#NEXUS [written Tue Jan 26 13:20:10 CST 2016 by Mesquite version 3.04 (build 725) at l-PC/192.168.1.198] BEGIN TAXA; TITLE Taxa; DIMENSIONS NTAX=13; TAXLABELS Arborophila_ardens Arborophila_brunneopectus Anas_platyrhynchos Arborophila_rufipectus Chrysolophus_amherstiae Gallus_gallus Lophophorus_lhuysii Meleagris_gallopavo Phasianus_colchicus Pucrasia_macrolopha Syrmaticus_reevesii Tetraophasis_szechenyii Tragopan_temminckii ; END; BEGIN CHARACTERS; TITLE Character_Matrix; DIMENSIONS NCHAR=8836; FORMAT DATATYPE = DNA INTERLEAVE GAP = - MISSING = ?; MATRIX Arborophila_ardens GGAGCAGCAGAAATTATGCCACAGTTGTGTTAACACTATTTTCATCTTTT Arborophila_brunneopectus GGAGCAGCAGAAATTATGCC-CAGTTGTGTTAACACTATTTTCATCTTTT Anas_platyrhynchos TCAGCAACAGCAATTATGCCACCGTTGTGTTAACAACATTTTCATCTTCT Arborophila_rufipectus GGAGCAGCAGAAATTACGCCACAGTTGTGTTAACACTATTTTCATCTTTT Chrysolophus_amherstiae GGAGCAGCAGAAATTATGCCACAGTTGTGTTAACACTATTTTCATCTTTT Gallus_gallus GGAGCAGCAGAAATTATGCCACAGTTGTGTTAACACTATTTTCATCTTTT Lophophorus_lhuysii GGAGCAGCAGAAATTATGCCACAGTTGTGTTAACACTATTTTCATCTTTT Meleagris_gallopavo GGAGCAGCAGAAATTATGCCGCAGTTGTGTTAACACTATTTTCATCTTTT Phasianus_colchicus GGAGCAGCAGAAATTATGCCACAGTTGTGTTAACGCTATTTTCATCTTTT Pucrasia_macrolopha GGAGCAGCAGAAATTATGCCACAGTTGTGTTAACACTATTTTCATCTTTT Syrmaticus_reevesii GGAGCAGCAGAAATTATGCCACAGTTGTGTTAACACTATTTTCATCTTTT Tetraophasis_szechenyii GGAGCAGCAGAAATTATGCCACAGTTGTGTTAACACTATTTTCATCTTTT Tragopan_temminckii GGAGCAGCAGAAATTATGTCACAGTTGTGTTAACACTATTTTCATCTTTT Arborophila_ardens CTTTGATGTTGCCAACTGTTCTCATTACAGTGAGCATCTTCTCACTGGTT Arborophila_brunneopectus CTTTGATGTTGCCAACTGTTCTCATTACAGTGAGCATCTTCTCACTGGTT Anas_platyrhynchos CTTTGATGTTGCCAACTGTTCTCATTTCAGTGAGGATCTTGTCACTGGTG Arborophila_rufipectus CTTTGATGTTGCCAACTGTTCTCATTATAGTGAGCATCTTCTCACTGGTT Chrysolophus_amherstiae CTTTGATGTTGCCAACTGTTCTTCT-ACAGTGAGCATCTCGTCACTGGTA Gallus_gallus CTTTGATGTTGCCAACTGTTGTCATTATAGTGAGCATCTTGTCACTGGGA Lophophorus_lhuysii CTTTGATGTTGCCAACTGTTCTCATTGTAGTGAGCATCTCGTCACTGGTA Meleagris_gallopavo CTTTGATGTTGCCAACTGTTCTCATTATAGTGAGCATCTCATCACTGGTA Phasianus_colchicus CTTTGATGTTGCCAACTGTTCTTCTTATAGTGAGCATCTCGTCACTGGTA Pucrasia_macrolopha CTTTGATGTTGCCAACTGTTCTCATTATAGTGAGCATCTTGTCACTGGTA Syrmaticus_reevesii CTTTGATGTTGCCAACTGTTCTTCTTATAGTGAGCATCTCGTCACTGGTA Tetraophasis_szechenyii CTTTGATGTTGCCAACTGTTCTCACTGTAGTGAGCATCTTGTCACTGGTA Tragopan_temminckii CTTTGATGTTGCCAACTGTTCTCATTATAGTGAGCATCTCGTCACTGGTG Arborophila_ardens TGTGATTTAGTTGAAAGGTATTTTTTGAAATTTTCTGGAAAACAATATAG Arborophila_brunneopectus TGTGATTTAGTTGAAAGGTATTTTTTGAATTTTTCTTGAAAACAATATAG Anas_platyrhynchos TGTGAT-TAGTTGAAACACATTTCCATAAATTTTCTGGAAAATAATGTAG Arborophila_rufipectus TGTGATTTAGTTGAAAGGTATTTTTTGATTTTTTCTTGAAAAGAATATAG Chrysolophus_amherstiae TGTGATATAGTTGAAAGTCATTTTCAGAAATTTTCTGGAAAACAATACAG Gallus_gallus TGTGATTTAGTTGAAAGGCATTTTCAGAAATTTTCTGGAAAA-AGTACAG Lophophorus_lhuysii TGTGATACAGTTGAAAGTCATTTTCGGAAATTTTCTGGAAAACAATACAG Meleagris_gallopavo TGTGAAATAGTTGAAAGTCATTTTCGGAAATTTTCTGGAAAACAGTACAG Phasianus_colchicus TGTGATATAGTTGAAAGTCATTTTCAGAAATTTTCTGGAAAACAATACAG Pucrasia_macrolopha TGTGATGTAGTTCAAAGTCATTTTCGGAAATTTTCTGAAAAACAATACAG Syrmaticus_reevesii TGTGATATAGTTGAAAGTCATTTTCAGAAATTTTCTGGAAAACAATACAG Tetraophasis_szechenyii TGTGATATAGTTGAAAGTCATTTTCGGAAATTTTCTGGAAAACAATACAA Tragopan_temminckii TGTGATATAGTTGAAAGTCACTTTCGGAAATTTTCTGGAAAACAATACAG Arborophila_ardens CACTGAGACAGAATCTACTTTTTGTGTATTTTTCCTCTGTGTTCTTTTGG Arborophila_brunneopectus CACTGAGACAGAATCTACTTTTTGTGTATTTTTCCTCTGTGTTCTTTTGG Anas_platyrhynchos CAGGGTGGTAAAATCTACTTTTTGTGTATTTTTTCTCTTTTGTTTTATGG Arborophila_rufipectus CACTGAGACAGAATCTACTTTTTGTGTATTTTTCCTCTGTGTTCTTTTGG Chrysolophus_amherstiae CACTGAGGTAGAATCTACCTTGTGTGTAATTTTTC--TGTGTTCTTTTGG Gallus_gallus CACTGAGGAAGAATCTACTTTTTCTGTGCTTTTTCTCTGTGTTCTTTTGG Lophophorus_lhuysii CACTGAGGTAGAATCTACTTTTTGTGTAATTGTTCTCTGTGTTCTTTTGG Meleagris_gallopavo CACTGAGGTAGGATCTACTTTTTGTGTAATTTTTCTCTGTATTCTTTTGG Phasianus_colchicus CACTGAGGTAGAATATACTTTTTGTGTAATTTTTCACTGTGTTCTTTTGG Pucrasia_macrolopha CACTGAGATAGAATCTACTTTTTGTGTAATTTTTCTCTGTGTTCTTTTGG Syrmaticus_reevesii CACTGAGGTAGAATCTACTTTTTGTGTAATTTTTCTCTGTGTTCTTTTGG Tetraophasis_szechenyii CACTGAGGTAGAATCTACTTTTTGTGTAATTTTTCTCTGTGTTCTTTTGG Tragopan_temminckii CACTGAGATAGAATCTACTTCTTATGTAATTTTTCTCTGTGTTCTTTTGG Arborophila_ardens AAAGACTAACAATTCACTGGTAACTAGGGGATGAATTTCTTACTTTTCCT Arborophila_brunneopectus AAAGGCTAACAATTCACTGGTAACTAGGGGATGAATTTCTTACTTTTCCT Anas_platyrhynchos AGAGGATAACAATTCATTGGTAACTAGGAGATGAATTTATTATTTTTCTT Arborophila_rufipectus AAAGGCTGATAATTCACTGGTAACTAGGGGATGAATTTCTTATTTTTCCT Chrysolophus_amherstiae AAAGACTGACAATTCACCGGTGACTGGGGGACGAAGTTCTTATTTTTCCC Gallus_gallus AAAGACTGACCATTCA-TGATAACTAGGGGGTGAATTTCTTATTTTTCCT Lophophorus_lhuysii AAGGGCTGACAATTCACTGGTAACTAGGGGATGAAGTTCTTATTTTTCCT Meleagris_gallopavo AAAGGCTGACAATTCACTGTTAATTAGGGGATGAAGTTCTTATTTTTCCT Phasianus_colchicus AAAGGCTGACAATTCACTGGTGACTAGGGGATGAAGTTCTTATTTTTCCT Pucrasia_macrolopha AAAGGCTGACAATTCACTGGTAGCTAGGGGATGAGGTTCTTATTTTTTCT Syrmaticus_reevesii AAAGGCTGACATTTCACTGGTGTCTAGGGGATGAAGTTCTTATTTTTCCT Tetraophasis_szechenyii AAGGGCTGACAATTCACTGGTAACTAGGGGATGAAGTTCTTATTTTTCCT Tragopan_temminckii AAGGGCTGACAGTTCACTGGTAACTAGGGGATGAAGTTCTTATTTTTCCT Arborophila_ardens TTCTATTGTCTCTTTATCTAGAAACGACCTCTTCTCTTACCACACATGAA Arborophila_brunneopectus TTCTATTGTCTCTTAATCTAGAAACGACCTCTTCTCTTACCACACATGAA Anas_platyrhynchos TCTTAATGGCTCTTAACCTAAATACTACCTCTACTACTACCATAAAAGGA Arborophila_rufipectus TTTTATTGTCTCTTAATCTAGAAACGACCTCTTCTCTTACCACACATGAA Chrysolophus_amherstiae TCTTATTGTTTCTTAACATAGAAACTACCTCTTCTCTTACCACACATGGA Gallus_gallus TCTTATTGGCTCTTAACCTAGAAACTACCTCTTCTCTTACCACACATGGA Lophophorus_lhuysii TCTTATTGGCTCTTAACATAGAAACTACATATTCTCTTACCACACATGGA Meleagris_gallopavo TCTTATTGGCTCTTAACATAGAAACTACCTCTTCTCTTACCACACCTGGA Phasianus_colchicus TCATATT-TTTTTTAACATAGAAACTACCTCTTCTCTTACCACACATGGA Pucrasia_macrolopha TCTTATTCGCTCTTAACATAGAAACTACCTCTTCTCTTACCACACATGGA Syrmaticus_reevesii TCTTATTGGCTCTTAACATAGAAACTACCTCTTCTCTTACCACACATGGA Tetraophasis_szechenyii TCTTATTGGCTCTTAACATAGAAACTAGCTATTCTCTTACCACACATGGA Tragopan_temminckii TCTTATTGGCTCTTAACATAGAAACTACCTATTCTCTTACCACACATGGA Arborophila_ardens TTATTTTGAATTACGGAAAAAGACAAATGAGAAGAATTGAACCTGTATTT Arborophila_brunneopectus TTATTATGAATTATGGAAAAAGACAAATGAGAAGAATTGAACCTGTATTT Anas_platyrhynchos AGAGTGGGA-TTACC-AGTAATACTATTAGGACTGGTT-------CCTTT Arborophila_rufipectus TTATTTTGAATTATGGAAAAAGACAAATGAGAAGAATTGAACCTGTATTT Chrysolophus_amherstiae TTATTTTGAATTATGGAAAAAGACAAATGAGAAGAATTTAACCTATATTT Gallus_gallus TTATTTGGAATTATAGAAAAAGACAAATGAGAAGAAGTGAACCTATATTT Lophophorus_lhuysii TTATTTTGAATTATGGAAAAAGACAAATGAGAAGAATTTAACCTGTATTT Meleagris_gallopavo TTATTTTGAATTAGGGAAAAAGACAAAGGAGAAGAATTTAACCTATATTT Phasianus_colchicus TTATTTTGAATTATGGAAAAAGACAAATGAGAAGAATTTAACCTGTATTT Pucrasia_macrolopha TTATTTTGAATTATGGAAAAAGACAAATGAGAAGAATTTAACCTATATTT Syrmaticus_reevesii TTATTTTGAATTATGGAAAAAGACAAATGAGAAGAATTTAACCTATATTT Tetraophasis_szechenyii TTATTTTGAATTATGGGAAAAGACAAATGAGAAGAATTTAACCTGTATTT Tragopan_temminckii TTGTTTTGTATTATGGAAAAAGACAAATGAGAAAAATTTAACCTGTATTT Arborophila_ardens CTTGGGCTTTGATTATATTTCTGATTTGCTTTAATGCAAATATAAAGTTT Arborophila_brunneopectus CTTGGGCTTCGATTATATTTCTGATTTGCTTTAATGCAAATATAAAGTTT Anas_platyrhynchos CTTGGGCTTCGACTGTATTTCTGATTTGCTCCAACGCAAATATACGATTT Arborophila_rufipectus CTTGGGCTTCGATTATATTTCTGATTTGCTTTAATGCAAATATAAAGTTT Chrysolophus_amherstiae CTTGGGCTTCGATTATATTTCTGATTTGCTTTAATGCAAATACAAAATTT Gallus_gallus CTTGGGCTTCGATTATATTTCTGATTTGTTTTAATGCAAATACAAATTTT Lophophorus_lhuysii CTTGGGCTTTGATTATATTTTTGATTTGATTTAATGCAAATACAGAATTT Meleagris_gallopavo CTTGGGCTTCGACTATATTTCTGATTTGCTATAATGCAAATACAAAATTT Phasianus_colchicus CTTAGGCTTCGATTATATTTCTGATTTGCTTTAATGCAAATACAAAATTT Pucrasia_macrolopha CTTGGGCTTTGATTATATTTCTGATTTTCTTTAATGCAAATAAAAAATGT Syrmaticus_reevesii CTTGGGCTTCGATTGTATTTCTGATTTGCTTTAATGCAAATACAAAATTT Tetraophasis_szechenyii CTTGGTCATTGATTATATTTTTTATTTGCTTTAATGCAAATACAGAATTT Tragopan_temminckii CTTGGGCTTCGATTATATTTCTAATTTGCTTTAATGCAAATACAAAATTT Arborophila_ardens TACTTACATCAAGGAGAAAGAGTCTGCGGATTTTAATTTCAAATATTAAA Arborophila_brunneopectus TACTTACATCAAGGAGAAAGAGTCTGCAGATTTTAATTTCAAATATTAAA Anas_platyrhynchos GACTAACATCAAGG--------TCTGCAGACTTTAATTTCAAATATTAAA Arborophila_rufipectus TACTTACATCAAGGAGAAAGAGTCTGCAGATTTTAATTTCAAATATTAAA Chrysolophus_amherstiae TACTTATATCAAAGAG------TCTGCAGATTTTAATTTCAAATATTAAA Gallus_gallus TACTCAAATCAAGGAGAAAGAGTCTGCAGATTTTAATTTCAAATATTAAA Lophophorus_lhuysii TACTTATATCAAAGAGAAAGGGTCTGCAGATTTTAATTTCAAATATTAAA Meleagris_gallopavo TACTTATATCAAAGAGAAAGAGTCTGCAGATTTTAATTTCAAATATTAAA Phasianus_colchicus TACTTATATCAAAGAGAAAGAGTCTGCAGATTTTAATTTCAAATATTAAA Pucrasia_macrolopha TATTTATATCGAAGAGAAAGAGTCTGCAAATTTTAATTTCAAATATTAAA Syrmaticus_reevesii TACACATATCAAAGAGAAAGAGTCTGCAGATTTTAATTTCAAATATTAAA Tetraophasis_szechenyii TACTTATATCAAAGAGAAAGGGTCTGCAGATTTTAATTTCAAATATTAAA Tragopan_temminckii TACTTATATCAAAGAG------TTGGCAGATTTTAATTTCAAATATTAAA Arborophila_ardens ATAACCTTTGAAAACGGTGACCTTAAAAATACACATTTC---------AG Arborophila_brunneopectus ATAACATTTGAAAAAGGTGACCTTAAAAATACACATTTC---------AG Anas_platyrhynchos ATAAATTTGAAAATTAGTGACCTTAAAAATACACATTTCCCTGCTTTCAG Arborophila_rufipectus ATAACATTTGAAAATGGTGACCTTAAAAATACACATTTC---------AG Chrysolophus_amherstiae ATAACCTTTGAAAATGGTGACCTTAAAAATACACATTTCCCCGCTTTCAG Gallus_gallus ATAACCTTTGAAAATTGTGACCTTAAAAATGCACATTTCCCTGCTTTCAG Lophophorus_lhuysii ATAACCTTTGAAAATGGTGACCTTAAAAATACACATTTCCCCGCTTTCAG Meleagris_gallopavo ATAACCTTTGAAAATGGTGACCTTAAAAATACACATTTCCCCGCTTTCAG Phasianus_colchicus ATAACCTTTGAAAATGGTGACCTTAAAAATACACATTTCCCCGCTTTCAG Pucrasia_macrolopha ATAAGCTTTGAAAATGGTGACCTTAAAAATACACATTTCCCCGCTTTCAG Syrmaticus_reevesii ATAACCTTTGAAAATGGTGACCTTAAAAATACACATTTCCCTGCTTTCAG Tetraophasis_szechenyii ATAACCTTTGAAAATGGTGACCTTAAAAATACACATTTCCCCGCTTTCAG Tragopan_temminckii ATAACCTTTGAAAATGGTGACCTTAAAAATACACATTTCCCCGTTTTCAG Arborophila_ardens GAATATTCCAAATAATCCTAAACAGAAGGTACACCATGACAGACAGTCTT Arborophila_brunneopectus GAATATTCCAAATAATCCTAAACAGAAGGTACACCATGACAGACAGTCTT Anas_platyrhynchos GAATTTTCCAGATAATGCTAAGCAGAAGGTATACTACAACATATAGTCTT Arborophila_rufipectus GAATTTTCCAAATAATCCTAAACAGAAGGTACACCATGACAGACAGTCTT Chrysolophus_amherstiae GAATTTTCCAAGTAACCCTAAACAGAAGGTACACCACGACACATAGTCTT Gallus_gallus GAATTTTCCAAATAATCCTAAACAGAAGGTACACCAGGACCCATAGTCTT Lophophorus_lhuysii GAGTTTTCCAAATAATCCTAAACAGAAGGTACACCACGACACATAGTCTT Meleagris_gallopavo GAATTTTCCAAATAATCCTAAACAGAAGGTACACCATGACACATAGTCTT Phasianus_colchicus GAATTTTCCAAATAATCCTAAACAGAAGGTACACCACGACACATAGTCTT Pucrasia_macrolopha GAATTTTCCAAATAATCCTAAACAGAAGGTACACCACGACACATAGTCTT Syrmaticus_reevesii GAATTTTCCAAATAATCCTAAACAGAAGGTACACCACGACACATAGTCTT Tetraophasis_szechenyii GAATTTTCCAAATAATCCTAAACAGAAGGTACACCACGACACATAGTCTT Tragopan_temminckii GAATTTTCCAAATAATCCTAAACAGAAGGTACACCATGACACATAGTCTT Arborophila_ardens GAAGAAAATGGCATCTGACAGCTTCAAAAAAATTATGTAGGAGGGAAAAA Arborophila_brunneopectus GAAGAAAATGGGATCTGACAGCTTCAAAAAAATTATGTAGGAGGAAAAAA Anas_platyrhynchos GAAGAAAATGGCATCTGACAGCTTCAAAAAAATTGTGTAGGAGGAAAAAA Arborophila_rufipectus GAAGAAAATGGCATCTGACAGCTTCAAAAAAATTATGTAGGAGGGAAAAA Chrysolophus_amherstiae GAAGAAAATGGTATCTGACAGCTTCAAAAAAATTATGTAGGAGGAAAAAA Gallus_gallus GAAGAAAATGGTATCTGACAGCTTCAAAAAAATTATGTAGGAGGAAAATA Lophophorus_lhuysii GAAGAAAATGGTATCTGACAGCTTCAAAAAAATTATGTAGGAGGAAAAAA Meleagris_gallopavo GAAGAAAATGGTATCTGACAGCTTCAAAAAAATTATGTAGGAGGAAAAAA Phasianus_colchicus GAAGAAAATGGTATCTGACAGCTTCAAAAAAATTATGTAGGAGGAAAAAA Pucrasia_macrolopha GAAGAAAATGGTATCTGACAGCTTCAAAAAAATTATGTAGGAGGAAAAAA Syrmaticus_reevesii GAAGAAAATGGTATCTGACAGCTTCAAAAAAATTATGTAGGAGGAAAAAA Tetraophasis_szechenyii GAAGAAAATGGTATCTGACAGCTTCAAAAAAATTATGTAGGAGGAAAAAA Tragopan_temminckii GAAGAAAATGGTATCTGACAGCTTCAAAAAAATTATGTAGGAGGAAAAAA Arborophila_ardens TATATCACTTTAATTGTCAAAGCACTGCATGAGAGTGCTCGGTGTCAAGC Arborophila_brunneopectus TATATCACTTTAATTGTCAAAGCACTGCATGAGAGTGCTCGGTGTCACGC Anas_platyrhynchos TATATCATTTTAATTGTCAAAGCACTGCATGAGAGTGCCAAGCGTCGTGC Arborophila_rufipectus TATATCACTTTAATTGTCAAAGCACTGCATGAGAGTGCTCGGTGTCACGC Chrysolophus_amherstiae TATATCATTTTAATTGTCAAAGCACTGCATGAGAGTGCTCGGTGTCACGC Gallus_gallus TATATCATTTTAATTGTCAAAGCACTGCATGAGAGTGCTCGGTGTCACGC Lophophorus_lhuysii TATATCATTTTAATTGTCAAAGCACTGCATGAGAGTGCTCGGTGTCACGC Meleagris_gallopavo TATATCATTTTAATTGTCAAAGCACTGCATGAGAGTGCTCGGTGTCACGC Phasianus_colchicus TATATCATTTTAATTGTCAAAGCATTGCATGAGAG-GCTCGGTGTCACGC Pucrasia_macrolopha TATATCATTTTAATTGTCAAAGCACTGCATGAGAGTGCTCGGTGTCACGC Syrmaticus_reevesii TATATCATTTTAATTGTCAAAGCACTGCATGAGAG-GCTCGGTGTCACGC Tetraophasis_szechenyii TATATCATTTTAATTGTCAAAGCACTGCATGAGAGTGCTCGGTGTCACGC Tragopan_temminckii TATATCATTTTAATTGTCAAAGCACTGCATGAGAGTGCTCGGTGTCACGC Arborophila_ardens ACACGGGTTAAATTAGATGGGGGTGAAA-TACAGGCGGGTTTATCATCAG Arborophila_brunneopectus AGACGG-TTAAATTAGATGGGGGGGAAA-TACAGGCGGGTTTATCATCAG Anas_platyrhynchos AGACTGTTTAA-TTAGACGGGG-TAAAAATACACGCAAGTTTATCACGAA Arborophila_rufipectus AGACGGTTCAAATTAGATGGGGGTGAAAATACAGGCGGGTTTATCACTAG Chrysolophus_amherstiae AAACGGTTTAAATTAGACGGGGGTAAAAATACAGGCGGGTTTATCACGAA Gallus_gallus AGACGGTTTAAATTAGACGGGGGTAAAAACACAGGCGGGTTTATCACGAA Lophophorus_lhuysii AGACGGTTTAAATTAGATGGGGGTAAAAATACAGGCGGGTTTATCACGAA Meleagris_gallopavo AGACGGTTTAAATTAGATGGGGGTAAAAATACAGGCGGGTTTATCACGAA Phasianus_colchicus AGACGGTTTAAATTAGACGGGGGTAAAAATACAGGCGGGTTTATCACGAA Pucrasia_macrolopha AGACGGTTTAAAGTAGATGGGGGTAAAAATACAGGCGGGTTTATCACGAA Syrmaticus_reevesii AGACGGTTTAAATTAGACGGGGGTAAAAATACAGGCGGGTTTATCACGAA Tetraophasis_szechenyii AGACGGTTTAAATTAGACGGGGGTAAAAATACAGGCGGGTTTATCACGAA Tragopan_temminckii AAACGGTTTAAATTAGACGGGGGTAAAAATACAGGCGGGTTTATCACGAA Arborophila_ardens ACACTGCAGCCTTTGGTACAGAGACACTGACCACCTTCCCCAC-TGCTGC Arborophila_brunneopectus ATACTGCAGCCTTTGGTACAGAGACACTGACCGCCTTCCCCAC-TGCTGC Anas_platyrhynchos ACACCGAGACCTTCGCCATGGAGACACCGGCAGCCTTCTCCACGGAGACG Arborophila_rufipectus ACACTGTAGCCTTTGGTACAGAGACACTGACCGCCTTCCCCAC-TGCTGC Chrysolophus_amherstiae ACACCACAGCCTTTGATACAGAGACACCGACCGGTTTCCCCACGCAGCCC Gallus_gallus GCACCACAACCTTTGGTACACA--CACCGACCGCTTTCCCCACGCAGCCT Lophophorus_lhuysii ACACCACAG------ATACAGAGACACCGACCGGTTTCCCCACGCAGCCC Meleagris_gallopavo ACACCACAGCCTTTGATACAGAGACACCGACCGGTCTCCCCACGCAGCCC Phasianus_colchicus ACACCACAGCCTTTGATACAGAGACACCGACCGGTTTCCCCACGCAGCCC Pucrasia_macrolopha ACACCACAACCTTTGATACAGAGACACCGACCGGTTTCCCCACGCAGCCC Syrmaticus_reevesii ACACCACAGCCTTTGATACAGAGACACCGACCGGTTTCCCCACGCAGCCC Tetraophasis_szechenyii ACACCACAGCCTTTGATACAGAGACACCGACCGGTTTCCCCACGCAGCCC Tragopan_temminckii ACACCACAGCCTTTGATACAGAGACACCGACCGGTTTCCCCACGCAGCCC Arborophila_ardens TTGGT----------GATGACGGAGGCACCCAAGGAGCCACAAGCACAAG Arborophila_brunneopectus TTGGT----------GATGACGGAGGCACCCAAGGAGCCACGAGCACAAG Anas_platyrhynchos CGCGCAGCTCCCGGTCACGGCGGAGGCAGCCGGGGCAACGCGAGCACAGG Arborophila_rufipectus TTGGT----------GATGACGGAGGCACCCAAGGAGCCACGAGCACAAG Chrysolophus_amherstiae TCGCTGCCGCTCCGTGCCAGCGGAGGCACCCGAGGAGCCGTGAGCACAGC Gallus_gallus TCGCTGCCGCTCGGTGATGACGGAGGCAGCCAAGGAGCCACGAGCACAGC Lophophorus_lhuysii TCAGT----------GCCAACGGAGGCACCCAGGGAGCCACGAGCACAGC Meleagris_gallopavo TCGCT----------GCCAACGGAGGCACCCAAGGAGCCGTGAGCGCAGC Phasianus_colchicus TCGCTGCCGCTCCGTGCCAACGGAGGCACCCAAGGAGCCGTGAGCACAGC Pucrasia_macrolopha TCGCTGCCGCTCGGTGCCAACGGAGGCACCCAAGGAGCCACGAGCACAGC Syrmaticus_reevesii TCGCTGCCGCTCCGTGCCAACGGAGGCACCCAAGGAGCCGTGAGCACAGC Tetraophasis_szechenyii TCGCTGCCGCTCCGTGCCAACGGAGGCACCCAAGGAGCCGTGAGCACAGC Tragopan_temminckii TCGCTGCCGCTCCGTGCCAGCGGAGGCACCCGAGGAGCCGTGAGCACAGC Arborophila_ardens CAGCAGGAAAGAGCCACCCGGCAGCACCGGCTCTGCTGGGCGCTCAGCAC Arborophila_brunneopectus CAGCAGGGAAGAGCCACCCGGCAGCACCGGCTCTGCTGGGCGCTCAGCAC Anas_platyrhynchos CACCAGGGAAATGCTCCCAGGTATCGTTTACCCGGCCCCGCGCGAAGCGC Arborophila_rufipectus CAGCAGGGAAGAGCCACCCGGCAGCACCGGCTCTGCTGGGCACTCAGCAC Chrysolophus_amherstiae CAGCAGGGAAGGCCCGCCCGGTATCACCGGCTCTGCTGGGCACGAAGCAC Gallus_gallus CAGCAGGGAAGGCCTGCCCGGTACCACCGGCTGTGCCGGGCACGAAGCAC Lophophorus_lhuysii CGCCAGGGAAGGCCCGCCCGGCATCACCGGCTCCGCTGGGCACGAAGCAG Meleagris_gallopavo CGGCAGGGAAGGTCTGCCCGGTACCACCGGCTCTGCTGGGCACGAAGCAC Phasianus_colchicus CAGCAGGGAAGGCCCGCCCGGTATCACCGGCTCTGCTGGGCACGAAGCAC Pucrasia_macrolopha CAGCAGGGAAGGCCCGCCCGGTATCACCGGCTCTGCTGGGCACGAAGCAC Syrmaticus_reevesii CAGCAGGGAAGGCCCGCCCGGTATCACCGGCTCTGCTGGGCACGAAGCAC Tetraophasis_szechenyii CAGCAGGGAAGGCCCGCCCGGTATCACCGGCTCTGCTGGGCACGAAGCAC Tragopan_temminckii CAGCAGGGAAGGCCCGCCCGGTATCACCGGCTCTGCTGGGCACGAAGCAC Arborophila_ardens CAGCGCCTGTCGCTACTTGCTGCGTGACTACCGCCATTACATCTCAGTGC Arborophila_brunneopectus CAGCGCCTGTCGCTACTTGCTGCGTGACTACCGCCATTACATCTCAGTGC Anas_platyrhynchos CAGTACCTGCCCCTACTTGCCGCGGGCCTCCCCGCGTGAAGCCTTCACGG Arborophila_rufipectus CAGCGCCTGTCGCTACTTGCTGCGTGACTACCGCCATTACATCTCAGTGC Chrysolophus_amherstiae -AGTGCCTGTCGCTACTTGCTGTGTGACGACCGCCATTACATCTCCATGC Gallus_gallus GAGTGCCTGTCGCTACTTGCTGCGTGACCGCGGCCATCACATCTCAGTGC Lophophorus_lhuysii CAGTGCCTGTCGCTACTTGCTGCGTGACGACCGCCATTACACCTCCATGC Meleagris_gallopavo CGCTGCCTGTCGCTACTTGCTGCGTGACGGCCGCCATTACACCTCCATGC Phasianus_colchicus CAGTGCCTGTCGCTACTTGCTGTGTGACGACCGCCATTACAGCTCCATGC Pucrasia_macrolopha CAGTGCCTGTCGCTACTTGCTGCGTGACGACCGCCATTACATCTCCATGC Syrmaticus_reevesii CAGTGCCTGTCGCTACTTGCTGTGTGACGACCGCCATTACAGCTCCATGC Tetraophasis_szechenyii CAGTGCCTGTCGCTACTTGCTGTGTGACGACCGCCATTACAGCTCCATGC Tragopan_temminckii -AGTGCCTGTCGCTACTTGCTGTGTGACGACCGCCATTACATCTCCATGC Arborophila_ardens CAGGGAGGAATTTCCACCCGGAACGCAGACGGCCGAGCCTGAAATTCAGG Arborophila_brunneopectus CAGGAAGGAATTTCCACCCGGAACGCAGACGGCCGAGCCTGAAATTCAGG Anas_platyrhynchos CAGGGCAGGGTTGCGGTGCG-AGCGCAGACTGCCGAGCCGGAAATTCAGG Arborophila_rufipectus CAGGGAGGAATTTCTACCCGGAACGCAGACGGCCGAGCCTGAAATTCAGG Chrysolophus_amherstiae CAGGGAGGAATTTCCACCCGGAACGCAGACGGCCGAGCCTGAAATTCAGG Gallus_gallus CAGGCAGGAATTTCCACCCGGAACGCAGACGGCCGAGCCTGAAATTCAGG Lophophorus_lhuysii CAGGGAGGAATTTCCACCCGGAACGCAGACAGCCGAGCCTGAAATTCAGG Meleagris_gallopavo CAGGGAGGAATTTCCACCCGGAACGCAGACGGCCGAGCCTGAAATTCAGG Phasianus_colchicus CAGGGAGGAATTTCCACCCGGAACGCAGACGGCCGAGCCTGAAATTCAGG Pucrasia_macrolopha CAGGGAGGAATTTCCACCCGGAAAGCAGACAGCCGAGCCTGAAATTCAGG Syrmaticus_reevesii CAGGGAGGAATTTCCACCCGGAACGCAGACGGCCGAGCCTGAAATTCAGG Tetraophasis_szechenyii CAGGGAGGAATTTCCACCCGGAACGCAGACGGCCGAGCCTGAAATTCAGG Tragopan_temminckii CAGGGAGGAATTTCCACCCGGAACGCAGACGGCCGAGCCTGAAATTCAGG Arborophila_ardens TAGTGCTACCAGGCGAGGGGAGCAGAAATCTGCTGCTGGTTGGCTCCGTG Arborophila_brunneopectus TAGTGCTACCAGGCGAGGGGAGCAGAAATCTGCTGCTGGTTGGCTCCGTG Anas_platyrhynchos TACTGATGTGGGGCCAGCCTCGCAGAAAGCTGCCACTCGTTAATTTCATG Arborophila_rufipectus TAGTGCTACCAGGCGACGGGAGCAGAAATCTGCTGCTGGTTGGCTCCATG Chrysolophus_amherstiae TACTGCTAGCAGGCCAGGAGAGCAGAAATCTGCTGCTTGTTCGCCCCGTG Gallus_gallus TACTGCTACCAGGTGAGGAGAGCAGAAATCTGCTGCTTGCTCGCCCTGTG Lophophorus_lhuysii TACTGCTAGCAGGCCAGCAGAGCAGAAATCTGCTGCTTGTTCGCCCTGTG Meleagris_gallopavo TACTGCCAGCAGGCCAGGAGAGCAGAAATCTGCTGCTTGTTTGCCCTGTG Phasianus_colchicus TACTGCTAGCAGGCCAGGAGAGCAGAAATCTGCTGCTTGTTTGCCCTGTG Pucrasia_macrolopha TACTGCCAGCAGGCCAGGAGAGCAGAAATCTGCTGCTTGTTCGCTCTGTG Syrmaticus_reevesii TACTGCTAGCAGGCCAGGAGAGCAGAAATCTGCTGCTTGTTTGCCCTGTG Tetraophasis_szechenyii TACTGCTAGCAGGCCAGGAGAGCAGAAATCTGCTGCTTGTTTGCCCTGTG Tragopan_temminckii TACTGCTAGCAGGCCAGGAGAGCAGAAATCTGCTGCTTGTTCGCCCCGTG Arborophila_ardens CAACGCAATTAAGCAGCTCTGGTTGCATGAATCTCCTTTCCATGCAGCAG Arborophila_brunneopectus CAACGCAATTAAGCAGCTCTGGTTGCATGAATCTCCTTTCCATGCAGCAG Anas_platyrhynchos AAACATAATTAAGCAGCTCTGGTCCTGCCAACCGCCTGCCTCTCCTGCAG Arborophila_rufipectus CAATGCAATTAAGCAGCTCTGGTTGCATGAATCTCCTTTCCATGCTGCAG Chrysolophus_amherstiae CAATGCAATTAAGCAGCTCTGGTTGCATGAATCTCCTTTCTGTGCAGCAG Gallus_gallus CAATGCAATTCGGCAGCTCTGGTCGCATGAATCTCCTTTCCGTGCAGCAG Lophophorus_lhuysii CAATGCAATTAAGCAGCTCTGGTTGCATGAATCTCCTTTCTGTGCAGCAG Meleagris_gallopavo CAATGCAATTAAGCAGCTCTGCTTGCACGAATCTCCTTTCTGTGCAGCAG Phasianus_colchicus CAATGCAATTAAGCAGCTCTGGTTGCATGAATCTCCCTTCTGTGCAGCAG Pucrasia_macrolopha CAATGCAATTAAGCAGCTCTGGTTGCATGAATCTCCCTTCCGTGCAGCAG Syrmaticus_reevesii CAATGCAATTAAGCAGCTCTGGTTGCATGAATCTCCCTTCTGTGCAGCAG Tetraophasis_szechenyii CAATGCAATTAAGCAGCTCTGGTTGCATGAATCTCCCTTCTGTGCAGCAG Tragopan_temminckii CAATGCAATTAAGCAGCTCTGGTTGCATGAATCTCCTTTCTGTGCAGCAG Arborophila_ardens GAACTC-CCAGCATGTAACAAGAAGCCTCCAGCTCCCCCAAACAATGCCA Arborophila_brunneopectus GAACTC-CCAGCATGTAACAAGAAGCCTCCAGCTCCCCCAAACAATGCCA