGTGTCCATCCCATGTGACTGCCCAGAC Tetraophasis_szechenyii TCCTACCACCAGCCTCGTCCCATGTGTCCATCCCATGCGA-TGCCCAGAC Tragopan_temminckii TCCTACCACCAGCCTCGTCCCATGTGTCCATCCCATGCGACTGCCCAGAC Arborophila_ardens TC----------CCTCGTCCTCCGTGTCCATCCCATGGGACCACCCAGAC Arborophila_brunneopectus TC----------CCTCGTCCTCCGTGTCCATCCCATGGGACCACCCAGAC Gallus_gallus TCCCACCACCAGCCTCATCCTGTGTGTCCATCCCATGGGACCGCCCAGAC Anas_platyrhynchos -------------CTTGTCCTGCACACCCACCCCAGG------------- Arborophila_rufipectus CAGCCCCACCTACCGGCAGCAAAGGGGTTAAAAGGCTTCACTGCTCCTTT Chrysolophus_amherstiae CAGCCCTACTGACCGGCAGCAAAGGGGTTAAAAGGCCTCACTGCTCCTTT Lophophorus_lhuysii CAGCCCCACTGACCGGCAGCAAAGGGGTTAAAAGGCCTCACTGCTCCTTT Meleagris_gallopavo CAGCCCTACTGACCAGCAGCAAAGGGATTAAAAGGCCTCACTGCTCCTTT Phasianus_colchicus CAGCCCTACTGACTGGCACCAAAGGGGTTAAAAGGCCTCACTGCTCCTTT Pucrasia_macrolopha CAGCTCTACTGATCAGCAGCAAAGGGGTTAAAAGGCCTCGCTGCTCCTTT Syrmaticus_reevesii CAGCCCTACTGACCGGCAGCAAAGGGGTTAAAAGGCCTCACTGCTCCTTT Tetraophasis_szechenyii CAGCCCCACTGACCAGCAGCAAAGGGGTTAAAAGGCCTCACTGCTCCTTT Tragopan_temminckii CAACCCCACTGACCGGCAGCAAAGGGGTTAAAAGGCCTCACTGCTCCTTT Arborophila_ardens CAGCCCCACCTACCGGCAGCAAAGGGGTTAAAAGGCTTCACTGCTCCTTT Arborophila_brunneopectus CAGCCCCACCTACCGGCAGCAAAGGGGTTAAAAGGCTTCACTGCTCCTTT Gallus_gallus CAACCCCACTGAGCAGCAGCAAAGGGGTTAAAAGGCCTCGCTGCTCCTTT Anas_platyrhynchos --------CCGGCCAGCAGGGAAGGGGCTGAAATGCCTTACTGCTCCTTT Arborophila_rufipectus TAGATCTGGGCTGCACTTATTTGCAGGCTGAATTTCCCAGAAGTCATGGC Chrysolophus_amherstiae TAGATCCGGGCTGCACTTGTTTGCAGGCTGAATTTCCCAGAAGTCATGGG Lophophorus_lhuysii TAGATCTGGGCTGCACTTGTTTGCAGGCTGAATTTCCCAGAAGTCATGGC Meleagris_gallopavo TAGATCTGGGCTGCACTCGTTTGCAGGCTGAATTTCCCAGAAGTCGTGGC Phasianus_colchicus TAGACCCGGGCTGCACTTGTTTGCAGGCTGAATTTCCCAGAAGTCATGGC Pucrasia_macrolopha TAGATCTGGGCTGCACTTGTTTGCAGGCTGAATTTCCCAGAAGTCATGGC Syrmaticus_reevesii TAGATCCGGACTGCACTTGTTTGCAGGCTGAATTTCCCAGAAGTCATGGC Tetraophasis_szechenyii TAGATCTGGGCTGCACTTGTTTGCAGGCTGAATTTCCCAGAAGTCATGGC Tragopan_temminckii TAGATCTGGGCTGCACTTGTTTGCAGGCTGAATTTCCCAGAAGTCATGGC Arborophila_ardens TAGATCTGGGCTGCACTTATTTGCAGGCTGAATTTCCCAGAAGTCATGGC Arborophila_brunneopectus TAGATCTGGGCTGCACTTATTTGCAGGCTGAATTTCCCAGAAGTCATGGC Gallus_gallus CAGATCTGGGCTGCACTTGTTTGCAGGCTGAATTTCCCAGAAGTCATGGC Anas_platyrhynchos GAGACCTGGGCTCCACTTGTTTGCAGACTGAATT-CCCAGAAGCCGAGGC Arborophila_rufipectus TTTTTACTAGCGGATCTGCTGTAGAACCATGTTGTTATAGATTGCAAGTT Chrysolophus_amherstiae TTTTTACTAGCGGAACTGCTGTAGAACCATGTTGTTATAGATTGCAAGTC Lophophorus_lhuysii TTTTTACTAGCGGATCTGCTGTAGAACCATGTTGTTATAGATTGCAAGTT Meleagris_gallopavo TTTTTACTAGCGGATCTGCTGTAGAACCATGTTGTTATAGATTGCAAGTT Phasianus_colchicus TTTTTACTAGCGGATCTGCTGTAGAACCATGTTGTTATAGATTGCAAGTT Pucrasia_macrolopha TTTTTACTAGCGGATCTGCTGTAGAACCATGTTGTTATAGATTGCAAGTT Syrmaticus_reevesii TTTTTACTAGCGGATCTGCTGTAGAACCATGTTGTTATAGATTGCAAGTT Tetraophasis_szechenyii TTTTTACTAGCGGATCTGCTGTAGAACCATGTTGTTATAGATTGCAAGTT Tragopan_temminckii TTTTTACTAGCGGATCTGCTGTAGAACCATGTTGTTATAGATTGCAAGTC Arborophila_ardens TTTTTACTAGCGGATCTGCTGTAGAACCATGTTGTTATAGATTGCAAGTC Arborophila_brunneopectus TTTTTACTAGCGGATCTGCTGTAGAACCATGTTGTTATAGATTGCAAGTC Gallus_gallus TTTTTACCAGCGGATCTGCTGTAGAACCATGTTGTTATAGATTGCAAGTT Anas_platyrhynchos TTTTTACGAGTGGATCTGCTGTAGAACCATGTTATTATAGATTGCAAGTT Arborophila_rufipectus CCTTAAAGGTCAGATA-CCCAATCACAAATACCTGTAAAAACCAA-TAGC Chrysolophus_amherstiae CC--AAAGGTCAGATAACA-AATACCAAATACCTGTAAAAAACAAATGGC Lophophorus_lhuysii CCTTAAAGGTCAGATAACACAATACCAAATACCTGTAAAAACCAA-TAAC Meleagris_gallopavo CCTTAAAGGTCAGATAACACAATACCAAATACCTGTAAAAAACAAATGGC Phasianus_colchicus CCT-AAAGGTCAGATAACACAATACCAAATACCTGTAAAAAACAAATGGC Pucrasia_macrolopha CCTTAAAGGTCAGATAACACAATACCAAATACCTGTAAAAAACAAATGGC Syrmaticus_reevesii CCT-AAAGGTCAGATAACACAATACCAAATACCTGTAAAAAACA------ Tetraophasis_szechenyii CCTTAAAGGTCAGATAAC-CAATACCAAATACCTGTAAAAACCAA-TAGC Tragopan_temminckii CTT-AAAGGTCAGATAACACAATACCAAATACCTGTAAAAACCAA-TAGC Arborophila_ardens C--TAAAGGTCAGATA-CACAATTCCAAATACCTGTAAAAACCAA-TAGC Arborophila_brunneopectus C--TAAAGGTCAGAAA-CACAATTACAAATACCTGTAAAAACCAA-TAGC Gallus_gallus CCTTAAAGGTCAGATAACACAATACCAAATACCTGTAAAAA-CAAATAGC Anas_platyrhynchos CCTTAAAGGTCAGATAACACAATACCAAATATTGGTAAAAGCCAA-TAGG Arborophila_rufipectus AGTATTCTTCAGTGGCTTTGCAAAACAATTCCTTGAGATCCATAGAATCA Chrysolophus_amherstiae AGTATTCTTCAATGGCTCCGCAAAACAATACCTTGAGATCCATAGAATCA Lophophorus_lhuysii AGTATTCTTCAGTGGCTCTGCAAAACAATACCTTGAGATCCATAGAATCA Meleagris_gallopavo AATATTCTTCAATGGCTCTGCAAAACAATACCTTGAGATCCATAGAATCA Phasianus_colchicus AGTATTCTTCAATGGCTCTGCAAAACAATACCTTGAGATCCATAGAATCA Pucrasia_macrolopha AATATTCTTCAATTGTTCTGCAAAACAACACCTTGAGATCCATGGAATCA Syrmaticus_reevesii -GTATTCTTCAATGGCTCTGCAAAACAATACCTTGAGATCCACAGAATCA Tetraophasis_szechenyii AGTATTCTTCAATGGCTCTGCAAAACAATACCTTGAGATCCATAGAATCA Tragopan_temminckii AGTATTCTTCAATGGCTCTGCAAAACAATACCTTGAGATCCATAGAATCA Arborophila_ardens AGTATTCTTCAATGGCTTTGCAAAACAATTCCTTGAGATCCACGGAATCA Arborophila_brunneopectus AGTATTCTTCAATGGCTTTGCAAAACAATTCCTTGAGATCCACAGAATCA Gallus_gallus AGTATTCTTCAATGGCTCTGCAAAACAATTCTTTGAGATCCATAGAATCA Anas_platyrhynchos AATATTTTTCAATGGGTCTGCAAAATAAC--------------------- Arborophila_rufipectus TAAAATCATAAAATATCCCAAGTTGGAAGGGAGCCATAAGGATC---AAG Chrysolophus_amherstiae TAAAATGGTAGAATATCCCAAGTTGGAAAGGAGCCATAAGGATCATCAAG Lophophorus_lhuysii TAAAATGGTGGAATATCCCAAGTTGGAAGGAAGCCATAAGGATCATCAAG Meleagris_gallopavo TAAAATGGTAGAATATCCCAAGTTGGAAGGGAGCCATAAGGATCATCAAG Phasianus_colchicus TAAAATGGTAGAATATCCCAAGTTGGAAGGGGGCCATAAGGATCATCAAG Pucrasia_macrolopha TAAAATGGTAGAATA-CCCAAATTG-AAGGGAGCCATAAGGATCATCAAG Syrmaticus_reevesii TAAAATGGTAGAATATCCCAAGATGGAAGGGAGCCACAAGGATCATCAAG Tetraophasis_szechenyii TAAAATGGTAGAATATCCCAAGTTGACAGGAAGCCATAAGGATCATCAAG Tragopan_temminckii TAAAATGGTAGAATATCCCAAGTTGGAAGGAAGCCATAAGGATCATGAAA Arborophila_ardens TAAAATCATAAAATATCCCAAGTTGGAAGGGAGCCATAAGGATC---AAG Arborophila_brunneopectus TAAAATCATAAAATATCCCAAGTTGGAAGGGAGCCATAAGGATC---AAG Gallus_gallus TAAAATCATAGAATATCCCAAGTTGGACGGGAGCCATAAGTATCATCAAG Anas_platyrhynchos -AGAATCATAGAATATCTTGAGTTGGAAGGGACCAACAAGGACCATCAAT Arborophila_rufipectus GCTGACTTTTGGTTCCACAAATGACCTACTCAAAAATCAGACCATATGCC Chrysolophus_amherstiae GCTGACTTCTGGCTCCACAGAGGACC-ACTCAAAAATCAGACCGTATGTC Lophophorus_lhuysii ACTGACTTCTGGCTCCACAGAGGACC-ACTCAAAAATCAGACCATATGTC Meleagris_gallopavo GCTGACTTCTGGCTCCACAAAGGACC-ACT-AAAAATCAGACCATATGTC Phasianus_colchicus GCTGACTTCTGGCTCCACAAAGGACC-ACTCAAAAATCAGACCGTATGTC Pucrasia_macrolopha GCTGACTGCTGGCTCCACAAAGGACC-ACTCAAAAATCGGACCATATGTC Syrmaticus_reevesii GCTGACTTCTGGCTCCACAAAGGATC-ACTCAAAAATCAGACCGTATGTC Tetraophasis_szechenyii GCTGACTTCTGGCTCCACAAAGGACC-ACTCAAAAATCAGACCATATGTC Tragopan_temminckii GCTGACTTCTGGCGCCACACACGACC-ACTCAAAAATCAGACCATATGTC Arborophila_ardens GCTGACTTTTGGTTCCATAAATGACCTACTCAAAAATCAGACCATATGCC Arborophila_brunneopectus GCTGACTTTTGGTTCCATAAATGACCTACTCAAAAATCAGACCATATGCC Gallus_gallus GCCAACTTCTGGCTCCACACAGAACC-ACTCAAAAATCAGACCATATGTT Anas_platyrhynchos TCCAACTCCTGACTCCACACAGAACC-ACTCAAAAATCAGACTACATGTC Arborophila_rufipectus TGAGAGAATTGTCCAAATGCTTCCAGAACTCTGGCAG-CTAAGTTCCATG Chrysolophus_amherstiae TGAGAGCATTGTCCAAATGCTTCCAGAATTCTGGCAG-CTCGGTGCTATG Lophophorus_lhuysii TGAGAGCATTGTCCAAATGCTTCCAGAACTCTGGCAG-CTCGGTGCCATG Meleagris_gallopavo TGAGAGCATTGTCCAAATGCTTCCAGAACTCTGGCAG-CTCGGTGCCATG Phasianus_colchicus TGAGAGCATTGTCCAAATGCTTCCAGAATTCTGGCAG-CTCGGTGCTATG Pucrasia_macrolopha TGAGAGCATTGTCCAAATGCTTCCAGAACTCTGGCAG-CTCGGTGCCATG Syrmaticus_reevesii TGAGAGCATTGTCCAAATGCTTCCAGAATTCTGGCAG-CTCGGTGCTATG Tetraophasis_szechenyii TGAGAGCATTGTCCAAATGCT----GAACTCTGGCAG-CTCGGTGCCATG Tragopan_temminckii TGAGAGGGTTGTCCAAATGCTTCCAGAACTCTGGCAG-CTCGGTTCCATG Arborophila_ardens TGAGAGAATTGTCCAAATGCTTCCAGAACTCTGGCAG-CTAAGTTCCATG Arborophila_brunneopectus TGAGAGAATTGTCCAAATGCTTCCAGAACTCTGGCAG-CTAAGTTCCATG Gallus_gallus TGAGAGCATTGTCCAAATGCTTCCAGAACTCTGGCAG-CTTGGTGCCATG Anas_platyrhynchos TGAGAGCGTTGTTCAAACACTTACTGTACTCCATCAGGCTCAGTGTTGTG Arborophila_rufipectus CTCAGTGCCCTAGGCAGCCT-TTCCAACACCCAACCATCCTCTTGGTGAA Chrysolophus_amherstiae ACCAGTGCCACAGGCAGCCT-TTCCAACAGCCAACCACCCTCTTGGTGAA Lophophorus_lhuysii ACGAGTGCCACAGGCAGCCT-TTCCAACACCCAGCCACCCTCTTGGTGAA Meleagris_gallopavo ACCAGTGCCACAGGCAGCCT-TTCCAACACCCAACCACCCTATTGGTGAA Phasianus_colchicus ACCAGTGCCACAGGCAGC-T-TTCCAACACCCAACAACCCTCTTGGTGAA Pucrasia_macrolopha ACCAGTGCCA-AGGCAGCCT-TCCCAACATCCAACCACCCTCTTGGTGAA Syrmaticus_reevesii ACCAGTGCCACAGGCAGCCT-TTTCAACACCCAACTACCCTCTTGGTGAA Tetraophasis_szechenyii ACCACTGCCAAAGGCAGCCT-TTCCAACACCCAGCCACCCTCTTGGTGAA Tragopan_temminckii ACCACTGCCAAAGGCAGCCT-TTCCAACACCCAGCCACCCTCTTGGTGAA Arborophila_ardens CTCAGTGCCCTAGGCAGCCT-TTCCAACACCCAACCACGCTCTTGGTGAA Arborophila_brunneopectus CTCAGTGCCCTAGGCAGCCT-TTCCAACACCCAACCACGCTCTTGGTGAA Gallus_gallus ACAAGTGCCCTGGGCGGCCT-TTCCAATACCCAATCACCCTCTTGGTGAA Anas_platyrhynchos ACCACTTCCCTGGGGAACCTACTCCAATGCCCAACCTCCCTCTTGGTGCA Arborophila_rufipectus TCCAGGCTTGGATGACCTTCTCACTCACGCAAACAGCTTTTTGAAGAGCA Chrysolophus_amherstiae TCCACACTTGGATGACATTCTCACTCATGCATACAGCTTTTTAAAGAGCA Lophophorus_lhuysii TCCACACTTGGATGACATTCTCACTCATGCATACAGCTTTTTAAAGAGCA Meleagris_gallopavo TCCACACTTGGATGACATTCTCACTCATGCATACAGCTTTTTAAAGAGCA Phasianus_colchicus TCCACACTTGGATGACATTCTCACTCATGCATACAGCTTTTTAAAGAGCA Pucrasia_macrolopha TCCACACTTGGATGACATTCTCA----TGCATACAGCTTTTTAAAGAGCA Syrmaticus_reevesii TCCACACTTGGATGACATTCTCACTCATGCATACAGCTTTTTGAAGAGCA Tetraophasis_szechenyii TCCACACTTGGATGACATTCTCACTCATGCATACAGCTTTTTAAAGAGCA Tragopan_temminckii TCCACACTTGGATGACATTCTCACTCATGCATACAGCTTTTTAAAGAGCA Arborophila_ardens TCCAGGCTTGGATGACCTTCTCACTCACGCAAACAGCTTTTTGAAGAGCA Arborophila_brunneopectus TCCAGGCTTGGATGACCTTCTCACTCACGCAAACAGCTTTTTGAAGAGCA Gallus_gallus TCCAGGCTTGGATGACATTCTCACTCATGCATACAGCTTTTTAAAGAGCA Anas_platyrhynchos -------------------------------------------------- Arborophila_rufipectus GCAGAGCCACGCTTATCTGGTCACCTCTTCCCTCCCCTTACGGGTGGGAT Chrysolophus_amherstiae GCAGAGCCACACATATCTGGTCACCCCTTCCCTCCAATTATGGGTAGGTT Lophophorus_lhuysii GCAGAGCCACACATATCTGGTCACCCCTTCCCTCCAATTATGGGTGGGTT Meleagris_gallopavo GCAGAGCCACACATATCTGGTTACCC-----CTCCAGTTATGGGTGAGTT Phasianus_colchicus GCAGAGCCACACATATCTGGTCACCCCTTCCCTCCAATTATGGGTAGATT Pucrasia_macrolopha GCAGAGCCACACATTTCTGGTCACCCTTTCTCTCCAATTATGGGTGGGTT Syrmaticus_reevesii GCAGAGCCACACATATTTGGTCACCCCTTCCCTCCAATTATGGGTGGGTT Tetraophasis_szechenyii GCAGAGCAACACGTATCTGGTCACCCCTTCCCTCCAATTATGGGTGGGTT Tragopan_temminckii GCAGAGCAACACATATCTGGTCACCCCTTCCCTCCAATTATGGGTGGGTT Arborophila_ardens GCAGAGCCACGCTTATCTGGTCACCTCTTCCCTCCCCTTATGGGTGGGAT Arborophila_brunneopectus GCAGAGCCACGCTTATCTGGTCACCTCTTCCCTCCCCTTATGGGTGGGAT Gallus_gallus GCAGAGCCACACATATCTGGTCGCCCCTTCCCTCCCCTCAGGGGTGGGAT Anas_platyrhynchos -------------------------------CTCCGTTCAAGGGTGGGCT Arborophila_rufipectus GTTATGCTAGGCTTCTGCCGTCTGGCTT-CCCCTGGTGAAAGCAGCCTGG Chrysolophus_amherstiae GTCAGGCTAGGCTTTTGCTGTCTGACTCCCCCCTGGTGAAAGCAGCCTGG Lophophorus_lhuysii GTCAGGCTAGGCTTCTGCTGTCTGGCTCACCCCTGGTGAAAGCAGCCTGG Meleagris_gallopavo GTCAGGCTAGACTTCTGCTGTCTGGCTCCCCCCTGGTGAAAGCAGCCTGG Phasianus_colchicus GTCAGGCGAGGCTTTTGCTGTCTGGCTCCCCCCTGGTGAAAGCAGCCTGG Pucrasia_macrolopha GTCAGGCTAGGCTTCTGCTGTCTGGCTCCCTCCTGGTGAAAGCAGCCTTG Syrmaticus_reevesii GTCAGGCTAGGCTTTTGCTGTCTGGCCCCCCCCTGGTGAAAGCAGCCTGG Tetraophasis_szechenyii GTCAAGCTAGGCTTCTGCTGTCTGGCTCACCCCTGGTGAAAGCAGCCTGG Tragopan_temminckii GTCAAGCTAGGCTTCTGCTGTCTGGCTCACCCCTGGTGAAAGCAGCCTGG Arborophila_ardens GTTATGCTAGGCTTCCGCCGTCTGGCTT-CCCCTGGTGAAAGCAGCCTGG Arborophila_brunneopectus GTTATGCTAGGCTTCCGCCGTCTGGCTT-CCCCTGGTGAAAGCAGCCTGG Gallus_gallus GTTACACTAGGCTTCTGCTGTCTGGCTCCCCCCTGGTGAAAGCAGCCTGG Anas_platyrhynchos GTAACTCCAGGCTTCTGCTGTCTGGCTT-CCACTGGTTAGAGCCGCCTAG Arborophila_rufipectus CTCTTGGTCAGAGGTTCTCCTATGTCGTCCCTTTGCCCTCCCTGGCGTAA Chrysolophus_amherstiae TTCTTGGTCAGAG-TAGCCCTTAGTCCTCCCTTTGCCCTCCCTGGCATAA Lophophorus_lhuysii TTCTTGGTCAGAGGTTGCCCTATGTCCTCCCTTTGCCCTCCCTGGCATAA Meleagris_gallopavo TTCTTGGTCAGAGGTTGCCCTATGTCCTCCCTTTGCCCTCCCTGGCATAA Phasianus_colchicus TTCTTGGTCAGAG-TTGCCCTTAGTCCTCCCTTTGCCCTCCCTGGCATAA Pucrasia_macrolopha ATCTTCATCAGAGGTTGCCCTTAGTCCTCCCTTTGCTCTCCCTGGCATAA Syrmaticus_reevesii TTCTTGGTCAGAG-TTGCCCTTAGTCCTCCCTTTGCCCTCCCTGGCATAA Tetraophasis_szechenyii TTCTTGGTCAGAGGTTGCCCTTAGTCCTCCCTTTGCCCTCCCTGGCATAA Tragopan_temminckii TTCTTGGTCAGAGGTTGCCCTATGTCCTCCCTTCGCCCTCCTTGGCATAA Arborophila_ardens CTGTTGGTCACAGGTTCTCCTAAGTCCTCCCTTTGCCCTCCCTGGCGTAA Arborophila_brunneopectus TTCTTGGTCAGAGGTTCTCCTATGTCCTCCCTTTGCCCTCCCTGCCGTAA Gallus_gallus TTCTTGGTCAGAAGTTGCCCTATGTCCTCCCTTTGCCCTGCCTGGCATAA Anas_platyrhynchos TTCTTAATCAGATGTTGCCCTATCTACTCGCTTTGCCCTCCCGGCAATAA Arborophila_rufipectus GCCAGAACTAGACCTAGAAAGAGTCTCCTTGGGAAGGAAATAGTGGCTGC Chrysolophus_amherstiae GCCAGATCTAGATCTAGAAAGGGTCTCCTTAGGAAGGAAATAATGGCTGC Lophophorus_lhuysii GCCAGATCTAGATCTAGAAAGGGTCTCCTTAGGAAGGAAATAGTGGCTGC Meleagris_gallopavo -CCAGATCTAGATCTAGAAAGGGTCTCCTTAGGAAGGAAATAGTGGCTGC Phasianus_colchicus GGCAGATCTAGATCTAGAAAGGGTCTCCTTAGGAAGGAAATAGTGGCTGC Pucrasia_macrolopha GCCAGATCTAGATCTAGAAAGGGTCTCCTCAGGAAGGAAATAGTGGCTGC Syrmaticus_reevesii GGCAGATCTAGATCTAGAAAGGGTCTCCTTAGGAAGGAAATAGTGGCTGC Tetraophasis_szechenyii GCCAGATCTAGATCTAGAAAGGGTCTCCTTAGGAAGGAAATAGTGGCTGC Tragopan_temminckii GCCAGATCTAGATCTAGAAAGGGTCTCCTTAGGAAGGAAATAGTGGCTGC Arborophila_ardens GCCAGAACTAGACCTAGAAAGAGTCTCCTTGGGAAGGAAATAGTGGCTGC Arborophila_brunneopectus GCCAGAACTAGACCTAGAAGGAGTCTCCTTGGGAAGGAAATAGTGGCTGC Gallus_gallus GCCAGATCTAGATCGAGAAAGGGTCTCCTTGGGAAGGAAATAGTGGCTGC Anas_platyrhynchos GCCAGGTCTAGAACAAGAAAGAGTCTCCTTGGGAAGGAAACAGTGGCTGC Arborophila_rufipectus ACAGTACTGTTTGTTACACAGGCATGCTGCAAATAGCTGAAAGGAAACAG Chrysolophus_amherstiae ACAGTACTGCTTGTTACACAGGCATGCTGCAAATAGCTGAAAGGAAACAG Lophophorus_lhuysii ACAGTACTGTTTGTTACACACGCATGCTGCAAATAGCTGAAA-----CAG Meleagris_gallopavo ACAGTGCTGTTTGTTACACAGGCACGCTGCAAATAGCTGACAGGAAACAG Phasianus_colchicus ACAGTACTGTTTGTTACACAGGCATGCTGCAAATAGCTGAAAGGAAACAG Pucrasia_macrolopha ACAGTACTGTTTGTTACACAGGCATGCTGCAAATAGCTGAAAGGAAACAG Syrmaticus_reevesii ACAGTACTGTTTGTTACACAGGCATGCTGCAAATAGCTGAAAGGAAACAG Tetraophasis_szechenyii ACAGTACAGTTTGTTACACAGGCATGCTGCAAATAGCTGAAAGGAAACAG Tragopan_temminckii ATAGTACTGTTTGTTACACAGGCATGCTGCAAATAGCTGAAAGGAAACAG Arborophila_ardens ACAGTACTGTTTGTTACACAGGCATGCTGCAAATAGCTGAAAGGAAACAG Arborophila_brunneopectus ACAGTACTGTTTGTTACACAGGCATGCTGCAAATAGCTGAAAGGAAACAG Gallus_gallus ACAGTACTGTTTGTTACACAGGCATGCTGCAAATAGCTGAAAGGAAACAG Anas_platyrhynchos ACGGTGCTATTTGTCATACAGGCATGCTATAGACAGCTGGAAGGAAACAG Arborophila_rufipectus AGGGGCTTATACATTTGCAGCAGAGCCACCCTAGCAAGAGAAGCAGTT-G Chrysolophus_amherstiae AGGGGCACATACATTTGTGGCAGAGCCACCCTAGCAAGAGAAGCAGTT-G Lophophorus_lhuysii AGAGGCATATACATTTGTGGCAGAGCCAGCCTAGCAAGAGAAGCAGTT-G Meleagris_gallopavo AGGCGCATATACATTTGTGGCAGAGCCACTCTAGCAAGAGAAGCAGTT-G Phasianus_colchicus