Anas_platyrhynchos GAGGAGTTGAGCGAGCCACCACGAGG--CCGGCC-----AAATACCGCCA Arborophila_rufipectus GAACTC-CCAGCATGTAACAAGAAGCCTCCAGCTCCCCCAAACAATGCCA Chrysolophus_amherstiae CAAC----------GTAACAAGAAGTCCCCAGCTCCCCCAAACAACACCA Gallus_gallus CAACTCTCCAGCACATAACAAGAAGTCCCCAGCTCCCCCCAACAAC-CCA Lophophorus_lhuysii CAGATCTCCGGCACGTAACAAGAAGTCCCCAGCTCCCCCAAACAACACCA Meleagris_gallopavo CTACTCTCCAGCACGTAACAAGAGGTCCCCAGCTTCCCCAGACAACACCA Phasianus_colchicus CAACTCTCCAGCACGTAATGAGAAGTCCCCAGCTCCCCCAAACAACACCA Pucrasia_macrolopha GAACTCTCCAGCACGTAACAAGAAGTCCCCAGCTCCCCCACACAACACCA Syrmaticus_reevesii CAACTCTCCAGCACGTAATGAGAAGTCCCCAGCTCCCCCAAACAACACCA Tetraophasis_szechenyii CAACTCTCCAGCACGTAATGAGAAGTCCCCAGCTCCCCCAAACAACACCA Tragopan_temminckii CAAC----------GTAACAAGAAGTCCCCAGCTCCCCCAAACAACACCA Arborophila_ardens TGTGCACAGCGTGGGACACC-AGGCACTGCTTCCCAAAACGGCAGCTGCA Arborophila_brunneopectus TGTGCACAGCGTGGGACAAC-AGGCACTGCTTCCCAACACAGCAGCTGCA Anas_platyrhynchos TTTCCTC----CCGGAGACTCAG-TGCTCTTCCTCCTCCTC--------- Arborophila_rufipectus TGTGCGCAGCATGGGACACC-AGGCACTGCTTCCCAACACGGCAGCTGCA Chrysolophus_amherstiae TGTGCACGGCACAGGACACCCAGGCGCTATTTCCCAACACCACAGCTGAA Gallus_gallus TGTGCACGGCGCAGGACACCCAGGCACTATTCCCCAACACCGCAGCTGAA Lophophorus_lhuysii TGTGCTCGGCACAGGACACCCAGGCACTATTTCCCAACACCACAGCTGAA Meleagris_gallopavo TGTGCACAGCACAGGACACCCAGGCACTATTTCCCAACTGCACAACTGAA Phasianus_colchicus TGTGCACGGCACAGGACACCCAGGCACTATTTCCCAACACCACAGCTGAA Pucrasia_macrolopha CGCGCACGGCACAGGACACCCAGGCACTATTCCCCAACACCGCAGCTGAA Syrmaticus_reevesii TGTGCACAGCACAGGACACCCAGGCACTATTTCCCAACACCACAGCTGAA Tetraophasis_szechenyii TGTGCACAGCACAGGACACCCAGGCACTATTTCCCAACACCACAGCTGAA Tragopan_temminckii TGTGCACGGCACAGGACACCCAGGCGCTATTTCCCAACACCACAGCTGAA Arborophila_ardens AGCCTTTCCTCACCGCCAGCACAGTGAACACACAGGCCCAAACCCAACAG Arborophila_brunneopectus AGCCTTTCCTCACCGCCAGCACAGTGAACACACAGGCCCAAACCCAACAC Anas_platyrhynchos --CTCTTACTCACAGCGAGGATCCGCACCATGGCG--TGAGACCCCAGGA Arborophila_rufipectus AGCCTTTCCTCACCGCCAGCACAGTGAGCACACAGGCCCAAACCCAACAG Chrysolophus_amherstiae AGCCCTTCCTCACTGCCAGCACAGTGACCACACAGGCCCAAACCCAACCA Gallus_gallus AGCCCTCCCTCACTGCCAGTACAGTGAGCACACGGGCCCAAACCCAACCG Lophophorus_lhuysii AGCCCTTCCTCGCTGCCAGCACAGTGACCACGCAGGCCCAAACCCAATCA Meleagris_gallopavo AGTCCTTCCTCACTGCCAGCACAGTGACCACACAGGCCCAAACCCAACCA Phasianus_colchicus AGCCCTTCCTCACTGCCAGCACAGTGACCACACAGGCCTGAACCCAACCA Pucrasia_macrolopha AGCCCTTCCTCTCTGCCAGCACAGTGACCACACAGGCCCAAACCCAACCG Syrmaticus_reevesii AGCCATTCCTCACTGCCAGCACAGTGACCACACAGGCCCAAACCCAACCA Tetraophasis_szechenyii AGCCATTCCTCACTGCCAGCACAGTGACCACACAGGCCCAAACCCAACCA Tragopan_temminckii AGCCCTTCCTCACTGCCAGCACAGTGACCACACAGGCCCAAACCCAACCA Arborophila_ardens AGTCCAGCACAACAGCAGGGGGTCCCCAGGCAGCGCTGCCCTGGAGAACT Arborophila_brunneopectus AGTCCAGCACAACAGCGGGGGGTCCCCGGGGAGCGGTGCCCTGGAGAACT Anas_platyrhynchos AG--CAGCC--ACCCTGCTCCCTCCCCTCG--------CCCGAGCCACCT Arborophila_rufipectus AGTCCAGCACAACAGCAGGGGGTCCCCAGGCAGCACTGCCCTGGAGAACT Chrysolophus_amherstiae AGCCCAGCACAACACCACGGG-TCTCCAGG--------TCCTGGAGGACT Gallus_gallus AACCCA--------CCACGGGGTCCCCAGGCAGTGCTGTCCTGGAGAACT Lophophorus_lhuysii AGCCCAGCACAACAACACAGGATCCCCAGGCAGTGGTGTCCTGGACAACT Meleagris_gallopavo AGCCCAGCACAACACCACGGGATCCCCAGGCAGTGCTGTCCTGGAGAACT Phasianus_colchicus AGCCCAGCACAACACCACGGGGTCTCCAGG--------TCCTGGAAAACT Pucrasia_macrolopha AGCTCAGCACAACACCACGGGGTCCCCAGGCAGTGCTGTCCTGGAGAACT Syrmaticus_reevesii AGCCCAGCACAACACCACGGGGTCCCCAGA--------TCCTGGAGAACT Tetraophasis_szechenyii AGCCCAGCACAACACCACGGGGTCCCCAGA--------TCCTGGAGAACT Tragopan_temminckii AGCCCAGCACAACACCACGGG-TCTCCAGG--------TCCTGGAGGACT Arborophila_ardens TCATTGCAGAACGTTGCCCTCTTTTAATGGGCAAAAAAAGGGGTAAAAGC Arborophila_brunneopectus TCATTGCAGAACGTTGCCCTCTTTTAATGGGCAAAAAAAGGGGGAAAAGC Anas_platyrhynchos TCATTACAGGGCAGGGCTTTCCCCTAACGTCCCAAAAAAAGGGTGAAAA- Arborophila_rufipectus TCATTGCAGAACATTGCCCTCTTTTAATGGGCAAAAAAAGGGGTAAAAGC Chrysolophus_amherstiae TCATTACAGAACATCACCCTCCTTTAATGTTAAAAAAAAGAGGTAAGAAC Gallus_gallus TCATTGCAGAACACTGCCCTCCTTCAATGTTAAAAAAAAGGGGTAAAGAC Lophophorus_lhuysii TCATTGTTGAACACTGCCCTCCTTTAACGTTAAAAAAAAGGGGTGAAAAC Meleagris_gallopavo TCATTACAGAAC-CTGTCCTCTTTTAATGTTAAAAAAAAGGGGTAAAAAC Phasianus_colchicus TCATTACAGAACATCACCCTCCTTTAATGTTAAAAAAAAGGGGTAAAAAC Pucrasia_macrolopha TCATTACAGAACATCGCCCTCCTTTAATGTTAAAAAACAGGGGTAGAAAC Syrmaticus_reevesii TCATTACAGAACATCACCCTCCTTTAATGTTAAAAAAAAGGGGTAAAAAC Tetraophasis_szechenyii TCATTACAGAACATCACCCTCCTTTAATGTTAAAAAAAAGGGGTAAAAAC Tragopan_temminckii TCATTACAGAACATCACCCTCCTTTAATGTTAAAAAAAAGAGGTAAGAAC Arborophila_ardens AATGGAAACGCTTCCAACATCCATCCAAAAGCCAAAACATAGAGACAAAG Arborophila_brunneopectus AATGGTAAAGCTTCCAACATCCATCCAAAAGCCACAACATAGAGACAAAG Anas_platyrhynchos ACTGGTAGTGCTTCAAACATGTGTCCGAAAGCCACAACACCCAGACAAAG Arborophila_rufipectus AATGGTAACGCTTCCAACATCCATCCAAAAGCCACAACATAGAGGCAAAG Chrysolophus_amherstiae AATGGTAACGCTTCCAACGTATGTCCAAAAGCCACAACATAAAGACCAAG Gallus_gallus AATGGTAACGCTTCCAACACTTGTCCAAAAGCCACAACATACAGACAAAG Lophophorus_lhuysii AATGGTAACGCTTCCAACCTATGTCCAAAAGCCACAACATAAAGACCAAG Meleagris_gallopavo AATGGTAACGCTTCCAACGTATGTCCAAAAGCCACAACATAAAGACCAAG Phasianus_colchicus AATGGTAACGCTTCCAACGTACGTCCAAAAGCCACAACATAAAGACCAAG Pucrasia_macrolopha AATGGTAACGCATCCAACGTATGTCCAAAAGCCACAACATAAAGACCAAG Syrmaticus_reevesii AATGGTAACGCTTCCAACGTATGTCCAAAGGCCACAACATAAAGACCAAG Tetraophasis_szechenyii AATGGTAACGCTTCCAACGTATGTCCAAAGGCCACAACATAAAGACCAAG Tragopan_temminckii AATGGTAACGCTTCCAACGTATGTCCAAAAGCCACAACATAAAGACCAAG Arborophila_ardens GTGCTGTTTGAAACATCACCTTCTTGACAAAAAGCAACGTCACTAC---- Arborophila_brunneopectus GTGCTGTTTGAAA-ATCACCTTCTTGACAAAAAGCAACGTCACTAC---- Anas_platyrhynchos GTGCTGTTTGAAACATCACCTTTTTGGCAAAAAGCGATATAATTATGGCT Arborophila_rufipectus GTGCTGTTTGAAACATCACCTTGCTGGCAAAAAGCAACGTAATTACGACC Chrysolophus_amherstiae GTGCTGTTTGAAACATCACCTTGCTGGCAAAAAGCAACGTAATTACGGCC Gallus_gallus GTGCTGTTTGAAACATCACCTTTCTGGCAAAAAGCACTGTGATTACGGCC Lophophorus_lhuysii GTGCTGTTTGAAACATCACCTTGCTGGCAAAAAGCAACGTAATTACGGCC Meleagris_gallopavo GTGCTGTTTGAAACATCACCTTGCTGGCAAAAAGCAACGTAATTACGGCC Phasianus_colchicus GTGCTGTTTGAAACATCACCTTGCTGGCAAAAAGCAACGTAATTACGACC Pucrasia_macrolopha GTGCTGTTTGAAACATCACCTTGCTGGCAAAAAGCAACGTAATTACGGCT Syrmaticus_reevesii GTGCTGTTTGAAACATCACCTTGCTGGCAAAAAGCAACGTAATTACAGCC Tetraophasis_szechenyii GTGCTGTTTGAAACATCACCTTGCTGGCAAAAAGCAACGTAATTACGACC Tragopan_temminckii GTGCTGTTTGAAACATCACCTCACTGGCAAAAAGCAACGTAATTACGGCC Arborophila_ardens --------AACGCAGTTAAAAGCGGAAAAGCCAAAACACGATCACAACTG Arborophila_brunneopectus --------AACGCAGTTAAAAGCGGAAAAGCCAAAACACGATCACAACTG Anas_platyrhynchos GCATCCATAACTTAATTAAAAGGGAAAAAGCTGAAAGACAATCAAAATTG Arborophila_rufipectus GTATCCACAGCGTGGTTAAAAGTGAGAAAACCAAAACACGATCACAGCTG Chrysolophus_amherstiae ATATCCACAACGTGGTTAAAAGTGAGAAAACCAAAACATGATCACAACTG Gallus_gallus GTATCCACAACATGGTTAAAACTGAGAAAGCCAAAACACGATCACAACTG Lophophorus_lhuysii GTATCCACAGCGTGGTTAAAAGTGAGAAAACCAAAACACGATCACAACTG Meleagris_gallopavo GTATCCACAACGTGGTTACAAGTGAGGAAACCAAAACACGATCACAACTG Phasianus_colchicus GTATCCACAGCGTGGTTAAAAGTGAGAAAACCAAAACACGATCACAACTG Pucrasia_macrolopha GTATCCACAACGTGGTTAAAAGTGAGAAAACCAAAACACCATCACAACTG Syrmaticus_reevesii ATATCCACAACGTGGTTAAAAGTGAGAAAACCAAAACACGATCACAACTG Tetraophasis_szechenyii GTATCCACAGCGTGGTTAAAAGTGAGAAAACCAAAACACGATCACAACTG Tragopan_temminckii GTATCCACAACGCGGTTAGAAGTGAGAAAACCAAAACACGATCGCAACTG Arborophila_ardens CAGTGAACGCAGCCATGCGGACAAAAACCTGATTTTATAACGTG------ Arborophila_brunneopectus CAGTGAACGCAGCCATGCGGACAAAAACCTGATTTTATAACGTG------ Anas_platyrhynchos CAGCAATCGTAGCTGTACTAATGAAAATCTTATTTTATAAAGTGGATCTG Arborophila_rufipectus CAGCGAACGCAGCCGTGCGGGCGAAAATCTGCTTTTATAACATGGAGCTG Chrysolophus_amherstiae CAGCAAACGCAGCCGTGCGGGTGAAAATCTGCTTTTATAACGTGGAGCTG Gallus_gallus CAGCGAACGCAGCCGTGTGGGCGAAAATCTGATTTAATAACGTGGAGCTG Lophophorus_lhuysii CAGCGAACGCAGCCGTGCAGGCGAAAATCTGCTTTTATAACGTGGAGCTG Meleagris_gallopavo CAGCGAACGCAGCCGTGCGGGCGAAAATCTGCTTTTATAACGTGAAGCTG Phasianus_colchicus CAGCGAACGCAGCCGTGCGGGCGAAAATCTGCTTTTATAACATGGAGCTG Pucrasia_macrolopha CAGCGAACGCAGCCGTGCGGGCGAAAATCTGCTTTTATAACGTGGAGCTG Syrmaticus_reevesii CAGCAAACGCAGCCGTGCGGGAGAAAATCTGCTTTTATAACGTGGAGCTG Tetraophasis_szechenyii CAGCGAACGCAGCCGTGCGGGCGAAAATCTGCTTTTATAACATGGAGCTG Tragopan_temminckii CAGCGAACGCAGCCGTGCGGGCGAAAATCTGCTTTTATAACGTGGAGCTG Arborophila_ardens AAGGTGTTTGTTAAGACCC-TGTGTTCAGGAACAATTCATGTGGGAGGAC Arborophila_brunneopectus AAGGTGTTTGTTAAGACCCATGTGTTCAGGAACAATTCATGTGGGAGGAC Anas_platyrhynchos AAGGTGTTTGTTAAGACCCATGCGTTCAGGAACAATCTGTGTGGGAGGAC Arborophila_rufipectus AAGGTGTTTGTTAAGACCCATGTGTTCAGGAACAATTCATGTGGGAGGAC Chrysolophus_amherstiae AAGGTGTTTGTTAAGACCCATGCGTTCAGGAACAATTCATGTGGGAGGAC Gallus_gallus AAGGTGTTTGTTAAGACCCATGCATTCAGGAACAATTCATGCGGGAGGAC Lophophorus_lhuysii AAGGTGTTTGTTAAGACCCATGCGTTCAGGAACAATTCATGTGGGAGGAC Meleagris_gallopavo AAGGTGTTTGTTAAGACCCATGTGTTCAGGAACAATTCATGTGGGAGGAG Phasianus_colchicus AAGGTGTTTGTTAAGACCCATGCCTTCAGGAACAATCCATGTGGGAGGAC Pucrasia_macrolopha AAGGTGTTTGTTAAGACCCATGCGTTCAGGAACAATTCATGTGGGAGGAC Syrmaticus_reevesii AAGGTGTTTGTTAAGACCCATGCGTTCAGGAACAATTCATGTGGGAGGAC Tetraophasis_szechenyii AAGGTGTTTGTTAAGACCCATGCGTTCAGGAACAGTTCATGTGGGAGGAC Tragopan_temminckii AAGGTGTTTGTTAAGACCCATTCATTCACAAACAATTTGGGAGGGAGGTA Arborophila_ardens TGTAATGTGCACTATCAGTATATTGCTACGTCCTTTTGAATGCTAGCAAT Arborophila_brunneopectus TGTAATGTGCACTATCAGTATATTGCTACGTCCTTTTGAATGCTAGCAAT Anas_platyrhynchos TGTAATGTGCACCGTCAGTATATGG-------CATTCGAATGCTAGCAAT Arborophila_rufipectus TGTAATGTGCACTATCAGTATATTGCTATGTCCTTTCGAATGCTAGCAAT Chrysolophus_amherstiae TGTAACGTGCACTGTCAGTATATTGTTATGGCCTTCTGAATGCTAGCAAT Gallus_gallus TGTAACGTGCACTATCAGTATATTGCTATGTCCTTTTGAATGCTAGCAAT Lophophorus_lhuysii TGTAACGTGCACTGTCAGTATATTGTTATGTCCTTCTGAATGCTAGCAAT Meleagris_gallopavo TGTAACGTGCACTGTCAATATATTGTTATGTCCTTCTGATTGCTAGCAAT Phasianus_colchicus TGTAACGTGCACTGTCAGTATATTGTTATGTCCTTCTGAATGCTAGCAGT Pucrasia_macrolopha TGTAACGTGCACTGTCAGTATATTGTTATGTCCTTCTGAATGCTAGCAAT Syrmaticus_reevesii TGTAACGTGCACTGTCAGTATATTGTTATGTCCTTCTGAATGCTAGCAAT Tetraophasis_szechenyii TGTAACGTGCACTGTCAGTATATTGTTATGTCCTTCTGAATGCTAGCAAT Tragopan_temminckii AGTAACGTGGTCAGGCAGGATATAGGTCCTTCCTTATGAATGCAAGCAAA Arborophila_ardens GAAATGGATTCTAAAATAACATTAATACGAAAACAAATGCAGAAACATGT Arborophila_brunneopectus GAAATGGATTCTAAAATAACATTAATACGAAAACAAATGCAGAAACATGT Anas_platyrhynchos GAAATAGATACTAAAATAACATTAATATAAAAACAAATGCAGAAACATGT Arborophila_rufipectus GAAATGGATACTAAAATAACATTAATGCAAAAACAAATGCAGAAACATGT Chrysolophus_amherstiae GAAATGGATACTAAAATAACATTAATGCAGA------------AACGTGT Gallus_gallus TAAATGGATACTAAAATAACATTAATACGAAAACAAATGCAGAAATGTGT Lophophorus_lhuysii GAAATGGATACTAAAATAACATTAATACAAAAACAAATGCAGAAATGTGT Meleagris_gallopavo GAAATGGATACTAAAATAACATTAATACGAAAACAAATGCAGAAACGTGT Phasianus_colchicus GAAATGGATACTAAAATAACATTAATGCAGAAACAAATGCAGAAACGT-- Pucrasia_macrolopha GAAATGGATACTAACATAACATTAATCCGAAAACAAATGCAGAAACATAT Syrmaticus_reevesii GAAATGGATACTAAAACAACATTAATGCAGAAACAAATGCAGAAACGTGT Tetraophasis_szechenyii GAAATGGATACTAAAATAACATTAATACAAAAACAAATGCAGAAACGTGT Tragopan_temminckii GAAATGGTT----AAATAACATTCATTAGTAAACAAA--CAAAGGCAGGT Arborophila_ardens TTACGTTTACACTAACGTATCTCTGAGAGACTTTTGCATCGTGTTCATTT Arborophila_brunneopectus TTACGTTTACACT-------------------TTTGCATCGTGTTCATTT Anas_platyrhynchos TTACATTTACACAAACATACCTCTGGGAGCCTCTTGCATCATGCTCATTT Arborophila_rufipectus TTACATTTATACTAACGTATCTCTGAGAGACTTTTGCATCGTGTTCATTT Chrysolophus_amherstiae TTACATTTACACTAACATATTTCTGAGAGAATTTTACATCGTGTTCATTT Gallus_gallus TTACATTTACACTAACATACCTCTGAGAGACTTTTGCATCATGTTCATTT Lophophorus_lhuysii TTACATTTACACTTAGATACCTCTGAGAGAATTTTACATCATGTTCATTT Meleagris_gallopavo TTACATTTACACTAACATACCTCTGAGAGAATTTTACATCATGTTCATTT Phasianus_colchicus TTACATTTACACTAGTATACTTCTGATAGAATTTTACATCATGTTCATTT Pucrasia_macrolopha TTACATTTACACTAACATACTTCTGAGAGAATTTTACATCATGTTCATTT Syrmaticus_reevesii TTACATTTACACTAACATACTTCTGAGAAAATTTTACATCATGTTCAATT Tetraophasis_szechenyii TCACATTTACACTAACCTACCTCTGAGAGAATTTTACATCACGTTCATTT Tragopan_temminckii TTACATTTCCTTTCACATACATGTGAGTGAATGAATCATCCATCTCATTC Arborophila_ardens TTTGAGGTATTTAAAGATATTCTTGCTCCTCCAAAACCAGTTCACAGAAT Arborophila_brunneopectus TTTGAGGTATTTAAAGATATTCTTGCTCCTCCAAAACCAGTTCACAGAAT Anas_platyrhynchos TTGGAGCTATTTAGATAG--CATTGTTCCTCCAAAACCAGTTCATTGAAT Arborophila_rufipectus TTTGAGGTATTTAAAGATATTCTTCCTCCTCCAAAACCAGTTCACAGAAT Chrysolophus_amherstiae TTTGAGATATTTAAATATACTTTTGCCCCTCCAAAACCAGTTCGTAGAAT Gallus_gallus TTTGAGATATTTAAAGATATTTTTGCTCCTCCAAGGCCAGTTCTTGGAAT Lophophorus_lhuysii TTTGAGATATTTAAATATACTTTTGCTCCTCCAAAACCAGTTCATAGAAT Meleagris_gallopavo TTTGAGACATTTAAATATACTTTTGCTTCTCCAAAACCAGTTCATAGAAT Phasianus_colchicus TTTGAGATATTTAAATATACTTTTGCTCCTCCAAAACCAGTTTGTAGAAT Pucrasia_macrolopha TTTTAGATATTTAAATACACTTTTGCTCCTCCAAAACAAGTTCATAGAAT Syrmaticus_reevesii TTTGAGATATTTAAATATACTTTTGCTCCTCCAAAACCAGTTCGTAGAAC Tetraophasis_szechenyii TTTGAGATATTTAAATATACTTTTGCTCCTCCAAAACCAGTTCATAGAAT Tragopan_temminckii ATTGAGAGTGATAAATAAATATTTGTTCGCTCCAAAACAGTTCATAGAAT Arborophila_ardens CACAGAATCATAGAAT-TCTGATAAGCAATTGGAAAAGTTAGGTTGATGC Arborophila_brunneopectus CACAGAATCATAGAATGTCTGATAAGCAATTGGAAAAGTTAGGTTGATGC Anas_platyrhynchos CACAGAATGGTTTGA-GGCTGATATGAAGCTGGAAGAGTTAGGCTGGCAC Arborophila_rufipectus CACAGAATCATAGAATGTCTGATAAGCAATTGGAAAAGTTAGGTTGATGC Chrysolophus_amherstiae CATAGGCTTATAAAACGACTGATAAGAAATTGGGAAAGTTAGGTTGATGC Gallus_gallus CATAGGATCACAGAATGGCTGATAAGAAATTGGAAAAGTTAGGTTGATGC Lophophorus_lhuysii CATAGACTCATAAAATGACTGATAAGAAATTGGGAAAGTTAGGTTGATAC Meleagris_gallopavo CATAGATTCATAAAATGACTGATAAGAAATTGGGAAAGTTAGGTTGATAC Phasianus_colchicus CATAGGCTCATAAAACGACTGATAAGAGATCGGGAAAGTTAGGTTGATGC Pucrasia_macrolopha CATAGACTCATAAAATGACTGATAAGAAATTGGGAAAGTTAGGTTGATGC Syrmaticus_reevesii CATAGGCTCATAAAACGACTGATAAGAAATTGGGAAAGTTAGGTTGATGC Tetraophasis_szechenyii CATAGACTCATAAAATGACTGATAAGAAATTGGGAAAGTTAGGTTGATAC Tragopan_temminckii CATTGACTCATAAAATGGCTGATAAGAAATTGGAAAATTTAGGTTGATGC Arborophila_ardens TTATCTAAAGGAGAGCGTACTTGG-CCCAGGTT-TTCCAGTGAAAGCAGG Arborophila_brunneopectus TTATCTAAAGGAGAGCGTACTTGGGCCCAGGTT-TTCCAGTGGAAGCAGG Anas_platyrhynchos TTATCTAAAGAAGTGTCTATTTGGGCCCAGGTGCTGCCAGTGAAAGCAGA Arborophila_rufipectus TTATCTAAAGGAGAGCGTACTTGGGCCCAGGTT-TTCCAGTGGAAGCAGG Chrysolophus_amherstiae TAA-----AGAAAAGTGTATTTGGGCCCAGGTTCTTCTAGTGAAAGCAGG Gallus_gallus TTATCTAGAGAAGAGTGTACGTGGGCCCAAGTTCTTCCAGTGGAAGCAGG Lophophorus_lhuysii TTGTCTAAAGAAGAGTGTATTTGGGCCCTGGTTCTTCCAGTGAAAGCAGG Meleagris_gallopavo TTATCTAAAGAAGAGTGTATTTGGGCCCAGGTTCTTCCAGTGGAAGCAGG Phasianus_colchicus TAA-----AGAAAAGTGTATTTGGGCCCAGGTTCTTCTAGTGAAAGCAGG Pucrasia_macrolopha TTAT----AGCTGAGTGTATTTGGGCCCAGGTTCTTCCAATGGAAGAAGG Syrmaticus_reevesii TAA-----AGAAAAGTGTATTTGGACCCAGGTTCTTCTAGGGAAAGCAGG Tetraophasis_szechenyii TTATCTAAAGAAGAGTGCATTTGGGCCCAGGTC--TCCAGGAGAAGCAGG Tragopan_temminckii TTATCTAAAGAAGAGTGTACT-GAGCCCAGGTC--TCCAGTGGAAGCAGG Arborophila_ardens TACCTCCTGTGGATTGCATTCTCTGTAGACACAAAGAGTCAGAAGTTCAT Arborophila_brunneopectus TACCTCCTGTGGATTGCATTCTCTGTAGACACAAAGAGTCAGAAGTTCAT Anas_platyrhynchos TGCCTCCTGTGGACTGCACTCTCTGTAGACACAGCAAATTACTAGTCCAT Arborophila_rufipectus TACCTCCTGTGGATTGCATTCTCTGTAGACACAAAGAGTCAGATGTTCAT Chrysolophus_amherstiae TACCTCCTGTGGATTGCATTCTCTGTAGACACAAAGAATCAGAAGTTCAT Gallus_gallus TACCTCTTGTGGATTGCATTCTCTGTAGACACAAAGAATCAGAAGTTCAT Lophophorus_lhuysii TACCTCCTGTGGATTGCATTCTGTGTAGACACAAAGAATCAGAAGTTCAT Meleagris_gallopavo TACCCCCTGTGGATTGCATTCTCTGTAGACACAAAGAATCAGAAGTTCAT Phasianus_colchicus TACCTCCTGTGGATTGCATTCTCTGTAGACACAAAGAATCAGAAGTTCAT Pucrasia_macrolopha TACCTCCTGTGGATTGCATTCTCTGTAGACACAAAGAATAAGAAGTGCAT Syrmaticus_reevesii TATCTCCTGTGGATTGCATTCTCTGTAGACACAAAGAATCAGAAGTTCAT Tetraophasis_szechenyii TACCTCCTGTGGACTGCATTCTCTGTAGACACAAAGAATCAGAAGTTCAT Tragopan_temminckii TACCTCCTGTGGATTGCATTCTCTGTAGACACAAAGAATCAGAAGTTCAT Arborophila_ardens CAGAAATATCTTCCGGTGAAGTATGAAACTCTGCACAGCTTCAGGTGAAC Arborophila_brunneopectus CAGAAATATCTTCCGGTGAAGTATGAAACTCTGCACAGCTTCACGTGAAC Anas_platyrhynchos CAGAAATATCTTCCAATGAAATGTGAAACT--GCACAGCTTCATATCACT Arborophila_rufipectus CAGAAATATCTTCCGGTGAAGTATGAAACTCTGCACAGCTTCACGTGAAC Chrysolophus_amherstiae CAGAAATATCTTCCAATGAAGTATGAAACTCTGCTTCTGTACACATGAAC Gallus_gallus CAGAAATATCTTCCAGCGAAGCATGAAACTCTGCACAGCTTCATACGAAC Lophophorus_lhuysii CAGAAATATCTTCCAATGAAGTATGAAACTCTGCTTCTGTACACATGAAT Meleagris_gallopavo CAGAAATATCTTCCAATGAAGTATGAAACTCTGCTTCTGTACAGATGAAC Phasianus_colchicus CAGAAATATCTTCCAATGAAGTATGAAACTCTGCTTCTGTACACGTGAAC Pucrasia_macrolopha CAGAAATATCTTGCAATGAAGTATGAAACTCTGCTTCTGTACACATGAAC Syrmaticus_reevesii CAGAAATATCTTCCAATGAAGTATGAAACTCTGCTTCTGTACACATGAAC Tetraophasis_szechenyii CAGAAATATCTTCCAGTGAAATATGAAACTCTGCTTCTGTACACATGAAC Tragopan_temminckii CAGAAATATCTTCCAGTGAAGCATGAAACT--GTTTCTGTACACATGAAC Arborophila_ardens CCAGCTGAAGAGTCACAACCTTCCCATACCATCCAGTTCTGAACCCCACC Arborophila_brunneopectus CCAGCTGAAGAGTCACAACCTTCCCATACCATCCAGTTCTGAACCCCACC Anas_platyrhynchos CTAACTGCAGAGTCACATCTTACCCATGCCGTCCAGTTCTGAGCCCGACC Arborophila_rufipectus CCAGCTGAAGAGTCACAACCTTCCTATACCATCCAGTTCTGAACCCCACC Chrysolophus_amherstiae CCAACTGAAGAGTCACAACCTACCCATACCATCCAGTTCTAAACCCCACC Gallus_gallus CCAACTGAAGAATCACAGCTTACCCATACCATCCAGTTCTGAACCCCACC Lophophorus_lhuysii CCAGCTGAAGAGTCACAACCGACCCATACCATCCAGTTCTGAACCCCACC Meleagris_gallopavo CCAGCTGAAGAGTCACAACCTACGCATACCATCCAGTTCTGAACCCCACC Phasianus_colchicus CCAGCTGAAGAGTCACAACCTACCCATAC-ATCCAGTTCTGAACCCCACC Pucrasia_macrolopha CCAGCTGAAGAGTCACAACCTAACCACACCATCCAGTTCTGGACCCCACC Syrmaticus_reevesii CCAACTGAAGAGTCACAACCTACCCATACCATCCAGTTCTGAACCCCACC Tetraophasis_szechenyii TCAGCTGAAGAGTCACAACTGACCCATACCATCCAGTTCTGAACCCCACC Tragopan_temminckii CCAGCTGAAGAGTCACAACCGACCCATACCATCCAGTTCTGAACCCCACC Arborophila_ardens AGGCTCATTTCCACAGACAGAGCTGACTCTTGGCTTGGGAGAGCCTCATG Arborophila_brunneopectus AGGCTCATTTCCACAGACACAGCTGACTCCTGGCTTGGGAGAGCCTCATG Anas_platyrhynchos AGGCTCATTTCCACAGACTCGGCTGAC----GA----------------- Arborophila_rufipectus AGGCTCATTTCCACAGACACAGCTGACTCTTGGCTTGGGAGAGCCTCATG Chrysolophus_amherstiae AGGCTCATTTCCATAGACACAGCTGACTCTTGACTTGGGAGAGCCTCACT Gallus_gallus AGGTTCATTTCCACAGACACAGCTGACTCTTGACTTGGGAGAGCCTCACA Lophophorus_lhuysii AGGCTCATTTCCACAGACACAGCTGACTCTTGACTTGGGAGAGCCTCATG Meleagris_gallopavo AGGGTCATTTCCACAGACACAGCTGACTCTTGACTTGAGAGAGCCTCACG Phasianus_colchicus AGGCTCATTTCCACACACACAGCTGACTTTTGACTTGGGAGAGCCTCACT Pucrasia_macrolopha AGGCTCATTTCCACAGACACAGCTGACTCTTGACTTGGGAGGGCCTCATG Syrmaticus_reevesii AGGCTCATTTCCACAGACACAGCTGACTCTTGACCTGGGAGAGCCTCACT Tetraophasis_szechenyii AGGCTCATTTCCACAGACACAGCTTATTCTTGACTTGGGAGAGCCTCACG Tragopan_temminckii AGGCTCATTTCCACAGACACAGCTGATTCTTGACTTGGGAGAGTCTCATG Arborophila_ardens TGAGCTGTGTGTTGCGCAACTCCAGCACCCAGTGTTGGAAACTGTTTGCT Arborophila_brunneopectus TGAGCTGTGTGTTGCGCAACTCCAGCACCCAGTGTTGGAAACTGTTTGCT Anas_platyrhynchos -------------------------------------------------- Arborophila_rufipectus TGAGCTGTGTGTTGCGCAATTCCAGCACCCAGTGTTGGAAACTGTTTGCT Chrysolophus_amherstiae TGAGCTGTGTGTTGCACAACTCCAACGCGCAGTGTTGAAAAGTGTTTGCT Gallus_gallus TGAGCTGTGCGTTGTGCATCTCCAACGCACAGTGTTGAAAAGTGTTTGCT Lophophorus_lhuysii TGAGCTGTGTGTTGCAGAACTCCAACGCACAGTGTTGAAAAGTGTTTGCT Meleagris_gallopavo TGAGCTGTGTGTTGCACAACTCCAACGCATAGTGTTGAAAAATGTTTGCT Phasianus_colchicus TGAGCTGTGTGTTGCACAACTCCAACGCGCAGTGTTGAAAAGTGTTTGCT Pucrasia_macrolopha TGAGCTGCGTGTTGCACAACTCCAACGCACAGCACTGAAAAGTGTTTGCT Syrmaticus_reevesii TGAGCTGTGTGTTGCACAACTCCAACGCAAAGTGTTGAAAAGTGTTTGCT Tetraophasis_szechenyii TGAGCTGTGTGTTGCACAACTCCAACGCACAGTGTTGAAAAGTGTTTGCT Tragopan_temminckii TGAGCTGTGTGTTGCACAACTCCAACGCACAGTGTTGAAAAGTGATTGCT Arborophila_ardens ATAGAAAAAGCTGGAGCTACATGAATGAGAAAACGATGCCAGCCCACTGT Arborophila_brunneopectus ATAGAAAAAGCTGGAGCTACATGAATGAGAAAACGATGCCAGCCCACTGT Anas_platyrhynchos ---------GCTGGAGCTAAATGAATGAGAACAAGATGCCAGCCCCCTGT Arborophila_rufipectus ATAGAAAAAGCTGGAGCTACATGAATGAGAAAACGATGCCAGCCCACTGT Chrysolophus_amherstiae ACAGAAAAAGCTGGAGCTACATGAATGAGAATACGATGCCAGCCCACTGT Gallus_gallus ATAGAAAAAGCTGGAGCTATATGAATGAGAATACGATGCCAGCCCGCTGT Lophophorus_lhuysii ATAGAAAAAGCTGGAGCTACATGAATGAGAATACGATGCCAGCCCACTGT Meleagris_gallopavo ATAGAAAAAGCTGGAGCTACATGAATGAGAATATGATGCCAGCCCACTGT Phasianus_colchicus ATAGAAAAAGCTGGAGCTACATGAATGAGAATATGATGCCAGCCCACTGT Pucrasia_macrolopha ATAGAAAAAGCTGGAGCTACATGAATGAGAATACGATGCCAGCCCACTGT Syrmaticus_reevesii ACAGAAAAAGCTGGAGCTACATGAATGAGAATACGATGCCAGCCCACTGT Tetraophasis_szechenyii ATAGAAAAAGCTGGAGCTACATGAATGAGAATACGATGCCAGCCCACTGT Tragopan_temminckii ATATAAAAAGCTGGAGCTACATGAATGAGAATATGATGCCAGCCCACTGT Arborophila_ardens GCCTTCTTTCAGTTTTACGCACATATTTTAAGCTACATCCATATCCTCTA Arborophila_brunneopectus GCCTTCTT-CAGTT--ACGCACATATTTTAAGCTACATCCATATCCTCCT Anas_platyrhynchos GCCTTCATTCAGTTAAATACCCATATTTAAAGCTACAAGCATTTCCATCG Arborophila_rufipectus GCCTTCTTTCAGTTTTACGCACATATTTTAAGCTACGTCCATATCCTCCT Chrysolophus_amherstiae GCCTTCTTTCAGTTTTATGCACATATTTTAAGCTACATCCATATCCTCCA Gallus_gallus GCCTTCTTTCAGTTTTACACGCATATTTTAAGCTACATTCATATCCTCCT Lophophorus_lhuysii GCCTTCTTTCAGTTTTATGCACATATTTTAAGCTACATCCATATCCTCCT Meleagris_gallopavo GCCTTCTTTCAGTTTTATGCACATATTTTAAGCTACATCCATATCCTCTT Phasianus_colchicus GCCTTCTTTCAGTTTTATGCACATATTTTAAGCTACATCCATATCCTCCA Pucrasia_macrolopha GCCTTCTTTCAGTTTTATGCACATATTT-AAGCTACATCCATATCCTCTT Syrmaticus_reevesii GCCTTCTTTCAGTTTTATGCACATATTTTAAGCTACATCCATATCCTCCA Tetraophasis_szechenyii GCCTTCTTTCAGTTTTATGCACATATTTTAAGCTACATCCATATCCCTTT Tragopan_temminckii GCCTTCTTTCAGTTTTATGCACATATTT-AAGCTACATCCAT-TCCTCCA Arborophila_ardens TTAACTCAGGACATTCTATGACTCTATGACCCTGTTTGTGCTGCTGCCTG Arborophila_brunneopectus TTAACTCAGGACATTCTATGACTCTATGACCCTGTTTGTGCTGCTGCCTG Anas_platyrhynchos CTAACTCGGGATATTTTATGATTCTATGACCCCATTTGTGCTGCCGCGTG Arborophila_rufipectus ATAACTCAGGACATTCTATGACTCTATGACCCTGTTTGTGCTGCTACCTG Chrysolophus_amherstiae TTAACTTAGGACGTTCTATGATTCTATGACCCTGTTTGTGCTGCTACCTG Gallus_gallus ATAACTCAGGACATTCT--GATTCTATGACCCTGTTTGTGTTGCTACCTG Lophophorus_lhuysii TTAAGTCAGGATGTTCTATGATTCTATGACCCTGTTTGTGCTGCTACCTG Meleagris_gallopavo ATAAGTCAGGATGTTCTGTGATTATATGACCCTGTTTGTGCTGCTACCTG Phasianus_colchicus ATAACTTAGGACGTTCTATGACTCTATAACCCTGTTTGTGCTGCTACCTG Pucrasia_macrolopha ATAACTCAGGACGTTCTATGATTCTATGACCCTGTTTGTGCTGCTACCTG Syrmaticus_reevesii TTAACTCAGGACGTTCTATGATTCTGTGACCCTGTTTGTGCTGCTCCCTG Tetraophasis_szechenyii TTAAGTCAGGACGTTCTATGATTCTATGACCCTGTTTGTGCTCCTACCTG Tragopan_temminckii TTAAGTCAGGATGTTCTATGATTCTATGACCCTGTTTGTGCTGCTACCTG Arborophila_ardens TGACTAGTTTGCCTGGGGAGCCTCAGGAAGAGAGAGAAGTCCCGCATTCC Arborophila_brunneopectus TGACTAGTTTGCCTGGGGAGCCTCAGGAAGAGAGAGAAGTCCCGCATTCC Anas_platyrhynchos TGACTGGCTTACCTGGTGAGACTCAGGGAGGGAGGCAACTCCCTTATTCT Arborophila_rufipectus TGACTAGTTTGCCTGGGGAGCCTCAGGAAGAGAGAGAAGTCCCGCATTCC Chrysolophus_amherstiae TG-CTAGCTTGCCTTGGGAGCCTCAGGAAGAGAGAGAACTCCCATATTCT Gallus_gallus TGACTAGCTTGCCTGGGGAGCCTCAGGAAGAGAGAGAGCTCCTGTATTCT Lophophorus_lhuysii TGACTAGCTTGCCTGGGGAGCCTCAGGAAGAGAGAGAACTCCCATATTCT Meleagris_gallopavo TGACTAGCTTGCCTTGGGAGCCTCAGGAAGAGAGAGAACTCCCATATTCT Phasianus_colchicus TGACTAGCTTGCCTTGGGAGCCTCAGGAAGAGAGAGAACTCCCATATTCT Pucrasia_macrolopha TGACTAGCTTGCCTTGGGAGCCTTGGGAAGAGAGAAAACTCCCATATTCT Syrmaticus_reevesii TG-CTAGCTTGCCTTGGGAGCCTCAGGAAGAGAGAGAACTCCCATATTCT Tetraophasis_szechenyii TGACTAGCTTGCCTTGGGAGCCTCAGGAAGAGAGAGAACTCCCATATTCT Tragopan_temminckii TGACTAGCTTGCCTTGAGAGCCTCAGGAAGAGAGAGAACTCCTATATTCT Arborophila_ardens CTTAGCAGAAGGCATATATGCCATCTTCTTGGTCA-CACTAGCATCAAGG Arborophila_brunneopectus CTTAGCAGAAGGCATATATGCCATCTTCTTGGTCA-CACTAGCATCAAGG Anas_platyrhynchos CTTACCAGAATGCATATAAGCCATCTCCTTGGTCAGTGTTAGGATCAAGA Arborophila_rufipectus CTTAGCAGAAGGCGTATATGCCATCTTCTTGGTCA-CACTAGCATCAAGG Chrysolophus_amherstiae CTTATCAGAATGCATATATGCCATCTTCTTGGTCAGTATTAGCATCAGGG Gallus_gallus CTTACCAGAATGCATATATGCCATCTTCTTGGTCAGTACTAGCATCAAGG Lophophorus_lhuysii CTTATTAGAATGTATATATGCCATCTTCTTGGTCAATACTAGCATCAAGG Meleagris_gallopavo CTTATCAGAATGCACATATGCCATCTTCTTGGTCAATACTAGTGTCAAGG Phasianus_colchicus CTTATCAGAATGCRTATATGCCATCTTCTTGGTCAGTACTAGCGTCAAGG Pucrasia_macrolopha CTTATCAGAATGCATCTTCTTGGTC---------AGTGCTGGCGTCAAGG Syrmaticus_reevesii CTTATCAGAATGCATATATGCCATCTTCTTGGTCAATACTAGC-TCAAGG Tetraophasis_szechenyii CTTATTAGAATGCATATATGCCATCTTCTTAGTCAATACTAGCATCAAGG Tragopan_temminckii CTTATTAGAATGCATATATGCCATC---------------------AAGG Arborophila_ardens AGAGCACATGTGTGGTTCAGGGCTGGAGAACTACCAGGTAAGTGATGTGC Arborophila_brunneopectus AGAGCACATGTGTGGTTCAGGGCTGGAGAACTACCAGGTAAGTGATGTGC Anas_platyrhynchos GGAGTGTGTTTGTGGTTCAGGGCTGAAAGACTAGCAGGTAAGTGATGTGC Arborophila_rufipectus AGAGCACATGTGTGGTTCAGGGCTGGAGAACTACCAGGTAAGTGATGTGC Chrysolophus_amherstiae AGAGCACATTTGTGATTCAGGGCTGGAGATCTAGCAGGTAAGTGATGTGC Gallus_gallus AGGGCACATTTGTGATTCAGGGCTGGAGAACTAGCAGGTAAGTGATGTGC Lophophorus_lhuysii AGAGCACGTTTATGATTCAGGGCTGGAGAACTAGCAGGTAAGTGATGTGC Meleagris_gallopavo AGAGCACGTTTATGATTCAGGACTGGAGAACTAGCAGGTAAATGATGTGC Phasianus_colchicus AGAGCACGTTTGTGATTCAGGGCTGGAGATCTAGCAGGTAAGCGATGTGC Pucrasia_macrolopha AGAGCATGTTTATGATTCGGGTCTGGAGAACTAGCAGGTAAGTGATGTGC Syrmaticus_reevesii AGAGCACGTTTGTGATTCAGGGCTGGAGATCTAGCAGGTCAGTGATGTGC Tetraophasis_szechenyii AAAGCACGTTTATGATTTAGGGCTGGAGAACTAGCAGGTAAGTGATGTGC Tragopan_temminckii AGAGCACGTTTGTGATTCAGAGCTGGAGAACTAGCAGGTAAGTGATGTGC Arborophila_ardens TTGGCTGGAGCTCAGGTAACACAGAATGACCTTAGAAGTTTCATATATCC Arborophila_brunneopectus TTGGCTGGAGCTCAGGTAACACAGAATGACCTTAGAAGTTTCATATATCC Anas_platyrhynchos TTGGCTAGGGCTCACCCAGCACACCGAGGCCTCAGGAGTTTTGGATATCC Arborophila_rufipectus TTGTCTGGAGCTCAGGTAACACAGAATGGCCTTAGAAGTTTCATATATCC Chrysolophus_amherstiae TTGGCTGGAGCTCAGGTAGCACAGAATGGCCTTAGAAGTTTCATATATCC Gallus_gallus TCGGCTGGAGCTCAGGTAGCACAGAATGGCCTTAGAAGTTTCATATATGC Lophophorus_lhuysii TCGGCTGGAGCTCAGGTAGCACAGGATGGCCTTCGAAGTTTCATATATTC Meleagris_gallopavo TCGGCTGGAGCTCAGGTAGCACAGAATG-CCTTAGAAGTTTCATAT---- Phasianus_colchicus GCGGCTGGAGCTCAGGTAGCACAGAATGGCCTTAGAAGTTTCATATATCC Pucrasia_macrolopha TCGGCTGGGGCTCAGGTAACACAGAATGGCCTTAGAAGTTTCATATATCC Syrmaticus_reevesii TCGGCCGGAGCTCAGGTAGCACAGAATGGCCTTAGAAGTTTCATATATCC Tetraophasis_szechenyii TCGGCTGGAGCTCAGGTAGCACAGAATGGCCTTAGAAGTTTCATATATCC Tragopan_temminckii TCGGCTGGAGCTCAGGTAGCACAGAATGGCCTTAGAAGTTTCATATATCC Arborophila_ardens AAAGATTCTGCTTCTAAGCGTTGTTGCTTTTAAGTCTGCTGTAGCTCTAT Arborophila_brunneopectus AAAGATTCTGCTTCTAAGCGTTGTTGCTTTTAAGTCTGCTGTAGCTCTAT Anas_platyrhynchos AAAGGTTC------------------------------------------ Arborophila_rufipectus AAAGATTCTGCTTCTAAGCGTTGTTGCTTTTAAGTCTGCTGTAGCTCTAT Chrysolophus_amherstiae AAAGGCTCTTCTTCTAAGCATTGTTGCTT-TAAGACTGCTGTAACTCTGT Gallus_gallus AAAGGCTCTGCTTCTAAGCACTGTTGCTTCTAAGCCTGCTGTAACTCCGT Lophophorus_lhuysii AAAGGCTGTGCTTCTAAGCATTGTTGCTTCTAAGTCTGCTGTAACTCCGT Meleagris_gallopavo AAAGGCTCTGCTTCTAAGCATTGTTGCTTCTAAGTCTTCTGTGGCTCCGT Phasianus_colchicus AAAGGCTCTGCTTCTAAGCATTGTTGTTC-TTAGTCTGCTGTAACTCTGT Pucrasia_macrolopha AAAGGCTCTGCTTCTAAGCACTGTTGCTTCTAAGTCTGCTGTAACTCCAT Syrmaticus_reevesii AAAGGCTCTGCTTCTAAGCACTGTTGCTT-TAAGTCTGCTGTAACTCCGT Tetraophasis_szechenyii AAAGGTTCTGCTTCTAAGCACTGTTGCTTCTAAGTCTGCTGTAACTCCGT Tragopan_temminckii AAAGGCTCTGCTTCTAAGCATTGTTGCTTCTAAGTCTGCTGTAACTCTGT Arborophila_ardens GGCTCTTAAAAGGTGAGGAGAAAGAAATCAACCTTCTGTAGCTGGTCTGT Arborophila_brunneopectus GGCTCTTAAAAGGTGAGGAGAAAGAAATCAACCTTCTGTAGCTGGTCTGT Anas_platyrhynchos -----------------------------AACACTCTTTAGCTTGACTGT Arborophila_rufipectus GGCTCTTAAAAGGTGAGGAGAAAGAAATCAACCTTCTGTAGCTGGTCTGT Chrysolophus_amherstiae GGCTCTGAAGAGGTGAGAAGAAAAAA-TCAACCTTCTGTAACTGGCCTGT Gallus_gallus GGCTTTGGAAAGGCAAGGATAAAAAAACCAACCGTCTATAGCTGGTCTGT Lophophorus_lhuysii GGCTCTGAAAAGGTGAGAAGAAAAAAATCAACCTTCTGTAGCTGGCCTGT Meleagris_gallopavo GGCTCCGAAAAGGTGAGAAGAAAAAAATCAACCTTCTGTAGCTGGCCTGT Phasianus_colchicus GGCTCTGGAGAGGTGAAAA-GAAAAAATCAACCTTCTGTAACTGGCCTGT Pucrasia_macrolopha GGCTCTGAAAAGGTGAGAAGAAAAAAATGAACGTTCTGTAGCTGGCCTGT Syrmaticus_reevesii GGCTCTGAAGAGGTGAGAA-GAAAAAATCAACCTTCTGTAAGTGGCCTGT Tetraophasis_szechenyii GGCTCTGAAAAGGTGAGAA-GAAAAAATCAACCTTCTGTAGCTAGCCTGT Tragopan_temminckii GGCTCTGAAAAGGTGAGAAGAAAAAAATCAACTTTCTGTAGCTGGCCTGT Arborophila_ardens GTCACCCAACCAGACAGATACTGTCAGCTCAACACATTGTCACCAAAATT Arborophila_brunneopectus GTCACCCAACCAGACAGATACTGTCAGCTCAACACATTGTCACCAAAATT Anas_platyrhynchos GATAACCAACCAGAGACATTCAATCAGCTCAACACATTCTCACCAAGAGT Arborophila_rufipectus GTCACCCAACCAGACAAATACTGTCAGCTCAACACATTATCACCAAAATT Chrysolophus_amherstiae GCGACCCAACCAGATAAATCCCATCAGCTCAACACACTATCACCAAAATT Gallus_gallus GGGACCCAACCAGATAAATCCCATCAGCTCAACACATTATCACCAACACT Lophophorus_lhuysii GCGACCCGACCAGATAAGTCCCGTCAGCTCAACACATTATCACCAAAATT Meleagris_gallopavo GCAACCCAACCAGATAAATCCCGCCAGCTCAACACATTATCACCAAAATT Phasianus_colchicus GCAACCCAACCAGATAAATCCCGTCAGCTCAACACATTATCACCAAAATT Pucrasia_macrolopha GTGATCCAACCAGATAAATCCCGTCAGCTCAACACATTATCACCAAAATT Syrmaticus_reevesii GCGGCCCAACCAGATAAATCCCGTCAGCTCAACACATTATCACCAAAATT Tetraophasis_szechenyii GTGACCCAACCAGATAAATCCTGTCAGCTCAACACATTATCACCAAAATT Tragopan_temminckii GTGACCCAACCAGATAAATCCCGTCAGCTCAACACATTATCACCAAAATT Arborophila_ardens GAAGAGGTTGAGATTGATACTAGAGACCAGAGGCTTCTGACTTACCAGAA Arborophila_brunneopectus GAAGAGGTTGAGATTGATACTAGAGACCAGAGGCTTCTGACTTACCAGAA Anas_platyrhynchos GAAGAGGGTGTGATTCCTACGAGAGACTAGCAACGTACAATTTAACAGAA Arborophila_rufipectus GAAGAGGTTGAGATTAATACTAGAGACCAGAGGCTTCTGACTTACCAGAA Chrysolophus_amherstiae GAAGAGGTTAAGATTAATACCAGAGACCAGAGGCTTCTGACTTACCAGAA Gallus_gallus GAAGAGGTTGAGATTAATACTAGAGACCAGAGGCTTCTGACTTACCAGAA Lophophorus_lhuysii GAAGAGGTTGAGATTAATACTAGAGACCAGAGGCTCGAC--TTATCAGAA Meleagris_gallopavo GAAGAGGTTGAGATTAATACTAGAGACCAGAGGCTTCTGACTTACCAGAA Phasianus_colchicus GAAGAGGCTGAGATTAATACCAGAGACCAGAGGCTTCTGACTTACCAGAA Pucrasia_macrolopha GAAGAGGTTGGGATTAGTAGTGGAGACCAGAGGCTTCTGACTTACCAGAA Syrmaticus_reevesii GAAGAGGTTGAGATTAATACCAGAGACCAGAGGCTTCTGACTTACCAGAA Tetraophasis_szechenyii AAAGAGGTTGAGATTAATACTAG-----AGAGGCTTCTGACTTACCAGAA Tragopan_temminckii GAAGAGGTTGAGATTAATACTAGAGACAAGAGGCTCGACACTTACCAGAA Arborophila_ardens TGCAGCCACTACTGCAGATTCTTTTAACAGTTACATTGGACAGTTTCATA Arborophila_brunneopectus TGCAGCCACTACTGCAGATTCTTTTAACAGTTACATTGGATAGTTTCATA Anas_platyrhynchos TGCCCCCACGGAGGCATATCTTATTAAACGGT-TTTTGGACCGATCCCAA Arborophila_rufipectus TGCAGCCACCACTGCAGATTCTTTTAACAGTTACATTGGACAGTTTCATA Chrysolophus_amherstiae TGCATCCACCTTTGCAGATTCTTTTAACAGTTGTGTTGGGTAGTTC-ATA Gallus_gallus TGCAACCACTACTGCAGATTCTTTTAACAGTTGAGTTGGACAGTTCCATA Lophophorus_lhuysii TGCAGCCACTACTGCCAATTTTTTTAACAGCTATGT-GGACGGTTCCATA Meleagris_gallopavo TGCAGCCACCTCTGCAGATTCTTTTAACGGTTGTGTTGGACAGTTCCGCA Phasianus_colchicus TGCAGCCACCTTTGCAGATTCTTTTAACAGTTGTGTTGGATAGTTCCATA Pucrasia_macrolopha TGCAGCCACACTAGCAGATTCTTTTAACGGTTGTGTGTGGAAGTTCCGTA Syrmaticus_reevesii TGCAGCCACCTTTGCAGATTCTTTTAACAG-TGTGTTGGATAGTTC-ATA Tetraophasis_szechenyii TGCAGCCACTACTGCCAGATCTTTTAATAGCTGTTTTGGACAGTTCCGTA Tragopan_temminckii TGCGGCCACTACTGCTCAATCTTTTAACAGCTGTGT-GGACAGTTCCATA Arborophila_ardens AGGAGTCAAGTAACTGCTTAAGGACAGGAAAAAGTAAAGGAATGTAATGC Arborophila_brunneopectus AGGAGTCAAGTAACTGCTTAAGGACAGGAAAAAGTAAAGGAATGTAATGC Anas_platyrhynchos AAGAATCAAGCAATTGTGTAAGCACAG-AACAATTATAGAAATTTAATGC Arborophila_rufipectus AGGAGTCAAGTAACTGCTTAAGGACAGGAAAAAGTAAAGGAATGTAATGC Chrysolophus_amherstiae AGGACTCAAGTAC------------AGGAAAAAGTAAAGAAATTTAGTGC Gallus_gallus AGGACTCAAGTAATTGTTTAAGGACAGGAAAAAGTAAAGAAATTTAATGC Lophophorus_lhuysii AGGACTCAAGTAATTGTTTAAGGACAGGAAAAAGTAAAGAAATTTAATGC Meleagris_gallopavo AGGATGCAAATAATTGTTTAAGGACTGGAAAAAGTAAAGAAATTTAATGC Phasianus_colchicus AGGACTCAAGTAATTGTTTA-----AGGACAGGAAAAAGTAATTTAATGC Pucrasia_macrolopha AGGATTCAAGTAATTGTTTAAG-AGGGGAAAAAGTAAAGAAATTTAATGC Syrmaticus_reevesii AGGACTCAAGTAATTGTTTAAGGACAAGAAAAAGTAAAGAAATTTAATGC Tetraophasis_szechenyii AGGACTCAAGTAATTGTTTAAGGACAGAAAGAAGTAAAGAAATTTAATGC Tragopan_temminckii ACGACTCAAGTAATTGTTTAAGGACAGGAAAAAGTAAAGAAATTTAATGC Arborophila_ardens AGTGGCTATAATCTGCAATCTCTTTTCCTGTTTCTCACAATACAGTATTT Arborophila_brunneopectus AGTGGCTATAATCTGCAATCTCTTTTCCTGTTTCTCACAATACAGTATTT Anas_platyrhynchos ACTGAATATAGCCTGCAATCTATTGTCCTGATTCTTATACTACCGTATTT Arborophila_rufipectus AGTGGCTATAATCTGCAATCTCTTTTCCTGTTTCTTACAATACAGTATTT Chrysolophus_amherstiae AATGGATATAGACTCCAATCTTTTTTCCTGGTTCTTACAGTACAGTATTT Gallus_gallus AATGTATATAGACTGCAATCTTTTTTCCTGTTTCTTAGAGTACACTATTT Lophophorus_lhuysii AGTGGATATAGGCTGCAATCTTTTTTCCTGCTTCTTACAGTACAGTATTT Meleagris_gallopavo AATGGATATAGACTGCAATCTTTTCCCCTGTTTCTTAAAGTACAGTATTT Phasianus_colchicus AATGGATATAGACTGCAATCTTTTTTCCTGGTTCTTACAGTACAGTATTT Pucrasia_macrolopha AATGGATATAGACTGCAATCTTTTTTCCTGTTTCTTACAGTACAGTATTT Syrmaticus_reevesii AATGGATATAGACTGCAATCTTTTTTCCTGGTTCTTACGATACAGTATTT Tetraophasis_szechenyii AATGGATATAGACTGCAATCTTTTTTCCTGTTTCTTACAGTACAGTATTT Tragopan_temminckii AATGGATACAGACTGCAATCTTTTTTCCTGTTTCTTACAGTATGGTATTT Arborophila_ardens TTAACTTTATGCTACCTTCCTTCTTTCTCTAGAAAATATACACTAAAATG Arborophila_brunneopectus TTAACTTTATGCTACCTTCCTTCTTTCTCTAGAAAATATACACTAAAATG Anas_platyrhynchos TGAACTTTGTGGTACCTTCCTTCTGT----AGAAAATATACACCGAAATA Arborophila_rufipectus TTAACTTTACGCTACCTTCCTTCTTTCTCTAGAAAATATACACTAAAATG Chrysolophus_amherstiae TTAACTTTATGCTACCTTCCTCCTTTCTCTAGAAAATATAAACTGAAACA Gallus_gallus TTAACTTTATGCTACCTTCCTCCTTTGTCTAGAAAATATACACTGAAACA Lophophorus_lhuysii TTAACTTTATGCTACCTTCCTCCTTTCTCTAGAAAATATACACTGAAACA Meleagris_gallopavo TTAACTTTATGCTACCTTCCTCCTTTCTCTAGAAAATATACACTGAAACA Phasianus_colchicus TTAACTTTATGCTACCTTCCTCCTTTCTCTAGAAAACATAAACTGAAACA Pucrasia_macrolopha TTAACTTTATGCT----TCCTCCTTTCTCTAGAAAATATACCCTGAAACA Syrmaticus_reevesii TTAACTTTATGCTACCTTCCTCCTTTCTCTAGAAAATATAAACTGAAACA Tetraophasis_szechenyii TCAACTTTATGCTACCTTCCTCCTTTCTCTAGAAAATATACACTGAAACA Tragopan_temminckii TTAACTTTATGCTACCTTCCTCCTTTCTCTAGAAAATATACACTGAAAAA Arborophila_ardens CAAGTGAATATATGTACTTTGGTTTTGTTCTGAAACACTACTACTTGCAA Arborophila_brunneopectus CAAGTGAATATATGTACTTTGGTTTTGTTCTGAAACACTACTACTTGCAA Anas_platyrhynchos CAAGTGGATGCATATACTTTATTTTTGTTCTGAAATGGTTCTTCTCACAG Arborophila_rufipectus CAAGTGAATATATGTACTTTGGTTTTGTTCTGAAACACTACTACTTGCAA Chrysolophus_amherstiae CAAGTGAATATATGTACTTTGGTTTTGTTCTGAAACACTACCTCTTGCAA Gallus_gallus CAAGTGAATATATGTATTTTGGTTTTGTTCCGAAACACTACTTCTTGCAA Lophophorus_lhuysii CAAGTGAATATATGTACTTTGGTTTTGTTCTGAAACGCTACTTCTTGCAA Meleagris_gallopavo CAAGTGAATATATGTACTTTGGTTTTGTTCTGAAACACTACTTCTTCCAA Phasianus_colchicus CGAGTGAATATATGTACTTTGGTTTTGTTCTGAAACACTACCTCTTGCAA Pucrasia_macrolopha CAAGTGAATATATATACTTTGGTTTTGTTCTGAAACACTACTTCATGCAA Syrmaticus_reevesii CAAGTGAATATATGTACTTTGTTTTTGT------ACACTACCTCTTGCAA Tetraophasis_szechenyii CAAGTGAATATATGTACTTTGGTTTTGTTCTGAAACACTACTTCTTGCAA Tragopan_temminckii CAAGTGAATATATGTACTTTGGTTTTGTTCTGAAACACTACTTCTTGCAA Arborophila_ardens AAGAAAGGAAGCCTTGAGAGTATTTCAGACTGTCTTTTATAGTTCCTGAG Arborophila_brunneopectus AAGAAAGGAAGCCTTGAGAGTATTTCAGACTGTCTTTTATAGTTCCTGAG Anas_platyrhynchos AAGAAAGGAAGCCTCGAGAGTATTTCACAGTGTCTTTTATAGTTCCTGAA Arborophila_rufipectus AAGAAAGGAAGCCTTGAGAGTATTTCAGACTGTCT------GTTCCTGAG Chrysolophus_amherstiae AAGAAAGGAAGCCTTGAGAGCATTTCAAACTGTCTTTTATAATTCCTGAG Gallus_gallus AGGAAAGGAAGCCTTGAGAGTATTTCAGATTGTCTTTTATAGTTACTGAG Lophophorus_lhuysii AAGAAAGGAAGCCTTGAGAGTATTTCAGACTGTCTTTTATAGTTCCTGAG Meleagris_gallopavo AAGAAAGGAAGCCTTGAGAGTATTTCAGACTGTATTTTGTAGTTCCTGAG Phasianus_colchicus AAGAAAGGAAGCTTTGAGAGTATTTCAAACTGTCTTTTATAGTTCCTGAG Pucrasia_macrolopha AAGAAAGGAAGCCTTGAGAGTATTTGAGACTGTCTTTTATAGTTCCTGAG Syrmaticus_reevesii AAGAAAGGAAGCCTTGAGAGTATTTCAAACTGTCTTATATAGTTCCTGAG Tetraophasis_szechenyii AAGAAAGGAAGCCTTGAGAGTATTTCAGACTGTCTTTTATAGTTCCTGAG Tragopan_temminckii AAGAAAGGAAGCCTTGAGAGTATTTCAGACTGTCTTTTATAGTTCCTGAG Arborophila_ardens GCTATAACTAAAGTATGTGTTTTCAGTGCAAATGAGGGGACACAAATATT Arborophila_brunneopectus GCTATAACTAAAGTATGTGTTTTCAGTGCAAATGAGGGGACACAAATATT Anas_platyrhynchos GCTACAACTAGAACATGTGTTTTCAACGTACATCAAGGGACATAACTATT Arborophila_rufipectus GCTATAACTAAAATATGTGTTTTCAGTGCAAATGAGGGTACATAAATATT Chrysolophus_amherstiae GGTGTAACTAAAGCGTGTTTTATGCATACAAATCAAGGGACATAAATATT Gallus_gallus GCTATAACTAAAACATGTTTTATGCATGCAAATCAAGGAACATAAATATT Lophophorus_lhuysii ACTATAACTAAAACGTGTTTTATGCATGCAAATCAAGGGACATAAATAT- Meleagris_gallopavo GCTATAACTAAAATGTGTTTTACACATGCAAATCAAGGGACATAAATATT Phasianus_colchicus GCTGTAACTAAAACATGTTTTATGCATGCAAATCAAGGGACATAAATATT Pucrasia_macrolopha GCTATAACTAAAATGTGTTTTATACATGCAAATCAAGGGACATAAATATT Syrmaticus_reevesii GCTGTAACTAAAACATGTTTTATGCATGCAAATCAAGGGACATAAATATT Tetraophasis_szechenyii GCTATAACTAAAGTGTGTTTTATGCACGCAAATCAAGGGACATAAATATT Tragopan_temminckii GCTATAAGTAAAATGTGTTTTATGCATGCAAATCAAGGGACATAAATATT Arborophila_ardens TACAAATTTTGTACATAGAAAATATTTTACCAAAACCAGTGGAGCTCTTG Arborophila_brunneopectus TACAAATTT-GTACATAGAAAATATTTTACCAAAACCAGTGGAGCTCTTG Anas_platyrhynchos TACATATTTTGCTCATAAAAGATTTTTTA-CAAAAGCAGTGGAG---TCA Arborophila_rufipectus TACAAATTTTGTACATAGAAAATATTTTACCAAAACCAGTGGAGTTCTTG Chrysolophus_amherstiae TACAAATTTTGTGCATAGAAGATATTTTATCAAAACTGGTGGAGTTCTCA Gallus_gallus TACAAATTTTGTGCATAGAAGATATTTTACCAAAACCAGTGGAGTTATTG Lophophorus_lhuysii CACAAATTT-GTGCATAGAAGATATTTTATCAAAACTGGTGGAGTTCTCG Meleagris_gallopavo TACAAATTTTGTGCACAGAAGATATTTTATCAAAACTGGCGGAGTTCTCG Phasianus_colchicus TACAAATTTTGTGCATAGAAGATATTTTATCAAAACTGGTGGAGTTCTCA Pucrasia_macrolopha TACAAATTTTGGGCATAGAAGATATTTTATCAAAACTGGTGGAGTTCTCG Syrmaticus_reevesii TACAAATTTTGTGCATAGAAGATATTTTATCAAAACTGCTGGAGTTCTCG Tetraophasis_szechenyii CACAAATTT-GTACATAGAAGATATTTTATCAAAACTGGTGGAGTTCTCG Tragopan_temminckii TACAAATTTTGTGCATAGAAGATATTTAATCAAAACTGCTGGAGTTGTCA Arborophila_ardens GCACTATGCAAGATACTTCTGACACTCTGCTGTCATTCCTGACTCACTTG Arborophila_brunneopectus GCACTATGCAAGATACTTCTGACACTCTGCTGTCATTCCTGACTCACTTG Anas_platyrhynchos GCACTAGGCAAGATACTTCTGACACTCTTCTATCACTTCTGAGTCACTTG Arborophila_rufipectus GCACTATGCGAGACACTTCTGACACTCTGCTGTCATTCCTGACTCACTTG Chrysolophus_amherstiae GTACTATGCAAGATACTTTTGACACTCTGCTGTCATTCCTGACTCACTTG Gallus_gallus GCACTATACAAGATACTTTTGACACT--GCTGGCTTTCCTGACTCACTTG Lophophorus_lhuysii GCACTATGCAAGATACTTTTGACACTCTGCTGTCATTCCTGACTCACTTG Meleagris_gallopavo GCACTATGCAAGATACTTTTGACACTCTGCTGTCATTCCTGACTCACTTG Phasianus_colchicus GTACTATGCAAGATACTTTTGACACTCTGCTGTCATTCCTGACTCACTTG Pucrasia_macrolopha GCACTATGCAAGATACTTTTGACACTTTGCTGTCATTCCTGAATCACTTG Syrmaticus_reevesii GTACTATGCAAGATACTTTTGACACTCTGCTGTCATTCCTGACTCACTTG Tetraophasis_szechenyii GCACTATGCAAGATACTTTTGACACTCTGCTGTCATTCCTGACTCACTTG Tragopan_temminckii -TACTGTGCA-GATACTTTTGACACTCCGCTGTCATTCCTGACTCACTTG Arborophila_ardens AGA-----AGTACATTAGTGTCTTAAAATAATGATTGCTGTTTCATAATT Arborophila_brunneopectus AGA-----AGTACATTAGTGTCTTAAAATAATGATTGCTGTTTCATAATT Anas_platyrhynchos GACATTTAAGTGCATTAATGTCTTAAAATAATGATAGCTGTTTCATAATC Arborophila_rufipectus AGA-----AGTACATTAGTGTCTTAAAATAATGATTGCTGTTTCATAATT Chrysolophus_amherstiae AACATTTAAGTACATTAATGTCTTAAAATAATGATTGCTGTTTCATAATC Gallus_gallus AACATTTAAGTACATTAATGTCTTAAAATAATGATTGCTGTTTCATAATC Lophophorus_lhuysii AACATTTAAGTACATTAATGTCTTAAAATAATGATTGCTGTTTCATAATC Meleagris_gallopavo AACATTTAAGTACATTAATGTCTTAAAATAATGATTGCTGTTTCATAATC Phasianus_colchicus AACATTTAAGTACATTAATGTCTTAAAATAATGATTGCTGTTTCATAATC Pucrasia_macrolopha AACATTTAAGTACATTAATATCTTAAAATAACGATTGCTGTTTCATAATC Syrmaticus_reevesii AACATTTAAGTACATTAATGTCTTAAAATAATTATTGCTGTTTCATAATC Tetraophasis_szechenyii AACATTTAAGTACATTAATATCTTAAAATAATGATTGCTGTTTCGTAATC Tragopan_temminckii AACATTTAAGGACATTAATGTCTTAAAATAATGATTGCTGTTTCATAATC Arborophila_ardens CAGCAGGCTCTAACAGGGAATGATAGCGAGGGTATAAGGATGTTACTTAG Arborophila_brunneopectus CAGCAGGCTCTAACAGGGAATGATAGCGAGGGTATAAGGATGTTACTTAG Anas_platyrhynchos TAGCAGGCTCTG-CAGGAAATGATAGCAAGGGTATATGGACATAACTTAG Arborophila_rufipectus CAGCAGGCTCTAACAGGGAATGATAGCAAGGGTATAAGGATGTTACTTAG Chrysolophus_amherstiae TAGCAGGCTCTAACAGGGAATGATAGSAAGGGTATAAGGGCGTTACTTAG Gallus_gallus TAGCAGGCTCTAACAGGGAATGATAGCAAGGGTATAAGGGCGTTACTTAG Lophophorus_lhuysii TAGCAGGCTCTAACAGGGAATGATAGCAAGGGTATAAGGGCGTTACTTAG Meleagris_gallopavo TTGCAGGCTCTAACAGGGAATGATAGCAAGGGTATAAGGGCGTTACTTAG Phasianus_colchicus TAGCAGGCTCTAACAGGGAATGATAGCAAGGGTATAAGGGCGTTACTTAG Pucrasia_macrolopha TAGCAGGCTCTAACAGGGAATGATAGCAAGGGTATAAGGGCGTTACTTAG Syrmaticus_reevesii TAGCAGGCTCTAACAGGGAACGATAGCAAGGGTATAAGGGCGTTACTTAG Tetraophasis_szechenyii TAGCAGGCTCTAACAGGGAATGATAGCAAGGGTATAAGGGCGTTACTTAG Tragopan_temminckii TAGCAGGCTCTAACAGGGAATGATAGCAAGGG--------CGTTACTTAG Arborophila_ardens GAATGGTGTGAAGTTAATTACATAAGGAATGTGAGGCCACAAGGCCTGCT Arborophila_brunneopectus GAATGGTGTGAAGTTAATTACATAAGGAATGTGAGGCCACAAGGCCTGCT Anas_platyrhynchos GAGTGGTGTGAAGTTA----TATAAGGAGTGTGAAGCCACAAGGCCTGTT Arborophila_rufipectus GAATGGTGTGAAGTTAATTACATAAGGAATGTGAGGCCACAAGGCCTGCT Chrysolophus_amherstiae GAATGGTGTGAAGTTAATTACATAGGGAATGTGAGGACACAAGGCCTGCT Gallus_gallus GAATGGTGTGAAGTTAATTACATAAGGAATGTGAGGCCCCAAGGCCTGTT Lophophorus_lhuysii GAATGGTGTGAAGTTAATTACATAGGGAATGTGAGGCCACAAGGCCTGCT Meleagris_gallopavo GAATGGTGTGAAGTTAATTACATAGGGAATGTGAGGCCACAAGGCCTGCT Phasianus_colchicus GAATGGTGTGAAGTTAATTACATAGGGAATGTGAGGACACAAGGCCTGCT