AGGGGCATATACACTTGTGGCAGAGCCACCCTAGCAAGAGAAGCAGTT-G Pucrasia_macrolopha AGGGGCACATACATTTGTGACAGAGCCACCCTAGCAAGAGAAGCAGTT-G Syrmaticus_reevesii AGGGGCATATACATTTGTGGCAGAGCCACCCTAGCAAGAGAAGCAGTT-G Tetraophasis_szechenyii AGGGGCATATACATTTGTGGCAGAGCCAACCTAGCAAGAGAAGCAGTT-G Tragopan_temminckii AGGGGCATATACATTTGTGGCAGAGCCACCCTAGCAAGAGAAGCAGTT-G Arborophila_ardens AGGGGCTTATACATTTGCAGCAGAGCCACCCTAGCAAGAGAAGCAGTT-G Arborophila_brunneopectus AGGGGCTTATACATTTGCAGCAGAGCCACCCTAGCAAGAGAAGCAGTT-G Gallus_gallus AGAGGCACATACAATTGTGGCAGAGCCACCCTCGCAAGAGAAGCAGTTTG Anas_platyrhynchos AGGGG------CATTTGTGGCAGAGCCATCCTAGCAGGAGAAGGCTTT-G Arborophila_rufipectus GAATTTTCTTAGTCTATCAGTGCTTTTTACAGAATAGAAACACTCCTCTT Chrysolophus_amherstiae GAATTTTCTTAGTCTGTCAGGGCTTTTTACAGAATAGAAACACTCATCTT Lophophorus_lhuysii GAATTTTCTTAGTCTATCAGGGCTTTTTACAGAATAGAAACACTCATCTT Meleagris_gallopavo GAATTTTCTTAGTCTGTCAGGGCTTTTTACAGAATAGAAACACTCATCTT Phasianus_colchicus GAATTTTCTTAGTCTGTCAGGGCTTTTTACAGAATAGAAACACTCATCTT Pucrasia_macrolopha GAATTCTCTTAGTCTGTCAGGGATTTT-ACAGAATGGAAACACTCATCTT Syrmaticus_reevesii GAATTTTCTTAGTCTGTCAGGGCTTTTTACAGAATAGAAACACTCATCTT Tetraophasis_szechenyii GAATTTTCTTAGTCTATCAGGGCTTTTTACAGAATAGAAACACTCATCTT Tragopan_temminckii GAATTTTCTTAGTCCATCGGGGCTTTTTACAGAATAGAAACACTCATCTT Arborophila_ardens GAATTTTCTTAGTCTATCAGTGCTTTTTACAGAATAGAAACACTCCTCTT Arborophila_brunneopectus GAATTTTCTTAGTCTATCAGTGCTTTTTACAGAATAGAAACACTCCTCTT Gallus_gallus GAATTTTCTCGGTCTATCAGGGCTTTTTACAGAACAGAAAAACTCCTCTT Anas_platyrhynchos TAACTTTCTTGGTCTTTGAGGGCTTTTTGCAGGATGGAAATACTCCTCCT Arborophila_rufipectus TTAGGAAAAGGTTCTGCACCAAGAGATGTGATCAGGCATGGAACAAACTC Chrysolophus_amherstiae TTAGGAAAAGGTTATTTAACAAGAAGTGTGGTCAGGCATGGAACAAGCTC Lophophorus_lhuysii TTAGGAAAAGGTTATTTAACAAGAGGTGTGGTCAGGCATGGAACAAACTC Meleagris_gallopavo TTAGGGAAAAATAATATAACAAGAGGTGTGGTCAGGCACAGAACAAACTC Phasianus_colchicus TTAGGAAAAGGTTATTTAACAAGAGGTGTGGTCAGGCATGGCACAAGCTC Pucrasia_macrolopha TTAGGAAAAGGTTATTTAACAAGAGGTGTGGTCAGGCATGGAATAAACTC Syrmaticus_reevesii CTAGGGAAAGGTTATTTAACAAGAAGTGTGGTCAGGCATGGAACAAGCTC Tetraophasis_szechenyii TTAGGAAAAGGTTATTTAACAAGAGGTGTGGTCAGGCATGGAACAAACTC Tragopan_temminckii TTAGGAAAAGGTTATTTAACAAGAGGTGTGGACAGGCATGGAACAAACTC Arborophila_ardens TTAGGAAAAGGTTCTGCACCAAGAGCTGTGATCAGGCATGGAACAAACTC Arborophila_brunneopectus TTAGGAAAAGGTTCTGCACCAAGAGCTGTGATCAGGCATGGAACAAACTC Gallus_gallus TTAGGGAAAGGTTGTTTAACAAGAGGTGTGGTCAGGCATGGAGCAACCTC Anas_platyrhynchos TTAAAAA------------------------------------------- Arborophila_rufipectus CCCAGGGCAGCAGTCATGGCACCAAGCCTGCCAGAGAACAAGAAGTGTTT Chrysolophus_amherstiae CCCAGGGCAGCGGTCATGGCACCAAGCCTGCCAGAGCACAAGAAGCATTT Lophophorus_lhuysii CCCAGGGCAGCAGTCATGGCACCAAGCCTGCCAGAGTACAGGGAGCATTT Meleagris_gallopavo CCCAGGGCAGCAGTCATGGCACCAAGCCTGCCAGAGTACAAGAAGCATTT Phasianus_colchicus CCCAGGGCAGCAGTCATGGCACCAAGCCTGCCAGAGCACAAGAAGCATTT Pucrasia_macrolopha CCCAGGGCAGCAGTCATGGCACCAAGCCTGCCAGAGTACAAGAAGCATTT Syrmaticus_reevesii CCCAGGGCAGCAGTCATGGCACCAAGCCTGCCAGAGCACAAGAAGCATTT Tetraophasis_szechenyii CCCAGGGCAGCAGTCATGGCACCAAGCCTGCCAGAGTACAGGAAGCATTT Tragopan_temminckii CCCAGGGCAGCAGTCATGGCACCAAGCCTGCCAGAGTACAAAAAGCATTT Arborophila_ardens CCCAGGGCAGCAGTCATGGCACCAAGCCTGCCAGAGAACAAGAAGTGTTT Arborophila_brunneopectus CCCAGGGCAGCAGTCATGGCACCAAGCCTGCCAGAGAACAAGAAGTGTTT Gallus_gallus ACCAGGGCAGCAGTCGTGGCACCAAGCCTGCCAGAGTACAAGAAGTGTTT Anas_platyrhynchos ----------------------------T--------------------- Arborophila_rufipectus GGACAG---------AAATATAGTTTGATTTTTTTGGGGTAGTCTTGTGT Chrysolophus_amherstiae GGACAGTGCACTCAGAATTACAGTTTGATTTTTTT-GT-----CTTGTGT Lophophorus_lhuysii AGACAGTGCACTCAGAATTATAGTTTGACTTTTT--GTTTAGTCTTGTGT Meleagris_gallopavo GGACAGTGCACTCAGAAATATAGTTTGATTTTTTT-GTTTAGTCTTGTGT Phasianus_colchicus GGACAGTGCACTCAGAATTATAGTTTGGTTTTTT--GTTTAGTCTTGTGT Pucrasia_macrolopha GGACAGTGCACTCAGAATTATAGTTTGATTTTTTT-GTTTAGTCTTGCGC Syrmaticus_reevesii GGACAGTGCACTCAGAATTATAGTTTGATTTTTTT-GTTTAGTCTTGTGT Tetraophasis_szechenyii GGACAGTGCACTCAGAATTATAGTTTGATTTTTT--GTTTAGTCTTGTGT Tragopan_temminckii GGACAGTGCGCTCAGAATTATAGTTTGATTTTTTT-GTTTAGTCTTGTGT Arborophila_ardens GGGCAG---------AAATACAGTTTGATTTTTTTGGGGTAGTCTTGTGT Arborophila_brunneopectus GGGCAG---------AAATACAGTTTGATTTTTTTGGGGTAGTCTTGTGT Gallus_gallus GGGCAGTGCCCTCAGAAATATAGCTGATTTTTTGC-GGGTAGCCTTGTGT Anas_platyrhynchos -------------------------------------------------- Arborophila_rufipectus GAAGCCAGGAGCTGGACTAGATGACAACTGTGGGTCTCTTCCAACTCAGA Chrysolophus_amherstiae GAAGCCAGGAGTTGGACTTGATGATAACTGTGGGTCTCTTACAACTCAGG Lophophorus_lhuysii GAAGCCAGGAGTTGGACTTGATGACAATTGT------CATCCAACTCAGG Meleagris_gallopavo GAAGCCAGGAGTTGGACTTGATGACAACTGTGGGTCTCTTCAAACTCAGG Phasianus_colchicus GAAGCCAGGAGTTGGACTTGATGATAACTGTGGGTCTCTTACAACTCAGG Pucrasia_macrolopha AAAGCCAGGAGTTGGACTTGATGACAATTGTGGGTCTCTTCCAACTCAGG Syrmaticus_reevesii GAAGCCAGGAGTTGGACTTGATGATAATTGTGGGTCTCTTACAATTCAGG Tetraophasis_szechenyii GAAGCCAGGAGTTGGACTTGATGACAATTGTGGGTCTCTTCCAACTCAGG Tragopan_temminckii GAAGCCAGGAGTTGGACTTGATGACAACTGTGGGTCTCTTCCAACTCAGG Arborophila_ardens GAAGCCAGGAGCTGGACTTGATGACAACTGTGGGTCTCTTCCAACTCAGA Arborophila_brunneopectus GAAGCCAGGAGCTGGACTTGATGACAACTGTGGGTCTCTTCCAACTCAGA Gallus_gallus GAAGCCAGGAGTTGGACCTGATGACAACTGTGGGTCTCTTCCAACTCAGG Anas_platyrhynchos ----------------------------------------------CAGG Arborophila_rufipectus ATGTCCTCTATTTCTCTTTAAGCACAGCTTCAGTGGGAACAGAACACAGA Chrysolophus_amherstiae ATGTTCTGGAATTCTCTTTAAGCACAGCTTTAGTCGGGACAGAACACAGG Lophophorus_lhuysii ATGTTCTGTAATTCTCTTTAAGCAC-GCTTCAGTGGGGACAGAACACAGA Meleagris_gallopavo ATGTTCTGTAATTCTCTTTAAGCACAGCTTCAGTGGGGACAGAACACAGA Phasianus_colchicus ATGTTCTGTAATTCTCTTTAAGCACAGCTTCAGTGGGGACAG-------- Pucrasia_macrolopha ATGTTCTGTAATTCTCTTTAAGCACAGCTTCAGTGGGGACAGAACACAGA Syrmaticus_reevesii ATGTTCTGTAATTCTCTTTAAGCACAGCTTCAGTGGGGACAGAACACAGG Tetraophasis_szechenyii ATGTTCTGTAATTCTCTTTAAGCACAGCTTCAGTGGGGACAGAACACAGA Tragopan_temminckii ATGTTCTGTAATTCTCTTTAAGCACAGCTTCAGTGGGGACAGAACACAGA Arborophila_ardens ATGTCCTCTATTTCTCTTTAAGCACAGCTTCAGTGGGAACAGAACACAGA Arborophila_brunneopectus ATGTCCTCTATTTCTCTTTAAGCACAGCTTCAGTGGGAACAGAACACAGA Gallus_gallus ATGTTCTGTAATTCTGCTTAAGCACAGCTTCAGTGGGGACAGAACACAGA Anas_platyrhynchos ATGTACTATACTTCTCCTTAAGCAAAGCTTCAGTAGGGACAATGCACAGA Arborophila_rufipectus TTTCAGGCCCTACCAGCTTAGATGATAAACAGAGATGTGGAACCATTCAG Chrysolophus_amherstiae TTTCAGGCCCTACCAGCGTAGATGACAAACAGA-ATGTGGAACCTTTCAG Lophophorus_lhuysii TTTCAGGCCCTACCAGCTTAGATGACAAACAGA-ATGTGGAACCCTTCAG Meleagris_gallopavo TTTCAGGCCCTACCAGTTTAGATGACAAACAGA-ATGTGGAACCCTTCAG Phasianus_colchicus ------GCCCTACCAGTTTAGATGACAAACAGA-ATGTGGAACCTTTCAG Pucrasia_macrolopha TTTCAGGCCCTACCAGCTTAGATGACAAACAGA-ATGTGGAACCCTTCAG Syrmaticus_reevesii TTTCAGGACCTACCAGCTTAGATGACAAACAGA-ATGTGGAACCTTTCAG Tetraophasis_szechenyii TTTCAGGCCCTACCAGCTTAGATGACAAACAGA-ATGTGGAACCCTTCAG Tragopan_temminckii TTTCAGGTCCTACCAGCTTAGATGACAAACAGA-AGGTGGAACCCTTCAG Arborophila_ardens TTTCAGGCCCTACCAGCTTAGATGACAAACAGAGATGTGGAACCATTCAG Arborophila_brunneopectus TTTCAGGCCCTACCAGCTTAGATGACAAACAGAGATGTGGAACCATTCAG Gallus_gallus TTTCAGGCCCTACCAGCTTAGATGACAAACAGAGATGTGGAACCCTTCAG Anas_platyrhynchos TTTCAGGCCCCAGCAGCTCAAATAACAAGCAGAGATGAGGCTTCCTTCAG Arborophila_rufipectus CT-CAGCCTGTCCTCACCCCCAGGTGTTCAGGAGCAGCTAGAACTGATTC Chrysolophus_amherstiae CTCCAGCCTGTCCTCACACCCAGGTGCCCAGGAGCAGCTAGAGCTGAGTC Lophophorus_lhuysii CTCCAACCTGTCCTCACACCCAAGTGCTCAGGGGCAGCTAGAGCTGATTC Meleagris_gallopavo