Pucrasia_macrolopha GAATGGTGTGAAGTTAATTACATAGGGAATGTGAGGCCACAAGGTCTGCT Syrmaticus_reevesii GAATGGTGTGAAGTTAATTACATAGGGAATGTGAGGACACAAGGCCTGCT Tetraophasis_szechenyii GAATGGTGTGAAGTTAATTACATAGGGAATGTGAGGCCACAAGGCCTGCT Tragopan_temminckii GAATGGTGTGAAGTTAATTACATAGGGAATGTGAGGCCACAAGGCCTGCT Arborophila_ardens GAGATACCTTGGGAGGGCTGTGCTGGGCTCTAATGCAGCCCCATCTGTAC Arborophila_brunneopectus GAGATACCTTGGGAGGGCTGTGCTGGGCTCTAATGCAGCCCCATCTGTAC Anas_platyrhynchos GAGATAGTATGGGAGGATTGTTCTGGGCTGTAATGCAGCCTTATCCATAC Arborophila_rufipectus GAGATACCTTGGGAGGGCTGTGCTGGGCTCTAATGCAGCCCCATCTGTAC Chrysolophus_amherstiae GAGATACCTTGGGAAGGCTGTGCTGGGCTCTAATGCAGCCCCATCTGTAC Gallus_gallus GAGATACCTTGGGAGGGCTGTGCTGGGCTCTAATGCAGCCCCATCTGTAC Lophophorus_lhuysii GAGATACTTTGGGAGGGCTGCGCTGGGCTCTAATGCAGCCCCATCTGTAC Meleagris_gallopavo GAGATACCTTGGAAGGGCTCTGCTGGGCTCTAATGCAGCCCCATCTGTAC Phasianus_colchicus GAGATACCTTGGGAAGGCTGTGCTGGGCTCTAATGCAGCCCCATCTGTAC Pucrasia_macrolopha GAGATACCTTGGGAGGGCTGTGCTGGGCTCTAATGCAGCCCCTTCTGTAC Syrmaticus_reevesii GAGATACCTTGGGAAGGCTGTGCTGGGCTCTAATGCAGCCCCATCTGTAC Tetraophasis_szechenyii GAGATACCTTGGGAGAGCTGTGCTGGGCTCTAATGCAGCCCCATCTGTAC Tragopan_temminckii GAGATACCTTGGGAAGGCTGTGCTGAGCTCTAATGCAGCCCCATCTGTAC Arborophila_ardens AGCCTATAAATAGAGCTGCTGGAGTGATCTTTCCCTCAATCTGCTCCTGG Arborophila_brunneopectus AGCCTATAAATAGAGCTGCTGGAGTGATCTTTCCCTCAATCTGCTCCTGG Anas_platyrhynchos AGCCTATAAATAGAGCTGCTGCAGTGATCTTTCCCCCAAGCTGTTCCTGG Arborophila_rufipectus AGCCTATAAATAGAACTGCTGGAGTGATCTTTCCCTCAATCTGCTCCTGG Chrysolophus_amherstiae AGCCTATAAATAGAGCTGCTGGAGTGATCTTTCCCTCAAGCTGCTCCTGG Gallus_gallus AGCCTATAAATAGAGCTGCTGGAGTGATCTTTCCCTCAAGCTGCTC-TGG Lophophorus_lhuysii AGCCTATAAATAGAGCTGCTGGAGTGATCTTTCCCTCAAGCTGCTCTTGG Meleagris_gallopavo AGCCTATAAATAGAGCTGCTGGAGTGATCTTTCCCTCAAGCTGCTCCTGG Phasianus_colchicus AGCCTATAAATAGAGCTGCTGGAGTGATCTTTCCCTCAAGCTGCTCCTGG Pucrasia_macrolopha AGCCTATAAATAGAGCTGCTGGAGTGATCTTTCCCTCAAGCTGCTCATGG Syrmaticus_reevesii AGCCTATAAATAGAGCTGCTGGAGTGATCTTTCCCTCAAGCTGCTCCTGG Tetraophasis_szechenyii AGCCTATAAATAGAGCTGCTGGAGTGATCTTTTCCTCAAGCTGCTCCTGG Tragopan_temminckii AGCCTATAAATAGAGCTGCTGGAGAGATCCTTCCCTCAAGCTGCTCCTGG Arborophila_ardens GATTTGCTTCAGATCAAGCCACTTTGGACACTCAGAGACCATGTTGAGGG Arborophila_brunneopectus GATTTGCTTCAGATCAAGCCACTTTGGACACTCAGAGACCATGCTGAGGG Anas_platyrhynchos GATTTCCTTCAGATCAAGCCACTTTGGACACTCAGAGACCATGCTCAGGG Arborophila_rufipectus GATTTGCTTCAGATCAAGCCACTTTGGACACTCAGAGACCATGCTCAGGG Chrysolophus_amherstiae GATTTGCTTCAGATCAAGCCACTTTGGACACTCAGAGACCATGCTCAGGG Gallus_gallus GATTTGCTTCAGATCAAGCCACTCTGGTCACTCAGAGACCATGCTCAGGG Lophophorus_lhuysii GATTTGCTTCAGATCAAGCCACTTTGGACACTCAGAGACCATGCTCAGGG Meleagris_gallopavo GATTTGCTTCAGATCAAGCCACTTTGGACACTCAGAGACCATGCTCAGGG Phasianus_colchicus GATTTGCTTCAGATCAAGCCACTTTGGACACTCAGAGACCATGCTCAGGG Pucrasia_macrolopha GATTTGCTTCAGAGCAAGCCACTTTAGATACTCAGAGACCATGCTCAGGG Syrmaticus_reevesii GATTTGCTTCAGATCGAGCCACTTTGGACACTCAGAGACCATGCTCAGGG Tetraophasis_szechenyii GATTTGCTTCAGATCAAGCCACTTTGGACACTCAGAGACCATGCTCAGGG Tragopan_temminckii GATTTGCTTCAGATCAAGCTACTTTGGACACTCAGAGACCATGCTCAGGG Arborophila_ardens ACACTCACATTTCTGCAGTGAT--ATCAGCACCTGCCCCTCTACTGGAAT Arborophila_brunneopectus ACACTCACATTTCTGCAGTGATACATCAGCACCTGCCCCTCTACCTGGTT Anas_platyrhynchos ACTATCATGTATCTTCAGCGATCAATCAGCGCCTGCCCCTCTGTTTTCTA Arborophila_rufipectus ACACTCACATTTCTGCAGTGATACATCAGCACCTGCCCCTCTACTGGAAT Chrysolophus_amherstiae ACACTCATATTTCTGCAGCGGTACATCAGCACCTGCTCCTCTATTCCTGG Gallus_gallus ACACTCATATTTCTGCAGTGATACATCAGCACCTGCCCCTCTATTCCCAG Lophophorus_lhuysii ACACTCGTATTTCTGCAGTGATACATCAGCACCTGCTCCTCTATTCCCAG Meleagris_gallopavo ACACTCGTATTTCTGCAGTGATACATCAGCACCTGCTCCTCTATTCCCAG Phasianus_colchicus ACACTCATATTTCTGCAGCGATACATCAGCACCTGCTCCTCTATTCCCAG Pucrasia_macrolopha ACACTCATATTTCTGCAGTGATACATCAGCACCTGCTCCTCTATTCCCAG Syrmaticus_reevesii ACACTCATATTTCTGCAGCGATACATCAGCACCTGCTCCTCTATTCCCAG Tetraophasis_szechenyii ACACTCGTATTTCTGCAGTGATACATCAGCACCTGCTCCTCTATTCCCAG Tragopan_temminckii ACACTCGTATTTCTGCAGTGATACATCAGCACCTGCTCCTCTATTCCCAG Arborophila_ardens GGCAGTGGTCATGGCCCCGAGCTGCTGGAGTTCAAGAAGCATTTGGGCAA Arborophila_brunneopectus GGCAGTGGTCATGGCCCCGAGCTGCTGGAGTTCAAGAAGCATTTGGGCAA Anas_platyrhynchos GGAAGTGGTCGTGGCACCAATCTGCTGGATTTCAAGAACTATTTGGTATC Arborophila_rufipectus GGCAGTGGTTATGGCCCCGAGCTGCTGGAGTTCAAGAAACATTTGTGCAA Chrysolophus_amherstiae GGTAGTGGTCATGGCCCCAAACTGCTGGAGTTCAAGAAGCATTTGGACAA Gallus_gallus GGCAGTGGTCGTGGCTCCAAGCTGCTGGAGTTCAAGAAACATTTGGACAG Lophophorus_lhuysii GGCAGTGGTCATGGCCCCAAGCTGCTGGAGTTCAAGAAACATTTGGGCAA Meleagris_gallopavo GGCACTGGTCATGGCGCCAAACTGCTGGAGTTCAAGAAACATTTGGGCAA Phasianus_colchicus GGCAGTGGTCATGGCCCCAAGCTGCTGGAGTTCAAGAAACATTTGGGCAA Pucrasia_macrolopha GACAGTGGTCATGGCCCCAAGCTGCTGGAATTCAAGAAACCTTTGGACAA Syrmaticus_reevesii GGCAGTGGTCATGGCCCCAAGCTGCTGGAGTTCAAGAAGCATTTGGGCAA Tetraophasis_szechenyii GGCAGTGGTCATGGCCCCAAGCTGCTGGAGTTCAAGAAACATTTGGGCAA Tragopan_temminckii GGCAGTGGTCATGGCCCCAAGCTGCTGGAGTTCAAGAAACATTTGGGCAA Arborophila_ardens TGCTCTCATACACACAGTTTGATTTGGTGTGAAGCTACTTACTTTTTTTT Arborophila_brunneopectus TGCTCTCATACACACAGTTTGATTTGGTGTGAAGCTACTTACTTTTTTTT Anas_platyrhynchos ATCGTTAATAAGCACATTTT-----------AAGCTGCCTTTTTTTTTTC Arborophila_rufipectus TGCTGTCATACACACAGTTTGATTTGGTGTGAAGCTACTTACTTTTTTTT Chrysolophus_amherstiae CACTCTCATACACACAATTTCATTTTGTGTGAAGCTACTTTCTTTTTTTT Gallus_gallus CGCTCTCATACACACAATTTGATTTTGTGTGAAGCTACTTTCTTTTTTGT Lophophorus_lhuysii CGCTGTGATACACACAATTTGATTTTGTGTGAAGCTACTTTCTTTTTTTT Meleagris_gallopavo CCCTCTCATATGCACAATTTGATTTTGTGTGAAGCTACTTTCTTTTTTTT Phasianus_colchicus CGCACTCATACACACAATTTCATTTTGTGTGAAGCTACTTTCTTTTTTTT Pucrasia_macrolopha CACTCTCATACACACAATTTGATTTTGTGTGAAGCTACTTTTTTTTTTTT Syrmaticus_reevesii CACTCTCATACACACAATTTCATTTTGTGTGAAGCTACTTTCTTTTTTTT Tetraophasis_szechenyii CACTCTCATACACACAGTTTGATTTTGTGTGAAGCTACTTTCTTTTTTTT Tragopan_temminckii CACTCTCATGCACACAATTTGATTTTGTGTGAAGCTACTTTCTTTTTTTT Arborophila_ardens CCTTATTATTCTTATATGGAAAACGAGCTGAGTGAAGCCTTTGAAATCAA Arborophila_brunneopectus CCTTATTATTCTTATATGGAAAACGAGCTGAGTGAAGCCTTTGAAGTCAA Anas_platyrhynchos TT-------TCTCATGTGGGAAATCTAGCAGGTGAAAATTCTGAAGTCAG Arborophila_rufipectus CCTTCTTATTCTTATATGGAAAACCAGCTGAGTGAAGCCTTTGAAGTCAA Chrysolophus_amherstiae CCTTCTTGTTCTTATATGGAAAACTTGCTGGGTTAAACCTTTGAAGTCAA Gallus_gallus CTATCTTGTTTTTATATGGAAAACTAGCTGGGTGAAACCTTTGAAGTCAA Lophophorus_lhuysii CCTTCTTGTTCTTATATGGAAAACTTATTGGTTTAAACCTTTGAAGTCAA Meleagris_gallopavo CCTTCTTGTTCTTATATGGAAAGCTAGCTAGATTAAACCTGTGAAGTCAA Phasianus_colchicus CCTTCTTGTTCTTATATGGAAAACTTGCTGGGTTAAACCTTTGAAGTCAA Pucrasia_macrolopha TTTTCTTGTTCTTATATGGAAAACTTGCTAGGTTAAACCTTTCAAGTCAA Syrmaticus_reevesii CCTTCTTGTTCTTATATGGAAAACTTGCTCTTTTGCAAGCTCTAAGTCAA Tetraophasis_szechenyii CCTTCTTGTTCTTATATGGAAAACTTACTGGGTTAAACCTTTTAAGTCAA Tragopan_temminckii CCTTCTTGTTCTTATATGGAAAACTTGCTGGGTTAAACCTTTGAAGTCAA Arborophila_ardens ATATGCCTGTTTACAGTGCCAGGCAGCCCTCCATGCCTGCTCTCAGTGCT Arborophila_brunneopectus ATATGCCTGTTTACGGTGCCAGGCAGCCCTCCATGCCTGCTCTCAGTGCT Anas_platyrhynchos GCATGTCTGTGTACTGCGCCGGCAACACCTCCATGCCCACTCTCAGCGCT Arborophila_rufipectus ATATGCCTGTTTACGGTGCCAGGCAGCCCTCCATGCCTGATCTC-GTGCT Chrysolophus_amherstiae GCATGCCTGTATA-AGTGCCAGATAATCCTCCAAGCCTGCTCTCAGTACT Gallus_gallus GCATGCCTGTATACGGTGCCCGACAACCCTCCATGCCTGCTGTCAGTGCT Lophophorus_lhuysii GCATGCCTGTATA-GGTGCCAGACAACCCTCTATGCTTGCTCTCAGTGCT Meleagris_gallopavo GCATGCCTGTATACGGTGCCAGACAACCCTCCATGCCTGCTCTCAGTGCT Phasianus_colchicus GCATGCCTGTATA-GGGGCCAGATAACCCTCCATGCCTGCTCTCAGTACT Pucrasia_macrolopha GCATGCCTGTGTACGGTGCCAGACAACCCTCCATGCCTGCTCTCAGTGCT Syrmaticus_reevesii GCATGCCTGTATA-GGTGCCAGGTAACCCTCCATGTCCGCTCTCAGTACT Tetraophasis_szechenyii GCATGCCTGTATA-AGTGCCAGACAACCCTCCATGCCTGCTCTCAGTGCT Tragopan_temminckii GCATGCGTGTATA-GGTGCCAGACAACCCTCCATGCCTGCTCTCAGTGCT Arborophila_ardens CTTGCACCAGGACAGCCATACATCTCTGCAGGACT----TGGTGTGAACC Arborophila_brunneopectus CTTGCACCAGGACAGCCATGCATCTCTGCAGGACT----TGGTGTGAACC Anas_platyrhynchos CTTGGGCCAGGGCAGCTGTATGTCTCTGCAGGGCCTCCCTGGTATGAACC Arborophila_rufipectus CTTGCACCAGGACAGCCATACATCTCTGCAGGACCTCCTTGGTGTGAACC Chrysolophus_amherstiae CTTGCACCAGGGCAGCCACACCTCTCTGCAAGACCTCCTTGATACGAACA Gallus_gallus CTTGCACCAGGGCAGCCATATGTCTCTGCAGGACCTCCTTGGTATGAACC Lophophorus_lhuysii CTTGCACCAGGGCAGCCATACGTCTCTGCAGGACCTCCTTGATATGAACA Meleagris_gallopavo CTTGGACCTGGGCAGCCACACATCTCTGCAGGACCTCCTTGATATAAACA Phasianus_colchicus CTTGCACCAGGGCAGCCACATGCCTCTGCAAGACCTCCTTGATATGGACA Pucrasia_macrolopha CTTACACCTGAGCAGCCACACATTTCTGCAGGACCTCCTTAATATGAACA Syrmaticus_reevesii CTTGCACCAGGGCAGCCACACGCCTCT--------TCCTTGATATGAACA Tetraophasis_szechenyii CTTGCACCAGGGCAGCCATATGTCTCTGCAGGACCTCCTTGATATGAACA Tragopan_temminckii CTTGCACCAGGGCAGCCATACCTCTCTGCAGGACCCCCTTGATACGAACA Arborophila_ardens TTCTTGCACACACAATGTTACTCTTCTAAAATAATGGTAACAGAACGTCT Arborophila_brunneopectus TTCTTGCACACACAATGTTACTCTTCTAAAATAATGGTAACAGAACGTCT Anas_platyrhynchos TTCTCACATGTAAAATGTGGCTCTTTTAAAATAAT---AACAAATCATCT Arborophila_rufipectus TTCTTGCACACACAATGTTACTCTTTTAAAATAATGGTAACAGAACGTCT Chrysolophus_amherstiae TTCTTGCACAAACTATGTTACTCTT--AAATTAATGGTAACAGAACATCT Gallus_gallus TTCTTGCACACACAATGTCACTCTTTTAAAATAATGGTAACA--ACGTCT Lophophorus_lhuysii TTCTTGTACACACTATGTTACTCTTTTAAAATAATGGTAACAGAACATCT Meleagris_gallopavo TTCTTGCACACACACTGTTACTCTTTTAAAATAATGGTAACAGAACATCT Phasianus_colchicus TTCTTGCACAAGCTATGTTACTCTT--AAAATAATGGTAACAGAACATCT Pucrasia_macrolopha TTCTTGCACACACTATGTTACTCTT--AAAATAATGGTAACAGAACATCT Syrmaticus_reevesii TTCTTGCACAAGCTATGTTACTCTT--AAATTAATGGTAACAGAACATCT Tetraophasis_szechenyii TTCTTGCACACACTATGTTACTCTTTTAAAATAATGGTAACAGAACATCT Tragopan_temminckii TTCTTGCACACACACTGTTACTCTTTTAAAATAATGGTAACAGAACATCT Arborophila_ardens TCCTTTCTTCTGGTCCCTAGAATGAAAACTTTTCCTAAAATACAGAGAAG Arborophila_brunneopectus TCCTTTCTTCTGGTCCCTAGAATGAAAACTTTTCCTAAAATACAGAGAAG Anas_platyrhynchos TCCCTTCTTCTGGTCTCTGGAATGAAAGCTTGTCCTTTAGCAGGGAGGAA Arborophila_rufipectus TCCTTTCT-------CCTAGAATGAAAACTTTTCCTTAAATACAGAGAAG Chrysolophus_amherstiae TCCCTTTTTCTGGTTTCTAGAATGAAAGCTTTTCCTTAAATACAGAGAAG Gallus_gallus TCCCTTCTTGTGGTCCCTAGAATGAAAACTTTTCCTTAAATACAGAGAA- Lophophorus_lhuysii TCCCTTCTTCTGGTCTCTAGAATGAAAACTTTTCCTTAAATACAGAGAAG Meleagris_gallopavo TCCCTTCTTCTGGTCTCTAGAATTAAAACTTTTCTTTAAATACAGAGAAG Phasianus_colchicus TCCCTTCT---GGTTTCTAGAATGAAAACTTTTCCTTAAATACAGAGAAG Pucrasia_macrolopha TCCCTTCTTCTGGTCTCTAGAATGAAAACTTTTCCTTAAATACAGAGAAG Syrmaticus_reevesii TCCCTTCTTCTGGTTTCTAGAATGAAAACTTTTCCTTAAATACAGAGAAG Tetraophasis_szechenyii TCCCTTCTTCTGGTCTCTAGAGTGAAAACTTTTCCTTAAATACAGAGAAG Tragopan_temminckii TCCCTTCTTCTGGTCTCTAGAATGAAAACTTTTCCTTAAATACAGAGAAG Arborophila_ardens GCCATTTCTGCAGCTGGAAAGCTGAAGCTGCCTCTGGAGCCACCAGGGAC Arborophila_brunneopectus GCCATTTCTGCAGCTGCAAAGCTGAAGCTGCCTCTGGAGCCACCAGGGAC Anas_platyrhynchos GCAACTTTTGCAGCTGGAGAGCTGAAGCTGCCTCTGGGGCCAGTGGGGAC Arborophila_rufipectus GCCATTTCTGCAGCTGGAAAGCTGAAGCTCCCTCTGGAGCAACCAGGGAC Chrysolophus_amherstiae GCCATTTTTTCAGTAGGAGAGCTGAAGCTGCCTCTGGAGCCAGCAAGGAT Gallus_gallus ----TTTCTGCAGCTGGAGAGGTGA-GAGGCCTATGGAGCCAGCAGGGAC Lophophorus_lhuysii GCCATTTCTGCAGCTGGAGAGCTGAAGCTGCCTCTGGAACCAGCAGGGAC Meleagris_gallopavo GCCATTTCTGCAGCTGGAGAGCTGAAGCTGCCTCTGGAGCCGGCAGGGAC Phasianus_colchicus GCCATTTCTGCAGCTGGAGAGCTGAAGCTGCCTCTGGAGCCAGCAGGGAC Pucrasia_macrolopha GCCACTTCTGCAGCTGGAGAGCTGAAGCTGCCTCTGAAGCCAGCAGGG-- Syrmaticus_reevesii GCCATTTCTGCAGCTGGAGAGCTGAAGCTGCCTCTGGAGCCAGCAGGGAC Tetraophasis_szechenyii GCCATTTCTGCAGCTGGAGAGCTGAAGCTGCCTCTGGAGCCAGCAGGGAC Tragopan_temminckii GCCATTTCTGCAGCTGGAGAGCTGAAGCTGCCTCCGGAGCCAACAGGGAT Arborophila_ardens A--CAGCCTTTCACTGCAGAAGCAGCTCTGGAGCTGAAGCAATGTAACAC Arborophila_brunneopectus A--CAGCCTTTCACTGCAGAAGCAGCTCTGGAGCTGAAGCAATGTAACAC Anas_platyrhynchos GCAGGGCCTTTCACTGCTGAAGCAGCTCCAGAGCTGAGGCAATGTGACAT Arborophila_rufipectus A--CAGCCTTTCACTGCAGAAGCAGCTCTGGAGCTGAAGCAATGTAACAC Chrysolophus_amherstiae ACACAACCTTTCACTGCAGAAGCAGCTCCAGAACTGAAGCAGTATAACAT Gallus_gallus ACACAGCCTTTTACTGCAGAAGCAGCTCCAGAGCTGAAGTAATATAACAT Lophophorus_lhuysii ACACAGCCTTTCACTGCAAAAGCAGCTCCAGAGCTGAAGCAGTATAACAT Meleagris_gallopavo ACACAGCGTTTCACTGCAGAAGCAGCTCCAGAGCTGAAGCAGTATAACAT Phasianus_colchicus ACACAACCTTTCACTGCAGAAGCAGCTCCAGAGCTGAAGCAGTATAACAT Pucrasia_macrolopha ----AGCCTTTCACTGCAGAAGCAGCTCCAGAGTTGAAGCAGTATAACAC Syrmaticus_reevesii ACGCAGCCTTTCGCTGCAGAAGCAGCTCCAGAGCTAAAGCAGTATAACAT Tetraophasis_szechenyii ACACAGCCTTTCACTGCAGAAGCAGCTCCAGAGCTGAAGCAGTATAACAT Tragopan_temminckii ACACAGTCTTTCACTGCAGAAGCAGCTCCAGAGCTGAAGCAGTATAACAC Arborophila_ardens TGGGACCCGGGCTAGCTGTGGCCTTTGGGATGCTGGT---CTGCCAGCTC Arborophila_brunneopectus TGGGACCCGGGCTAGCTGTGGCCTTTGGGATGCTGGT---CTGCCAGCTC Anas_platyrhynchos TGGGACC-AAGCTAGCTGTGGCCTTGGGGATGCTGATCTTGTGCCAGCTC Arborophila_rufipectus TGGGACCCGGGCTAGCTGTGGCCTTTGGGATGCTGGT---CTGCCAGCTC Chrysolophus_amherstiae TGGGACCTAAGCTAGCTGTGGCCTTTGGGATGCTGATTGCCTGCCAGCTC Gallus_gallus TGGGACCCAAGCTAGCTGTGGCCTTTGGGATGCTGATTGCCTGCCAGCTC Lophophorus_lhuysii TGGGACCCAAGCTAGCT-TGGCCTTTGGGATGCTGATTGCCTGCCAGCTC Meleagris_gallopavo TGAGACCTGAGCTAGCTGTGGTCTTTGGGATGGTGATTGCCTGCCAGCTC Phasianus_colchicus TGGGACCCAAGCTAGCTGTGGCCTTTGGGATGCTGATTGCCTGCCAGCTC Pucrasia_macrolopha TGGGACCTGAGCTAGCTGTGGCCTTTGGGATGCTGATTGCCTGCCAGCTC Syrmaticus_reevesii TGAGACCCAAGCTATCTGTGGCCTTTGGGATGCTGATTGCCTGCCAGCTC Tetraophasis_szechenyii TGGGACCCAAGCTAGCTGTGGCCTTTGAGATGCTGATTGCCTGCCAGCTC Tragopan_temminckii TGGGACCCGAGCTAGCTGTGGCCTTTGGGATGCTGATTGCCTGCCAGCTC Arborophila_ardens ACAGAGTGTCAGTGCTGGGCTGCAAAAGCAAGCATGTCTTGTACTTGCAC Arborophila_brunneopectus ACAGAGTGTCAGTGCTGGGCTGCAAAAGCAAGCATGTCTTGTACTTGCAC Anas_platyrhynchos CTGGGGTGTCAGTGCTGGGCTGCATCAGCAGGCATGTCTTGGACTTTCAA Arborophila_rufipectus ACAGAGTGTCAGTGCTGGGCTGCAAAAGCAAGCATGTCTTGTACTTGCAC Chrysolophus_amherstiae CCAGAGTGTCAGTGCTAGGCTGCAAAAGCAAGCATGTCTTGGACTTGCAC Gallus_gallus CCAGAGTGTCAGTGCTGGGCTGCAAAAGAAAGCATGTCTTGGACTTGCAC Lophophorus_lhuysii CCAGAGTGTCAGTGCTGGGCTGCAAAAGCAAGCATGTCTTGGACTTGCAC Meleagris_gallopavo CCAGAGTGTCAGTGCTGGGCTGCAAAAGCAAGCATGTCTTGGACTTGCAC Phasianus_colchicus CCAGAGTGTCAGTGCTGGGCTGCAAAACCAAGCATGTCTTGGACTTGAAC Pucrasia_macrolopha CCAGAGTGTCAGTGCTGGGCTGCAAAAGCAAGCATTTCTTGGACTTGCAC Syrmaticus_reevesii CCAGAGTGTCAGTGCTGGGCTGCAAAAGCAAGCATGCCTTGGACTTGCAC Tetraophasis_szechenyii CCAGAGTGTCAGTGCTGGGCTGCAAAAGCAAGCATGTCTTGGACTTGCAC Tragopan_temminckii CCAGAGTGTCASTGCTGGACTGCAAAAGCAAGCATGTCTTGGACTTGCAC Arborophila_ardens CAGAGTTGAAGTGGGAGTCTCCAGCTTGTCCCATATCTGAGATGTTGACA Arborophila_brunneopectus CAGAGTTGAAGTGGGAGTCTCCAGCTTGTCCCATATCTGAGAGTTTGGCA Anas_platyrhynchos CAAGGTCAAAGGGGGAGACATCATCTTGTCCCCTATCGTATACTTTTACA Arborophila_rufipectus CAGAGTCGAAGTGGGAGACTCCAGCTTGTCCCGTATCTGAGAGTTTGACA Chrysolophus_amherstiae CAGGGTCGAAGTGGGAGACTCCATCTTGTCCCATATCTGAGATGTTGATG Gallus_gallus CAGGGTTGAACTAGGAGACTCCAGCTTGTCCCATATCTGAGAGTTTGATG Lophophorus_lhuysii CAGGGTCGAAGTGGGAGATTCCAGCTTGTCCCATATCTGAGATGTTGATG Meleagris_gallopavo CAGGGTCGAAGTGGGAGACTCCAGCTTGTCCCATATCTGAGAGTTTGATG Phasianus_colchicus CAGGGTC-AAGTGGGAGACTCCATCTTGTCCC-TATCAAAAATGTTGATG Pucrasia_macrolopha CAGGGTTGAAGTGGGAGACTCCAGCTTGTCCCATATCTGAGAGTTTGATA Syrmaticus_reevesii CAGGGTCGAAGTGGGAGACTCCATCTTGTCCCATATCTGAGATGTTGATG Tetraophasis_szechenyii CAGGGTCGAAGTGGGAGACTCCAGCTTGTCCCATATCTGAGATGTTGA-G Tragopan_temminckii CAGGGTCAAAGTGGGAGACTCCAGCTTGTCCCATATCTGAGAGTTTGATG Arborophila_ardens CAATGCATGCTTCCAGGGGAACTATGA-GTACTATGAAAAAAGGGTTTCA Arborophila_brunneopectus CAATGCATGCTTCCAGGGGAACTATGA-GTATTATGAAAAAAGGGTTTCA Anas_platyrhynchos CCATACATGCTTCCAGGGGAACTATAAAGTATTAGGAAAAAACTGTTTTA Arborophila_rufipectus CAATGCATGCTTCCAGGGGAACTATGA-GTATTATGAAAAAAGGGTTTCA Chrysolophus_amherstiae CAATGCGTGCTTCCAGGGGAACTATGAAGTATTATGAAAAAAGGGTTTCA Gallus_gallus CAATGCATGCTTCCAGGGGAACTATGAAGTATTATGAAAAAAGGGTTTCA Lophophorus_lhuysii CAATGCATGCTTCCAGGGGAACTATGAAGTATTATGAAAAAAGGGTTTCA Meleagris_gallopavo CAATGCATGCTTCCAGGGGAACTATGAAATATTATGAAAAAAGGGTTTCA Phasianus_colchicus CAATGCGTGCTTCCAGGGGAACTATGAAGTATTATGAAAAAAGGGTTTCA Pucrasia_macrolopha CAATGCATGGTTCCAGGGGAACTATGAAGTATTATGAAAAAAGGGTTTTA Syrmaticus_reevesii CAATGCATGCTTCCAGGGGAACTATGAAGTATTATGAAAAAAGGGTTTCA Tetraophasis_szechenyii CAATTCATGCTTCCAAGGGAACTATGAAGTATTATGAAAAAAGGGTTTCA Tragopan_temminckii CAACGCATGCTTGCAGGGGAACTATGAAGTATTATGAAAAAAGGGTTTCA Arborophila_ardens CTTTTTAACATGGTTTTAAAGAGCAGTGCTTCAGAACGGTGTTTTCTAAT Arborophila_brunneopectus CTTTTTAACATGGTTTTAAAGAGCAGTGCTTCAGAACGGTGTTTTCTAAT Anas_platyrhynchos CTTTTTAACATGTTTTTTAACAGCAGTTTGTCAGATGGACTTTTTCTAAA Arborophila_rufipectus CTTTTTAACGTGGTTTTAAAGAGCAGTGCTTCAGAACGGTGTTTTCTAAT Chrysolophus_amherstiae CTTTTTAACATGGTTTTAAAGAGCAGTGCTTCAGAAGGACGCTTTCTAGT Gallus_gallus CTTTTTAACGTGGTTTTAAAGAGCAATTCTTCAGAAGGGTATTTTCTAAT Lophophorus_lhuysii CTTTTTAATGTGGTTTTAAAGAGCAATGCTTCAGAAGGATGTTTTCTAAT Meleagris_gallopavo CTTTTTAATGTGGTTTTAAAGAGCAGTGCTTCAGAAGGATGTTTTCTAAT Phasianus_colchicus CTTTTTAACATGGTTTTAAAGAGCAGTGCTTCAGAAGGATGCTTTCTAGT Pucrasia_macrolopha CTTTTTAACGTGGTTTTAAAGAGCAGTGTTTCAGAAGGATGTTTTCTAAT Syrmaticus_reevesii CTTTTTAACGTGGTTTTAAAGAGCAGTGCTTCAGAAGGATGTTTTCTAAT Tetraophasis_szechenyii CTTTTTAACGTGGTTTTAAAGAGTAATGCTTCAGAAGGATGTTTTCTAAT Tragopan_temminckii CTTTTTAACGTGGTTTTAAAGAGCAGTGCTTCAGAAGGATGTTTTCTAAT Arborophila_ardens GGAGAACTCTGGAGGTACTAAC---AATGTCTTTCTTTGAAACAGAATGT Arborophila_brunneopectus GGAGAACTCTGGAGGTACTAAC---AATGTCTTTCTTTGAAACAGAATGT Anas_platyrhynchos GGGTAACTCTGGACGTACTGAATCTGATGTCTTTGTTTGAATCAGAATGT Arborophila_rufipectus GGAGAACTCTGGAGGTACCAAC---AATGTCTTTCTTTGAAACAGAATGT Chrysolophus_amherstiae GGAGAACTCTGGAGGTACCAACTCTGATGTCTTTATTTGCAACAGAATGT Gallus_gallus GGAGAACTCTGGAGGTACCGGCTCTGATGTCTTTGTTTGCAACAGAATGT Lophophorus_lhuysii GGAGAACTCTGGAGGTACCAACTCTGATGTCTTT----GCAACAGAATGT Meleagris_gallopavo GGAGAGCTCTGGAGGTACCAACTCTGATGTCTTTGTTTGCAACGGAACGT Phasianus_colchicus GGAGAACTCTGGAGGTACCAACTCTGATGTCTTTATTTGCAACAGAATGT Pucrasia_macrolopha GGAGAGCTCTGGAGGTACCAACTCTGATGTCTTTGTTTGCAACAAAATGT Syrmaticus_reevesii GGAGAACTCTGGAGGTACCAACTCTGATGTCTTTATTTGCAACAGAATGT Tetraophasis_szechenyii GGAGAACTCTGGAGGTACCAACTCTGATGTCTTT----GCAACAGAATGT Tragopan_temminckii GAAGAACTCTGGAGGTACCAACTCTGATGTCTTT----GCAACAGAATGT Arborophila_ardens CACAGCCATGCTTTTTACGGTCAAAAGCGTAATTCAGTGATATGTTCATT Arborophila_brunneopectus CACAGCCATGCTTTTTACGGTCAAAAGCGTAATTCAGTGATATGTTCATT Anas_platyrhynchos CATCACCACTCTTTCTAAGGTCAAAAGCATAATTCAATGATATATTCGTT Arborophila_rufipectus CACAGCCACGCTTTTTACGGTCAAAAGCATAATTCAGTGATATGTTCATT Chrysolophus_amherstiae CACAGCCACGCTTTCTAAGGTCAAAAGCGTAATTCAGTGATATGTTCATT Gallus_gallus CACAACCACGCTTTCTAAGATCAAAAGCATAATTCAGTGATCTGTTCATT Lophophorus_lhuysii CACAGCCACGCTTTCTAAGGTCAAAAGCGTAATTCAGTGATATGTTCATT Meleagris_gallopavo CACAGCCACACTTTCTAAGTACAA---CGTAATTCAGTGATATGTTCATT Phasianus_colchicus CACAGCCATGCTTTCTAAGGTCAAAAGCGTAATTCAGTGATAYGTTCATT Pucrasia_macrolopha CACAGCCACACTTTCTAAGGTCAAAAGCGTAATTCAGTGATATGTTCATT Syrmaticus_reevesii CACAGCCACGCTTTCTAAGGTCAAAAGCGTAATTCTGTGATATGTTCATT Tetraophasis_szechenyii CACAGCCACGCTTTCTAAGGTCAAAAGCGTAAGTCAGTGATATGTTCATT Tragopan_temminckii CACAGCCACGCTTTCTAAGGTCAAAAGCGTAATTCAGTGATATGTTCATT Arborophila_ardens GTAATATTCATTTTGCTTTGAATTT-------GAAAGGTGTTTAAATGTG Arborophila_brunneopectus GTAATATTCATTTTGCTTTGAATTT-------GAAAGGTGTTTAAATGTG Anas_platyrhynchos GTACTGTTCCTATTGTTTTGAATTTCTTCTTCATTAGGTGTTTAAATATG Arborophila_rufipectus GTAATATTCATTTTGCTTTGAATTT-------GAAAGGTGTTTAAATGTG Chrysolophus_amherstiae GTAATACTCCTTTTGCTTTGAATTTCTTCTTCATCAGGTGTTTAAATATG Gallus_gallus GTAATACTTCTTTTGCTTTGAATTTCTTCTTCACCAGGTGTTTA------ Lophophorus_lhuysii GTAATACTCCTTTTGCTTTGAATTTCTTCTTCACCAGGTGTTTAAATATG Meleagris_gallopavo GTAATACTCCTTTTGCTTTGAATTTCTTCTTCACCAGGTGTTTAAATATG Phasianus_colchicus GTAATACTCCTTTTGCTTTGAATTTCTTCTTCATCAGGTGTTTAAATATG Pucrasia_macrolopha GTAATACTCATTTTGCTTTGAATTTCTTCTTCACAAGCTGTTTAAATATG Syrmaticus_reevesii GTAATACTCCTTTTGCTTTGAATTTCTTCTTCATCAGGTGTTTAAATATG Tetraophasis_szechenyii GTAATACTCCTTTTGCTTTGAATTTCTTCTTCACCAGGTGTTTAAATATG Tragopan_temminckii GTAAAACTCCTTCTGCTTTGAATTTCTTCTTCACCAGGTGTTTAAATATG Arborophila_ardens AGTTGGTGTACAAAAAGGAGATGTTACTACTGTAGGTAAACAGTTAGGGC Arborophila_brunneopectus AGTTGGTGTACAAAAAGGAGATGTTACTACTGTAGGTAAACAGTTAGGGC Anas_platyrhynchos AGTTGGCATGACAAAAGGAGACTTTACCACTGTAGGTAGACAGTT----- Arborophila_rufipectus AGTTGGTGTACAAAAAGGAGATGTTACTACTGTAGGTAAACAGTTAGGGC Chrysolophus_amherstiae AGTTGATGTGCAAAAAGGAGACAGTACTACTGCAGGTAAACAGTTAGGAC Gallus_gallus -GTTGGTGTGCAAAAAGGAGACATTACTGCTGTGGGTAAACAGTTAGGGC Lophophorus_lhuysii AATTGATGTGCAAAAAGGAGACAGTACTACTGTAGGTAAAAAGTTAGGGC Meleagris_gallopavo AGTTGATGTGCAAAAAGGAGACAGTACGACTGTAGGTAAACAGTTAGGGC Phasianus_colchicus AGTTGATGTGCAAAAAGGAGACAGTACTACTGTAGGTAAACAGTTAGGGC Pucrasia_macrolopha AGTTGATG-----AAAGGAGACAGTACTACTGTGGGTAAACAGTTAGGGC Syrmaticus_reevesii AGTTGATGTGCAAAAA-------GTACTACTGTAGGTAAACAGTTAGGGC Tetraophasis_szechenyii AACTGATGTGCAAAAAGGAGACAGTACTACTGTAGGTAAAAAGTTAGGGC Tragopan_temminckii AGTTGATATGAAAAAAGGAGACAGTACTACTGTAGGTAAACAGTTAGGGC Arborophila_ardens TTTTGGACACCACGGCAGATGTCTGAACTCAGGTTTCCTTGGTTATTCTT Arborophila_brunneopectus TTTTGGACACCACGGCAGATGTCTGAACTCAGGTTTCCTTGGTTATTCTT Anas_platyrhynchos ---------------------------------------------TTTTT Arborophila_rufipectus TTTTGGACACCAGGGCAGATGTCTGAACTCGGGTTTCCTTGGTTATTCTT Chrysolophus_amherstiae TTTTGGATGCTAGGGCAGATTTCTGATCTCAGATTTCCTTGGTTATCTTT Gallus_gallus TTTTGGACACCAGGGCAGATTTCTGATCTCAGGTTTCCTCGGTTATCTTT Lophophorus_lhuysii TTTTGGACACCAGGGCAGATTTCTGATCTCAGGTTTCCTTGGTTATCTTT Meleagris_gallopavo TTTTGGACACCAGGGCAGATTTCTGATCTCAGGTTTCCTTGGTTATCTTT Phasianus_colchicus TTTTGAACGCTAGGGCAGATTTCTGATCTCAGATTTCCTTGGTTATCTTT Pucrasia_macrolopha TTTTGGATGCCAGGGCAGATTTCTGATCTCAGGTTTCCTTGGTTATCTTT Syrmaticus_reevesii TTTTGAATGCTAGGGCAGATT-CTGATCTCAGATTTCTTTGGTTATCTTT Tetraophasis_szechenyii TTTTGGATGCCAGGGCAGATTTCTGATCTCAGGTTTCCTTGGTTATCTTT Tragopan_temminckii TTTTGGACGCCAGGGCAGATTTCTGATCTCAGGTTTTCTTGGTTATCTTT Arborophila_ardens TCTGCAAACAGCCATTTTTTCTTAGCAGAAATACTATTCCTCTGTTTCTG Arborophila_brunneopectus TCTGCAAACAGCCATTTTTTCTTAGCAGAAATACTATTCCTCTGTTTCTG Anas_platyrhynchos TTT-----------TTTTTTTTTTCTAGAAATACTATTTTCCTGTTTCAG Arborophila_rufipectus TCTGCAAAAAGCCATTTTTTCTTAGCAGAAATACTATTCCTCTGTTTCTG Chrysolophus_amherstiae TCTGCAAACAGCCATTTTTTCTTACCAGAAATACTATTCCCCTGTTTCTG Gallus_gallus TCTGCAAACAGCCATTTTTTCTTACCAGAAATACTATTCCCCCGTTTCTG Lophophorus_lhuysii TCTGCAAACAGCCATTTTTTCTTACCAGAAATACTATTCCTCTGTTTCTG Meleagris_gallopavo TCTGCAAACAGCCATTTTTTCTTACCAGAAATACTATTCCCCTGTTTCTG Phasianus_colchicus TCTGCAAACAGCCATTTTTTCTTACCAGAAATACTATTCCCCTGTTTCTG Pucrasia_macrolopha TCTGCAAGCAGCCATTTTTTCTTACCAGAAATACTATTCCCCTGTTTCTG Syrmaticus_reevesii TCTGCAAACAGCCATTTTTTCTTACCAGAAATACTATTCCCCTGTTTCTG Tetraophasis_szechenyii TCTGCAAACAGCCATTTTTTCTTACCAGAAATACTATTCCCCTGTTTCTG Tragopan_temminckii TCTGCAAACAGCCATTTTTTCTTACCAGAAATACTATTCCCCTGTTTCTG Arborophila_ardens ATCATTCTTTTGTCGCTGAGCCAACTCAGAAGCTTAAGATCATCATATTT Arborophila_brunneopectus ATCATTCTTTTGTCGCTGAGCCAACTCAGAAGCTTAAGATCATCATATTT Anas_platyrhynchos ATTGCTCTTGTGCTTCTGAGCCAGCTCAGAAGCTTAAGATCATCTTATTT Arborophila_rufipectus ATCATTCTTTTGTTGCTGAGCCAACTCAGAAGCTTAAGATCATCATATTT Chrysolophus_amherstiae ATCATTCTTTTGTCGCTGAGCCAATTCAGAAGCTTAAGATCATCATATTT Gallus_gallus ATCATTCTTTTGTCACTGAGCCAACTCAGAAGCTTAAGATCATCGTATTT Lophophorus_lhuysii ATCATTCTTTTGTCGCTGAGCCAACTCAGAAGCTTAAGATCATCATATTT Meleagris_gallopavo ATCATTCTTTTGTCACTGAGCCAACTCACAAGCTTAAGATCATCATATTT Phasianus_colchicus ATCATTCTTTTGTCGCTGAGCCAATTCGGAAACTTAAGATCATCATATTT Pucrasia_macrolopha ATCATTCTTTTGTCGCTGAGCCAACTCAGAAGCTTAAGATCATCATATTT Syrmaticus_reevesii ATCATTCTTTTGTCGCTGAGCCAATTCAGAAGCTTAAGATCAGCATATTT Tetraophasis_szechenyii ATCATTCTTTTGTCGCTGAGCCAACTCAGAAGCTTAAGATCATCATATTT Tragopan_temminckii ATCATTCTTTTGTCGCTGAGCCAACTCAGAAGCTTAAGATCATCATATTT Arborophila_ardens GTCATGGTAGCAGAAATCATTTAAATTTGA-TTTTATATCCTTTCACTTC Arborophila_brunneopectus GTCATGGTAGCAGGAATCATTTAAATTTGA-TTTTATATCCTTTCACTTC Anas_platyrhynchos GTCACTGTAACATAAATCGTGT-----TGATTTTGATCTCAGTTTTTCTC Arborophila_rufipectus GTCATGGTAGCAGAAATCATTTAAATTTGA-TTTTATATCCTTTCACTTC Chrysolophus_amherstiae GTCACGGTAACAGAAATCATTTAAATTTGACTTTTATATCCTTTTGCTTC Gallus_gallus GTCACGGTAGCAGAAATCATTTAAATTTGACTTTCATACCCTTTTGCTTC Lophophorus_lhuysii GTCACGGTAGCAGAAATCATTTAAATTTGACTTTTATATCCTTTTGCTTC Meleagris_gallopavo GTCATGGTAACAGAAATCATTTAAATTTGACTTTTATATCCTTTTGCTTC Phasianus_colchicus GTCACGGTAACAGAAATCATTTAAATTTGACTTTTATATCCTTTTGCTTC Pucrasia_macrolopha GTCACGGTAACAGAAATCATCTAAATTTGACTTTCATATCCTTTTGCTTT Syrmaticus_reevesii GTCACGGTAACAGAAATCATTTAAATTTGACTTTTATATCCTTTTGCTTC Tetraophasis_szechenyii GTCACAGTAGCAGAAATCATTTAAATTTGACTTTTATATCCTTTTGCTTC Tragopan_temminckii GTCATGGTAGCAAAAATCATTTAAATTTGACTTTTATATCCTTTTGCTTC Arborophila_ardens TAAACTGTCATCTCTAGCAAAATGTGTCTGCACTTTCATGGAGAACTAGC Arborophila_brunneopectus TAAACTGTCATCTCTAGCAAAATGTCTCTGCACTTTCATGGAGAACTAGC Anas_platyrhynchos TAAACTGTGATTTCTATCGAAGTGTTCCCATATTTTCATGGGGAACTAGT Arborophila_rufipectus TAAACTGTCATCTCTAGCAAAATGTGTCTGCACTTTCATGGAGAACTAGC Chrysolophus_amherstiae TAAACTGTCATCTCTAGCAAAATGTGTCTGCACTTTCATGGAGAACTAGC Gallus_gallus TAAACTGTCATCTCTAGCAAAATAAGTCTGCACTTTCATGGACAACTAGC Lophophorus_lhuysii TAAACTGTCATCTCTAGCAAAATGGTC--GCGCTTTCATGGAGAACTAGC Meleagris_gallopavo TAAACTGTCATCTCTAGCAAAATGTGTCTGCACTTTCATGGAGAACTAGC Phasianus_colchicus TAAACTGTCATCTCTAGCGAAATGCGTCTGCACTTTCATGGAGAACTAGC Pucrasia_macrolopha TAAACTGTCATCTCTAGCAAAATG-GTC-GCACTTTCATGGAGAACTAGC Syrmaticus_reevesii TAAACTGTCATCTCTAGCAAAATGTGTCTGCACTTTCATGGAGAACTAGC Tetraophasis_szechenyii TAAACTGTCGTCTCTAGCAAAAAG--------CTTTCATGGAGAACTAGC Tragopan_temminckii TAAACTGTCATCTCTAGCAAAATGTGCCTGCGCTTTCATGGAGAACTAGC Arborophila_ardens AGAACCCCCCAGTGGCACAGTGGGATTCAGCTTGGGTTTGGTGATTCCTG Arborophila_brunneopectus AGAAACCCCCAAGGGCACAGTGGGATTCAGCTTGGGTTTGGTGATTCCTG Anas_platyrhynchos ACATGGCTCAAAGGGCCTGCTAGGATTTTACTGTTGTTTTTTTATTCCTG Arborophila_rufipectus AG-TGGCTCCAAGGGCACAGTGGGATTCAGCTTGGGTTTGGTGATTCCTG Chrysolophus_amherstiae AGAACCCCCCAGGGGCACAGTGGGATTCAGCCTGGGTTTGCTGATTCCTG Gallus_gallus AGATGCCTCCAAGGGCACAGTGGGATTCAGCTTGGGTTTGGTGATTCTTT Lophophorus_lhuysii ATAACCCCCCAGGGGCACAGTGGGATTCAGCTTGGGTTTGGTGATTCCTG Meleagris_gallopavo AGATGGCTCCAAGGGCACAGTGGGATTGAG-TTAGGTTTGGTGATTCCTA Phasianus_colchicus AGAACCCCCCAGGGGCACAGTGGGATTCAGCTTGGGTT-GCTGATTCCTG Pucrasia_macrolopha AGAACCCCCCAGGGGCACAGTGGGATTCAGCTTGGGTTTGGTGATTCCTG Syrmaticus_reevesii AGAACCCCCCAGGTGCACAGTGGGATTCAGCTTGGGTTTGCTGATTCCTG Tetraophasis_szechenyii AGAACCCCCCAAGGGCACAGTGGGATTCAGCTTGGGTTTGGTGATTCCTG Tragopan_temminckii ATAATCCCCCAGGGGCACAGTGGGATTCAG-TTGGGTTTGGTGATTCCTG Arborophila_ardens CTGGGTTTTGCTGTATTTAGTGAAGGTGCAGAACGATTCTGTCAGCCCTA Arborophila_brunneopectus CTGGGTTTTGCTGTATTTAGTGAAGGTGCAGAACGATTCTGTCAGCCCTA Anas_platyrhynchos ATGATTTTTGCTGTGTTCATTGAAG-CGCAGGACTATTCTGTCAGTCCTA Arborophila_rufipectus CTGGGTTTCGCTGTATTTAGTGAAGGTGCAGAACGATTCTGTCAGCCCTA Chrysolophus_amherstiae CTGGTTTTTGCTGTATTTAGTGAAGGTGCAGAACAATTCTGTCGGCCCTA Gallus_gallus CTGGTTTTTGCTGTATTTAGTGGAGATGCAGAACAATTCTGTCAGCCCTA Lophophorus_lhuysii CTGGTTTTTGCTGTATTTAGTGAAGGTGCAGAACAATTCTGTCAGCCCTA Meleagris_gallopavo CTGGTTTTTGCTGTATTTAGTGAAGGTACAGAACAATTCTGTCAGCCCTA Phasianus_colchicus CTGGTTTGTGCTGTATTTAGTGAAGGTGCAGAACAATTCTGTCAGCCTTA Pucrasia_macrolopha CTGGTTTTTGCTGTATTTAGTGAAGGTGCAGAACAATTCTGTCAGCCCTA Syrmaticus_reevesii CTGGTTTGTGCTGTATTTAGTGAAGGTGCAGAACAATTCTATCGGCCCTA Tetraophasis_szechenyii CTGGTTTTTGCTGTACTTAGTGAAGGTGCAGAACAATTCTGTCAGCCCTA Tragopan_temminckii CTGGCTTTTGTTGTATTTAGTGAAGGCACAGAACAATTCTGTCAGCCCTA Arborophila_ardens CAGGAATAGAGATTATACCTGTAATTCATCTGCACACAGAGCCAGTCTTG Arborophila_brunneopectus CAGGAATAGAGATTATATCTGTAATTCATCTGCACACAGAGCCAGTCTTG Anas_platyrhynchos CTGGAATAGAGATTGTATCTGTAACTTGTCAGCACATGAACTCAGTTTTG Arborophila_rufipectus CAGGAATAGAGATTATATCTGTAATTCATCTGCACACGAAGCCAGTCTTG Chrysolophus_amherstiae CAGGAATAGGGATTATATCTGTAATTCATCTGCACACGAAGCCAGTCTTA Gallus_gallus CAAGAATAGGGATTATATCTGTAATTCATCTGTGCACGAAGCCAGTCTTG Lophophorus_lhuysii CAGCAATAGGGATTATATCCGTAATTCATCTGCACACGAAGCCAGTCTTA Meleagris_gallopavo CAGGAATAGGGATTATATCTGTAATTCATCTGCATACGAAGCCAGTCTTA Phasianus_colchicus CAGCAATAGGGATTATATCTGTAATTCATCTGCACACGAAGCCAGTCTTA Pucrasia_macrolopha CAGGAATAGGGATTATATCTGTAATTCATCTGCACACGAAGCCAGTCTTA Syrmaticus_reevesii CAGGAATAGGGATTATATCTGTAATTCAGCTGCACACGAAGCCAGTCTTA Tetraophasis_szechenyii CAGGAATAGGGATTATATCTGTAATTCATCTGCACACGAAGCCAGTCTTA Tragopan_temminckii CAGGAATAGGGATTATATCTGTAATTCACCTGCACACAAAGCCAGTCTTA Arborophila_ardens GAAATAACTCCCTGATGCTGT--------TGAGGGAAAAGTAAAAGGCCA Arborophila_brunneopectus GAAATAACTCCCTGATGCTGT--------TGAGGGAAAAGTAAAAGGCCA Anas_platyrhynchos AAAATAACTCTGT----TTCTCCATCTGTTGAGGGAAAAGTGCAAGGCCA Arborophila_rufipectus GAAATAACTCCCTGATGCTGTCCATTTGTTGAGGGAAAAGTAAAAGGCCA Chrysolophus_amherstiae AAAATAACTCCGTGATGCTGTCCATCTGTTGAGGGAAAAGTAAAAGGCCA Gallus_gallus AAAATAACTCCCTGATGCTGTCCATCTGTTGAGGGAAAAGTAAAAGGCCA Lophophorus_lhuysii AAAATAACTCCCTGATGCTGTCCATCTGTTGAGGGAAAAGTAAAAGGCCA Meleagris_gallopavo AAAATAACTCCGTGATGCTGTCCATCTCTTGAGGGAAAAGTAAAAGGCCA Phasianus_colchicus AAAATAACTCTGTGATGCTGTCCATCTGTTGAGGGAAAAGTAAAAGGCCA Pucrasia_macrolopha AAAATAACTCCCTGATGCTGTCCATCTGTTGAGGGAAAAGTAAAAGGCCA Syrmaticus_reevesii AAAATAACTCTCTGATGCTGTCCATCTGTTGAGGGAAAAGTAAAAGGCCA Tetraophasis_szechenyii AAAATAACTCCCTGATGCTGTCCATCTGTTGAGAGAAAAGTAAAAGGCCA Tragopan_temminckii AAAATAACTCCCTGATGCTGTCCATCTGTTGAGGGAAAAGTAAAAGGCCA Arborophila_ardens AGATGTAAGGCTGGGACTCAGCTGCACAAATGTCACTCTAGATGCTCCTT Arborophila_brunneopectus AGATGCCAGGCTGGGACTCAGCTGCACAAATGTCACTCTAGATGCTCCTT Anas_platyrhynchos AGATGCAAGGCTGGGACTCAGCTGCACAAACGTTGTTCTAGATGCTCCTC Arborophila_rufipectus AGATGCAAGGCTGGGACTCAGCTGCCCAAATGTCACTCTAGATGCTCCTT Chrysolophus_amherstiae AGATGCAAGGCAGGGACTCAGCTGCACAAATGTCACTGTAGATGCTCCTC Gallus_gallus AGATGCAAGGCTGGGACTCAGCTGCACAAATGTCACTCTAGATGCTCCTC Lophophorus_lhuysii AGATGCAAGGCTGGGACTCAGCTGCACAAATGTCACTCTGGATGCTCCTC Meleagris_gallopavo AGATGCAAAGCAGGGACTCAGCTGCGCAAATGTCACTGTGGATGCTCCTC Phasianus_colchicus AGAGGCAAGGCAGGGACTCAGCTGCACAAATGTCACTGTAGATGCTCCTC Pucrasia_macrolopha AGATGCAAGGCAGGGACTCAGCTGCACAAATGTCACTGTAGATGCTCCTC Syrmaticus_reevesii AGATGCAAGGCAGGGACTCAGCTGCACAAATGTCACTGTAGATGCTCCTC Tetraophasis_szechenyii AGATGCAAGGCTGGGACTCAGCTGCACAAATGTCACTCTAGATGCTCCTC Tragopan_temminckii AGAGACAAGGCTGGGACTCAGCTGCACAAATGTCACTGTAGATGCTCCTC Arborophila_ardens CAGTTGCCACTTCACATCAGTGCTTCTGTCTCTTGCCCCATGTTGCTCTG Arborophila_brunneopectus CAGTTGCCACTTCAGATCAGTGCTTCTGTCTCTTGCCCCATGTTGCTCTG Anas_platyrhynchos CAGTTGCCACTTCAGGTCAGTGCTCCTGTTCAATGCTCTTTGTTGCCCCC Arborophila_rufipectus CAGTTGCCACTTCAGATCAGTGCTTCTGTCTCTTGCCCCATGTTGCTCTG Chrysolophus_amherstiae CAGTTCCCACTTCAGATC--------TGTCTCTTGCCCCTTGTTGCCCTG Gallus_gallus CAGTTGCCACTTTAGATCAGTGCTTCTGCCCCTTGCCCCTTGTTGCTGTG Lophophorus_lhuysii CAGTTGCCACTTCAGATCAGTGCTTCTGTCTCTTTCCCCTTGTTGTCCTG Meleagris_gallopavo CAGTTGCCACTTCTGATCAGTGCTTCTGTCTCTTGCCCCTTGTTGCCCTG Phasianus_colchicus CAGTTCCCACTTCAGATC--------TGTCTCTTGCCCCTTATTGCCCTG Pucrasia_macrolopha CAGTTGCCACTTCTGATCAGTGCTTCTGTCTCTTGCCCCTCGTTGCCCTG Syrmaticus_reevesii CAGTTCCCACTTCAGATC--------TGTCTCTTGCCCTTGGTTGCCCTG Tetraophasis_szechenyii CAGCTGCCACTTCAGATCAGTGCTTCTGTCTCTTGCCCCTTGCTGTCCTG Tragopan_temminckii CAGTTGCCACTTCAGATCAGTGCTTCTGTCTCTTGCCCCTTGTTGCCCTG Arborophila_ardens CGTAGCTCTTTTTCAAGTCCTGCGCTACATCAGTTGGCCTGTTCTAGAAT Arborophila_brunneopectus CGTAGCTCTTTTTCAAGTCCTGCACTACATCAGTTGGCCTGTTCTAGAAT Anas_platyrhynchos TGTAGCTCTTTTGCGAGTCCTGTGCTACAACCACTGCCCTGGTCTGGATT Arborophila_rufipectus CGTAGCTCTTTTTCAAGTCCTGTGCTACATCAGTTGGCCTGTTCTAGAAT Chrysolophus_amherstiae CATAGCTCTTTTCCAAGTCCTGTGCTACATCAGTTGGCCTGTTATAGAAT Gallus_gallus TATAGCTCTTTTACAAGTCCTGTGCTTCACTGGTTGCCCTGTTCTAGAAT Lophophorus_lhuysii CGTAGCTCTTTCCCAAGTCCTGTGCTACATCAGTTGGCCTATTCTAGAAT Meleagris_gallopavo CACAGCTCTTTTCCAAG-CTTGTGCTACATCAGTTGGCCTATTCTAGAAT Phasianus_colchicus CATAGTTCTTTTCCAAGTCCTGTGCTACATCAGTTGGCCTGTTCTAGAAC Pucrasia_macrolopha CATAGCTCTTTTCCAAGTCCTGTGCTACATCAGTTGGCCTATTCTAGAAT Syrmaticus_reevesii CATAGCTCTTTTCCAAGTCCTGTGCTACATCAGTTGGCCTGTTCTAGAAC Tetraophasis_szechenyii CGTAGCTCTTTTCCAAGTCCTGTGCTACATCAGTTGGCCTATTCTAGAAT Tragopan_temminckii CACAGCTCTTTTCCAAGTCCTGTGCTACATCAGTTGGTCTATTCTAGAAC Arborophila_ardens GGGAAGCAATGAAAGTTCAGTTTTCAGGCCTTCAAGTTCACTTTCTAGCT Arborophila_brunneopectus GGGAAGCAATGAAAGTTCAGTTTTCAGGCCTTCAAGTTCACTTTCTAGCT Anas_platyrhynchos TTTAAGCACTTGAAGTTCAATTTCCAGGCCTTCAAGTTCAGTTTCTGGCT Arborophila_rufipectus GGGAAGCAATGAAAGTTCAGTTTTCAGGCCTTCAAGTTCACTTTCTAGCC Chrysolophus_amherstiae GGGAAGCGATAAAAGTTCAATTTTCAAGCCTTCAAGTTCACTTTCTAGCT Gallus_gallus GGGAAGTGATAGAAGCTCAATTTTCAGGCCTTCACATTCATTTTCTAGCT Lophophorus_lhuysii GGGAAGAGATGAAAGTTCAATTTTCAGGCCTTCAAGTTCACTTTCTAGCT Meleagris_gallopavo GGGAAGTGATGAAAGTT-AATTTTCAGGCCTTCAAGTTCACTTTCTAGCT Phasianus_colchicus GGGAAGCGATAAAAGTTCAATTTTCAGGCCTTCAAGTTCACTTTCTT--- Pucrasia_macrolopha GGGAAGCGATGAAAGCTCAGTTTTCAGGCCTTCAAGTTCACTTTCTAGCT Syrmaticus_reevesii GGGAAGCGATAAAAGTTCAATTTTCAGGCCTTCGAGTTCACTTTCTAGCT Tetraophasis_szechenyii GGGAAGCGATGAAAGTTCAATTTTCAGGCCTTCAAGTTCACTTTCTAGCT Tragopan_temminckii GGGAAGCGATAAAAGCTCAATTTTCAGGCCTTCA-GTTCACTTTCTAGCT Arborophila_ardens GTGCAACAAGTTAATCTGAGACTTTTTTAACCAAAGTCGTGATTCCTCTT Arborophila_brunneopectus CTGCAACAAGTTAATCTGAGACTTTTTTAACCAAAGTTGTGATTCCTCTT Anas_platyrhynchos CTGCAACAAGTTAATCTGAGACTTTTTAAGCAAATCTCTTGATTCCTCTG Arborophila_rufipectus CTGCAACAAGTTAATCTGAGACTTTTTTAACCAAAGTCGTGATTCCTCTT Chrysolophus_amherstiae CTGAAACAAGTTAATCTGAGACTTTTTAAAGCAAAGTC--AATTCCTCTT Gallus_gallus CTGCAACAAGTTAATCTGAGACTTTTTTAAGCAAAGTCTCAATTCCTCTT Lophophorus_lhuysii CTGCAACAAGTTAATCTGAGACTTCTTTAAGCAAAGTCTCAATTCCTCTT Meleagris_gallopavo CCG---------------AAACTTCTTTAAGCAAAGTCTCAATTCCTGTT Phasianus_colchicus --------AGTTAATCTGAGACTTTTTAAAGCAAAGTC--AAT-CCTCTT Pucrasia_macrolopha CTGAAACAAGTTAATTTGAGACTTTTTAAAGCAAAGTCTAAATTCCTCTT Syrmaticus_reevesii CTGAAACAAGTTAATCTGAGACTTTTTAAAGCAAAGTC--AATTCCTCTT Tetraophasis_szechenyii CTA------GTTAATCTGAGACTTCTTTAAGCAAAGTCTCAATTCCTCTT Tragopan_temminckii CTGCAACAAGTTAATCTGAGACTTCTTTAAGCAAAGTCTCAATTCCTCTT Arborophila_ardens CAAGAGACAGACAGTGATCCTTTCTATCTAAAGAGAAGCCTTAAGATGAG Arborophila_brunneopectus CAAGAGACAGACAGTGATCCTTTCTATCTAAAGAGAAGCCTTAAGATGAG Anas_platyrhynchos CAAGACACAGATAACGATCCTTTCTATTTAAACAGGAGGTTTAAAGATAG Arborophila_rufipectus CAAGAGACAGACAGTGATCCTTTCTATCTAAACAGAAGTCTTAAAGTGAG Chrysolophus_amherstiae CAAGAGACAGACAATGATCCTTTCTATTTAAACAAAAGCCTTAAGATGAG Gallus_gallus CAAGAGACAGACAATGATCCTTCCTATTTAAACAGAAGCCTTAAAGTGAG Lophophorus_lhuysii CAAGAGACAAACAATGATCCTTTCTATTTAGACAGAAGCCTAAGCAAGAG Meleagris_gallopavo CAAGAGACAGACAACGATCCTTTCTATTTAGACAGAAGTCTTAAAGTGAG Phasianus_colchicus CAAGAGACAGACAATGACCTTCTGTATTTAAACAAAAGCCTTAAGATGAG Pucrasia_macrolopha CGAGAGACAGACCATGATCCTTTCTATTTAAACAAAAGCCTAAGAAAGAG Syrmaticus_reevesii CAAGAGACAGACAATGATCCTTTCTATTTAAACAAAAGCCTTAAGATGAG Tetraophasis_szechenyii CAAGAGACAGACAATGATCCTTTCTATTCAGACAGAAGCCTTAAGATGAG Tragopan_temminckii CAAGAGACAGACAATGATCCTTTCTATTTAGACAGAAGCCTTAAGACGAG Arborophila_ardens ACCCTTTCCATCCCCCGAT-CTCCAGCTTTTCGCTATTCCAAACATTCTG Arborophila_brunneopectus ACCCTTTCCATCCCCCGATGCTCCAGCTTTTCGCTATTCCAAACATTCTG Anas_platyrhynchos ACCCTTCCCATC--GGCTTGCTCCAGCTTTTCGCTATTCCAAACATTTCG Arborophila_rufipectus ACCCTTTCCATCCCCCGATGCTCCAGCTTTTCGCTATTCCAAACATTCTG Chrysolophus_amherstiae ACCTTTTCCATCCCCCCGTGCTCCAGCTTTTCGCTATTCCAAACATTCTG Gallus_gallus ACCCTTTCCATCCAGGATTGCTCCAGCTTTTCGCTATTCCAAACATTCTG Lophophorus_lhuysii ACCCTTTCCATCCCCCGATGCTCCAGCTTTTCGCTATTCCAAACATTCTG Meleagris_gallopavo ACCTTTTCCATCCACGATTGCTCCAGCTTTTCGCTATTCCAAACATTCTG Phasianus_colchicus ACCTTTTCCATCCCCCCGTGCTCCAGCTTTTCGCTATTCCAAAC-TTCTG Pucrasia_macrolopha ACCTTTTCCATCCCCCGATGCTCCAGCTTTTCGCTATTCCAAACATTCTG Syrmaticus_reevesii ACCTTTTCCATCCCCCCGTGCTCCAGCTTTTCGCTATTCCAAACATTCTG Tetraophasis_szechenyii ACCCTTTCCATCCCCCGATGCTCCAGCTTTTCGCTATTCCAAACATTCTG Tragopan_temminckii ACCCTTCCCATCCCCCCGTGCTCCAGCTTTTCGCTATTCCAAACATTCTG Arborophila_ardens CAGGCCCCTCCTCTTCTGTTGCTCGAGTTTTAGCCCTTTGTGTACTTCGC Arborophila_brunneopectus CAGGCCCCTCCTCTTCTGTTGCTCGAGTTTTAGCCCTTTGTGTACTTCGC Anas_platyrhynchos CAGGCCCCTCCTCTGCTGCTGCTCAAGTTTTAGCCCTTTGTGCACTCGGC Arborophila_rufipectus CAGGCCCCTCCTCTTCTGTTGCTCGAGTTTTAGCCCTTTGTGTACTTCGC Chrysolophus_amherstiae CAGGCCCCCCCTCTTCTGCTGCTCAAGTTTTAGCCCTTTGTGTACTTCGC Gallus_gallus CAGGCCCCTCCTCTTCTGCTGCTCAAGTTTTAGCCCTTTGTGTACTTCGC Lophophorus_lhuysii CAGGCCCCTCCTCTTCTGCTGCTCAAGTTTTAGCCCTTTGTGTACTTCGC Meleagris_gallopavo CAGGCCCCTCCTCTTCTGCTGCTTAAGTTTTAGCCCTTTGTGTACTTCGC Phasianus_colchicus CAGGCCCCTCCTCTTCTACTGCTCAAGTTTTAGCCCTTTGTGTACTTCGC Pucrasia_macrolopha CAGGCCCCTCCTCTACTGCTGCTCAAGTTTTAGCCCTTTGTGTACTTCGC Syrmaticus_reevesii CAGGCCCCTCCTCTTCTACTGCTCAAGTTTTAGCCCTTTGTGTACTTCGC Tetraophasis_szechenyii CAGGCCCCTCCTCTTCTGCTGCTCAAGTTTTAGCCCTTTGTGTACTTCGC Tragopan_temminckii CAGGCCCCTCCTCTTCTGCTGCTCAAGTTTTAGCCCTTTGTGTACTTCGC Arborophila_ardens GCTCGCAGACTTTTCCAGTTCCATTCCTCAGATTTTCCTTGGTCTCAGCT Arborophila_brunneopectus GCTCGCAGACTTTTCCAGTTCCATTCCTCAGATTTTCCTTGGTCTCAGCT Anas_platyrhynchos GCTCGCAGGCTTTTCCAGTTCCATTCCTCAGATTTTCCTTGGTCTCAACT Arborophila_rufipectus GCTCGCAGACTTTTCCAGTTCCATTCCTCAGATTTTCCTTGGTCTCAGCT Chrysolophus_amherstiae GCTCACAGACTTTTCCAGTTCCATTCCTCAGATTTTCCTTGGTCTCAGCT Gallus_gallus GCTCGCAGACTTTTCCAGTTCCATTCCTCAGATTTTCCTTGGTCTCAGCT Lophophorus_lhuysii GCTCACAGACTTTTCCAGTTCCATTCCTCAGATTTTCCTTGGTCTCAGCT Meleagris_gallopavo GCTCGCAGACTTTTCCAGTTCCATTCCTCAGATTTTCCTTGGTCTCAGCT Phasianus_colchicus GCTCACAGACTTTTCCAGTTCCATTCCTCAGATTTTCCTTGGTCTCAGCT Pucrasia_macrolopha GCTCACAGACTTTTCCAGTTCCATTCCTCAGATTTTCCTTGGTCTCAGCT Syrmaticus_reevesii GCTCACAGACTTTTCCAGTTCCATTCCTCAGATTTTCCTTGGTCTCAGCT Tetraophasis_szechenyii TCTCACAGACTTTTCCAGTTCCATTCCTCAGATTTTCCTTGGTCTCAGCT Tragopan_temminckii GCTCACAGACTTTTCCAGTTCCATTCCTCAGATTTTCCTTGATCTCAGCT Arborophila_ardens TTCAGCCCAAATTTCCACATGTCTGGGCACGCATGCCGAGCATCGCAGCT Arborophila_brunneopectus TTCAGCCCAAATTTCCACATGTCTGGGCACGCATGCCGAGCATCGCAGCT Anas_platyrhynchos TTCAACTGAAATTTCCACGTGTCCAGGCGGGCTTGCTCAACTTTCCAGCT Arborophila_rufipectus TTCAGCCCAAATTTCCACATGTCTGGGCACGCATGCCGAGCATCGCAGCT Chrysolophus_amherstiae TTCAGCCCATATTTCCACGTGTCCAGGCAGGCATGCTGAGCATCGCAGCT Gallus_gallus TTCAGCCCAAATTTCCACGTGTCTGGGCAGGCATGCTGAGCATCGCAGCT Lophophorus_lhuysii TTCAGCCCATGTTTCCACGTGTCCAGGCAGGCATGCTGAGCATCGCAGCT Meleagris_gallopavo TTCAGCCCATATTTCCACGTGTCCAGGCAGGCATGCTGAGCATCGCAGCT Phasianus_colchicus TTCAGCCCATATTTCCACATGTCCAGGCAGGCACGCTGAGCATCGCAGCT Pucrasia_macrolopha TTCAGCCCATATTTCCACGTGTCCAGGCAGGCATGCTGAGCATCGCGGCT Syrmaticus_reevesii TTCAGCCCATATTTCCACGTGTCCAGGCAGGCATGCCGAGCATCGCAGCT Tetraophasis_szechenyii TTCAGCCCATATTTCCACGTGTCCAGGCAGGCATGCTGAGCATCGCAGCT Tragopan_temminckii TTCAGCCCATATTTCCACGTGTCCAGGCAGGCATGCTGAGCATCGCAGCT Arborophila_ardens CCCACTGTGCCTTACGGGTGCTTCCACCTGCTGGCTGCTCAGCCTGGCCT Arborophila_brunneopectus CCCACTGTGCCTTACGGGTGCTTCCACCTGCTGGCTGCTCAGCCTGGCCT Anas_platyrhynchos CGCACCGTGCCTTATGGCTGACTCCGCCTGCTGGCTGCTCAGCCCGGCAT Arborophila_rufipectus CCCACTGTGCCTTATGGGTGCCTCCACCTGCTGGCTGCTCAGCCCGGCCT Chrysolophus_amherstiae CCCGCTGTGCCTTACGGGTGCCTCCACCTGCTGGCTGCTCGGCCTGGCTT Gallus_gallus CCCACTGTGCCTTACGGGTGCCTCCACCTGCTGGCTGCTCGGCCCGGCTT Lophophorus_lhuysii CCCGCTGTGCTTTACGGGTGCCTCCACCTGCTGGCTGCTTGGCC-GGCTT Meleagris_gallopavo CCCGCTGTGCCTTACGGGTGCCTCCACCTGCTGGCTGCTCGGCCTGGCTT Phasianus_colchicus TCCGCTGTGCCTTACGGGTGCCTCCACCTGCTGGCTGCTCAGCCTGGCTT Pucrasia_macrolopha CCCGCTGTGCCTTACGGGTGCCTCCACCTTCTGGCTGCTCGGCC------ Syrmaticus_reevesii CCTGCTGTGCCTTACGGGTGCCTCCACCTGCTGGCTGCTCGGCCTGGCTT Tetraophasis_szechenyii CCCGCTGTGCCTTACGGGTGCCTCCACCTGCTGGCTGCTCGGCCCGGCTT Tragopan_temminckii CCCTCTGTGCCTTACGGGTGCCTCCACCTGCTGGCTGCTCGGCCCGGCTT Arborophila_ardens TCCTACTGCAGGGACCGTGGGGTGAGCTGCTCACCCCAGTTTATAGGGAA Arborophila_brunneopectus TCCTACTGCAGGGACCGTGGGGTGAGCTGCTCACCCCAGTTTATAGGGAA Anas_platyrhynchos T------------------------------------------------- Arborophila_rufipectus TCCTACTGCAGAGACCATGGGGTGAGCTGCTCACCCCAGTTTATAGGGAA Chrysolophus_amherstiae TCCTACAGCAGGGACCATGGGGTGAGCTGCTCACCCCACTTTATAGGAAA Gallus_gallus TCCTACTGCAGGGACCGCGGGGTGAGCTGCTCACTCCACTTTGTAGAGAA Lophophorus_lhuysii TCCTACAGCAGGGACCATGGGGTGAGCTGCTCACCCCACTTTATAGGGAA Meleagris_gallopavo TCCTACAGCAGGGACTGTGGGGTGAGCTGCTCACCCCACTTTATAGGGAA Phasianus_colchicus TCCTACAGCAGGGACCATGGGGTGAGCTGCTCACCCCACTTTATAGGAAA Pucrasia_macrolopha ---TACAGCAGGGACCATGGGATGAGCTGCTCACCCCACTTTATAGGGAA Syrmaticus_reevesii TCCTACAGCAGGGACCATGGGGTGAGCTGCTCACTCCACTTTATAGGAAA Tetraophasis_szechenyii TCCAACAGCAGGGACCGTGGGGTGAGCTGCTCACCCTACTTTATAGGGAA Tragopan_temminckii TCCTACAGCAGGGACCATGGGGTGAGCTGCTCACCCCACTTTATAGGGAA Arborophila_ardens ATCCTCAACACATGCCACATCTGCACAAATCCCAAGGGTTTGC--AAGAA Arborophila_brunneopectus ATCCTCAAGACATGCCACATCTGCACAAATCCCAAGGGTTTGC--AAGAA Anas_platyrhynchos -------------GCCACATCTGCACTGATCCTCAGAGTTTGCCTAACAA