CTCCAGCCTGTCCTCACACCCAGGTGCTCAGGAGCAGCTAGAGCTGATTC Phasianus_colchicus CTCCAGCCTGTCCTCACACCCAGGTGCTCAGGAGCAGCTGGAGCTGATTC Pucrasia_macrolopha CTCCAGCCTGTCCTCACACCCAGGTGCTCAGGAGCAGCTAGAGCTGATTC Syrmaticus_reevesii CTGCAACCTGTCCTCACACCCAGGTGCTCAGGAGCAGCTGGAGCTGATTC Tetraophasis_szechenyii CTCCAGCCTGTCCTCACACCCAAGTGCTCAGGATCAGCTAGAGCTGATTC Tragopan_temminckii CTCCAGCCTGTCCTCACACCCAGGTGCTCAGGAGCAGCTAGAGCTGATTC Arborophila_ardens CT-CAGCCTGTGCTCACACCCAGGTGTTCAGGAGCAGCTAGAACTGATTC Arborophila_brunneopectus CT-CAGCCTGTCCTCACACCCAGGTGTTCAGGAGCAGCTAGAACTGATTC Gallus_gallus CTCCAGCCTGGCCTCACACCCAGGTGCTCAGGAGCAGCTAGAGCTGATTC Anas_platyrhynchos CTCCAGTCTGTTCTTGTCCCCAACTGCTCAGGAGCAGTCAGAGCTGGCTC Arborophila_rufipectus AGAGCACCTGCACAAGCAATTCTGTGAAACCCCACAGCTACAATGCTGTT Chrysolophus_amherstiae AGAGCACCTGCACAAG---TTCTGTGAAACCC-ACAGCTACAGTGCTGTT Lophophorus_lhuysii AGAGCACCTGCACAAGCAGTTCTGTGAAACCCCACAGCTACAATGCTGTT Meleagris_gallopavo AGAGCACCTCCACAAGTAGTTCTGTGAAACCCCACAGCTACAATGCTGTT Phasianus_colchicus AGAGCGCCTGCACAAG---TTCTGTGAAGCCTCCCAGCTACAATGCTGTT Pucrasia_macrolopha AGAGCACCTGCACAAGCAGTTCTGTGAAACCCCACAGCTACAATGCTGTT Syrmaticus_reevesii AGAGCGCCTGCACAAG---TTCTGTGAAGCCCCACAGCTACAATGCCGTT Tetraophasis_szechenyii AGAGCACCTGCACAAGCAGTTCTGTGAAACCCCACAGCTACAATGCTGTT Tragopan_temminckii AGAGCACCTGCACAAGCAGTTCTGTGAAACCCCACAGCTACAATGCTGTT Arborophila_ardens AGAGCACCTGCACAAGCAATTCTGTGAAACCCCACAGCTACAATGCTGTT Arborophila_brunneopectus AGAGCACCTGCACAAGCAATTCTGTGAAACCCCACAGCTACAATGCTGTT Gallus_gallus AGAGCACCTGCACAAGCAGTTCTGTGAAACCCCACAGCTACAGTGCTGTT Anas_platyrhynchos AGAGCACCTGCACAAGGGGTTTTGCAAAACTCCACAGCCACAATACTGTT Arborophila_rufipectus TCCTGAAAAAA--TGAACGATATCAACAGCGGACACTGGGACACGGTGCT Chrysolophus_amherstiae TCCTGAAAAAA--TGAACGACATCAACAGCGGGCACTGGGACACGGTGCT Lophophorus_lhuysii TCCTGAAAAAAA-TGAACGACATCAACAGCGGGCACTGGGACACGGTGCT Meleagris_gallopavo TCCTGAAAAAAA-TGAACGACATCAACAGCGGGCACTGGGACACGGTGCT Phasianus_colchicus TCCTGAAAAAAA-TGAAGGGCACTCATAGCGGGC-CTGGGACACGGTGCT Pucrasia_macrolopha TCCTGAAAAAAA-AGAACGACATCAACAGTGGGCACTGGGACACGGTGCT Syrmaticus_reevesii TCCTGAAAAAAAATGAATGGCACTAAC-GCGGGCACTGGGACACGGTGCT Tetraophasis_szechenyii TCCTGAAAAAAA-TGAACGACATCAACAGCGGGCACTGGGACACGGTGCT Tragopan_temminckii TCCTGAAAAAAAATGAACGACATCAACAGCGGGCACTGGGACACGGTGCT Arborophila_ardens TCCTGAAAAAA--TGAACGATATCA-CAGCGGAC-CTGGGACACGGTGCT Arborophila_brunneopectus TCCTGAAAAAA--TGAACGATATCAACAGCGGACACTGGGACACGGTGCT Gallus_gallus TCCTGCAAAAAA-TGAGCGACATCAACAGCGGGCACTGGGACACGGTGCT Anas_platyrhynchos ACCCACATAGAAAGGAGCGACATCAACAGCGGGCACTGGGACACGGTGCT Arborophila_rufipectus GCAGGCCATACAGTCGCTGAAGCTGCCCGACAAGACCCTCATCGATCTTT Chrysolophus_amherstiae GCAGGCCATACAGTCGCTGAAGCTGCCCGACAAGACCCTCATCGACCTCT Lophophorus_lhuysii GCAGGCCATACAGTCGCTGAAGCTGCCCGACAAGACCCTCATCGACCTCT Meleagris_gallopavo GCAGGCCATACAGTCGCTGAAGCTGCCCGACAAGACCCTCATCGACCTGT Phasianus_colchicus GCAGGCCATACAGTCGCTGAAGCTGCCCGACAAGACCCTCATCGACCTCT Pucrasia_macrolopha GCAGGCCATACAGTCGCTGAAGCTGCCCGACAAGACCCTCATCGACCTCT Syrmaticus_reevesii GCAGGCCATACAGTCGCTGAAGCTGCCCGACAAGACCCTCATCGACCTCT Tetraophasis_szechenyii GCAGGCCATACAGTCGCTGAAGCTGCCCGACAAGACCCTCATCGACCTCT Tragopan_temminckii GCAGGCCATACAGTCGCTGAAGCTGCCCGACAAGACCCTCATCGACCTCT Arborophila_ardens GCAGGCCATACAGTCGCTGAAGCTGCCCGACAAGACTCTCATCGATCTTT Arborophila_brunneopectus GCAGGCCATACAGTCGCTGAAGCTGCCCGACAAGACTCTCATCGATCTTT Gallus_gallus GCAGGCCATACAGTCGCTGAAGCTGCCCGACAAGACCCTTATCGACCTCT Anas_platyrhynchos GCAGGCCATACAGTCGCTGAAGCTGCCCGACAAGACCCTCATTGACCTCT Arborophila_rufipectus ATGAGCAGGTGGGCAGCATGAGCAGCATGCGACCTTCTCTAGGCCTCTTC Chrysolophus_amherstiae ACGAGCAGGTGGGCAGCACGAGCAGCGTGTGACTTTCTCTAGGCCTCTTC Lophophorus_lhuysii ACGAGCAGGTGGGCAGCACGAGCAGCGTGCGGCTTTCTCTAGGCCTCTTC Meleagris_gallopavo ACGAGCAGGTGGGCAGCACGAGCAACGTGCGACTTTCTCTAGGCCTCTTC Phasianus_colchicus ACGAGCAGGTGGGCAGCACGAGCAGCGTGTGGCTTTCTCTAGGCCTCTTC Pucrasia_macrolopha ACGAGCAGGTGGGCGGCATGAGCGGCGTGCAACTTTCTATAGGCCTCTTC Syrmaticus_reevesii ACGAGCAGGTGGGCAGCACGAGCAGCGTGCGACTTTCTCTAGGCCTCTTC Tetraophasis_szechenyii ACGAGCAGGTGGGCAGCACGAGCAGCGTGCGACTTTCTCTAGGCGTCTTC Tragopan_temminckii ACGAGCAGGTGGGCAGCACGAGCAGCGTGCGACTTTCTCTAGGCCTCTTC Arborophila_ardens ATGAGCAGGTGGGCAGCATGAGCAGCATGCGACCTTCTCTAGGCCTCTTC Arborophila_brunneopectus ATGAGCAGGTGGGCAGCATGAGCAGCATGCGACCTTCTCTAGGCCTCTTC Gallus_gallus ACGAGCAGGTGGGCAGCACGAGCAGCGTGCGACCTTCTCTAGGCCTTTTC Anas_platyrhynchos ACGAGCAGGTGGGCAGCAAGAGCCGCTTCCGACGAACTTATGCTCTATAC Arborophila_rufipectus TGCTTTAAACGTGTTCTC--ATAGAACCTTTTGTAGGCGCTTCTGAGCTG Chrysolophus_amherstiae TGTTTTGCACGTGTTCTCTTATAGAACCTTTTATCGGCTCTTCTGTGCTG Lophophorus_lhuysii TGCTTTACCCGTGCTCTCTTATGGAACCTTTTATCGGCTCTTCTGAGCCG Meleagris_gallopavo TGCTTTACACGTGCTCTCTTATAGAACCTTTTATCGGCTCATCTGAGCTG Phasianus_colchicus TGTTTTGCACGTGTTCTCTTATAGAACCTCTTATCGGCTCTTCTGAGCTG Pucrasia_macrolopha TCCTTCACATGTGCTCTCTTATAGAACCTTTTATCGGCTCTTCTGAGCTG Syrmaticus_reevesii TGCTTTACACGTGTTCTCTTATAGAACCTCTTGTTGGCTCTTCTGAGCTG Tetraophasis_szechenyii TGCTTTACCCGTGCTCTCTTGTAGAACCTTTTATTGGCTCTTCTGAGCTG Tragopan_temminckii TGCTTTACACGTGTTCTCTTATAGAACCTCTTATCGGCTCTTCTGAGCTG Arborophila_ardens TGCTTTAAACGTGCTCTCTTATAGAGCCTTTTATAGGCGCTTCTGAGCTG Arborophila_brunneopectus TGCTTTAAACGTGCTCTCTTATAGAGCCTTTTATAGGCGCTTCTGAGCTG Gallus_gallus TACTTTACATGTGCTCTCTTCTAGAGCCTTTTATAGGCTCTTCTGAGCTG Anas_platyrhynchos TTCTTGCTGAGTGATCTCAATTAGACCCTGTTCTAGGCCCTTCTGCGCGG Arborophila_rufipectus GAAGGGACTC-TGGGCCCTTCTGAGCTGGA---AGGGCACCACTGAGTCC Chrysolophus_amherstiae GAAGGGACTCACAGGCACCACTGAGTCCAACCTCTGGCTTCACACAGTCC Lophophorus_lhuysii GAAGGGGCTCACAGGCACCACTGAGTCCAACCTCTGGCTCCACACAGTCC Meleagris_gallopavo GGAGGGACTCACAGGCACCA---------ACCTCTGGCTCCACACAGTCC Phasianus_colchicus GAAGGGTCTCACTGGCACCACTGAGTCCAACCTCAGGCTCCATGCAGTCC Pucrasia_macrolopha GAAGAGACTCACAGACGCCACTGAGTCCAACCTCTGGCTCCACACAGTCC Syrmaticus_reevesii GAAGGGACTCACAGGCACCACTGAGTCCAACCTCTGGCTCCACGCAGTCC Tetraophasis_szechenyii GAAGGGACTC--AGGCACCACTGAGTCCAACCTCTGGCTCCACACAGTCC Tragopan_temminckii GAAGGGACTCACGGGCACCACCGAGTCCAACCTCTGGTTGCGCACAGTCC Arborophila_ardens GAAGGGACTC-TGGGTGCGTCTGAGCTGGA---AGGGCACCACAGAGTCC Arborophila_brunneopectus GAAGGGACTC-TGGGTGCGTCTGAGCTGGA---AGGGCACCACAGAGTCC Gallus_gallus AATGGGACTCACAGGCACTGCTGAGTCCAACCTCTGGCTCCACACAG--- Anas_platyrhynchos GTTGTGCCTC---------------------------------------- Arborophila_rufipectus TACCT------------------------------------CTGGCTCT- Chrysolophus_amherstiae AACCTGGCCTTGAACACCTCCAGGGATGGACGGGGCATCCACAGCCTCTC Lophophorus_lhuysii AACCTGGCCTTGAACACCTCCAGGGATGGACGGGGCATCCACAGCCTCCC Meleagris_gallopavo AACCCGGCCTTGAACACCTCCAGGGATGGACGGGGCATCCACAGCCTCTC Phasianus_colchicus AACCTGGCCTTGAACACCTTCAGG----GACAGGGCATCCACAGCCTCTC Pucrasia_macrolopha AGCCTGGCCTTGAACACCTCCAGGGATGGACGGGGCATCCACAGCCTCTC Syrmaticus_reevesii AATCTGGCCTTGAACGCCTCCAGGGATGGACAGG-CATCCACAGCCTCTC Tetraophasis_szechenyii AACCTGGCCTTGAACACCTCCAGGGATGG----GGCATCCACAGCCTTCC Tragopan_temminckii AGCCTGGCCTTGAACACCTCCAGGGATAGACGGGGCATCCACAACCTCCC Arborophila_ardens TACCT------------------------------------CTGGCTCC- Arborophila_brunneopectus TACCT------------------------------------CTGGCTCT- Gallus_gallus -----------------------------------------CAGCC---- Anas_platyrhynchos -------------------------------------------------- Arborophila_rufipectus -------------------------------------------------- Chrysolophus_amherstiae TGGGCAGCTGTTCCAGCACCTCACCACTCTCTCTGTAAAGAACTTAGAAC