Arborophila_rufipectus ATCATCAATACATGCCGCATCTGCACAAATCCTAAGGGTTTGC--AAGAA Chrysolophus_amherstiae ATCCCCCATAGACGCCACATCTACACAGATCCTAAGAGTTTGCCTAAAAA Gallus_gallus ATCCCCCATAAATGCCACGTCTGCACAAATCCTAAGAGTTTGCCTAAAAA Lophophorus_lhuysii ATCCCCCATAGATGCCACATCTACACAAATCCTAAGAGTTTGCCTAAAAA Meleagris_gallopavo ATCCTCCATAGATGCCACATCTACACAAATCCTAAGAGTTTGCCTAAAAA Phasianus_colchicus ATCCCCCTTAGATGCCATATCTACACAGATCCTAAGAGTTTGCCTAAAAA Pucrasia_macrolopha ATCCCCCATACATGCCATATCTACACAAATCCTAAGAATTTGCCTAAAAA Syrmaticus_reevesii ATCCCCCATAGATGCCACATCTACACAGATCCTAAGAGTTTGCCTAAAAA Tetraophasis_szechenyii ATCCCCCATAGATGCCACATCTACACAAATCCTAAGAGTTTGCCTAAAAA Tragopan_temminckii ATCCCCCATAGATGCCACATCTACACACATCCTAAGAGTTTGCCTAAAAA Arborophila_ardens CCTGATGTGTGCATGAGCACAGAGCCAGCTGGGCCGAGAGAACCGACAGT Arborophila_brunneopectus CCTGAGGTGTGCATGAGCACAGGGCCAGCTGGGCCGAGAGAACCAACAGT Anas_platyrhynchos AATGATGTGTGCAGGAGCTCGGAGCCAGCTGGGTGAAGAGGACCGAATGT Arborophila_rufipectus CCTGATGTCTGCATGAGCACAGAGCCAGCTGGGCCGAGAGAACCGATGGT Chrysolophus_amherstiae CCTGATGTGTGCATGAGTGCAGGGCCAGCTGGGATGAGATAACCGATGGT Gallus_gallus CCTGATGTGTGCACGAGGCCAGAGCCAGCTGGGACGAGAGAACTGACAGT Lophophorus_lhuysii CCTGATGTGTGCACGAATGCAGAGCCAGCTGGGATGGGATAACCGATGGT Meleagris_gallopavo CCTGATGTGTGCACAAATGCAGAGCCAGCTGGGATGAGATAACCGATGGT Phasianus_colchicus CCTGATGTGTGCATGAGTGCAGAGCCAGCTGGGATGAGATAACCGATGGT Pucrasia_macrolopha CTTGATGCGTGCACGAATGCAGAGCCAGCTGGGATGAGATAACCGATGGT Syrmaticus_reevesii CCTGATGTGTGCATGAGTGCAGAGCCAGCTGGGATGAGATAACCGATGGT Tetraophasis_szechenyii CCCGATGTGTGCACAAATGCAGAGCCAGCTGGGATGGGATAACCGATGGT Tragopan_temminckii TCTGATGTGTGCACGAATGCAGAGCCAGCTGGGATGAGATAACCGATGGT Arborophila_ardens CAGAGCACGGAGAAATCCTCTCCTTGTGACTCAGCACGGCACTGAGGCTC Arborophila_brunneopectus CAGAGCACGGAGAAATCCTCTCCTTGTGACTCAGCACGGCACTGAGGCTC Anas_platyrhynchos CAGAGCACAAAGAAATCCTTATCTCGTGATTCAGCGTGACATTTAGGTGC Arborophila_rufipectus CAGAGCACGGAGAAATCCTCTCCTTGTGACTCAGCACGGCATCGAGGCTC Chrysolophus_amherstiae CAGAGCACAGAGAAATCCTCCCCTTGTGACTCAGTGCTGCATTGAGGCTC Gallus_gallus GAGAGCACAGAGAAATCCTCTCCTTGTGACTCAGCGTGGCATTGAGGTTC Lophophorus_lhuysii CAGAGCACAGAGAAATCCTCCCCTTGTGACTCAGCGCTGCACTGAGGCTC Meleagris_gallopavo CAGAGCACAGAGAAGTCCTCCCCTTGTGACTCAGCGCTGCATTGAGGCTC Phasianus_colchicus CAGAGCACAGAGAAATCCTCCCCTTGTGACTCAGTGCTGCGTTGAGGATC Pucrasia_macrolopha CAGAGCACAGAGAAATCCTCCCCTTGTGACTCAGCGCTGCATTGAGGCTC Syrmaticus_reevesii CAGAGCACAGAGAAATCCTCCCCTTGTGACTCAGTGCTGCACTGAAGCTC Tetraophasis_szechenyii CAGAGCACAGAGAAATCCTCCCCTTGTGACTCAGTGCTGCATTGAGGCTC Tragopan_temminckii CAGAGCACAGAGAAGTCCTCCCCTTGTGACTCAGCGCTGCATTGAGGCTC Arborophila_ardens T-GCTAA--CATCAGCCCAGGAAATATCACTGCAGTCCTAGCAGCACACT Arborophila_brunneopectus T-GCTAA--CCTCAGCCCAGGAAATATCACTGCAGTCCTAGCATGAGACT Anas_platyrhynchos TTCCCTAACCTTCAGCCCAGGAAATATCATGGCAATCATTGCTTTGACCA Arborophila_rufipectus T-GCTTAACCTTCAGCCCAGGAAATATCACTGCAGTCCTGGGATCAGACT Chrysolophus_amherstiae TTGCTTAACCTTCAGCCCAGGAAATATCAGTGCAGCCCGGGTTATAGACA Gallus_gallus TTGCTTAACCTTCAGCCCAGGAAATATCACTGCAGTCCCTGTTTTGATCA Lophophorus_lhuysii TTGCTTAACCTTCAGCCCAGGAAATATCACTGCAGTCCTGGTTTTGACCA Meleagris_gallopavo TTGCTTAACCTTCAGCCCAGGAAATATCACTGCAGTCCCCGTATAGACCA Phasianus_colchicus TTGCTTAACCTTCAGCCCAGGAAATATCACTGCAGCCGGGGTTTTGACCA Pucrasia_macrolopha TTACTTAACCTTCAGCCCAGGAAATATCACTGCAGTCCTGGTTTAGACCA Syrmaticus_reevesii TTGCTTAACCCTCAGCCCAGGAAATATCGCTGCAGTCCGGGTTTTGACCA Tetraophasis_szechenyii TTGCTTAACCTTCAGCCCAGGAAATATCACTGCAGTCCGGGTTTTGACCA Tragopan_temminckii TTGCTTAACCTTCAGCCCAGGAAATATCGCTGCAGTCCAGGTTTTGATCA Arborophila_ardens T-TACCT-TCAATTCTACTATTTATCATTGAGTGCTGTCCACTAAGAATG Arborophila_brunneopectus TATACCTATAAGTTTTACTATTTATCATTGAGTGCTGTCCACTAAGAATG Anas_platyrhynchos TTTATTTTCAAATTCTAATAATTATCATTGAGTGGTGCTCACCAAA---- Arborophila_rufipectus TATACCTATCAGTTCTACTATTTATCATTGAGTGTTGTCCACTAAGAATG Chrysolophus_amherstiae TTTACCTCCAAATTCTAATATTTATCATTGAGTGTTCTCCACTAAGAATG Gallus_gallus TTTACCTTCAAATTCTAATATTTATTGTTGAGTGTTGTACACTAAGAATG Lophophorus_lhuysii TTCACCTCCAAATTCTAATAGTTATCATTGAGTGTTCTCCGCTAAGAATG Meleagris_gallopavo TTTACCTCCAAATTCTAATATTTATCATTGAGTGTTCTCCACTAAGAATG Phasianus_colchicus TTTACCTCCAAATTCTAATATTTATCATTGAGTGTTCTCCACTAAGAATG Pucrasia_macrolopha TTTACCTCCAAATTCTAATATTTATCATTGAGTGTTCTTCGCTAAGAATG Syrmaticus_reevesii TTTACCTCCAAATTCTAATATTTATCATCGAGTGTTCTCCACTAAGAATG Tetraophasis_szechenyii TTTACCTCCAAATTCTAATATTTATCATTGAGTGTTCTCCACTAAGAATG Tragopan_temminckii TTTACCTCCAAATTCTAATATTCATCATTGAGTGTTCTCCACTAAGAATG Arborophila_ardens AAGTTCATTTATCGGAACACCTCTGGTTGTACTGTTTCACAGTCTT---C Arborophila_brunneopectus AAGTTCATTTATCGGAACACCTCTGGTTGTACTGTTTCACAGTCTT---C Anas_platyrhynchos --------------------CTCTAGATGTATTGTTTCACAGTCTTTGTC Arborophila_rufipectus AAGTTCATTTATCGGAACACCTCTGGTTCTACTGTTTCACAGTCTT---C Chrysolophus_amherstiae AAGTTAATTTATTAGAACACTTCTGGTTGTATTGTTTCACAGTCTTTTTT Gallus_gallus AAGTTAATTTATTAGAACACCTCTGGTTGTATTGTTTCACAGTCTTTTTC Lophophorus_lhuysii AAGTTAATTTATTAGAACACCTCCGGTTGTACAGTTTCACAGTCTTTTTC Meleagris_gallopavo AAGTTAATTTATTAGGACACCTCTGGTTGTATTGCTTCACAATCTTTTTC Phasianus_colchicus AAGTTAATTTATTAGAACACTTCTGGTTGTATTGTTTCACAGTCTTTTTC Pucrasia_macrolopha AAGTAAATTTATTAGAACACCTCTGGTTGTATTGTTTCACAGTCTTTTTC Syrmaticus_reevesii AAGTTAATTTATTAGAACACTTCCGGTTGTATTGTTTCACAGTCTTTTTC Tetraophasis_szechenyii AAGTTAATTTATTAGAACACCTCTGGTTGTATTGTTTCACAGTCTTTTTC Tragopan_temminckii AAGTTAATTTATTAGAACACCTCTGGTTGTATTGTTTCACAGTCTTTTTT Arborophila_ardens TTGAGGCCATTTTTGCAGTTTTTATAAACAAGTGAGTGTTAAAACAGACC Arborophila_brunneopectus TTGAGGCCATTTTTGCAGTTTTTATAAACAAGTGAGTGTTAAAACAGACC Anas_platyrhynchos TTGCTGACATATTT--------TATAAATAGGTGAGTGTTAAAACAGACC Arborophila_rufipectus TTGAGGCCATTTTTGCAGTTTTTATAAACAAGTGAGTGTTAAAACAGACC Chrysolophus_amherstiae TTGTGGACATTTTTGCAATTTTTATGAACAGGTGAGTGTTAAAACAGACC Gallus_gallus CTGTGGACATTTTTGCAGTTTTTATAAACAGGTGAGTATTAAAACAGACC Lophophorus_lhuysii TTGTGGACATTTTTGCAGTTTTTATGAACAGGCAAGTGTTAAAACAGACC Meleagris_gallopavo TTGTGGACATTTTTGCAGTTTTTATGAACAGGTGAGTGTTAAAACAGACC Phasianus_colchicus TTGTGGACATTTTTGCAATTTTTATGAACAGGTGAGTGTTAAAACAGACC Pucrasia_macrolopha TTGTGGACTTTTTTGCAATTTTTATGAACAGGTGAGTGTTAAAACAGACC Syrmaticus_reevesii TTGTGGACATTTTTGCGATTTTTATGAACAGGTGAGTGTTAAAACAGACC Tetraophasis_szechenyii TTGTGGACATTTTTGCAGTTTTTATGAACAGGTGAGTGTTAAAACAGACC Tragopan_temminckii TTGTGGACATTTTTGCAATTTTTATGAACAGGTGAGTGTTAAAACAGACC Arborophila_ardens TTGTTGAAAAGTTGTCTACAAATCCTGGCCCAATGTTATAAGAGCGCTCC Arborophila_brunneopectus TTGTTGAAAAGTTGTCTACAAATCCTGGCCCAATGTTATAAGAGGGGTTC Anas_platyrhynchos TTGTTGAAGAGCTGTCTGCAAATCCTGGCCCTATGTTATAAGACTGGGGG Arborophila_rufipectus TTGTTGAAAAGTTGTCTACAAATCCTGGCCTA-TGTTATAAGAGCGCTCC Chrysolophus_amherstiae TTGTTGAAAAGCTGTCGACAAATCCTGGCCCTATGTTATAAGAGCGCTCC Gallus_gallus TTGTTGAAATATTGCGTACAAATCCTGGCCCTATGTTATAAGAGCGCTCC Lophophorus_lhuysii TTGTTGAAAAGTTGTCTACAAATCCTGGCCCTATGTTATAAGAACGTGCA Meleagris_gallopavo TTGTTGAAAAGTTGTCTACAAATCCTGGCCTATGGTTATAAGAGTGCTCC Phasianus_colchicus TTGTTGAAAAGCTGTCGACAAATCCTGGCCCTATGTTATAAGAGGGGCTC Pucrasia_macrolopha TTGTTGAAAAGTTGTCTACAAATCCTGGCCCTATGTTATAAGAGTGCTCC Syrmaticus_reevesii TTGTTGAAAAGTTGCCGACAAATCCTGGCC-TATGTTATAAGAGCGCTCC Tetraophasis_szechenyii TTGTAGAAAAGCTGTCTGCAAATCCTGGCCCTATGTTATAAGAACGTGCA Tragopan_temminckii TTGTTGAAAAGTTGTCTACAAATCCTGGCCCTACGTTATAAGAGCGCTCC Arborophila_ardens GCTCTTTGCTGGGCATCAGGAGCAGCTCCCAGCCCCATGGCTCTGCTCTG Arborophila_brunneopectus GCTTCTTGCTGGGCATCGGGAGCAGCTCCTGGCCCCATGGCTCTGCTCTG Anas_platyrhynchos AAAGCTTGCGGGGCACTGGGAGCAGCTCCTGGCCCCGTAGCTCTGCTCTG Arborophila_rufipectus GCTCCTTGCTGGGCATCGGGAAC---TCCTGGCCCCATGGCTCTGCTCTG Chrysolophus_amherstiae GCTCTTTGCTGGGCATCAGGAGCAGCTCCCAGCCCCATGGCTCTGCTCTG Gallus_gallus GCTCCTCGCTGGGCATCAGGAGCAGCTCCCAGCCCCATAGCTCTGCTCTG Lophophorus_lhuysii TGGCTTTCCTGTGAC-TATACGT-TGTCTTTTTG-------TGTCCCTTA Meleagris_gallopavo ACACTTTGCTGGGCATCAGGAGCAGCTCCCAGCCCTGTGGCTCTGCTCTG Phasianus_colchicus CGGACTCTCTGTGAC-TATGTGT-TGTCTTTTCCCCGTGGTTATGGTCTG Pucrasia_macrolopha GTTCTTTGCTGGGCATCAGGAGCAGCTCCCAGCCCTGTGGCTCTGCTCTG Syrmaticus_reevesii GCTCTTTGCTGGGCATCAGGAGCAGCTCCCAGCCCCGTGGCTCTGCTCTG Tetraophasis_szechenyii TGGCTTTCCTGTGGCGTATACCCATGCCCTTGGC-------TCTGCTTTA Tragopan_temminckii GCTCTTTGCTGGGCATCAGGAGCAGCTCCCAGCCCCATGGCTCTGCACTG Arborophila_ardens TGTCAGCTTGTCCACATCAAGCACAGCTGCTCCAGGGTCCCGTGTGGTTC Arborophila_brunneopectus TGTCAGCCTGTCCACGTCAAGCACAGCTGCTCCAGGGTCCCGTGGGGTTC Anas_platyrhynchos TGTCAGCCTGTCCACGTAAAACCCAGCTGCTCCAGAGCCCTGTAGGTTTC Arborophila_rufipectus TGTCAGCCTGTCCACGTCAAGCACAGCTGCTCCAGGGTCCCGTGGGGTTC Chrysolophus_amherstiae TGTCAGCTTGTCCACATCAAGCACAGCTGCTCCAGGGTCCCGTGTGGTTC Gallus_gallus TGTCAGCCTGTCCACATCAAGCCCAGCTGCTCCAGGGTCCCGTGTGGTTC Lophophorus_lhuysii TGGAAGCCTGCCCACATCAAGCACAGCTGCTCCAGGGTCCCGTGTGGTTC Meleagris_gallopavo TGTCAGCCTGTCCACATCAAGCACAGCTGCTCCAGGGTCCCATGTGGTTC Phasianus_colchicus TGTCAGCTTGTCCACATCAAGCACAGCTGCTCCAGGGTCCCATGTGGTTC Pucrasia_macrolopha TGTCAGCCTGCCCACATCAAGCACAGCTGCTCCAGGGTCCCGTGTGGTTC Syrmaticus_reevesii TGTCAGCTTGTCCACATCAAGCACAGCTGCTCCAGGGTCCCGTGTGATTC Tetraophasis_szechenyii TGGCAGCCTGTCCACATCAAGCACAGCTGCTTCAGGGTCCCGTGTGGTTC Tragopan_temminckii TGTCAGCCTGTCCACATCAAGCACAGCTGCTCCCAGGTCCCGTGTGCTTC Arborophila_ardens TTCTTTTAGTGTGGGTGCTTTGCTTTTT--------TCACCCCATTTTCT Arborophila_brunneopectus TTGTTTTGCTGTTGGTGCTTTGCTTTTTGCATTTTTTCACCCCGTTTTCT Anas_platyrhynchos TTGTCTTTGCGTTTGGGCTTTGCTTTTTGCATTT--CCCCCTCATTTTCT Arborophila_rufipectus TTGTTTTGCTGCTGGTGCTTTGCTTTTTGCATTTTTTCACCCCGTTTTCT Chrysolophus_amherstiae TTCTTTTAGTGTGGGTGCTTTGCTTTTT--------TCACCCCATTTTCT Gallus_gallus TTGTTGTGGTGTTGGTGCTTTGCTTTTTGTGTTTTTTCACCCCATTTTCT Lophophorus_lhuysii TTGTTTTGGTGTTGGTGCTTTGCTTTTTGCATTTTTTCACCCCATTTTCT Meleagris_gallopavo TTGTTTTAGTGTTGGCGCTTTGCTTTTTGCGTTTTTTCACCCCATTTTCT Phasianus_colchicus TTGTTTTGGTGTTGGTGCTTTGCTTTTT--------TCACCCCATTTTCT Pucrasia_macrolopha TTGTTTTAGTGTTGGTGCTTTGCTTCTTACATTTTTTCACTCCATTTTCT Syrmaticus_reevesii TTCTTTTAGTGTTGGTGCTTTGCTTTTTGCATTTTTTCACCCCATTTTCT Tetraophasis_szechenyii TTGTTTTGGTGTTGGTGCTTTGCTTTTTGTATTTTTTCACCCCATTTTCT Tragopan_temminckii TTGTTTTGGTGTTGGTGCTTTGCTTTTTGCGTTTTTTCACCTCATTTTCT Arborophila_ardens GATCCTGTTAACTTTTTGGCAAGTATCAGTTTCTATTCCAC--GTCACTA Arborophila_brunneopectus GGTCCTGTTAACTTTTTTGCAAGTGTCAGTTTCTATTCCACACGTCACTG Anas_platyrhynchos GGTCTTGTTAACGTTTT--------GCTGTCTTTGGAGCAG-CCCAGCTG Arborophila_rufipectus GGTCCTGTTAACTTTTTTGCAAGTGTCAGTTTCTATTTCGCACGTCACTG Chrysolophus_amherstiae GATCCTGTTAACTTTTTGGCAAGTATCAGTTTCTATTCCAC--GTCACTA Gallus_gallus GGTCCTGTTAACTTTTTTGCGAGTATCACTTTCTATTCCACGTGTCACTG Lophophorus_lhuysii GGTCCTGTTAACTTTTTTGCAAGTATCAGTTTCTGTTCCACATGTCACTG Meleagris_gallopavo GGTCCTGTTAACTTTTTTGCAAGTATCTGTTTCTATTCCACATGTCACTG Phasianus_colchicus GATCCTGTTAACTTTTTGGCAAGTATCAGTTTCTATTCCAC--GTCACTA Pucrasia_macrolopha GATCCTGTTAACTTTTTTGCAAGTATCAGTTTCTATTCCACATGTCACTG Syrmaticus_reevesii GATCCTGTTAACTTTTTGGCAAGTATCAGTTTCTATTCCAC--GTCACTA Tetraophasis_szechenyii GGTCCTGTTAACTTTTTGGCAAGTATCAGTTTCTATTCCACACGTCACTG Tragopan_temminckii GGTCCTGTTAACTTTTTTGCAAGCGTCAGTTTCTATTCCACATGTCACTG Arborophila_ardens AGCTCACATCCCTGACCCCATAACCTGCCCCACCCCAAGGCACATTTCCA Arborophila_brunneopectus AGGGCACATCCCTGACCCCTTCACCCGTCCCACCCCGAGGCACATTTCCA Anas_platyrhynchos AGTCCAAGGTGCTAATTTTAGGGGGTGGTTCTATCAGCCCTGCACACGCA Arborophila_rufipectus AGGGCACATCTCTGACCCCTTCACCCGTCCCACCCCGAGGCACATTTCCA Chrysolophus_amherstiae AGCTCACATCCCTGACCCCATAACCTGCCCCACCCCAAGGCACATTTCCA Gallus_gallus AGCTCACATCCCTGACCCCATCACCTGTCCCACCCCGAGGCACATTTCCA Lophophorus_lhuysii AGATCACATCCCTGACCCCATCACCTGCCCCACCCCGAGGCACATTTCCA Meleagris_gallopavo AGCTCACATCTCTGACCCCATCACCTGCCCCACCCCGAGGCACATTTCCA Phasianus_colchicus AGCTCACATCCCTGACCCCATAACCTGCCCCACCCCGAGGCACATTTCCA Pucrasia_macrolopha AGCTCACATCCCTGACCCGATCACCTGCCCCACCCCGAGGCACATTTCCA Syrmaticus_reevesii AGCTCACATCCCTGGCCCCATAACCTGCCCCACCCCGAGGCACATTTCCA Tetraophasis_szechenyii AGATCACATCCCTGACCCCATCACCTGCCCCACCCCGAGGCACATTTCCA Tragopan_temminckii AGATCACATCTTTGACCCCATCACCTGCCCCACCCCGAGGCACATTTCCA Arborophila_ardens TTCACTGCATCCCAGTGGTATCCATGACTTAATGCCAGCCTTGGGGCAGC Arborophila_brunneopectus TGCACTGCATCCCGGTGGTATCCGTGACTTCATGCCAGCCTTGGGGCAGC Anas_platyrhynchos GACAAAATAAGCCAGTGGTGCCTGTGACTTAATACCAGCATTGGAGTTGT Arborophila_rufipectus TGCACTGCATCCCGGTGGTATCCATGACTTAATGCCAGCCTTGGGGCAGC Chrysolophus_amherstiae TTCACTGCATCCCAGTGGTATCCATGACTTAATGCCAGCCTTGGGGCAGC Gallus_gallus TGCACCACATCCCAGTGGTATCCATGACTTAATGCCAGCTTTGGGGCAGC Lophophorus_lhuysii TTCACTGCATCCCAGTGGTATCCATGACTTAATGCCAGCCTTGGGGCAGC Meleagris_gallopavo TTCACTGCATCCCAGTGGTATCCATGACTTAATGCCAGCCTTGGAGCAGC Phasianus_colchicus TTCACTGCATCCCAGTGGTATCCATGACTTAATGCCAGCCTTGGGGCAGC Pucrasia_macrolopha TTCACTGCATCCCAGTGCTATCCATGACTTAATGCCAGCCTTGGAGCAGC Syrmaticus_reevesii TTCACTGCATCCCAGTGGTATCCATGACTTAATGCCAGCCTTGGGGCAGC Tetraophasis_szechenyii TTCACTGCATCCCAGTGGTATCCATGACTTAATGCCAGCCTTGGGGCAGC Tragopan_temminckii TTCACTGCATCCCAGTGGTATCCATGACTTAACGCCAGTCTTGGGGCAGC Arborophila_ardens CCAGCTGGGAAACCCAAATGGTTTCAGCTCTTTT-GTGTCCCTTATGGCT Arborophila_brunneopectus CCAGCTGAGAAACCCAAATGGATTCCGCTCTTTTTGTGTCCCTTATGGCT Anas_platyrhynchos TCCGCCAAGTTCTCCC--TGGCTTCAGGTCCTGGTTTTTCCCTTATGGTT Arborophila_rufipectus CCAGCTGAGAAACCCAAATGGATTCCGCTCTTTCTGTGTCCCTTATGGCT Chrysolophus_amherstiae CCAGCTGGGAAACCCAAATGGTTTCAGCTCTTTT-GTGTCCCTTATGGCT Gallus_gallus CCAGCTGAGAAACCCAAGTGGATTCCGCTCTTTTTGTGTCCCTTATGGCT Lophophorus_lhuysii CCAGCTGGGAAACCCAAATGGTTTCAGCTCTTTTTGTTCCCCTTATGGCT Meleagris_gallopavo CCAGCTGGGAAACCCAAATGGTTTCAGCTCTTTTTGTGTCCCTTATGGCT Phasianus_colchicus CCAGCTGGGAAACCCAAATGGTTTCAGCTCTTTTTGTTCCC-TTATGGCT Pucrasia_macrolopha CCAGCTGGGAAACCCAAATGGTTTCAGCTCTTTTTGTGTCCCTTATGGCC Syrmaticus_reevesii CCAGCTGGGAAACCCAAATGGTTTCAGCTCTTTTTGTGTCCCTTATGGCT Tetraophasis_szechenyii CCAGCTGGGTTGACCAAATGGTTTCAGCTCTTTTTGTTCCCCTTATGGCT Tragopan_temminckii CCGGCTGGGAAACCCAAATGATTTCAGCTCTTTTTGTGTCCCTTATGGCT Arborophila_ardens CACTGTTGAGCAGGGATTTTTATGCACAGTGATGCCAGTCACTGCCCCAG Arborophila_brunneopectus CGCTGTTGAGCAGG-ATTTTTAAGCGCAGCGATGCCAGTGAGTGCCCCAA Anas_platyrhynchos GGCTCACAAAAAAGTAATTCTGCCTGGAAAAGTACACATGGTTATTTTTA Arborophila_rufipectus CGCTGTTGAGCAGGGATTTTTAAGCGCAGCGATGCCAGTGAGTGCCCCAA Chrysolophus_amherstiae CACTGTTGAGCAGGGATTTTTATGCACAGTGATGCCAGTCACTGCCCCAG Gallus_gallus TACCGTTGAGCAGGGGTTTTTAAGCACGGCGATGCCCATTACTGCCCCAA Lophophorus_lhuysii TACTGTTGAGCAGGGATTTTTATGCACAGTGATGCCAGTTACTGCCCCAA Meleagris_gallopavo TACTGTTGAGCAGGGATTTTTATGCACAGTGATGCCAGTTACTGCCCCAA Phasianus_colchicus CACTGTTGAGCAGGGATTTTTATGCACAGTGATGCCAGTTACTGCCCCAG Pucrasia_macrolopha TACTCTT-AGTAGACAATTACATGAACGGTGATGCCAGTTACTGCCCCAG Syrmaticus_reevesii CGCTGTTGAGCAGGGATTTTTATGCACGGTGATGCTAGTTACTGCCCCAG Tetraophasis_szechenyii TACTGTTGAGCAGGGATTTTTATGCACAGTGATGCCAGTTACTGCCCCAA Tragopan_temminckii TACCGTTGAGCAGGGATTTTTAAGCACAGTGATGCCAGTTACTGCCCCAA Arborophila_ardens CCAGCAGCCGGAATCAGGCACGGAGCAGCGATGCTCCTCCTGCACAAATC Arborophila_brunneopectus A-AGCAGCTGGAATCAGGG----------GATGCTCCTCCCGCAGAAATC Anas_platyrhynchos GTTCCTGTTCTTTTCAAAAATA-ACTGGAGGCATGAATCCAA-------- Arborophila_rufipectus ACAGCAGCTGGAATCAGGC----------GATGCTCCTCCCGCAGAAATC Chrysolophus_amherstiae CCAGCAGCCGGAATCAGGCACGGAGCAGCGATGCTCCTCCTGCACAAATC Gallus_gallus ACAGCAGCTGGAATCAGGCATGGAGCGGCAATGCTCCTCCTG-------- Lophophorus_lhuysii A--ACAGCTGAAATCAGGCACGGAGCAGCGATGCTCCTCCTGCACAAATC Meleagris_gallopavo ACAGCAGCTGGAATCAGGCGCGGAGCAGCGATGCTCCTCCTGCACAAATC Phasianus_colchicus CCAGCAGCTGGAATCAGGCACGGAGCAGCGATGCTCCTCCTGCACAAATC Pucrasia_macrolopha CCAGCAGCTGGAATCAGGCACGGAGCAGCGATGCTCCTCCTGCACAAATC Syrmaticus_reevesii CCAGCAGCTGGAATCAGGCACGGAGCAGTGATGCTCCTCCTGCACAAATC Tetraophasis_szechenyii ACAGCAGCTGGAATCAGGCACGGAGCAGCGATGCTCCTCCTGCACAAATC Tragopan_temminckii ACAGCAGCTGGAATCAGGCACGTGG-AGCAACGCTCCTCCTGCACAAATC Arborophila_ardens AGTGCTGAAGCTCAGAATGGACTCCTCGTCCTGCTCTGCTGAACGGCCTC Arborophila_brunneopectus AGAGCTGGAGGGCAGAATGGA--CCTTCTCCTGCTCTGCAGAAGGGCCTC Anas_platyrhynchos ACCTCCAAAATGTGGCATCAT--CCTTCTCCTTCT--------------- Arborophila_rufipectus AGTGCTGGAGGGCAGAATGGA--CCTTCTCCTGCTCTGCAGAAGGGCCTC Chrysolophus_amherstiae AGTGCTGAAGCTCAGAATGGACTCCTCGTCCTGCTCTGCTGAACGGCCTC Gallus_gallus --TGCTGGAGCTCAGAATGGACCCCTCCTCTCGCTCTGCTGAATGGCCTC Lophophorus_lhuysii AGTGCTGAAGCTCAGAATGGACTCCTCCTCCTGCTCTGCTGAACGGCCTC Meleagris_gallopavo AGTGCTGGAGCTCAGAATGGACTCCTCCTCCTGCTCTGCTGAATGGCCTC Phasianus_colchicus AGTGCTGAAGCTCAGAATGGACTCCTTGTCCTGCTCTGATGAACGGCCTC Pucrasia_macrolopha AGTGCTGGAGCTCAGAATGGACTCCTCCTCCTGCTCTGCTGAATGGCCTC Syrmaticus_reevesii AGTGCTGAAGCTCAGAATGGACTCCTCGTCCTGCTCTGCTGAACGGCCTC Tetraophasis_szechenyii AGTGCTGAAGCTCAGAATGGACTCCTCCTCCTGCTCTGCTGAATGGCCTC Tragopan_temminckii AGGGCTGAAGCTCAGAACGGACTCCTCCTCCTGCTCTGCTGAATGGCCTC Arborophila_ardens AGCAAAGCAGCACATGGGCACCGAATGTA-TTCAAGGGAAGATGACTTTC Arborophila_brunneopectus AGCAAAGCAGCACAGGGGCACCGGGGGTCCTTCAAGGGAAGATGACTTTC Anas_platyrhynchos ------GCAACCTGTGACT--------TATCCCCAGAAACCCTGGTAT-- Arborophila_rufipectus AGCAAAGCAGCACAGGGGCACTGAGGGTCCTTCAAGGGAAGATGACATTC Chrysolophus_amherstiae AGCAAAGCAGCACATGGGCACCGAATGTA-TTCAAGGGAAGATGACTTTC Gallus_gallus AGCAAAGCAGCACAGGGGCAGCAAGGGCACTGCATGGGAAGATGACTTCC Lophophorus_lhuysii AGCAAAGCAGCACAGGGGCACCAAATGTACTTCAAGGGAAGATGACCTTC Meleagris_gallopavo AGCAAAGCAGCACAGGGGCACCGAATGTCCTTCAAGGGAAGGTGACTT-- Phasianus_colchicus AGCAAAGCAGCACAGGGGCACCAAATGTACTTCAAGGGAAGATGACTTCC Pucrasia_macrolopha AGCAGAGCAGCACAGGGGCACCGAATGTATTTCAAGGGAAGATGACTTTC Syrmaticus_reevesii AGCAAAGCAGCACAGGGGCACCAAATGTACTTCGAGGGAAGATGACTTTC Tetraophasis_szechenyii AGCAAAGCAGCACAGGGGCATCGAATGTACTTCAAGGGAAGATGACCTTC Tragopan_temminckii AGCAAAGCAGCACAGGGGCACTGAATGTACTTCAAGGGGAGATGACTTTC Arborophila_ardens TGCTGCATGGCTGTGCCCCACGTGCCTGGTGATGGCTCTGATGTTGGATC Arborophila_brunneopectus TGTC-CATGGCAGTGCCCCACATACCTGGTGATGGCTCTGATGTTGGATC Anas_platyrhynchos -----------GGTGCCCCAGATACCTGGAGATGGCTCTGATTTTGGATC Arborophila_rufipectus TGCC-CATGGCAGCGCCCCACATACCTGGTGATGGCTCTGATGTTGGATC Chrysolophus_amherstiae TGCTGCATGGCTGTGCCCCACGTGCCTGGTGATGGCTCTGATGTTGGATC Gallus_gallus TGCTGCATGGCAGTGCCCCACGTACGTGGTGATGGCTCTGATGTTGGATC Lophophorus_lhuysii TGCTGCATGGCAGTGCCCCATGTGCCTGGTGATGGCTCTGATGTTGGATC Meleagris_gallopavo TGCTGCATGGCGGTGCCCCACGTGCCTGGAGCTGGCTCTGATGTTGGATC Phasianus_colchicus TGCTGCATGGCTGTGCCCCACGTGCCTGGTGATGGCTCTGATGTTGGATC Pucrasia_macrolopha TGCTGCATGGCAGTGCCCCACGTGCCTGGTGATGGCTCTGATGTTGGGTC Syrmaticus_reevesii TGCTGCATGGCTGTGCCCCACGTGCCTGGTGATGGCTCTGATGTTGGATC Tetraophasis_szechenyii TGCTGCATGGCAGTGCCCCACGTGCCTGGGGATGGGTCTGATGTTGGATC Tragopan_temminckii TGCAGCATGGCAATGCCCCACGTGCCTGGTGATGGCTCTGCTGTTGGATC Arborophila_ardens CACATGAGGATATTTACAGCCAGAAACCATGAAAACCCATCCATCTCTTA Arborophila_brunneopectus CACATGGGGGTATTTACAACTAGAAACCATGAAAACCCATCCATCTCTTA Anas_platyrhynchos CACGTGAGGATATTTACAGTCAGAAACCATGAAAACCCATCTGTCTCTTA Arborophila_rufipectus CACATGGGGATATTTACAACCAGAAACCATGAAAACCCATCCATCTCTTA Chrysolophus_amherstiae CACATGAGGATATTTACAGCCAGAAACCATGAAAACCCATCCATCTCTTA Gallus_gallus CACATGAGGATATTTACAGCTGGAAACCATGAAAAGCCATCCATCTCTTA Lophophorus_lhuysii CCCATGAGGATATTTACAGCTAGAAACCATGAAAACCCATCCATCTCTTA Meleagris_gallopavo CACATGAGGACATTTACAGCTAGGAACCACGAAAACC-ATCCATCTCTTA Phasianus_colchicus CACATGAGGATATTTACAGCCAGAAACCATGAAAACCCATCCATCTCTTA Pucrasia_macrolopha CACATGAGGATATTTACAGCTAGAAACCATGAAAACCCATCCATCTCTTA Syrmaticus_reevesii CACACGAGGATATTTACAGCCAGAAACTATGAAAACCCATCCATCTCTTA Tetraophasis_szechenyii CACCCGTATATATACACCGGGGGAGACTGGGAGAACAAGACCTTCCCTTT Tragopan_temminckii CACATGGGGATATTTACAGCTAGAAACCATGAAAACCCATCCATCTCTTA Arborophila_ardens ATCGCAATACTGTCTGTAATTCAGTGACAGTTGTTTC-CAAAGATCTCTG Arborophila_brunneopectus ATCGCAATACTGTCTGTAATTCGGTGA-AGTTGTTTC-CAAAGATCTCTG Anas_platyrhynchos ATTGCACTACCGTCAGTTATCTTG----AGTTGTTTCACAAAGATCTCTG Arborophila_rufipectus ACTGCAAGGCTGTCTGTAATTCAGTGA-AGTTGTTTCACAAAGATCTCTG Chrysolophus_amherstiae ATCGCAATACTGTCTGTAATTCAGTGACAGTTGTTTC-CAAAGATCTCTG Gallus_gallus ATCGCAATACTGTCTGTAATTCAGTGACAGTTGTTTCACAAAGATCTCTG Lophophorus_lhuysii TTCTCAAAATTGTCTGTAATTCAGTGACAGTTGTTT-ACAA-GATCTCTG Meleagris_gallopavo ACTGCAATACTGTCCGTAATTCAGTGACAGTTGTTTCACAAAGATCTCTG Phasianus_colchicus ATCGCAATACTGTCTGTGATTCAGTGACAGTTGTTTC-CAA-GATCTCTG Pucrasia_macrolopha A-CGCAATACTGTCTGTAATTCAGCGACAGTTGTTTC-CAAAGATCTCTG Syrmaticus_reevesii ACCGCAATACTGTCTGTAATTCAGTGACAGTTGTTTC-CAAAGATCTCTG Tetraophasis_szechenyii TTCACAAAAGTGTCTGTAATTCAGTGAGAGTTGTTT-ACAA-GATCTCTG Tragopan_temminckii ATCGCAATACTGTCTGTAATTCAGTGACAGTTGTTTCACAAAGATCTCTG Arborophila_ardens CCAAAAGTCCATGCAGAGCATTGAGAAAACTTTCTGAAAAAAAAACACTG Arborophila_brunneopectus CCAAAAGTCCATGCAGAGCATTGAGAAAACTTTCTGAAAAAAAAACACTG Anas_platyrhynchos CTAAAAGTCCATGCAGAGCACTGAGGAAACTTTCTCAAAAAAAAACACCT Arborophila_rufipectus CCAAAAGTCCATGCAGAGCATTGAGAAAACTTTCTGGAAAAAAAACACTG Chrysolophus_amherstiae CCAAAAGTCCATGCAGAGCATTGAGAAAACTTTCTTAAAAAAAAACATTG Gallus_gallus CCAAAAGTCCATGCAGAGCATTGAGAAAACTTTCTTAAAAAGCAGCACTG Lophophorus_lhuysii CCAAA-GTCCATGCAGAGCACTGAGAAAACTTTCTTAAAAAAAAACATTG Meleagris_gallopavo CCAAAAGTCCATGCAGAGTATTGAGAAAACTTTCTTAAAAAAAA-CATTG Phasianus_colchicus CCAAAAGTCCATGCAGAGCATTGAAAAAACTTTCTTAAAAAAAAACATTG Pucrasia_macrolopha CCAAAAGTCCATGCAGAGCATTGAGAAAACTTTCTTAAAAAAAAACATTG Syrmaticus_reevesii CCAAAAGTCCATGCAGAGCATTGAGAAAACTTTCTTAAAAAAAAACATTG Tetraophasis_szechenyii CCAAAAGTCCATGCAGAGCATTGAGAAAACTTTCTTAAAAAAAAACATTG Tragopan_temminckii CCAAAAGTCCATGCAGAGCATTGAGAAAACTTTCTTAAAAAACAACATTG Arborophila_ardens AGCGTTGGGCACAGATCGTCCTC-GGCTTCTGAGGAGCGATCATTAAAAC Arborophila_brunneopectus AGCGTTGGGCACAGATCGTCCTC-GGCTTCTGAGGAGCGATCATTAAAAC Anas_platyrhynchos AGAGTTAGGCACAGATTGTCCTCCAGCTTCTGAGAAGTAATCATTAAAAC Arborophila_rufipectus AGCGTTGGGCACAGATCGTCCTC-GGCTTCTGAGGAGCGATCATTAAAAC Chrysolophus_amherstiae AGCGTCGGGCACAGATCGTCCTCCGGCTTCTGAGAAACGATCATTAAAAC Gallus_gallus AGCGTTGGGCACAGATCGTCCTCCGGCTTCTGAGAAACGATCATTAAAAC Lophophorus_lhuysii AGCGTTGGGCACAGATCGTCCTCCGGCTTCTGAGAAACGATCATTAAAAC Meleagris_gallopavo AGCGTTGGGCACAGATCGTCCTCCGGCTTCTGAGAAATGATCATTAAAAC Phasianus_colchicus AGCGTCGGGCACAGATCGTCCTCCGGCTTCTGAGAAACGATCATTAAAAC Pucrasia_macrolopha AGCGTTGGGCACAGATCGTCCTCCGGCTTCTGAGAAACGATCATTAAAAC Syrmaticus_reevesii AGCGTCGGGCACAGATCGTCCTCCGGCTTCTGAGAAACGATCATTAAAAC Tetraophasis_szechenyii AGCGTTGGGCACAGATCGTCCTCAGGCTTCTGAGAAACGATCATTAAAAC Tragopan_temminckii AGCGTTGGGCACAGATCGTCCTCCAGCTTCTGAGAAACGATCATTAAAAC Arborophila_ardens TTCAGAGGTGTTTCTCTCTCTGTTAGCAGCTCCCACGCTCCCGCCAGTTT Arborophila_brunneopectus TTCAGAGGTGTTTCTCTCTCTGTTAGCAGCTCCCACGCTCCCGCCAGTTT Anas_platyrhynchos TTCTGAGATATTTCT----CTGCTAACATTTCCCAGCTTCTTGCCAATTT Arborophila_rufipectus TTCAGAGGTGTTTCTCTCTCTGTTAGCAGCTCCCACGCTCCCGCCAGTTT Chrysolophus_amherstiae TTCAGAGGTGTTTCTCTCTCTGTCAGCAGCTCCCACGCTCCCGCCAGTTT Gallus_gallus TTCAGAGGTGTTTCTCTCCCTGTTAGCATCTCCCACGCTCCCTCCAGTTT Lophophorus_lhuysii TTCAGAGGTGTT-------CTGTCAGCAGCTCCCACGCTCCCGCCAGTTT Meleagris_gallopavo TTCAGAGGTGTTTCTCTCTCTGTCAGCAGCTCCCACGCTCCCGCCAGTTT Phasianus_colchicus TTCAGAGGTGTTTCTCTCTCTGTCAGCAGCTCCCACGCTCCCGCCAGTTT Pucrasia_macrolopha TTCAGAGGTGTTTCTCTCTCTGTCAGCAGCTCCCACGCTCCCGCCAGTTT Syrmaticus_reevesii TTCAGAGGTGTTTCTCTCTCTGTCAGCAGCTCCCACGCTCCCGCCAGTTT Tetraophasis_szechenyii TTCAGAGGTATTTCTCTCTCTGTCAGCAGCTCCCACGCTCCCGCCAGTTT Tragopan_temminckii TTCAGAGGTGTTTCTCTCTCTGTCAGCAGCTCCCACGCTCCCACCAGTTT Arborophila_ardens CCAGGGCTTTGGCTGCTGAACCAACATCTCATATCCTTCACTCATCTGAT Arborophila_brunneopectus CCAGGGCTTTGGCTGCTGAACCAACATCTCATATCCTTCACTCATCTGAT Anas_platyrhynchos CCTGGGTCTAGACAGCTGAA------------------------------ Arborophila_rufipectus CCAGGGCTTTGGCTGCTGAACCAACATCTCATATCCTTCACTCATCTGAT Chrysolophus_amherstiae CCAGGGCCTTGGCTGCTGAACCAACATCTCACATCCTTCACTCATCTGAT Gallus_gallus CCAGGGCCTTGGCTGCTGAATCAACATCTCATATCCTTCACTCATCTGAC Lophophorus_lhuysii CCAGGGCCTTGGCTGCTGAACCAGCATCTCATATCCTTCACTCATCTGGT Meleagris_gallopavo CCAGGGCCTTGGCTGCTGAACCGACATCTCATATCCTTCACTCATCTGAT Phasianus_colchicus CCAGGGCCTTGGCTGCTGAACCAACATCTCACATCCTTCACTCATTTGAT Pucrasia_macrolopha CCAGGGCCTTGGCTGCTGAACCAGCATCTCATATCCTTCACTCATCTGAT Syrmaticus_reevesii CCAGGGCCTTGGCTGCTGAACCAACATCTCACATCCTTCACTCATCTGAT Tetraophasis_szechenyii CCAGGGCCTTGGCTGCTGAACCAACATCTCATATCCTTCACTCATCTGGT Tragopan_temminckii CCAGGGCCTTGGCTGCTGAACCAACATCTCATATCCTTCACTCATCTGAT Arborophila_ardens CACAGCCTCACCACCTTTGAAAGGTGCATCCCCCACTGCTGAGCACGAGG Arborophila_brunneopectus CACAGCCTCACCACCTTTGAAAGGTGCATCCCCCACTGCTGAGCACGAGG Anas_platyrhynchos -------------------------------------------------- Arborophila_rufipectus CACAGCCTCACCACCTTTGAAAGGTGCATCCCCCACTGCTGAGCACGAGG Chrysolophus_amherstiae CACAGCCTGATCACCTTTGAAAGGTGCATCCCCCACTGCTGAGCATGAGG Gallus_gallus TGCAGCCTGATCACCTTCGAAAGGTGCATCCCCCACTGCTGAGCACGAGG Lophophorus_lhuysii CACAGCCTTATGACCTTTGAAAGGTGCATCCCCCACTGCTGAGCATGAGG Meleagris_gallopavo TGCGGCCTGATCACTTTTGAAAGGTGCATCTCC-AATGCTGAGCATGAGG Phasianus_colchicus CACAGCCTGATCACCTTCGAAAGGTGCATCCCCCACTGCTGAGCATGAGG Pucrasia_macrolopha CACAGCCTGATCACCTTTGAAAGGTGCATCCCCCACTGCTGAGCATGAGA Syrmaticus_reevesii CACAGCCTGATCACCTTTGAAAGGTGCATCCCCCACTGCTGAGCATGAGG Tetraophasis_szechenyii CACAGCCTGATCACCTTTGAAAGGTGCATCCCCCACAGCTGAGCATGAAG Tragopan_temminckii CACAGCCTGACCACCTCCAAAAGGTGCATCCCCCACTGCTGAGCATGAGG Arborophila_ardens ATGGGGGCTTCTGTTCC----------CTCGTCCTCCGTGTCCATCCCAT Arborophila_brunneopectus ATGGGGGCTTCTGTTCC----------CTCGTCCTCCGTGTCCATCCCAT Anas_platyrhynchos ---------------------------CTTGTCCTGCACACCCACCCCAG Arborophila_rufipectus ATGGGGGCTTCTGTTCC----------CTCGCCCCCCGTCTCCATCCCAT Chrysolophus_amherstiae ATGGGGGTTCCTGTTACTACCACCAGCCTCGTCCCGTGTGTCCATCCCAT Gallus_gallus ATGGCGGTTCCTGTTCCCACCACCAGCCTCATCCTGTGTGTCCATCCCAT Lophophorus_lhuysii ATGGGGGTTCCTGTTCCTACCACCAGCCTCGTCCCATGTGTCCATCCCAT Meleagris_gallopavo ATGGGGGTTCCTGTTCCTACCACCAGCCTCGTCCCGTGTGCCCATCCCAT Phasianus_colchicus ATGGGGGTTCCTGTTACGACCACCAGCCTCGTCCCGTGTGTCCATCCCTT Pucrasia_macrolopha ATGGGGGTTCCTGTTCCTACCAGCAGCCTCATCCCGTGTGTCCATCGCGT Syrmaticus_reevesii ATGGGGCTTCCTGTTACTACCACCAGCCTCATCCCGTGTGTCCATCCCAT Tetraophasis_szechenyii ATGGGGGTTCCTGTTCCTACCACCAGCCTCGTCCCATGTGTCCATCCCAT Tragopan_temminckii ATGGGGGTTCCTGTTCCTACCACCAGCCTCGTCCCATGTGTCCATCCCAT Arborophila_ardens GGGACCACCCAGACCAGCCCCACCTACCGGCAGCAAAGGGGTTAAAAGGC Arborophila_brunneopectus GGGACCACCCAGACCAGCCCCACCTACCGGCAGCAAAGGGGTTAAAAGGC Anas_platyrhynchos G---------------------CCGGCCAGCAGGGAAGGGGCTGAAATGC Arborophila_rufipectus GGGACCACCCAGAGCAGCCCCACCTACCGGCAGCAAAGGGGTTAAAAGGC Chrysolophus_amherstiae GCGACTGCCCAGACCAGCCCTACTGACCGGCAGCAAAGGGGTTAAAAGGC Gallus_gallus GGGACCGCCCAGACCAACCCCACTGAGCAGCAGCAAAGGGGTTAAAAGGC Lophophorus_lhuysii GCGA-TGCCCAGACCAGCCCCACTGACCGGCAGCAAAGGGGTTAAAAGGC Meleagris_gallopavo GCGACTGCCCAGACCAGCCCTACTGACCAGCAGCAAAGGGATTAAAAGGC Phasianus_colchicus GTGACTGCCCAGACCAGCCCTACTGACTGGCACCAAAGGGGTTAAAAGGC Pucrasia_macrolopha GTGACTGCCCAGACCAGCTCTACTGATCAGCAGCAAAGGGGTTAAAAGGC Syrmaticus_reevesii GTGACTGCCCAGACCAGCCCTACTGACCGGCAGCAAAGGGGTTAAAAGGC Tetraophasis_szechenyii GCGA-TGCCCAGACCAGCCCCACTGACCAGCAGCAAAGGGGTTAAAAGGC Tragopan_temminckii GCGACTGCCCAGACCAACCCCACTGACCGGCAGCAAAGGGGTTAAAAGGC Arborophila_ardens TTCACTGCTCCTTTTAGATCTGGGCTGCACTTATTTGCAGGCTGAATTTC Arborophila_brunneopectus TTCACTGCTCCTTTTAGATCTGGGCTGCACTTATTTGCAGGCTGAATTTC Anas_platyrhynchos CTTACTGCTCCTTTGAGACCTGGGCTCCACTTGTTTGCAGACTGAATT-C Arborophila_rufipectus TTCACTGCTCCTTTTAGATCTGGGCTGCACTTATTTGCAGGCTGAATTTC Chrysolophus_amherstiae CTCACTGCTCCTTTTAGATCCGGGCTGCACTTGTTTGCAGGCTGAATTTC Gallus_gallus CTCGCTGCTCCTTTCAGATCTGGGCTGCACTTGTTTGCAGGCTGAATTTC Lophophorus_lhuysii CTCACTGCTCCTTTTAGATCTGGGCTGCACTTGTTTGCAGGCTGAATTTC Meleagris_gallopavo CTCACTGCTCCTTTTAGATCTGGGCTGCACTCGTTTGCAGGCTGAATTTC Phasianus_colchicus CTCACTGCTCCTTTTAGACCCGGGCTGCACTTGTTTGCAGGCTGAATTTC Pucrasia_macrolopha CTCGCTGCTCCTTTTAGATCTGGGCTGCACTTGTTTGCAGGCTGAATTTC Syrmaticus_reevesii CTCACTGCTCCTTTTAGATCCGGACTGCACTTGTTTGCAGGCTGAATTTC Tetraophasis_szechenyii CTCACTGCTCCTTTTAGATCTGGGCTGCACTTGTTTGCAGGCTGAATTTC Tragopan_temminckii CTCACTGCTCCTTTTAGATCTGGGCTGCACTTGTTTGCAGGCTGAATTTC Arborophila_ardens CCAGAAGTCATGGCTTTTTACTAGCGGATCTGCTGTAGAACCATGTTGTT Arborophila_brunneopectus CCAGAAGTCATGGCTTTTTACTAGCGGATCTGCTGTAGAACCATGTTGTT Anas_platyrhynchos CCAGAAGCCGAGGCTTTTTACGAGTGGATCTGCTGTAGAACCATGTTATT Arborophila_rufipectus CCAGAAGTCATGGCTTTTTACTAGCGGATCTGCTGTAGAACCATGTTGTT Chrysolophus_amherstiae CCAGAAGTCATGGGTTTTTACTAGCGGAACTGCTGTAGAACCATGTTGTT Gallus_gallus CCAGAAGTCATGGCTTTTTACCAGCGGATCTGCTGTAGAACCATGTTGTT Lophophorus_lhuysii CCAGAAGTCATGGCTTTTTACTAGCGGATCTGCTGTAGAACCATGTTGTT Meleagris_gallopavo CCAGAAGTCGTGGCTTTTTACTAGCGGATCTGCTGTAGAACCATGTTGTT Phasianus_colchicus CCAGAAGTCATGGCTTTTTACTAGCGGATCTGCTGTAGAACCATGTTGTT Pucrasia_macrolopha CCAGAAGTCATGGCTTTTTACTAGCGGATCTGCTGTAGAACCATGTTGTT Syrmaticus_reevesii CCAGAAGTCATGGCTTTTTACTAGCGGATCTGCTGTAGAACCATGTTGTT Tetraophasis_szechenyii CCAGAAGTCATGGCTTTTTACTAGCGGATCTGCTGTAGAACCATGTTGTT Tragopan_temminckii CCAGAAGTCATGGCTTTTTACTAGCGGATCTGCTGTAGAACCATGTTGTT Arborophila_ardens ATAGATTGCAAGTCC--TAAAGGTCAGATA-CACAATTCCAAATACCTGT Arborophila_brunneopectus ATAGATTGCAAGTCC--TAAAGGTCAGAAA-CACAATTACAAATACCTGT Anas_platyrhynchos ATAGATTGCAAGTTCCTTAAAGGTCAGATAACACAATACCAAATATTGGT Arborophila_rufipectus ATAGATTGCAAGTTCCTTAAAGGTCAGATA-CCCAATCACAAATACCTGT Chrysolophus_amherstiae ATAGATTGCAAGTCCC--AAAGGTCAGATAACA-AATACCAAATACCTGT Gallus_gallus ATAGATTGCAAGTTCCTTAAAGGTCAGATAACACAATACCAAATACCTGT Lophophorus_lhuysii ATAGATTGCAAGTTCCTTAAAGGTCAGATAACACAATACCAAATACCTGT Meleagris_gallopavo ATAGATTGCAAGTTCCTTAAAGGTCAGATAACACAATACCAAATACCTGT Phasianus_colchicus ATAGATTGCAAGTTCCT-AAAGGTCAGATAACACAATACCAAATACCTGT Pucrasia_macrolopha ATAGATTGCAAGTTCCTTAAAGGTCAGATAACACAATACCAAATACCTGT Syrmaticus_reevesii ATAGATTGCAAGTTCCT-AAAGGTCAGATAACACAATACCAAATACCTGT Tetraophasis_szechenyii ATAGATTGCAAGTTCCTTAAAGGTCAGATAAC-CAATACCAAATACCTGT Tragopan_temminckii ATAGATTGCAAGT-CCTTAAAGGTCAGATAACACAATACCAAATACCTGT Arborophila_ardens AAAAACCAATAGCAGTATTCTTCAATGGCTTTGCAAAACAATTCCTTGAG Arborophila_brunneopectus AAAAACCAATAGCAGTATTCTTCAATGGCTTTGCAAAACAATTCCTTGAG Anas_platyrhynchos AAAAGCCAATAGGAATATTTTTCAATGGGTCTGCAAAATAAC-------- Arborophila_rufipectus AAAAACCAATAGCAGTATTCTTCAGTGGCTTTGCAAAACAATTCCTTGAG Chrysolophus_amherstiae AAAAAACAATGGCAGTATTCTTCAATGGCTCCGCAAAACAATACCTTGAG Gallus_gallus AAAAACAAATAGCAGTATTCTTCAATGGCTCTGCAAAACAATTCTTTGAG Lophophorus_lhuysii AAAAACCAATAACAGTATTCTTCAGTGGCTCTGCAAAACAATACCTTGAG Meleagris_gallopavo AAAAAACAATGGCAATATTCTTCAATGGCTCTGCAAAACAATACCTTGAG Phasianus_colchicus AAAAAACAATGGCAGTATTCTTCAATGGCTCTGCAAAACAATACCTTGAG Pucrasia_macrolopha AAAAAACAATGGCAATATTCTTCAATTGTTCTGCAAAACAACACCTTGAG Syrmaticus_reevesii AAAAAACA------GTATTCTTCAATGGCTCTGCAAAACAATACCTTGAG Tetraophasis_szechenyii AAAAACCAATAGCAGTATTCTTCAATGGCTCTGCAAAACAATACCTTGAG Tragopan_temminckii AAAAACCAATAGCAGTATTCTTCAATGGCTCTGCAAAACAATACCTTGAG Arborophila_ardens ATCTCCAGGCTTGGATGACCTTCTCACTCACGCAAACAGCTTTTTGAAGA Arborophila_brunneopectus ATCTCCAGGCTTGGATGACCTTCTCACTCACGCAAACAGCTTTTTGAAGA Anas_platyrhynchos -------------------------------------------------- Arborophila_rufipectus ATCTCCAGGCTTGGATGACCTTCTCACTCACGCAAACAGCTTTTTGAAGA Chrysolophus_amherstiae ATCTCCACACTTGGATGACATTCTCACTCATGCATACAGCTTTTTAAAGA Gallus_gallus ATCTCCAGGCTTGGATGACATTCTCACTCATGCATACAGCTTTTTAAAGA Lophophorus_lhuysii ATCTCCACACTTGGATGACATTCTCACTCATGCATACAGCTTTTTAAAGA Meleagris_gallopavo ATCTCCACACTTGGATGACATTCTCACTCATGCATACAGCTTTTTAAAGA Phasianus_colchicus ATCTCCACACTTGGATGACATTCTCACTCATGCATACAGCTTTTTAAAGA Pucrasia_macrolopha ATCTCCACACTTGGATGACATTCTCA----TGCATACAGCTTTTTAAAGA Syrmaticus_reevesii ATCTCCACACTTGGATGACATTCTCACTCATGCATACAGCTTTTTGAAGA Tetraophasis_szechenyii ATCTCCACACTTGGATGACATTCTCACTCATGCATACAGCTTTTTAAAGA Tragopan_temminckii ATCTCCACACTTGGATGACATTCTCACTCATGCATACAGCTTTTTAAAGA Arborophila_ardens GCAGCAGAGCCACGCTTATCTGGTCACCTCTTCCCTCCCCTTATGGGTGG Arborophila_brunneopectus GCAGCAGAGCCACGCTTATCTGGTCACCTCTTCCCTCCCCTTATGGGTGG Anas_platyrhynchos ----------------------------------CTCCGTTCAAGGGTGG Arborophila_rufipectus GCAGCAGAGCCACGCTTATCTGGTCACCTCTTCCCTCCCCTTACGGGTGG Chrysolophus_amherstiae GCAGCAGAGCCACACATATCTGGTCACCCCTTCCCTCCAATTATGGGTAG Gallus_gallus GCAGCAGAGCCACACATATCTGGTCGCCCCTTCCCTCCCCTCAGGGGTGG Lophophorus_lhuysii GCAGCAGAGCCACACATATCTGGTCACCCCTTCCCTCCAATTATGGGTGG Meleagris_gallopavo GCAGCAGAGCCACACATATCTGGTTACCC-----CTCCAGTTATGGGTGA Phasianus_colchicus GCAGCAGAGCCACACATATCTGGTCACCCCTTCCCTCCAATTATGGGTAG Pucrasia_macrolopha GCAGCAGAGCCACACATTTCTGGTCACCCTTTCTCTCCAATTATGGGTGG Syrmaticus_reevesii GCAGCAGAGCCACACATATTTGGTCACCCCTTCCCTCCAATTATGGGTGG Tetraophasis_szechenyii GCAGCAGAGCAACACGTATCTGGTCACCCCTTCCCTCCAATTATGGGTGG Tragopan_temminckii GCAGCAGAGCAACACATATCTGGTCACCCCTTCCCTCCAATTATGGGTGG Arborophila_ardens GATGTTATGCTAGGCTTCCGCCGTCTGGCTT-CCCCTGGTGAAAGCAGCC Arborophila_brunneopectus GATGTTATGCTAGGCTTCCGCCGTCTGGCTT-CCCCTGGTGAAAGCAGCC Anas_platyrhynchos GCTGTAACTCCAGGCTTCTGCTGTCTGGCTT-CCACTGGTTAGAGCCGCC Arborophila_rufipectus GATGTTATGCTAGGCTTCTGCCGTCTGGCTT-CCCCTGGTGAAAGCAGCC Chrysolophus_amherstiae GTTGTCAGGCTAGGCTTTTGCTGTCTGACTCCCCCCTGGTGAAAGCAGCC Gallus_gallus GATGTTACACTAGGCTTCTGCTGTCTGGCTCCCCCCTGGTGAAAGCAGCC Lophophorus_lhuysii GTTGTCAGGCTAGGCTTCTGCTGTCTGGCTCACCCCTGGTGAAAGCAGCC Meleagris_gallopavo GTTGTCAGGCTAGACTTCTGCTGTCTGGCTCCCCCCTGGTGAAAGCAGCC Phasianus_colchicus ATTGTCAGGCGAGGCTTTTGCTGTCTGGCTCCCCCCTGGTGAAAGCAGCC Pucrasia_macrolopha GTTGTCAGGCTAGGCTTCTGCTGTCTGGCTCCCTCCTGGTGAAAGCAGCC Syrmaticus_reevesii GTTGTCAGGCTAGGCTTTTGCTGTCTGGCCCCCCCCTGGTGAAAGCAGCC Tetraophasis_szechenyii GTTGTCAAGCTAGGCTTCTGCTGTCTGGCTCACCCCTGGTGAAAGCAGCC Tragopan_temminckii GTTGTCAAGCTAGGCTTCTGCTGTCTGGCTCACCCCTGGTGAAAGCAGCC Arborophila_ardens TGGCTGTTGGTCACAGGTTCTCCTAAAGTCCTCCCTTTGCCCTCCCTGGC Arborophila_brunneopectus TGGTTCTTGGTCAGAGGTTCTCCTAATGTCCTCCCTTTGCCCTCCCTGCC Anas_platyrhynchos TAGTTCTTAATCAGATGTTGCCCTAATCTACTCGCTTTGCCCTCCCGGCA Arborophila_rufipectus TGGCTCTTGGTCAGAGGTTCTCCTAATGTCGTCCCTTTGCCCTCCCTGGC Chrysolophus_amherstiae TGGTTCTTGGTCAGAG-TAGCCCTATAGTCCTCCCTTTGCCCTCCCTGGC Gallus_gallus TGGTTCTTGGTCAGAAGTTGCCCTAATGTCCTCCCTTTGCCCTGCCTGGC Lophophorus_lhuysii TGGTTCTTGGTCAGAGGTTGCCCTAATGTCCTCCCTTTGCCCTCCCTGGC Meleagris_gallopavo TGGTTCTTGGTCAGAGGTTGCCCTAATGTCCTCCCTTTGCCCTCCCTGGC Phasianus_colchicus TGGTTCTTGGTCAGAG-TTGCCCTATAGTCCTCCCTTTGCCCTCCCTGGC Pucrasia_macrolopha TTGATCTTCATCAGAGGTTGCCCTATAGTCCTCCCTTTGCTCTCCCTGGC Syrmaticus_reevesii TGGTTCTTGGTCAGAG-TTGCCCTATAGTCCTCCCTTTGCCCTCCCTGGC Tetraophasis_szechenyii TGGTTCTTGGTCAGAGGTTGCCCTATAGTCCTCCCTTTGCCCTCCCTGGC Tragopan_temminckii TGGTTCTTGGTCAGAGGTTGCCCTAATGTCCTCCCTTCGCCCTCCTTGGC Arborophila_ardens GTAAGCCAGAACTAGACCTAGAAAGAGTCTCCTTGGGAAGGAAATAGTGG Arborophila_brunneopectus GTAAGCCAGAACTAGACCTAGAAGGAGTCTCCTTGGGAAGGAAATAGTGG Anas_platyrhynchos ATAAGCCAGGTCTAGAACAAGAAAGAGTCTCCTTGGGAAGGAAACAGTGG Arborophila_rufipectus GTAAGCCAGAACTAGACCTAGAAAGAGTCTCCTTGGGAAGGAAATAGTGG Chrysolophus_amherstiae ATAAGCCAGATCTAGATCTAGAAAGGGTCTCCTTAGGAAGGAAATAATGG Gallus_gallus ATAAGCCAGATCTAGATCGAGAAAGGGTCTCCTTGGGAAGGAAATAGTGG Lophophorus_lhuysii ATAAGCCAGATCTAGATCTAGAAAGGGTCTCCTTAGGAAGGAAATAGTGG Meleagris_gallopavo ATAA-CCAGATCTAGATCTAGAAAGGGTCTCCTTAGGAAGGAAATAGTGG Phasianus_colchicus ATAAGGCAGATCTAGATCTAGAAAGGGTCTCCTTAGGAAGGAAATAGTGG Pucrasia_macrolopha ATAAGCCAGATCTAGATCTAGAAAGGGTCTCCTCAGGAAGGAAATAGTGG Syrmaticus_reevesii ATAAGGCAGATCTAGATCTAGAAAGGGTCTCCTTAGGAAGGAAATAGTGG Tetraophasis_szechenyii ATAAGCCAGATCTAGATCTAGAAAGGGTCTCCTTAGGAAGGAAATAGTGG Tragopan_temminckii ATAAGCCAGATCTAGATCTAGAAAGGGTCTCCTTAGGAAGGAAATAGTGG Arborophila_ardens CTGCACAGTACTGTTTGTTACACAGGCATGCTGCAAATAGCTGAAAGGAA Arborophila_brunneopectus CTGCACAGTACTGTTTGTTACACAGGCATGCTGCAAATAGCTGAAAGGAA Anas_platyrhynchos CTGCACGGTGCTATTTGTCATACAGGCATGCTATAGACAGCTGGAAGGAA Arborophila_rufipectus CTGCACAGTACTGTTTGTTACACAGGCATGCTGCAAATAGCTGAAAGGAA Chrysolophus_amherstiae CTGCACAGTACTGCTTGTTACACAGGCATGCTGCAAATAGCTGAAAGGAA Gallus_gallus CTGCACAGTACTGTTTGTTACACAGGCATGCTGCAAATAGCTGAAAGGAA Lophophorus_lhuysii CTGCACAGTACTGTTTGTTACACACGCATGCTGCAAATAGCTGAAA---- Meleagris_gallopavo CTGCACAGTGCTGTTTGTTACACAGGCACGCTGCAAATAGCTGACAGGAA Phasianus_colchicus CTGCACAGTACTGTTTGTTACACAGGCATGCTGCAAATAGCTGAAAGGAA Pucrasia_macrolopha CTGCACAGTACTGTTTGTTACACAGGCATGCTGCAAATAGCTGAAAGGAA Syrmaticus_reevesii CTGCACAGTACTGTTTGTTACACAGGCATGCTGCAAATAGCTGAAAGGAA Tetraophasis_szechenyii CTGCACAGTACAGTTTGTTACACAGGCATGCTGCAAATAGCTGAAAGGAA Tragopan_temminckii CTGCATAGTACTGTTTGTTACACAGGCATGCTGCAAATAGCTGAAAGGAA Arborophila_ardens ACAGAGGGGCTTATACATTTGCAGCAGAGCCACCCTAGCAAGAGAAGCAG Arborophila_brunneopectus ACAGAGGGGCTTATACATTTGCAGCAGAGCCACCCTAGCAAGAGAAGCAG Anas_platyrhynchos ACAGAGGGG------CATTTGTGGCAGAGCCATCCTAGCAGGAGAAGGCT Arborophila_rufipectus ACAGAGGGGCTTATACATTTGCAGCAGAGCCACCCTAGCAAGAGAAGCAG Chrysolophus_amherstiae ACAGAGGGGCACATACATTTGTGGCAGAGCCACCCTAGCAAGAGAAGCAG Gallus_gallus ACAGAGAGGCACATACAATTGTGGCAGAGCCACCCTCGCAAGAGAAGCAG Lophophorus_lhuysii -CAGAGAGGCATATACATTTGTGGCAGAGCCAGCCTAGCAAGAGAAGCAG Meleagris_gallopavo ACAGAGGCGCATATACATTTGTGGCAGAGCCACTCTAGCAAGAGAAGCAG Phasianus_colchicus ACAGAGGGGCATATACACTTGTGGCAGAGCCACCCTAGCAAGAGAAGCAG Pucrasia_macrolopha ACAGAGGGGCACATACATTTGTGACAGAGCCACCCTAGCAAGAGAAGCAG Syrmaticus_reevesii ACAGAGGGGCATATACATTTGTGGCAGAGCCACCCTAGCAAGAGAAGCAG Tetraophasis_szechenyii ACAGAGGGGCATATACATTTGTGGCAGAGCCAACCTAGCAAGAGAAGCAG Tragopan_temminckii ACAGAGGGGCATATACATTTGTGGCAGAGCCACCCTAGCAAGAGAAGCAG Arborophila_ardens TTGGAATTTTCTTAGTCTATCAGTGCTTTTTACAGAATAGAAACACTCCT Arborophila_brunneopectus TTGGAATTTTCTTAGTCTATCAGTGCTTTTTACAGAATAGAAACACTCCT Anas_platyrhynchos TTGTAACTTTCTTGGTCTTTGAGGGCTTTTTGCAGGATGGAAATACTCCT Arborophila_rufipectus TTGGAATTTTCTTAGTCTATCAGTGCTTTTTACAGAATAGAAACACTCCT Chrysolophus_amherstiae TTGGAATTTTCTTAGTCTGTCAGGGCTTTTTACAGAATAGAAACACTCAT Gallus_gallus TTGGAATTTTCTCGGTCTATCAGGGCTTTTTACAGAACAGAAAAACTCCT Lophophorus_lhuysii TTGGAATTTTCTTAGTCTATCAGGGCTTTTTACAGAATAGAAACACTCAT Meleagris_gallopavo TTGGAATTTTCTTAGTCTGTCAGGGCTTTTTACAGAATAGAAACACTCAT Phasianus_colchicus TTGGAATTTTCTTAGTCTGTCAGGGCTTTTTACAGAATAGAAACACTCAT Pucrasia_macrolopha TTGGAATTCTCTTAGTCTGTCAGGGATTTT-ACAGAATGGAAACACTCAT Syrmaticus_reevesii TTGGAATTTTCTTAGTCTGTCAGGGCTTTTTACAGAATAGAAACACTCAT Tetraophasis_szechenyii TTGGAATTTTCTTAGTCTATCAGGGCTTTTTACAGAATAGAAACACTCAT Tragopan_temminckii TTGGAATTTTCTTAGTCCATCGGGGCTTTTTACAGAATAGAAACACTCAT Arborophila_ardens CTTTTAAGCACAGCTTCAGTGGGAACAGAACACAGATTTCAGGCCCTACC Arborophila_brunneopectus CTTTTAAGCACAGCTTCAGTGGGAACAGAACACAGATTTCAGGCCCTACC Anas_platyrhynchos CCTTTAAGCAAAGCTTCAGTAGGGACAATGCACAGATTTCAGGCCCCAGC Arborophila_rufipectus CTTTTAAGCACAGCTTCAGTGGGAACAGAACACAGATTTCAGGCCCTACC Chrysolophus_amherstiae CTTTTAAGCACAGCTTTAGTCGGGACAGAACACAGGTTTCAGGCCCTACC Gallus_gallus CTTTTAAGCACAGCTTCAGTGGGGACAGAACACAGATTTCAGGCCCTACC Lophophorus_lhuysii CTTTTAAGCAC-GCTTCAGTGGGGACAGAACACAGATTTCAGGCCCTACC Meleagris_gallopavo CTTTTAAGCACAGCTTCAGTGGGGACAGAACACAGATTTCAGGCCCTACC Phasianus_colchicus CTTTTAAGCACAGCTTCAGTGGGGACAG--------------GCCCTACC Pucrasia_macrolopha CTTTTAAGCACAGCTTCAGTGGGGACAGAACACAGATTTCAGGCCCTACC Syrmaticus_reevesii CTTTTAAGCACAGCTTCAGTGGGGACAGAACACAGGTTTCAGGACCTACC Tetraophasis_szechenyii CTTTTAAGCACAGCTTCAGTGGGGACAGAACACAGATTTCAGGCCCTACC Tragopan_temminckii CTTTTAAGCACAGCTTCAGTGGGGACAGAACACAGATTTCAGGTCCTACC Arborophila_ardens AGCTTAGATGACAAACAGAATGTGGAACCATTCAGCT-CAGCCTGTGCTC Arborophila_brunneopectus AGCTTAGATGACAAACAGAATGTGGAACCATTCAGCT-CAGCCTGTCCTC Anas_platyrhynchos AGCTCAAATAACAAGCAGAATGAGGCTTCCTTCAGCTCCAGTCTGTTCTT Arborophila_rufipectus AGCTTAGATGATAAACAGAATGTGGAACCATTCAGCT-CAGCCTGTCCTC Chrysolophus_amherstiae AGCGTAGATGACAAACAGAATGTGGAACCTTTCAGCTCCAGCCTGTCCTC Gallus_gallus AGCTTAGATGACAAACAGAATGTGGAACCCTTCAGCTCCAGCCTGGCCTC Lophophorus_lhuysii AGCTTAGATGACAAACAGAATGTGGAACCCTTCAGCTCCAACCTGTCCTC Meleagris_gallopavo AGTTTAGATGACAAACAGAATGTGGAACCCTTCAGCTCCAGCCTGTCCTC Phasianus_colchicus AGTTTAGATGACAAACAGAATGTGGAACCTTTCAGCTCCAGCCTGTCCTC Pucrasia_macrolopha AGCTTAGATGACAAACAGAATGTGGAACCCTTCAGCTCCAGCCTGTCCTC Syrmaticus_reevesii AGCTTAGATGACAAACAGAATGTGGAACCTTTCAGCTGCAACCTGTCCTC Tetraophasis_szechenyii AGCTTAGATGACAAACAGAATGTGGAACCCTTCAGCTCCAGCCTGTCCTC Tragopan_temminckii AGCTTAGATGACAAACAGAAGGTGGAACCCTTCAGCTCCAGCCTGTCCTC Arborophila_ardens ACACCCAGGTGTTCAGGAGCAGCTAGAACTGATTCAGAGCACCTGCACAA Arborophila_brunneopectus ACACCCAGGTGTTCAGGAGCAGCTAGAACTGATTCAGAGCACCTGCACAA Anas_platyrhynchos GTCCCCAACTGCTCAGGAGCAGTCAGAGCTGGCTCAGAGCACCTGCACAA Arborophila_rufipectus ACCCCCAGGTGTTCAGGAGCAGCTAGAACTGATTCAGAGCACCTGCACAA Chrysolophus_amherstiae ACACCCAGGTGCCCAGGAGCAGCTAGAGCTGAGTCAGAGCACCTGCACAA Gallus_gallus ACACCCAGGTGCTCAGGAGCAGCTAGAGCTGATTCAGAGCACCTGCACAA Lophophorus_lhuysii ACACCCAAGTGCTCAGGGGCAGCTAGAGCTGATTCAGAGCACCTGCACAA Meleagris_gallopavo ACACCCAGGTGCTCAGGAGCAGCTAGAGCTGATTCAGAGCACCTCCACAA Phasianus_colchicus ACACCCAGGTGCTCAGGAGCAGCTGGAGCTGATTCAGAGCGCCTGCACAA Pucrasia_macrolopha ACACCCAGGTGCTCAGGAGCAGCTAGAGCTGATTCAGAGCACCTGCACAA