Lophophorus_lhuysii TGGGCAGCTGTTCCAGCACCTCACCAC-CTCACAGTAAAGAACTGAGAAC Meleagris_gallopavo TGGGCAGCTGTTCCAGCACCTCACCACTCTCTCTGTAAAGAACTAAGAAC Phasianus_colchicus TGGGCAGCTGTTTCAGCACCTCACCACTCTCACAGTAAAGAACTTAGAAC Pucrasia_macrolopha TGGGCAGCTGTTC-AGCACCTCACCACTCTCTCTGTAAAGAACTTAGAAC Syrmaticus_reevesii CGGGCAGCTGTTCCAGCACCTCACCACTCTCATAGTAAAGAACTTAGAAC Tetraophasis_szechenyii TGGGCAGCTGTTTCAGCACCTCACCAC-CTCACAGTAAAGAACTTAGAAC Tragopan_temminckii TGGGCAACTGTTCCAGCACCTCACCAC-CTTATAGTAAAGAACTTAGAAG Arborophila_ardens -------------------------------------------------- Arborophila_brunneopectus -------------------------------------------------- Gallus_gallus -------------------------------------------------- Anas_platyrhynchos -------------------------------------------------- Arborophila_rufipectus GCACAGAACCACCCAAAAACCAAACTCTGCATCTGAGCATTGTGAGGGTG Chrysolophus_amherstiae ACACAGAACCACTTAAAAACCAAACTTTGCATCTGAGCATC-TGAG-ATG Lophophorus_lhuysii ACACAGAACCACCTAAAAACCAAACTGTGCGTCTGAGCATTGTGAGGATG Meleagris_gallopavo ACACAGAACCACCTAAGAACCAAACTGTGTGTCTGAGCATTGTGAGGATG Phasianus_colchicus ACAAAGAACCACCTAAAAACCAAACTTTGCATCTGAGCATTGTGAGGATG Pucrasia_macrolopha ACACAGAACCACCTAAAAACCAAACTGTGTGTCTGAGCATTGTGAAGATG Syrmaticus_reevesii ACACAGAACCACCTAAAAACCAAACTTTGCATCTTAGCATC-TGAG-ATG Tetraophasis_szechenyii ACACAGAACCACCTAAAAACCAGACCGTGCGTCTGAGCATTGTGAGGATG Tragopan_temminckii ACGCACAACCACCTAAAAACCAAACTGTGCGTCTGAGCATTGTGAGGATG Arborophila_ardens GCCCAGAACCACCCAAAAACCAAGCTCTGCATCTGAGCATTGTGAGGGTG Arborophila_brunneopectus GCCCAGAACCACCCAAAAACCAAGCTCTGCATCTGAGCATTGTGAGGGTG Gallus_gallus --------------AAAGACTAAAC--TGCATCTGAGCATTGTGAGGATG Anas_platyrhynchos -----------------------------------------------ATG Arborophila_rufipectus CTCCTTTAGTTCCAGCAGCTTGTGGCTACGCCTGCTGCTCTGGGGAGCCT Chrysolophus_amherstiae CTCCTTTAGTTCCAGCAGCTTGTGGCTTTGCCTACTG-----GGGAGCCT Lophophorus_lhuysii CTTCTTTGGTTCCAGCAGCTTCTGGCTGTGCCTGCTGCCCTGGGGAGCCC Meleagris_gallopavo CTCCTTTAGTTCCAGCAGCTTGTGGCTGTGCCTGCTGCCCTGGGGAGCCC Phasianus_colchicus CTCCTTTAGTTCCAGCAGCTTGTGGCTTTGCCTACTG-----GGGAGCCC Pucrasia_macrolopha CTCTTTTAGTTCCAGCAATTTGTGGCTGTGCCTACTGCCATGGGGAGCCT Syrmaticus_reevesii CTCCTTCACTTCCAGCAGCTTGTGGCTTTGCCAACTG-----GGGAGCCT Tetraophasis_szechenyii CTCTTGTAGTTCCAGCAGCGTGTGGCTGTGCCTACTGCCCTGGGGAACCC Tragopan_temminckii CTCCTTTAGTTCCAGCAGCTTGTGGCTGTGCCTACTGCCCAGAGGAGCCC Arborophila_ardens CTCCTTTAGTTCCCGCAGCTTGTGGCTATGCCTGCTGCTATGGGGAGCCT Arborophila_brunneopectus CTCCTTTAGTTCCAGCAGCTTGTGGCTATGCCTGCTGCTATGGGGAGCCT Gallus_gallus CTCCTTTAGTTCCAGCAGCTTGTGGCTGTGCCTACTGCCCTGGGGAGCCT Anas_platyrhynchos CTACTCGAATTCCAGCAGCTCAGTGCTCTGCCCCCT--CATGGGGAACCT Arborophila_rufipectus GTTCCATGCTCACCAACCGCTGGTAAAGAATGTTTTTCTAACCCCCAACT Chrysolophus_amherstiae GTTCCATGCTCGCTGACCTCTGGTGAAGAATGTTTTCCTGACCCCCAACT Lophophorus_lhuysii GTTCCGTGCTCACTGTCCTCTGGTGAAGAATGTTTTCCTAACCCCCAACT Meleagris_gallopavo GTTCCATGCTCACTTACCTCTGGTGAAGAATGTTTTCCTAACCCCCAACT Phasianus_colchicus GTTCCATGCTCACTGACCTCTGGTGAAGAAAGTTTTCCTGACCCCCAACT Pucrasia_macrolopha GTTCCATGCTCACTGATCTCTGGTGAAGAATGTTTTCCTGACCCCCAACT Syrmaticus_reevesii GTTCCATGCTCGCTGACCTCTGGTGAAGAATGTTTTCCTGACCCCCAACT Tetraophasis_szechenyii GTTCCATGCTCACTGTCCTCTGGTGAAGAATGTTTTCCTAACCCCCAACT Tragopan_temminckii GTTCCATGCTCACTGACCTCTGGTGAAGAATGTTTTCCTAACCCCTAACT Arborophila_ardens GTTCCCTGCTCACCAACCTCTGGTGAAGAATGTTTTTCTGACCCCCAACT Arborophila_brunneopectus GTTCCATGCTCACCAACCTCTGGTGAAGAATGTTTTTCTGACCCCCAACT Gallus_gallus GTTCCATGCTCACCAACCTCTGGTGAAGGACATTTTACTAACCCCAAGCT Anas_platyrhynchos ACCCCATGCCCACCACGCTCTGG--GTGCAGATTTTCCTAACCCCGAGCC Arborophila_rufipectus CTGCCCTCCCTCATGGTTTATCTGTGCTGATGCAGATGCTAATCCCTTGT Chrysolophus_amherstiae CTGCCATCCCTCATGGTTCATCTTCGCTGATGCAGATGCTAATCCCTTGT Lophophorus_lhuysii CTGCCCTCCCTCATGGTTCATCTTTGCTGATGCAGATACTAATCCCTTGT Meleagris_gallopavo CTCCTTTCCCTCGTGGTTCATCTTTGCTGATGCAGATGCTAATCCCTTGT Phasianus_colchicus CTGCCCTCCCTCATGGTTCATCTTTGCTGATGCAGATGCTAATCCCTTGT Pucrasia_macrolopha CTACCCTCCCTCATGGTTCATCTTTGCTGATGCAGATGCTAATCCCTTGT Syrmaticus_reevesii CTACCCTCCCTCATGGTTCATCTTCGCTGATGCAGATGCTAATCCCTTGT Tetraophasis_szechenyii CTGCCCTCCCTTATGGTTCATCTTTGCTGATGC------TAATCCCTTGT Tragopan_temminckii CTGCCCTCCCTCATGGTTCATCTTTGCTGATGCAGATGCTAATCCCTTGT Arborophila_ardens CTGCCCTGTCTCATGGTTTATCTGTGCTGATGCAGATGCTAATCCCTTGT Arborophila_brunneopectus CTGCCCTCTCTCATGGTTTATCTGTGCTGATGCAGATGCTAATCCCTTGT Gallus_gallus CTACCCTCCCTCATGGTTCATCTTTGCTGATGCAGATGCTAATCCCTCGT Anas_platyrhynchos CTGCCCGCCCCACTGGTTAAACTGTGCTGATGCAGAT--TAATCCCT--- Arborophila_rufipectus TGCAGGTTGTGCTGGAGCTGATTGAGCTCCGGGAGCTGGGTGCTGCCAGG Chrysolophus_amherstiae TGCAGGTTGTGCTGGAGCTGATTGAGCTCCGGGAGCTGGGTGCTGCCAGG Lophophorus_lhuysii TGCAGGTTGTGCTGGAGCTGATTGAGCTCCGGGAGCTGGGGGCTGCCAGA Meleagris_gallopavo CGTAGGTTGTGCTGGAGCTGATTGAGCTCCGGGAGCTGGGTGCTGCCAGG Phasianus_colchicus TGCAGGTTGTGCTGGAGCTGATTGAGCTCCGGGAGCTGGGTGCTGCCAGG Pucrasia_macrolopha TGCAGGTTGTGCTGGAGCTGATTGAGCTCCGCGAGCTGGGTGCTGCCAGG Syrmaticus_reevesii TGCAGGTTGTGCTGGAGCTGATTGAGCTCCGGGAGCTGGGTGCTGCCAGG Tetraophasis_szechenyii TGCAGGTTGTGCTGGAGCTGATTGAGCTCCGGGAGCTGGGTGCTGCCAGG Tragopan_temminckii TGCAGGTTGTGCTGGAGCTGATTGAGCTCCGGGAGTTGGGTGCTGCCAGG Arborophila_ardens TGCAGGTTGTGCTGGAGCTGATTGAGCTCCGGGAGCTGGGTGCTGCCAGG Arborophila_brunneopectus TGCAGGTTGTGCTGGAGCTGATTGAGCTCCGGGAGCTGGGTGCTGCCAGG Gallus_gallus TGCAGGTTGTGCTGGAGCTAATTGAGCTCCGGGAGCTGGGTGCTGCCAGG Anas_platyrhynchos -GCAGGTCGTGCTGGAGCTTATCGAGCTGCGGGAGCTGGGTGCTGCCCGC Arborophila_rufipectus TCCCTCCTCAGGCAGACAGATCCCATGATCATGCTAAAACAGACCCAGCC Chrysolophus_amherstiae TCCCTCCTCAGGCAGACAGATCCCATGATCATGCTGAAGCAGACTCAGCC Lophophorus_lhuysii TCCCTCCTCAGGCAGACAGATCCCATGATCATGCTGAAGCAGACTCAGCC Meleagris_gallopavo TCCCTCCTCAGGCAAACAGATCCCATGATCATGCTGAAGCAGACTCAGCC Phasianus_colchicus TCCCTCCTCAGGCAGACAGATCCCATGATCATGCTGAAGCAGACTCAGCC Pucrasia_macrolopha TCCCTCCTCAGGCAGACAGATCCCATGATCATGCTGAAGCAGACTCAGCC Syrmaticus_reevesii TCCCTCCTCAGGCAGACAGATCCGATGATCATGCTGAAGCAGACTCAGCC Tetraophasis_szechenyii TCCCTCCTCAGGCAGACAGATCCCATGATCATGCTGAAGCAGACTCAGCC Tragopan_temminckii TCCCTCCTCAGGCAGACAGATCCCATGATCATGCTGAAGCAGACTCAGCC Arborophila_ardens TCCCTCCTCAGGCAGACAGATCCCATGATCATGCTAAAACAGACCCAGCC Arborophila_brunneopectus TCCCTCCTCAGGCAGACAGATCCCATGATCATGCTAAAACAGACCCAGCC Gallus_gallus TCCCTCCTCAGGCAGACAGATCCCATGATCATGCTGAAGCAGACTCAGCC Anas_platyrhynchos TCCCTGCTGAGGCAGACGGATCCCATGATCATGCTGAAGCAGACACAGCC Arborophila_rufipectus AGAGCGGTACATCCACCTCGAAAACCTTCTGGCTAGATCTTACTTTGAGG Chrysolophus_amherstiae AGAGCGGTACATTCACCTTGAAAACCTTCTGGCCAGATCTTACTTTGAGG Lophophorus_lhuysii AGAGCGGTACATTCACCTTGAAAACCTTCTGGCCAGATCTTACTTTGAGG Meleagris_gallopavo AGAGCGGTACATTCACCTTGAAAACCTTCTGGCCAGATCTTACTTTGAGG Phasianus_colchicus AGAGCGGTACATTCACCTTGAAAACCTTCTG-CCAGATCT-ACTGAGAGG Pucrasia_macrolopha AGAGCGGTACATTCACCTTGAAAACCTTCTGGCCAGATCTTACTTTGAGG Syrmaticus_reevesii AGAGCGGTACATTCACCTTGAAAACCTTCTG-CCAGATCT-ACTTAGAGG Tetraophasis_szechenyii AGAGCGGTACATTCACCTTGAAAACCTTCTGGCCAGATCTTACTTTGAGG Tragopan_temminckii AGAGCGGTACATTCACCTTGAAAATCTTCTGGCCAGATCTTATTTTGAGG Arborophila_ardens AGAGCGGTACATCCACCTCGAAAACCTTCTGGCTAGATCTTACTTTGAGG Arborophila_brunneopectus AGAGCGGTACATCCACCTCGAAAACCTTCTGGCTAGATCTTACTTTGAGG Gallus_gallus AGAGCGGTACATCCACCTTGAAAACCTTCTGGCCAGATCTTACTTTAAAG Anas_platyrhynchos AGAGCGGTACATCCACCTGGAAAACCTTCTGGCCAGGTCTTACTTTTATG Arborophila_rufipectus CCATGAAAGCAATGGCCTTGGCAGACTCTGCCTGAGGTTTCTTAAACACA Chrysolophus_amherstiae GCATGAAAGCAAAGGTCTTGGCAGACGCTGCCTGAGGTTTCTTAAATGCA Lophophorus_lhuysii CCATGAAAGCAATGGCCTTGGCAGACTCTGCCTGAGGTTTCTTAAATGCA Meleagris_gallopavo CCATGAAAGCAATGGCCTTGGCAGACTCTGCCTGAGGTTTCTTAAATGCA Phasianus_colchicus CCATGAAAGCAATGGCCTTGGCAGACTCTGCCTGAGGTTTCTTAAATGCA Pucrasia_macrolopha CCATGAAAGCAACGGCCTTGGCAGACTCTGCCTGAGGTTTCTTAAATGCA Syrmaticus_reevesii GCATGAAAGCAAAGGCCTTGGCAGACGCTGCCTGAGGTTTCTTAAATGCA Tetraophasis_szechenyii CCATGAAAGCAATGGCCTTGGCAGACTCTGCCTGAGGTTTCTTAAATGCA Tragopan_temminckii CCATGAAAGCAACGGCCTTGGCAGACTCTGCCTGAGGTTTCTTAAATGCG Arborophila_ardens CCATGAAAGCAATGGCCTTGGCAGACTCTGCCTGAGGTTTCTTAAACACA Arborophila_brunneopectus CCATGAAAGCAATGGCCTTGGCAGACTCTGCCTGAGGTTTCTTAAACACA Gallus_gallus CCATGAAAGCAATGGCCTTGGCAGACTCTGCCTGAGGTTTCTTAAATGCA Anas_platyrhynchos CCATGAAAGCAACAGCCTTGACAGACTCAGCCTGAGGTTTCTTAAATGCA Arborophila_rufipectus TTACAGGATGCAGAAAATAACAAGATTAAGCCTGGGTAAAACGCATAGCC Chrysolophus_amherstiae TTACAGGATGCAGAAAGTAACAAGATTAAACCAGGGTAAAATGCATAGCC Lophophorus_lhuysii TTACAGGATGCAGAAGGTAACAAGATTAAACCAGGGTAAAATGCACAGCC Meleagris_gallopavo TTACAGGATGCAGAAAGTAACAAGATTAAACCAGGGTAAAATGCATAGCC Phasianus_colchicus TTACAGGATGCAGAAAGTAACAAGATTAAACCAGGGTAAAATGCATAGCC Pucrasia_macrolopha TTACAGGATGCAGAAAGTAACAAGATTAAACCAGGGCAAAATGCATAGCC Syrmaticus_reevesii TTACAGGATGCAGAAAGTAACAAGATTAAACCAGGGTAAAATGCATAGCC Tetraophasis_szechenyii TTACAGGATGCAGAAAGTAACAAGATTAAACCAGGGTAAAATGCATAGCC Tragopan_temminckii TTACAGGATGCAGAAAGTAACAAGATTAAACCAGGATAAAATGCATAGCC Arborophila_ardens TTACAGGATGCAGAAAATAACAAGATTAAACCTGGGTAAAATGCATAGCC Arborophila_brunneopectus TTACAGGATGCAGAAAATAACAAGATTAAACCTGGGTAAAATGCATAGCC Gallus_gallus TTACAGGATGCAGAAAGTAACAAGATTAAACCTGGGTAAAATGCATAGCC Anas_platyrhynchos TTATAGGATGTAGAAAGTAACAAGATTAAATCTGGGTAAAATGCATAGCC Arborophila_rufipectus CAGGGACTAAACCAGCATCTGCACTGTTTACTGAGAGCAGGGA------- Chrysolophus_amherstiae CAGGGACTGAACAAGCATCTGCACTGTTTACTGAGAGCAGGGAGCAGGGA Lophophorus_lhuysii CAGGGACTAAACAAGCATCTGCACTGTTTACTGAGAGCAGGGAGCAGGGA Meleagris_gallopavo CAGGGACTAAACAAGCATCTGCACTGTTTACTGAGAGCAGGGAGCAGGGA Phasianus_colchicus CAGGGACTAAACAAGCATCTGCACTGTTTACTGAGAGCAGGGAGCAGGGA Pucrasia_macrolopha CAGGGACTAAACAAGCATCTGCACTGTTTACTGAGAGCAGGGAGCAGGGA Syrmaticus_reevesii CAGGGACTAAACAAGCATCTGCACTGTTTACTGAGAGCAGGGAGCAGGGA Tetraophasis_szechenyii CAGGGACTAAACAAGCATCTGCACTGTTTACTGAGAGCAGGGAGCAGGGA Tragopan_temminckii CAGGGACTAAACAAGCATCTGCACTGTTTACTGAGAGCAGGGAGCAGGGA Arborophila_ardens CAGGGACTAAACCAGCATCTGCACTGTTTACTGAGAGCAGGGA------- Arborophila_brunneopectus CAGGGACTAAACCAGCATCTGCACTGTTTACTGAGAGCAGGGA------- Gallus_gallus CAGGGACTAAACAAGCATCTGCACTGTTTACTGAGAGCAGGGA------- Anas_platyrhynchos CAGGGACCAAACAAGCATCTGCACTGTTTACTGAGAGCAGGGACTGAGAA Arborophila_rufipectus ACACAAAGGCAAAA-GGTGATTCGGTACGATTGAGACTACCTTGTCCCAG Chrysolophus_amherstiae ACATAAAG-TAAAA-GGTGATTCAGTACTATAGAGACTACCTCATCCCAG Lophophorus_lhuysii ACATAAAGGTAAAA-GGTGATTCGGTACTATAGAGACTACCTTGTCCCAG Meleagris_gallopavo ACGTAAAGGTAAAA-GGTGATTCAGTACTATAGAGACTACCTTGTCCCAG Phasianus_colchicus ACGTAAAGGTAAAA-GGTGATTCAGTACTATAGAGACTACCTTGTCCCAG Pucrasia_macrolopha ACATAAAGATAAAAAGGTGATTCGGTACTATAGAGACTACCTTGTCCCAG Syrmaticus_reevesii ACATAAAGGTAGAA-GGTGATTCAGTACTATAGAGACTACCTCATCCCAG Tetraophasis_szechenyii ACATAAAGGTAAAA-GGTGATTTGGTACTATAGAGACTACCTTGTCCCAG Tragopan_temminckii ACATAAAGGTAAAA-GGTGATTTGATACTATAGAGACTACCTTGTCCCAG Arborophila_ardens ACACAAAGGCAAAA-GGTGATTCGGTACGATTGAGACTACCTTGTCCCGG Arborophila_brunneopectus ACACAAAGGCAAAA-GGTGATTCGGTACGATTGAGACTACCTTGTCCCGG Gallus_gallus ACATAAAGGTAAAA-GGTGATTCAGTACTATAGAGACTACCTTGTCCCAG Anas_platyrhynchos ACACAAAGGGAAAA-GGTGATTTGGTACTGTGGAGAC------------- Arborophila_rufipectus AAGTGCAGAACCT----GTCATTTGCTCTTGTTAAATTTCACATGTTTGG Chrysolophus_amherstiae AGGTGCAGAACCT----GTCATTTGCTCTTGTTAAACTTCCTGTGTTTGG Lophophorus_lhuysii AGGTGCAGAACCT----GTCATTTGCTCTTGTTAAACTTCCTGTGTTTGG Meleagris_gallopavo AGGTACAGAACCT----GTCATTTGTTCTCGTTAAACTTCCTGTGTTTGG Phasianus_colchicus AGGTACAGAACCT----GTCATTTGTTCTCGTTAAACTTCCTGTGTTTGG Pucrasia_macrolopha AGGTGCAGAACCTCTGTGTCATTTGTTCTTGTTAAACTTCCTGTGTTTGG Syrmaticus_reevesii GGGTGCAGAACCT----GTCATTTGCTCTTGTTAAACTTCCTGTGTTTGG Tetraophasis_szechenyii AGGTGCAGAACCT----GTCATTCACTCTTGTTAAACTTCCTGTGTTTGG Tragopan_temminckii AGGTGCAGAACCT----GTCATTTGCTCTTGTTAAACTTTCTGTGTTTGG Arborophila_ardens AGGTGCAGAACCT----GTCATTTCCTCTCGTTAAATTTCACATGTTCGG Arborophila_brunneopectus AGGTGCAGAACCT----GTCATTTGCTCTCGTTAAATTTCACATGTGCGG Gallus_gallus AGGTGCAGAACCT----GTCATTTGCTCTTGTTAAACTTCATGTGTCTGA Anas_platyrhynchos AGGTGCAGAATCT----GACACTTGCTCTTGTTCAATTTCATGTGATTGG Arborophila_rufipectus TGACTGACCAGCGAGCTCTCTCTGC-AGGTCCCTCTATCATTGACAGCTC Chrysolophus_amherstiae TGACTGACCAGCAAACTCTGTCTGTAAGGCCCCTCTATCCTTACCAGCTC Lophophorus_lhuysii TGACAGACCAGCAAGCTCCCTCTGCAAGACCCCTCTATCCTTAACAGCTC Meleagris_gallopavo TGACTGATCAGCCAGCTCCCCCTGCAAGGCCCCTCTATCCTTAACAGCTC Phasianus_colchicus TGACTGATCAGCCAGCTCCCCCTGCAAGGCCCCTCTATCCTTAACAGCTC Pucrasia_macrolopha TGACTGATCAGCAAGCTCCCTCTGCAAAACCCCTCTATTCCTAACAGCTC Syrmaticus_reevesii TGACAGACCAGCAAACTCCCTCCGTCAGGCCCCTCTACCCTTAACAGCTC Tetraophasis_szechenyii TGACTGACCAGCAAGCTCCCTCTGCAAGGCCTCTCTATCCTTAACAGCTC Tragopan_temminckii TGACTGACCAGCAAGCTCCCTCTGCAAGGCCCCTCTATCCTTAACAGCTC Arborophila_ardens TGACTGACCAGCGAGCTCTCTCTGC-AGGCCCCT-------TGACAGCTC Arborophila_brunneopectus TGACTGACCAGCGAGCTCTCCCTGC-AGGCCCCT-------TGACAGCTC Gallus_gallus TGACTGACCAGCAACCTCTCTCTGCAAGGCCTCTCTATGCTTAACAGCTC Anas_platyrhynchos TGATTGCGCAGCCCTCTCTCTTTGCAAGGCCTCTCTACCCCTGACAGCTC Arborophila_rufipectus CTAGTTTACTATCATTTGCAAACTCACGTA-GCAAGCATTTAAGTCCCAT Chrysolophus_amherstiae CTAGTTTACTATTGTTTGCAAACTTATGTAGGCAAGCATGCAA------- Lophophorus_lhuysii CCAGTTTACTATCGTTTGCAAACTTATGTAAGCAAGCATGTAA------- Meleagris_gallopavo CTAGTTTAGTATTGTTTGCAAACTTATGTAGGCAAGCATGTAA------- Phasianus_colchicus CTAGTTTAGTATTGTTTGCAAACTTATGTAGGCAAGCATGTAA------- Pucrasia_macrolopha CTACTTTACTATTGTTTGCAAACTTATGTAGGCAGGCATGTAA------- Syrmaticus_reevesii CTAGTTTACTATTGCTTGCAAACTTATGTAGGCAAGCATGTAA------- Tetraophasis_szechenyii CTAGTTTACTATTGTTTGCAAACTTATGTAAGCAAGCATGTAA------- Tragopan_temminckii CTAGTTTACTATCGTTTGCAAACTTATGTAAGCAAGCATGTAA------- Arborophila_ardens CTAGTTTACTATCATTTACAAACTTGCGTA-GCAAGCATTTAAGTCCTGT Arborophila_brunneopectus CTAGTTTACTATCATTTACAAACTTGCGTA-GCAAGCATTTAAGTCCTGT Gallus_gallus CTAGTTTGCAAATGGTAGTAAACTTATTTA-GCAAGCATGAAACTCCTGT Anas_platyrhynchos CTAATTTAGTATCATTTGCAAATTTACTTA-GCATGCATTCAAGTCCTGC Arborophila_rufipectus ATCCAGATCATTTC----AAAAAACATGAAAGAACCCTAACACACA---- Chrysolophus_amherstiae GTTCAGATCATTTATTTAGGAAAACATGAAAGAACCCTGATGCACAGGTC Lophophorus_lhuysii GTCCAGATCATTTA----GGAAAACATGAAAGAACCCTAATGCACAGGT- Meleagris_gallopavo ATTCAGATCATTTA----GGCAAACATGAAAGAACCCTAATGCACAGGTC Phasianus_colchicus ATTCAGATCATTTA----GGCAAACATGAAAGAACCCTAATGCACAGGTC Pucrasia_macrolopha GTTCAGATCATTTA----GGAAGACTTGAAAGAACCCTAATGCACATGTC Syrmaticus_reevesii GTTCAGGTCATTTA----GGAAAACATGAAAGAACCCTAATGCACAGGTC Tetraophasis_szechenyii GTCCAGATCATTTA----GGAAAACATGAAAGAACCCTAATGCACAGGTG Tragopan_temminckii GTCCAGATCATTTA------------GGAAAAAACCCTAATGCACAGGTC Arborophila_ardens ATCCAGATTGTTTC----GAAAAACATGAAAGAGCCCTAACACACA---- Arborophila_brunneopectus ATCCAGATCGTTTC----GAAAAACATGAAAGAACCCTAACACACA---- Gallus_gallus ATCCAGATCATTTA----GAAAAACATGAAAGGACCCTAACGCACAGATC Anas_platyrhynchos ATCCAGATCATTTAT--GAAAACATTAAAGAGAACCCTAAAGCACA---- Arborophila_rufipectus ------GCCCAGCATCCTCTCATAAAGGCTTATTCTCCCTACCTAATCCT Chrysolophus_amherstiae CGCTCAGCCCAGTATCCTCTCACAAAGGCTCATTCTCCCTACCTAATCCT Lophophorus_lhuysii CACTCAGCCCAGTATTCTCTCATAAAGGCTCATTCTCCCTACCTAATCCT Meleagris_gallopavo CACACAACCCAGTATCCTCTCATAAAGGCTCATTCTCCCTACCTAATCCT Phasianus_colchicus CACACAACCCAGTATCCTCTCATAAAGGCTCATTCTCCCTACCTAATCCT Pucrasia_macrolopha CACTCTGCCCAGTATCCTCTCATAAAGGCTCATTCTCCCTACCTAATCCT Syrmaticus_reevesii CACTCAGCCCAGTATCCTCTCACAAAGGCTCATTCTCCCTACCTAATCCT Tetraophasis_szechenyii CACTCAGCCCAGTATTCTCTCATAAAGGCTCATTCTCCCTACCTAATCCT Tragopan_temminckii CACTCAGCCCAGTATCCTCTCATAAAGGCTCATTCTCCCTACCTAATCCT Arborophila_ardens ------GCCCAGCATCCTCTCATAAAGGCTTATTCTCCCTACCTAATCCT Arborophila_brunneopectus ------GCCCAGCATCCTCTCATAAAGGCTTATTCTCCCTACCTAATCCT Gallus_gallus CACTCAGCCCAGCATCCTCTCATAAAGGCCCATTCTCCCTACCTAATCCT Anas_platyrhynchos -----------GCATCCTCTCATGAGGGCTCATTCTCCCTATCTAATACA Arborophila_rufipectus TTGCTTCTGCACTTTCCTGGCTGTATGACACAGCACAGAAAATATCAATA Chrysolophus_amherstiae TTGCTCCTGCGTTTTTCTTGC--------ACAGTACAGAAAATATCAATA Lophophorus_lhuysii TTGCTCCTGCATTTTTCTTGCTGTATGACACAGTACAGAAAATATCAATA Meleagris_gallopavo TTGCTCCTGCATTTTTCTTGCTGTATGACACAGTACAGAAAATATCAATA Phasianus_colchicus TTGCTCCTGCATTTTTCTTGCTGTATGACACAGTACAGAAAATATCAATA Pucrasia_macrolopha TTGCTCCTGCATTTTTCTTGCTGTATGACACAGTACAGAAAATATCAATA Syrmaticus_reevesii TTGCTCCTGCGTTTTTCTTTC--------ACAGTACAGAAAATATCAATA Tetraophasis_szechenyii TTGCTTCTGCATTTTTCTTGCTGTATGACACAGTACAGAAAATATCAATA Tragopan_temminckii TTGCTCCTGCATTTTTCTTGCTGTATGACACAGTACAGAAAATATCAATA Arborophila_ardens TTGCTTCTGCACTTTCCTGGCTGTATGACACAGCACAGAAAATATCAATA Arborophila_brunneopectus TTGCTTCTGCACTTTCCTGGCTGTATCACACAGCACAGAAAATATCAATA Gallus_gallus TTGCTCCTGCATTTTTCTTGCTGTATAACACAGTAAAGAAAATATCAATA Anas_platyrhynchos TCACTTCTGCACTTTTCTTGCTGCGTGATGCAGAACAGAAAATATCAACA Arborophila_rufipectus AACTTCACTTGATGCAACTCTTGGCAGGCACCGCAGACGGTTTCCACTGT Chrysolophus_amherstiae AACTCCACTTAATGCAACCCTTGGCAGACACTGCAGAGATTTTCCACTGT Lophophorus_lhuysii AACTCCACTTGATGCAACCCTTGGCAGACACTGCAGAGATTTCCCACTGT Meleagris_gallopavo AACTCCACTTGATGCAACCCTTGGCAGACACTGCAGAGATTTTCCACTGT Phasianus_colchicus AACTCCACTTGATGCAACCCTTGGCAGACACTGCAGAGATTTTCCACTGT Pucrasia_macrolopha AACTCCACTTGATGCAAACCTTGGCAGACGCTGCAGAGATTTTCCACTGT Syrmaticus_reevesii AACTCCACTTAATGCAACCCTTGGCAGACACTGCAGAGATTTTCCACTGT Tetraophasis_szechenyii AACTTCACTTGATGCAACCCTTGGCAGACACTGCAGAGATTTTCCACTGT Tragopan_temminckii AACTCCACTTGAAGCAACCCTTGGCAGACACTGCAGAGATTTCCCACTGT Arborophila_ardens AACTTCGCTTGATGCAACTCTTGGCAGGCACCGCAGACGGTTTCCACTGT Arborophila_brunneopectus AACTTCACTTGATGCAACTCTTGGCAGGCACCGCAGACGGTTTCCACTGT Gallus_gallus AACTCCACTTGATGCAACCCTTGGCAGACACTGCAGAGATTTTCCACTGT Anas_platyrhynchos AACTCTACTTAATGGAACTCTTGGCCTACACTACAGACATCAGCCTCCAC Arborophila_rufipectus TGGAGGTCACTTTACCAGAACCTGCTGGTTCACGTACCAGCAGCTGCTCT Chrysolophus_amherstiae TGGAGGTCACTTTACCAGAACTTGCTGGTTCATGTACCAGCAGCTGCTCT Lophophorus_lhuysii TGGAGGTCACTTTACCAGAACTTGCTGGTTCATGTACCAGCAGCTGCTCT Meleagris_gallopavo TGGAGGTCACTTTACCAGAACTTGCTGGTTCATGTACCAGCAGCTGCTCT Phasianus_colchicus TGGAGGTCACTTTACCAGAACTTGCTGGTTCATGTACCAGCAGCTGCTCT Pucrasia_macrolopha TGGAGGTCACTTTACCAGAACTTGCTGGTTCATGTACCAGCAGCTGCTCT Syrmaticus_reevesii TGGAGGTCACTTTACCAGAACTTGCTGGTTCATGTACCAGCAGCTGCTCT Tetraophasis_szechenyii TGGAGGTCACTTTACCAGAACTTGCTGGTTCACATACCAGCAGCTGCTCT Tragopan_temminckii TGGAGGTCACTTTACCAGAACTTGCTGGTTCATGTACCAGCAGCTGCTCT Arborophila_ardens TGGAGGTCACTTTACCAGAACCTGCTGGTTCACGTACCAGCAGCTGCTCT Arborophila_brunneopectus TGGAGGTCACTTTACCAGAACCTGCTGGTTCACATACCAGCAGCTGCTCT Gallus_gallus TGGAGGTCACTTTACCAGAACTTGCTAGTTCAAGTACCAGCAGCTGCTCT Anas_platyrhynchos CAGAGGCCAC--AACTAGAGCTCACTGGTTCAGGTACCAGCAGCTGCCCT Arborophila_rufipectus GCTGGGGCTAATATGTCCAGCTTTTCAAGCAGGCTTGCAAGACTATATGA Chrysolophus_amherstiae GCTGGGGCTAATATGTCCAGCTTTTCAATCCGGCTTGCAAGACAGTATGG Lophophorus_lhuysii GCTGGGGCTAATACGTCCAGCTTTTCAAGCAGGCTTGCAAGACTGTATGG Meleagris_gallopavo GCTGGGGCTAATATGTCCAGCTTTTCAGTCAGGCTTGCAAGACTGTATGG Phasianus_colchicus GCTGGGGCTAATATGTCCAGCTTTTCAGTCAGGCTTGCAAGACTGTATGG Pucrasia_macrolopha GCTGGGGCTAATATGTCCAGCTTTTCAATCAGGCTTGCAAGACTGCATGG Syrmaticus_reevesii GCTGGGGCTAATATGTCCAGCTTTTCAATCCGGCTTGCAAGACTGTATGG Tetraophasis_szechenyii GCTGGGGCTAATATGTCCAGCTTTTCAAGCAGGCTTGCAAGACTGTATGC Tragopan_temminckii GCTGGGGCTAATATGTCCAGCTTTTCAAGCAGGCTTGCAAGACTGTATGG Arborophila_ardens GCTGGGGCTAATATGTCCAGCTTTTCAAGCAGGCTTGCAAGACTATATGA Arborophila_brunneopectus GCTGGGGCTAATATGTCCAGCTTTTCAAGCAGGCTTGCAAGACTATATGA Gallus_gallus GCTGGGGCTAATATGTCCAGCTTTTTAAGTGGGCTTGCAAGACCGTATGG Anas_platyrhynchos GCTGAGCCTAAT----TCAGCTTTTCAAGCAGGCTTTGAAGACTGTGTTG Arborophila_rufipectus AGCTTTTGATCACACTGGCTAGACCGTTGTTGGTATCAGAACTAACT-AA Chrysolophus_amherstiae AGCTTTTGATCACACTGGCTAGACTGCTGTTGGTATCAGAACTGACTCAA Lophophorus_lhuysii AGCTTTTGATCACACTGGCTAGACTGCTGTTGGTATCAGAACTGACTTAA Meleagris_gallopavo AGCTTTTGATCACACTGGCTAGACTGCTGTTGGTATCAGAACTGACTTAG Phasianus_colchicus AGCTTTTGATCACACTGGCTAGACTGCTGTTGGTATCAGAACTGACTTAG Pucrasia_macrolopha AGCTTTTGATCACACTGGCTAGACTGCTGTTGGTATCAGAACTGACTTAA Syrmaticus_reevesii AGCTTTTGATCACACTGGCTAGACTGCTGTTGGTATCAGAACTGACTTAA Tetraophasis_szechenyii AGCTTTTGATCGCACTGGCTAGACTGCTGTTGGTATCAGAACTGACTTAA Tragopan_temminckii AGCTTTTGATCGCACTGGCTAGACTGCTGTTGGTATTAGAACTGACTTAA Arborophila_ardens AGCTTTTGATCACACCGGCTAGACCGTTGTTGGTATCAGAACTAACTTAA Arborophila_brunneopectus AGCTTTTGATCACACTGGCTAGACCGTTGTTGGTATCAGAACTAACT-AA Gallus_gallus AGCTTTTCATCACACTGGCTAGACTGCTGTTGATATCAGAATTGACTTAA Anas_platyrhynchos AGCTTTTGATTGCACTGGCCAGACTGCTGCTGGTATCGGAGCTGACTTAA Arborophila_rufipectus CACTAGCTCGGGTATTT Chrysolophus_amherstiae CACTAGCGCGTGTATTT Lophophorus_lhuysii CACTGGCGCATGTATTT Meleagris_gallopavo CACTAGTGCATGCATTT Phasianus_colchicus CACTAGTGCATGCATTT Pucrasia_macrolopha CAGTAGCGCGTGTATTT Syrmaticus_reevesii CACAAGTGCATGTATTT Tetraophasis_szechenyii CACTAGCGCATGTATTT Tragopan_temminckii CACTAGTGTGTGTATTT Arborophila_ardens CACTAGCTCGTGTATTT Arborophila_brunneopectus CACTAGCTCGTGTATTT Gallus_gallus CACTACAGCATGTATTT Anas_platyrhynchos CACCAAAGCTTGGATTT ; END; BEGIN ASSUMPTIONS; TYPESET * UNTITLED = unord: 1 - 12967; END; BEGIN CODONS; CODESET * UNTITLED = universal: 1 - 12967; END; BEGIN MESQUITECHARMODELS; ProbModelSet * UNTITLED = 'Jukes-Cantor': 1 - 12967; END; BEGIN TREES; Title 'Trees from "FULLCR1ALL.con"'; LINK Taxa = Taxa; TRANSLATE [0] 1 Arborophila_rufipectus, [1] 2 Chrysolophus_amherstiae, [2] 3 Lophophorus_lhuysii, [3] 4 Meleagris_gallopavo, [4] 5 Phasianus_colchicus, [5] 6 Pucrasia_macrolopha, [6] 7 Syrmaticus_reevesii, [7] 8 Tetraophasis_szechenyii, [8] 9 Tragopan_temminckii, [9] 10 Arborophila_ardens, [10] 11 Arborophila_brunneopectus, [11] 12 Gallus_gallus, [12] 13 Anas_platyrhynchos; TREE con_all_compat = (13:0.169098,((1:0.013008,(10:0.010298,11:0.005235)1.00:0.012008)1.00:0.060991,(12:0.04943,((9:0.041668,(3:0.021407,8:0.01971)1.00:0.005863)1.00:0.002308,((4:0.030659,6:0.032977)1.00:0.003689,(2:0.01834,(5:0.02172,7:0.018634)1.00:0.003615)1.00:0.015229)1.00:0.002653)1.00:0.016494)0.55:0.003814):0.169098); TREE con_all_compat = (13:0.169098,((1:0.013008,(10:0.010298,11:0.005235):0.012008):0.060991,(12:0.04943,((9:0.041668,(3:0.021407,8:0.01971):0.005863):0.002308,((4:0.030659,6:0.032977):0.003689,(2:0.01834,(5:0.02172,7:0.018634):0.003615):0.015229):0.002653):0.016494):0.003814):0.169098); END; Begin MESQUITE; MESQUITESCRIPTVERSION 2; TITLE AUTO; tell ProjectCoordinator; timeSaved 1453540073215; getEmployee #mesquite.minimal.ManageTaxa.ManageTaxa; tell It; setID 0 6770588511742409505; endTell; getEmployee #mesquite.charMatrices.ManageCharacters.ManageCharacters; tell It; setID 0 4497940030795537316; mqVersion 304; checksumv 0 3 1914445054 null getNumChars 12967 numChars 12967 getNumTaxa 13 numTaxa 13 short true bits 2305843009213693967 states 15 sumSquaresStatesOnly 3501018.0 sumSquares -3.22818021289904E19 longCompressibleToShort false usingShortMatrix true NumFiles 1 NumMatrices 1; mqVersion; endTell; getWindow; tell It; suppress; setResourcesState false false 100; setPopoutState 300; setExplanationSize 0; setAnnotationSize 0; setFontIncAnnot 0; setFontIncExp 0; setSize 1366 650; setLocation -8 0; setFont SanSerif; setFontSize 10; getToolPalette; tell It; endTell; desuppress; endTell; getEmployee #mesquite.minimal.ManageTaxa.ManageTaxa; tell It; showTaxa #6770588511742409505 #mesquite.lists.TaxonList.TaxonList; tell It; setTaxa #6770588511742409505; getWindow; tell It; newAssistant #mesquite.lists.TaxonListCurrPartition.TaxonListCurrPartition; setExplanationSize 30; setAnnotationSize 20; setFontIncAnnot 0; setFontIncExp 0; setSize 1266 578; setLocation -8 0; setFont SanSerif; setFontSize 10; getToolPalette; tell It; setTool mesquite.lists.TaxonList.TaxonListWindow.ibeam; endTell; endTell; showWindow; getEmployee #mesquite.lists.ColorTaxon.ColorTaxon; tell It; setColor Red; removeColor off; endTell; getEmployee #mesquite.lists.TaxonListAnnotPanel.TaxonListAnnotPanel; tell It; togglePanel off; endTell; endTell; endTell; getEmployee #mesquite.trees.BasicTreeWindowCoord.BasicTreeWindowCoord; tell It; makeTreeWindow #6770588511742409505 #mesquite.trees.BasicTreeWindowMaker.BasicTreeWindowMaker; tell It; suppressEPCResponse; setTreeSource #mesquite.trees.StoredTrees.StoredTrees; tell It; setTreeBlock 1; toggleUseWeights off; endTell; setAssignedID 1316.1453296388015.956870974850713695; getTreeWindow; tell It; setExplanationSize 30; setAnnotationSize 20; setFontIncAnnot 0; setFontIncExp 0; setSize 1266 578; setLocation -8 0; setFont SanSerif; setFontSize 10; getToolPalette; tell It; setTool mesquite.trees.BasicTreeWindowMaker.BasicTreeWindow.reroot; endTell; setActive; getTreeDrawCoordinator #mesquite.trees.BasicTreeDrawCoordinator.BasicTreeDrawCoordinator; tell It; suppress; setTreeDrawer #mesquite.trees.SquareLineTree.SquareLineTree; tell It; setNodeLocs #mesquite.trees.NodeLocsStandard.NodeLocsStandard; tell It; branchLengthsToggle off; toggleScale on; toggleBroadScale off; toggleCenter on; toggleEven on; setFixedTaxonDistance 0; endTell; setEdgeWidth 4; showEdgeLines on; orientUp; endTell; setBackground White; setBranchColor Black; showNodeNumbers off; showBranchColors on; labelBranchLengths off; centerBrLenLabels on; showBrLensUnspecified on; showBrLenLabelsOnTerminals on; setBrLenLabelColor 0 0 255; setNumBrLenDecimals 6; desuppress; getEmployee #mesquite.trees.BasicDrawTaxonNames.BasicDrawTaxonNames; tell It; setColor Black; toggleColorPartition off; toggleColorAssigned on; toggleShadePartition off; toggleShowFootnotes on; toggleNodeLabels on; toggleCenterNodeNames off; toggleShowNames on; namesAngle ?; endTell; endTell; setTreeNumber 1; setDrawingSizeMode 0; toggleLegendFloat on; scale 0; toggleTextOnTree off; togglePrintName on; showWindow; endTell; desuppressEPCResponse; getEmployee #mesquite.trees.ColorBranches.ColorBranches; tell It; setColor Red; removeColor off; endTell; getEmployee #mesquite.ornamental.BranchNotes.BranchNotes; tell It; setAlwaysOn off; endTell; getEmployee #mesquite.ornamental.ColorTreeByPartition.ColorTreeByPartition; tell It; colorByPartition off; endTell; getEmployee #mesquite.ornamental.DrawTreeAssocDoubles.DrawTreeAssocDoubles; tell It; setOn on; setDigits 4; writeAsPercentage off; toggleCentred off; toggleHorizontal on; toggleWhiteEdges on; setFontSize 10; setOffset 0 0; endTell; getEmployee #mesquite.ornamental.DrawTreeAssocStrings.DrawTreeAssocStrings; tell It; setOn on; toggleCentred on; toggleHorizontal on; setFontSize 10; setOffset 0 0; endTell; getEmployee #mesquite.trees.TreeInfoValues.TreeInfoValues; tell It; panelOpen false; endTell; endTell; endTell; getEmployee #mesquite.charMatrices.BasicDataWindowCoord.BasicDataWindowCoord; tell It; showDataWindow #4497940030795537316 #mesquite.charMatrices.BasicDataWindowMaker.BasicDataWindowMaker; tell It; getWindow; tell It; setExplanationSize 30; setAnnotationSize 20; setFontIncAnnot 0; setFontIncExp 0; setSize 1266 578; setLocation -8 0; setFont SanSerif; setFontSize 10; getToolPalette; tell It; endTell; setTool mesquite.charMatrices.BasicDataWindowMaker.BasicDataWindow.arrow; colorCells #mesquite.charMatrices.ColorByState.ColorByState; tell It; setStateLimit 9; toggleUniformMaximum on; endTell; colorRowNames #mesquite.charMatrices.TaxonGroupColor.TaxonGroupColor; colorColumnNames #mesquite.charMatrices.CharGroupColor.CharGroupColor; colorText #mesquite.charMatrices.NoColor.NoColor; setBackground White; toggleShowNames on; toggleShowTaxonNames on; toggleTight off; toggleThinRows off; toggleShowChanges off; toggleSeparateLines off; toggleShowStates on; toggleAutoWCharNames off; toggleAutoTaxonNames off; toggleShowDefaultCharNames off; toggleConstrainCW on; toggleBirdsEye off; toggleShowPaleGrid off; toggleShowPaleCellColors off; toggleShowPaleExcluded off; togglePaleInapplicable on; toggleShowBoldCellText off; toggleAllowAutosize off; toggleColorsPanel off; toggleLinkedScrolling on; toggleScrollLinkedTables off; endTell; showWindow; getWindow; tell It; forceAutosize; endTell; getEmployee #mesquite.charMatrices.ColorCells.ColorCells; tell It; setColor Red; removeColor off; endTell; getEmployee #mesquite.categ.StateNamesStrip.StateNamesStrip; tell It; showStrip off; endTell; getEmployee #mesquite.charMatrices.AnnotPanel.AnnotPanel; tell It; togglePanel off; endTell; getEmployee #mesquite.charMatrices.CharReferenceStrip.CharReferenceStrip; tell It; showStrip off; endTell; getEmployee #mesquite.charMatrices.QuickKeySelector.QuickKeySelector; tell It; autotabOff; endTell; getEmployee #mesquite.charMatrices.SelSummaryStrip.SelSummaryStrip; tell It; showStrip off; endTell; getEmployee #mesquite.align.AlignToDropped.AlignToDropped; tell It; gapCosts 8 3 2 2; subCosts 10 5 10 10 10 5 5 10 10 10 5 10; endTell; getEmployee #mesquite.molec.ColorByAA.ColorByAA; tell It; emphasizeDegeneracy off; endTell; getEmployee #mesquite.molec.SequenceInfoEditor.SequenceInfoEditor; tell It; panelOpen false; endTell; endTell; endTell; getEmployee #mesquite.charMatrices.ManageCharacters.ManageCharacters; tell It; showCharacters #4497940030795537316 #mesquite.lists.CharacterList.CharacterList; tell It; setData 0; getWindow; tell It; newAssistant #mesquite.lists.CharListInclusion.CharListInclusion; newAssistant #mesquite.lists.CharListPartition.CharListPartition; newAssistant #mesquite.lists.CharListCodonPos.CharListCodonPos; setExplanationSize 30; setAnnotationSize 20; setFontIncAnnot 0; setFontIncExp 0; setSize 1266 578; setLocation -8 0; setFont SanSerif; setFontSize 10; getToolPalette; tell It; endTell; endTell; showWindow; getEmployee #mesquite.lists.CharListAnnotPanel.CharListAnnotPanel; tell It; togglePanel off; endTell; endTell; endTell; endTell; end;