Syrmaticus_reevesii ACACCCAGGTGCTCAGGAGCAGCTGGAGCTGATTCAGAGCGCCTGCACAA Tetraophasis_szechenyii ACACCCAAGTGCTCAGGATCAGCTAGAGCTGATTCAGAGCACCTGCACAA Tragopan_temminckii ACACCCAGGTGCTCAGGAGCAGCTAGAGCTGATTCAGAGCACCTGCACAA Arborophila_ardens GCAATTCTGTGAAACCCCACAGCTACAATGCTGTTTCCTGAAAAAA-TGA Arborophila_brunneopectus GCAATTCTGTGAAACCCCACAGCTACAATGCTGTTTCCTGAAAAAA-TGA Anas_platyrhynchos GGGGTTTTGCAAAACTCCACAGCCACAATACTGTTACCCACATAGAAGGA Arborophila_rufipectus GCAATTCTGTGAAACCCCACAGCTACAATGCTGTTTCCTGAAAAAA-TGA Chrysolophus_amherstiae G---TTCTGTGAAACC-CACAGCTACAGTGCTGTTTCCTGAAAAAA-TGA Gallus_gallus GCAGTTCTGTGAAACCCCACAGCTACAGTGCTGTTTCCTGCAAAAAATGA Lophophorus_lhuysii GCAGTTCTGTGAAACCCCACAGCTACAATGCTGTTTCCTGAAAAAAATGA Meleagris_gallopavo GTAGTTCTGTGAAACCCCACAGCTACAATGCTGTTTCCTGAAAAAAATGA Phasianus_colchicus G---TTCTGTGAAGCCTCCCAGCTACAATGCTGTTTCCTGAAAAAAATGA Pucrasia_macrolopha GCAGTTCTGTGAAACCCCACAGCTACAATGCTGTTTCCTGAAAAAAAAGA Syrmaticus_reevesii G---TTCTGTGAAGCCCCACAGCTACAATGCCGTTTCCTGAAAAAAATGA Tetraophasis_szechenyii GCAGTTCTGTGAAACCCCACAGCTACAATGCTGTTTCCTGAAAAAAATGA Tragopan_temminckii GCAGTTCTGTGAAACCCCACAGCTACAATGCTGTTTCCTGAAAAAAATGA Arborophila_ardens ACGATATC-ACAGCGGAC-CTGGGACACGGTGCTGCAGGCCATACAGTCG Arborophila_brunneopectus ACGATATCAACAGCGGACACTGGGACACGGTGCTGCAGGCCATACAGTCG Anas_platyrhynchos GCGACATCAACAGCGGGCACTGGGACACGGTGCTGCAGGCCATACAGTCG Arborophila_rufipectus ACGATATCAACAGCGGACACTGGGACACGGTGCTGCAGGCCATACAGTCG Chrysolophus_amherstiae ACGACATCAACAGCGGGCACTGGGACACGGTGCTGCAGGCCATACAGTCG Gallus_gallus GCGACATCAACAGCGGGCACTGGGACACGGTGCTGCAGGCCATACAGTCG Lophophorus_lhuysii ACGACATCAACAGCGGGCACTGGGACACGGTGCTGCAGGCCATACAGTCG Meleagris_gallopavo ACGACATCAACAGCGGGCACTGGGACACGGTGCTGCAGGCCATACAGTCG Phasianus_colchicus AGGGCACTCAT-AGCGGGCCTGGGACACGGTGCTGCAGGCCATACAGTCG Pucrasia_macrolopha ACGACATCAACAGTGGGCACTGGGACACGGTGCTGCAGGCCATACAGTCG Syrmaticus_reevesii ATGGCACTAAC-GCGGGCACTGGGACACGGTGCTGCAGGCCATACAGTCG Tetraophasis_szechenyii ACGACATCAACAGCGGGCACTGGGACACGGTGCTGCAGGCCATACAGTCG Tragopan_temminckii ACGACATCAACAGCGGGCACTGGGACACGGTGCTGCAGGCCATACAGTCG Arborophila_ardens CTGAAGCTGCCCGACAAGACTCTCATCGATCTTTATGAGCAGGTGGGCAG Arborophila_brunneopectus CTGAAGCTGCCCGACAAGACTCTCATCGATCTTTATGAGCAGGTGGGCAG Anas_platyrhynchos CTGAAGCTGCCCGACAAGACCCTCATTGACCTCTACGAGCAGGTGGGCAG Arborophila_rufipectus CTGAAGCTGCCCGACAAGACCCTCATCGATCTTTATGAGCAGGTGGGCAG Chrysolophus_amherstiae CTGAAGCTGCCCGACAAGACCCTCATCGACCTCTACGAGCAGGTGGGCAG Gallus_gallus CTGAAGCTGCCCGACAAGACCCTTATCGACCTCTACGAGCAGGTGGGCAG Lophophorus_lhuysii CTGAAGCTGCCCGACAAGACCCTCATCGACCTCTACGAGCAGGTGGGCAG Meleagris_gallopavo CTGAAGCTGCCCGACAAGACCCTCATCGACCTGTACGAGCAGGTGGGCAG Phasianus_colchicus CTGAAGCTGCCCGACAAGACCCTCATCGACCTCTACGAGCAGGTGGGCAG Pucrasia_macrolopha CTGAAGCTGCCCGACAAGACCCTCATCGACCTCTACGAGCAGGTGGGCGG Syrmaticus_reevesii CTGAAGCTGCCCGACAAGACCCTCATCGACCTCTACGAGCAGGTGGGCAG Tetraophasis_szechenyii CTGAAGCTGCCCGACAAGACCCTCATCGACCTCTACGAGCAGGTGGGCAG Tragopan_temminckii CTGAAGCTGCCCGACAAGACCCTCATCGACCTCTACGAGCAGGTGGGCAG Arborophila_ardens CATGAGCAGCATGCGACCTTCTCTAGGCCTCTTCTGCTTTAAACGTGCTC Arborophila_brunneopectus CATGAGCAGCATGCGACCTTCTCTAGGCCTCTTCTGCTTTAAACGTGCTC Anas_platyrhynchos CAAGAGCCGCTTCCGACGAACTTATGCTCTATACTTCTTGCTGAGTGATC Arborophila_rufipectus CATGAGCAGCATGCGACCTTCTCTAGGCCTCTTCTGCTTTAAACGTGTTC Chrysolophus_amherstiae CACGAGCAGCGTGTGACTTTCTCTAGGCCTCTTCTGTTTTGCACGTGTTC Gallus_gallus CACGAGCAGCGTGCGACCTTCTCTAGGCCTTTTCTACTTTACATGTGCTC Lophophorus_lhuysii CACGAGCAGCGTGCGGCTTTCTCTAGGCCTCTTCTGCTTTACCCGTGCTC Meleagris_gallopavo CACGAGCAACGTGCGACTTTCTCTAGGCCTCTTCTGCTTTACACGTGCTC Phasianus_colchicus CACGAGCAGCGTGTGGCTTTCTCTAGGCCTCTTCTGTTTTGCACGTGTTC Pucrasia_macrolopha CATGAGCGGCGTGCAACTTTCTATAGGCCTCTTCTCCTTCACATGTGCTC Syrmaticus_reevesii CACGAGCAGCGTGCGACTTTCTCTAGGCCTCTTCTGCTTTACACGTGTTC Tetraophasis_szechenyii CACGAGCAGCGTGCGACTTTCTCTAGGCGTCTTCTGCTTTACCCGTGCTC Tragopan_temminckii CACGAGCAGCGTGCGACTTTCTCTAGGCCTCTTCTGCTTTACACGTGTTC Arborophila_ardens TCTTATAGAGCCTTT-----------------------TGGGTGCATCAT Arborophila_brunneopectus TCTTATAGAGCCTTT-----------------------TGGGTGCATCAT Anas_platyrhynchos TCAATTAGACCCTGT-------------------------------CACT Arborophila_rufipectus TC--ATAGAACCTTT-----------------------TGGGCCCATCAT Chrysolophus_amherstiae TCTTATAGAACCTTTCAGGCACCACTGAGTCCAACCTCTGGCTTCATCAT Gallus_gallus TCTTCTAGAGCCTTT------------------------------ATCAT Lophophorus_lhuysii TCTTATGGAACCTTTCAGGCACCACTGAGTCCAACCTCTGGCTCCATCAT Meleagris_gallopavo TCTTATAGAACCTTTCAGGCACCA---------ACCTCTGGCTCCATCGT Phasianus_colchicus TCTTATAGAACCTCTCTGGCACCACTGAGTCCAACCTCAGGCTCCATCAT Pucrasia_macrolopha TCTTATAGAACCTTTCAGACGCCACTGAGTCCAACCTCTGGCTCCATCAT Syrmaticus_reevesii TCTTATAGAACCTCTCAGGCACCACTGAGTCCAACCTCTGGCTCCATCAT Tetraophasis_szechenyii TCTTGTAGAACCTTT--GGCACCACTGAGTCCAACCTCTGGCTCCATTAT Tragopan_temminckii TCTTATAGAACCTCTCGGGCACCACCGAGTCCAACCTCTGGTTGCATCAT Arborophila_ardens GGTTTATCTGTGCTGATGCAGATGCTAATCCCTTGTTGCAGGTTGTGCTG Arborophila_brunneopectus GGTTTATCTGTGCTGATGCAGATGCTAATCCCTTGTTGCAGGTTGTGCTG Anas_platyrhynchos GGTTAAACTGTGCTGATGCAGAT--TAATCCCT----GCAGGTCGTGCTG Arborophila_rufipectus GGTTTATCTGTGCTGATGCAGATGCTAATCCCTTGTTGCAGGTTGTGCTG Chrysolophus_amherstiae GGTTCATCTTCGCTGATGCAGATGCTAATCCCTTGTTGCAGGTTGTGCTG Gallus_gallus GGTTCATCTTTGCTGATGCAGATGCTAATCCCTCGTTGCAGGTTGTGCTG Lophophorus_lhuysii GGTTCATCTTTGCTGATGCAGATACTAATCCCTTGTTGCAGGTTGTGCTG Meleagris_gallopavo GGTTCATCTTTGCTGATGCAGATGCTAATCCCTTGTCGTAGGTTGTGCTG Phasianus_colchicus GGTTCATCTTTGCTGATGCAGATGCTAATCCCTTGTTGCAGGTTGTGCTG Pucrasia_macrolopha GGTTCATCTTTGCTGATGCAGATGCTAATCCCTTGTTGCAGGTTGTGCTG Syrmaticus_reevesii GGTTCATCTTCGCTGATGCAGATGCTAATCCCTTGTTGCAGGTTGTGCTG Tetraophasis_szechenyii GGTTCATCTTTGCTGATGC------TAATCCCTTGTTGCAGGTTGTGCTG Tragopan_temminckii GGTTCATCTTTGCTGATGCAGATGCTAATCCCTTGTTGCAGGTTGTGCTG Arborophila_ardens GAGCTGATTGAGCTCCGGGAGCTGGGTGCTGCCAGGTCCCTCCTCAGGCA Arborophila_brunneopectus GAGCTGATTGAGCTCCGGGAGCTGGGTGCTGCCAGGTCCCTCCTCAGGCA Anas_platyrhynchos GAGCTTATCGAGCTGCGGGAGCTGGGTGCTGCCCGCTCCCTGCTGAGGCA Arborophila_rufipectus GAGCTGATTGAGCTCCGGGAGCTGGGTGCTGCCAGGTCCCTCCTCAGGCA Chrysolophus_amherstiae GAGCTGATTGAGCTCCGGGAGCTGGGTGCTGCCAGGTCCCTCCTCAGGCA Gallus_gallus GAGCTAATTGAGCTCCGGGAGCTGGGTGCTGCCAGGTCCCTCCTCAGGCA Lophophorus_lhuysii GAGCTGATTGAGCTCCGGGAGCTGGGGGCTGCCAGATCCCTCCTCAGGCA Meleagris_gallopavo GAGCTGATTGAGCTCCGGGAGCTGGGTGCTGCCAGGTCCCTCCTCAGGCA Phasianus_colchicus GAGCTGATTGAGCTCCGGGAGCTGGGTGCTGCCAGGTCCCTCCTCAGGCA Pucrasia_macrolopha GAGCTGATTGAGCTCCGCGAGCTGGGTGCTGCCAGGTCCCTCCTCAGGCA Syrmaticus_reevesii GAGCTGATTGAGCTCCGGGAGCTGGGTGCTGCCAGGTCCCTCCTCAGGCA Tetraophasis_szechenyii GAGCTGATTGAGCTCCGGGAGCTGGGTGCTGCCAGGTCCCTCCTCAGGCA Tragopan_temminckii GAGCTGATTGAGCTCCGGGAGTTGGGTGCTGCCAGGTCCCTCCTCAGGCA Arborophila_ardens GACAGATCCCATGATCATGCTAAAACAGACCCAGCCAGAGCGGTACATCC Arborophila_brunneopectus GACAGATCCCATGATCATGCTAAAACAGACCCAGCCAGAGCGGTACATCC Anas_platyrhynchos GACGGATCCCATGATCATGCTGAAGCAGACACAGCCAGAGCGGTACATCC Arborophila_rufipectus GACAGATCCCATGATCATGCTAAAACAGACCCAGCCAGAGCGGTACATCC Chrysolophus_amherstiae GACAGATCCCATGATCATGCTGAAGCAGACTCAGCCAGAGCGGTACATTC Gallus_gallus GACAGATCCCATGATCATGCTGAAGCAGACTCAGCCAGAGCGGTACATCC Lophophorus_lhuysii GACAGATCCCATGATCATGCTGAAGCAGACTCAGCCAGAGCGGTACATTC Meleagris_gallopavo AACAGATCCCATGATCATGCTGAAGCAGACTCAGCCAGAGCGGTACATTC Phasianus_colchicus GACAGATCCCATGATCATGCTGAAGCAGACTCAGCCAGAGCGGTACATTC Pucrasia_macrolopha GACAGATCCCATGATCATGCTGAAGCAGACTCAGCCAGAGCGGTACATTC Syrmaticus_reevesii GACAGATCCGATGATCATGCTGAAGCAGACTCAGCCAGAGCGGTACATTC Tetraophasis_szechenyii GACAGATCCCATGATCATGCTGAAGCAGACTCAGCCAGAGCGGTACATTC Tragopan_temminckii GACAGATCCCATGATCATGCTGAAGCAGACTCAGCCAGAGCGGTACATTC Arborophila_ardens ACCTCGAAAACCTTCTGGCTAGATCTTACTTGAGGCCATGAAAGCAATGG Arborophila_brunneopectus ACCTCGAAAACCTTCTGGCTAGATCTTACTTGAGGCCATGAAAGCAATGG Anas_platyrhynchos ACCTGGAAAACCTTCTGGCCAGGTCTTACTTTATGCCATGAAAGCAACAG Arborophila_rufipectus ACCTCGAAAACCTTCTGGCTAGATCTTACTTGAGGCCATGAAAGCAATGG Chrysolophus_amherstiae ACCTTGAAAACCTTCTGGCCAGATCTTACTTGAGGGCATGAAAGCAAAGG Gallus_gallus ACCTTGAAAACCTTCTGGCCAGATCTTACTTAAAGCCATGAAAGCAATGG Lophophorus_lhuysii ACCTTGAAAACCTTCTGGCCAGATCTTACTTGAGGCCATGAAAGCAATGG Meleagris_gallopavo ACCTTGAAAACCTTCTGGCCAGATCTTACTTGAGGCCATGAAAGCAATGG Phasianus_colchicus ACCTTGAAAACCTTCTG-CCAGATCT-ACTAGAGGGCATGAAAGCAATGG Pucrasia_macrolopha ACCTTGAAAACCTTCTGGCCAGATCTTACTTGAGGCCATGAAAGCAACGG Syrmaticus_reevesii ACCTTGAAAACCTTCTG-CCAGATCT-ACTAGAGGGCATGAAAGCAAAGG Tetraophasis_szechenyii ACCTTGAAAACCTTCTGGCCAGATCTTACTTGAGGCCATGAAAGCAATGG Tragopan_temminckii ACCTTGAAAATCTTCTGGCCAGATCTTATTTGAGGCCATGAAAGCAACGG Arborophila_ardens CCTTGGCAGACTCTGCCTGAGGTTTCTTAAACACATTACAGGATGCAGAA Arborophila_brunneopectus CCTTGGCAGACTCTGCCTGAGGTTTCTTAAACACATTACAGGATGCAGAA Anas_platyrhynchos CCTTGACAGACTCAGCCTGAGGTTTCTTAAATGCATTATAGGATGTAGAA Arborophila_rufipectus CCTTGGCAGACTCTGCCTGAGGTTTCTTAAACACATTACAGGATGCAGAA Chrysolophus_amherstiae TCTTGGCAGACGCTGCCTGAGGTTTCTTAAATGCATTACAGGATGCAGAA Gallus_gallus CCTTGGCAGACTCTGCCTGAGGTTTCTTAAATGCATTACAGGATGCAGAA Lophophorus_lhuysii CCTTGGCAGACTCTGCCTGAGGTTTCTTAAATGCATTACAGGATGCAGAA Meleagris_gallopavo CCTTGGCAGACTCTGCCTGAGGTTTCTTAAATGCATTACAGGATGCAGAA Phasianus_colchicus CCTTGGCAGACGCTGCCTGAGGTTTCTTAAATGCATTACAGGATGCAGAA Pucrasia_macrolopha CCTTGGCAGACTCTGCCTGAGGTTTCTTAAATGCATTACAGGATGCAGAA Syrmaticus_reevesii CCTTGGCAGACGCTGCCTGAGGTTTCTTAAATGCATTACAGGATGCAGAA Tetraophasis_szechenyii CCTTGGCAGACTCTGCCTGAGGTTTCTTAAATGCATTACAGGATGCAGAA Tragopan_temminckii CCTTGGCAGACTCTGCCTGAGGTTTCTTAAATGCGTTACAGGATGCAGAA Arborophila_ardens AATAACAAGATTAAACCTGGGTAAAATGCATAGCCCAGGGACTAAACCAG Arborophila_brunneopectus AATAACAAGATTAAACCTGGGTAAAATGCATAGCCCAGGGACTAAACCAG Anas_platyrhynchos AGTAACAAGATTAAATCTGGGTAAAATGCATAGCCCAGGGACCAAACAAG Arborophila_rufipectus AATAACAAGATTAAGCCTGGGTAAAACGCATAGCCCAGGGACTAAACCAG Chrysolophus_amherstiae AGTAACAAGATTAAACCAGGGTAAAATGCATAGCCCAGGGACTGAACAAG Gallus_gallus AGTAACAAGATTAAACCTGGGTAAAATGCATAGCCCAGGGACTAAACAAG Lophophorus_lhuysii GGTAACAAGATTAAACCAGGGTAAAATGCACAGCCCAGGGACTAAACAAG Meleagris_gallopavo AGTAACAAGATTAAACCAGGGTAAAATGCATAGCCCAGGGACTAAACAAG Phasianus_colchicus AGTAACAAGATTAAACCAGGGTAAAATGCATAGCCCAGGGACTAAACAAG Pucrasia_macrolopha AGTAACAAGATTAAACCAGGGCAAAATGCATAGCCCAGGGACTAAACAAG Syrmaticus_reevesii AGTAACAAGATTAAACCAGGGTAAAATGCATAGCCCAGGGACTAAACAAG Tetraophasis_szechenyii AGTAACAAGATTAAACCAGGGTAAAATGCATAGCCCAGGGACTAAACAAG Tragopan_temminckii AGTAACAAGATTAAACCAGGATAAAATGCATAGCCCAGGGACTAAACAAG Arborophila_ardens CATCTGCACTGTTTACTGAGAGCAGGGA-------ACACAAAGGCAAAAG Arborophila_brunneopectus CATCTGCACTGTTTACTGAGAGCAGGGA-------ACACAAAGGCAAAAG Anas_platyrhynchos CATCTGCACTGTTTACTGAGAGCAGGGACTGAGAAACACAAAGGGAAAAG Arborophila_rufipectus CATCTGCACTGTTTACTGAGAGCAGGGA-------ACACAAAGGCAAAAG Chrysolophus_amherstiae CATCTGCACTGTTTACTGAGAGCAGGGAGCAGGGAACATAAAG-TAAAAG Gallus_gallus CATCTGCACTGTTTACTGAGAGCAGGGA-------ACATAAAGGTAAAAG Lophophorus_lhuysii CATCTGCACTGTTTACTGAGAGCAGGGAGCAGGGAACATAAAGGTAAAAG Meleagris_gallopavo CATCTGCACTGTTTACTGAGAGCAGGGAGCAGGGAACGTAAAGGTAAAAG Phasianus_colchicus CATCTGCACTGTTTACTGAGAGCAGGGA-------ACATAAAGGTAAAAG Pucrasia_macrolopha CATCTGCACTGTTTACTGAGAGCAGGGAGCAGGGAACATAAAGATAAAAG Syrmaticus_reevesii CATCTGCACTGTTTACTGAGAGCAGGGAGCAGGGAACATAAAGGTAGAAG Tetraophasis_szechenyii CATCTGCACTGTTTACTGAGAGCAGGGAGCAGGGAACATAAAGGTAAAAG Tragopan_temminckii CATCTGCACTGTTTACTGAGAGCAGGGAGCAGGGAACATAAAGGTAAAAG Arborophila_ardens GTGATTCGGTACGATTGAGACCACACA----------GCCCAGCATCCTC Arborophila_brunneopectus GTGATTCGGTACGATTGAGACCACACA----------GCCCAGCATCCTC Anas_platyrhynchos GTGATTTGGTACTGTGGAGACAGCACA---------------GCATCCTC Arborophila_rufipectus GTGATTCGGTACGATTGAGACCACACA----------GCCCAGCATCCTC Chrysolophus_amherstiae GTGATTCAGTACTATAGAGACTGCACAGGTCCGCTCAGCCCAGTATCCTC Gallus_gallus GTGATTCAGTACTATAGAGACCGCACAGATCCACTCAGCCCAGCATCCTC Lophophorus_lhuysii GTGATTCGGTACTATAGAGACTGCACAGGTC-ACTCAGCCCAGTATTCTC Meleagris_gallopavo GTGATTCAGTACTATAGAGACTGCACAGGTCCACACAACCCAGTATCCTC Phasianus_colchicus GTGATTCAGTACTATAGAGACTGCACAGGTCCGCTCAGCCCAGTATCCTC Pucrasia_macrolopha GTGATTCGGTACTATAGAGACTGCACATGTCCACTCTGCCCAGTATCCTC Syrmaticus_reevesii GTGATTCAGTACTATAGAGACTGCACAGGTCCACTCAGCCCAGTATCCTC Tetraophasis_szechenyii GTGATTTGGTACTATAGAGACTGCACAGGTGCACTCAGCCCAGTATTCTC Tragopan_temminckii GTGATTTGATACTATAGAGACTGCACAGGTCCACTCAGCCCAGTATCCTC Arborophila_ardens TCATAAAGGCTTATTCTCCCTACCTAATCCTTTGCTTCTGCACTTTCCTG Arborophila_brunneopectus TCATAAAGGCTTATTCTCCCTACCTAATCCTTTGCTTCTGCACTTTCCTG Anas_platyrhynchos TCATGAGGGCTCATTCTCCCTATCTAATACATCACTTCTGCACTTTTCTT Arborophila_rufipectus TCATAAAGGCTTATTCTCCCTACCTAATCCTTTGCTTCTGCACTTTCCTG Chrysolophus_amherstiae TCACAAAGGCTCATTCTCCCTACCTAATCCTTTGCTCCTGCGTTTTTCTT Gallus_gallus TCATAAAGGCCCATTCTCCCTACCTAATCCTTTGCTCCTGCATTTTTCTT Lophophorus_lhuysii TCATAAAGGCTCATTCTCCCTACCTAATCCTTTGCTCCTGCATTTTTCTT Meleagris_gallopavo TCATAAAGGCTCATTCTCCCTACCTAATCCTTTGCTCCTGCATTTTTCTT Phasianus_colchicus TCACAAAGGCTCATTCTCCCTACCTAATCCTTTGCTCCTGCGTTTTTCTT Pucrasia_macrolopha TCATAAAGGCTCATTCTCCCTACCTAATCCTTTGCTCCTGCATTTTTCTT Syrmaticus_reevesii TCACAAAGGCTCATTCTCCCTACCTAATCCTTTGCTCCTGCGTTTTTCTT Tetraophasis_szechenyii TCATAAAGGCTCATTCTCCCTACCTAATCCTTTGCTTCTGCATTTTTCTT Tragopan_temminckii TCATAAAGGCTCATTCTCCCTACCTAATCCTTTGCTCCTGCATTTTTCTT Arborophila_ardens GCTGTATGACACAGCACAGAAAATATCAATAAACTTCGCTTGATGCAACT Arborophila_brunneopectus GCTGTATCACACAGCACAGAAAATATCAATAAACTTCACTTGATGCAACT Anas_platyrhynchos GCTGCGTGATGCAGAACAGAAAATATCAACAAACTCTACTTAATGGAACT Arborophila_rufipectus GCTGTATGACACAGCACAGAAAATATCAATAAACTTCACTTGATGCAACT Chrysolophus_amherstiae GC--------ACAGTACAGAAAATATCAATAAACTCCACTTAATGCAACC Gallus_gallus GCTGTATAACACAGTAAAGAAAATATCAATAAACTCCACTTGATGCAACC Lophophorus_lhuysii GCTGTATGACACAGTACAGAAAATATCAATAAACTCCACTTGATGCAACC Meleagris_gallopavo GCTGTATGACACAGTACAGAAAATATCAATAAACTCCACTTGATGCAACC Phasianus_colchicus GC--------ACAGTACAGAAAATATCAATAAACTCCACTTAATGCAACC Pucrasia_macrolopha GCTGTATGACACAGTACAGAAAATATCAATAAACTCCACTTGATGCAAAC Syrmaticus_reevesii TC--------ACAGTACAGAAAATATCAATAAACTCCACTTAATGCAACC Tetraophasis_szechenyii GCTGTATGACACAGTACAGAAAATATCAATAAACTTCACTTGATGCAACC Tragopan_temminckii GCTGTATGACACAGTACAGAAAATATCAATAAACTCCACTTGAAGCAACC Arborophila_ardens CTTGGCAGGCACCGCAGACGGTTTCCACTGTTGGAGGTCACTTTACCAGA Arborophila_brunneopectus CTTGGCAGGCACCGCAGACGGTTTCCACTGTTGGAGGTCACTTTACCAGA Anas_platyrhynchos CTTGGCCTACACTACAGACATCAGCCTCCACCAGAGGCCACA--ACTAGA Arborophila_rufipectus CTTGGCAGGCACCGCAGACGGTTTCCACTGTTGGAGGTCACTTTACCAGA Chrysolophus_amherstiae CTTGGCAGACACTGCAGAGATTTTCCACTGTTGGAGGTCACTTTACCAGA Gallus_gallus CTTGGCAGACACTGCAGAGATTTTCCACTGTTGGAGGTCACTTTACCAGA Lophophorus_lhuysii CTTGGCAGACACTGCAGAGATTTCCCACTGTTGGAGGTCACTTTACCAGA Meleagris_gallopavo CTTGGCAGACACTGCAGAGATTTTCCACTGTTGGAGGTCACTTTACCAGA Phasianus_colchicus CTTGGCAGACACTGCAGAGATTTTCCACTGTTGGAGGTCACTTTACCAGA Pucrasia_macrolopha CTTGGCAGACGCTGCAGAGATTTTCCACTGTTGGAGGTCACTTTACCAGA Syrmaticus_reevesii CTTGGCAGACACTGCAGAGATTTTCCACTGTTGGAGGTCACTTTACCAGA Tetraophasis_szechenyii CTTGGCAGACACTGCAGAGATTTTCCACTGTTGGAGGTCACTTTACCAGA Tragopan_temminckii CTTGGCAGACACTGCAGAGATTTCCCACTGTTGGAGGTCACTTTACCAGA Arborophila_ardens ACCTGCTGGTTCACGTACCAGCAGCTGCTCTGCTGGGGCTAATATGTCCA Arborophila_brunneopectus ACCTGCTGGTTCACATACCAGCAGCTGCTCTGCTGGGGCTAATATGTCCA Anas_platyrhynchos GCTCACTGGTTCAGGTACCAGCAGCTGCCCTGCTGAGCCTAAT----TCA Arborophila_rufipectus ACCTGCTGGTTCACGTACCAGCAGCTGCTCTGCTGGGGCTAATATGTCCA Chrysolophus_amherstiae ACTTGCTGGTTCATGTACCAGCAGCTGCTCTGCTGGGGCTAATATGTCCA Gallus_gallus ACTTGCTAGTTCAAGTACCAGCAGCTGCTCTGCTGGGGCTAATATGTCCA Lophophorus_lhuysii ACTTGCTGGTTCATGTACCAGCAGCTGCTCTGCTGGGGCTAATACGTCCA Meleagris_gallopavo ACTTGCTGGTTCATGTACCAGCAGCTGCTCTGCTGGGGCTAATATGTCCA Phasianus_colchicus ACTTGCTGGTTCATGTACCAGCAGCTGCTCTGCTGGGGCTAATATGTCCA Pucrasia_macrolopha ACTTGCTGGTTCATGTACCAGCAGCTGCTCTGCTGGGGCTAATATGTCCA Syrmaticus_reevesii ACTTGCTGGTTCATGTACCAGCAGCTGCTCTGCTGGGGCTAATATGTCCA Tetraophasis_szechenyii ACTTGCTGGTTCACATACCAGCAGCTGCTCTGCTGGGGCTAATATGTCCA Tragopan_temminckii ACTTGCTGGTTCATGTACCAGCAGCTGCTCTGCTGGGGCTAATATGTCCA Arborophila_ardens GCTTTTCAAGCAGGCTTGCAAGACTATATGAAGCTTTTGATCACACCGGC Arborophila_brunneopectus GCTTTTCAAGCAGGCTTGCAAGACTATATGAAGCTTTTGATCACACTGGC Anas_platyrhynchos GCTTTTCAAGCAGGCTTTGAAGACTGTGTTGAGCTTTTGATTGCACTGGC Arborophila_rufipectus GCTTTTCAAGCAGGCTTGCAAGACTATATGAAGCTTTTGATCACACTGGC Chrysolophus_amherstiae GCTTTTCAATCCGGCTTGCAAGACAGTATGGAGCTTTTGATCACACTGGC Gallus_gallus GCTTTTTAAGTGGGCTTGCAAGACCGTATGGAGCTTTTCATCACACTGGC Lophophorus_lhuysii GCTTTTCAAGCAGGCTTGCAAGACTGTATGGAGCTTTTGATCACACTGGC Meleagris_gallopavo GCTTTTCAGTCAGGCTTGCAAGACTGTATGGAGCTTTTGATCACACTGGC Phasianus_colchicus GCTTTTCAATCTGGCTTGCAAGACTGTATGGAGCTTTTGATCACACTGGC Pucrasia_macrolopha GCTTTTCAATCAGGCTTGCAAGACTGCATGGAGCTTTTGATCACACTGGC Syrmaticus_reevesii GCTTTTCAATCCGGCTTGCAAGACTGTATGGAGCTTTTGATCACACTGGC Tetraophasis_szechenyii GCTTTTCAAGCAGGCTTGCAAGACTGTATGCAGCTTTTGATCGCACTGGC Tragopan_temminckii GCTTTTCAAGCAGGCTTGCAAGACTGTATGGAGCTTTTGATCGCACTGGC Arborophila_ardens TAGACCGTTGTTGGTATCAGAACTAACTTAACACTAGCTCGTGTATTTGG Arborophila_brunneopectus TAGACCGTTGTTGGTATCAGAACTAACT-AACACTAGCTCGTGTATTTTG Anas_platyrhynchos CAGACTGCTGCTGGTATCGGAGCTGACTTAACACCAAAGCTTGGATTTTG Arborophila_rufipectus TAGACCGTTGTTGGTATCAGAACTAACT-AACACTAGCTCGGGTATTTGG Chrysolophus_amherstiae TAGACTGCTGTTGGTATCAGAACTGACTCAACACTAGCGCGTGTATTTTG Gallus_gallus TAGACTGCTGTTGATATCAGAATTGACTTAACACTACAGCATGTATTTTG Lophophorus_lhuysii TAGACTGCTGTTGGTATCAGAACTGACTTAACACTGGCGCATGTATTTTG Meleagris_gallopavo TAGACTGCTGTTGGTATCAGAACTGACTTAGCACTAGTGCATGCATTTTG Phasianus_colchicus TAGACTGCTGTTGGTATCAGAACTGACTTAACACAAGTGCATGTATTTTG Pucrasia_macrolopha TAGACTGCTGTTGGTATCAGAACTGACTTAACAGTAGCGCGTGTATTTTG Syrmaticus_reevesii TAGACTGCTGTTGGTATCAGAACTGACTTAACACAAGTGCATGTATTTTG Tetraophasis_szechenyii TAGACTGCTGTTGGTATCAGAACTGACTTAACACTAGCGCATGTATTTGG Tragopan_temminckii TAGACTGCTGTTGGTATTAGAACTGACTTAACACTAGTGTGTGTATTTGG Arborophila_ardens GTATCCCCAAGAATGTCACCGAGCTGTGAGTGCATTGCCAAGGGTCTGCC Arborophila_brunneopectus GTATCCCCCAGAATGTCACCGAGCTGTGAGTACATTGCCAAGGATCTGCC Anas_platyrhynchos GTATCCCCAAGAATGTCACTGAGCTGTGAGTACATTGCCAATTTTCTGCC Arborophila_rufipectus GTATCCCCAAGAATGTCACCGAGCTGTGAGTGCATTGCCAAGGGTCTGCC Chrysolophus_amherstiae GTATCCCCAAGAATGTCACCGAGCTGTGAGTGCATTGCCAAGGGTCTGCC Gallus_gallus GTATCCCGCCAAATGTCACCGAGCTGTGAGTGCATTGCCAAGGGTCTGCC Lophophorus_lhuysii GTATCCCC-AGAATGTCACCGAGCTGTGAGTACATTGCCAAGGATCTGCT Meleagris_gallopavo GTATCCCCAAGAATGTCACCGAGCTGTGAGTACATTGCCAAGGGTCTGCC Phasianus_colchicus GTATCCCCAAGAATGTCACCGAGCTGTGAGTGCATTGCCAAGGGTCTGCC Pucrasia_macrolopha GTATCCCCCAGAATGTCACCGAGCTGTGAGTGCATTGCCAAGGGTCTGCT Syrmaticus_reevesii GTATCCCCAAGAATGTCACCGAGCTGTGAGTGCATTGCCAAGGGTCTGCC Tetraophasis_szechenyii GTATCCCCAAGAATGTCACCGAGCTGTGAGTGCATTGCCAAGGGTCTGCC Tragopan_temminckii GCATCCCCAAGAACGTCACGGAGCTGTGAGTGCCGCGTCGAGGGGCTCCC Arborophila_ardens CTCCTCCCCCTGCTGCTGCTTTGCGGGCAGGGGTCTGTGCCGCAGGGTGC Arborophila_brunneopectus CTCCTCCCTCCGCTGATGCCTTGTGGGCAGGGGTCTCTGCTGCAGGGTAC Anas_platyrhynchos CTCCTCCCCCTGCTGATGCCTTGTGGGCAGGGGTCTCTGCTGCAGGGTAC Arborophila_rufipectus TTCCTCCCCCTGCTGCTGCTTTGTGGGCAGGGGTCTGTGCTGCAGGGTAC Chrysolophus_amherstiae TTCCTCCCCCTGCTGCTGCTTTGTGGGCAGGGGTCTGTGCTGCAGGGTAC Gallus_gallus CTCCTCCCCCTGCTGCTGCTTTGTGGGCGGGGGTCTGTGCCGCAGGGTAC Lophophorus_lhuysii CTCCTCCCCCCGCCGATGCCTTGTGGGCGGGGGTCTCTGCTGCAGGGTAC Meleagris_gallopavo CTCCTCCCCCTGCTGCTGC-TCGTGGGCAGGGGTCTGTGCTGCAGGGTAC Phasianus_colchicus CTCCTCTCCCTGCTGCTGCTTTGTGGACAGGGGTCTGTGCCACAGGGTGC Pucrasia_macrolopha CTCCTCCCCCTGCAGCTGCTTTGTGGGCAGGGGTCTGTGCCGCAGGGTGC Syrmaticus_reevesii CTCCTCCCCCTGCTGCTGCTTTGTGGGCAGGGGTCTGTGCCGCAGGGTGC Tetraophasis_szechenyii CTCCTCTCCCTGCTGCTGCTTTGTGGACAGGGGTCTGTGTCGCAGGGTGC Tragopan_temminckii TTCCTCCTCCAGCAGTTGCGTTGTGGACCGGGGTCTCTGCTGCAGGGTTT Arborophila_ardens CTGGAGATGGGGTCCACCCCTGTCCTGGCTGGGGACATAGGGACCATCAC Arborophila_brunneopectus CTGGACATGGGGTGCACCCCTGTCCTGGCTGAGGACATAGGGACCACCCC Anas_platyrhynchos CTGGACATGGGATGCACCCCTGTCCTGGCTGAGGACATAGGGACCATCCC Arborophila_rufipectus CTGGACATGGGGTGCACCGCTGTCCTGGCTGAGGACATAGGGACCATCCC Chrysolophus_amherstiae CTGGACATGGGGTGCACCGCTGTCCTGGCTGAGGACATAGGGACCATCCC Gallus_gallus CTGGACATGGGGTGCACCCCTGTCCTGGCTGAGGACATAGGGACCATCCC Lophophorus_lhuysii CTGGACATGGGGTGCACCCCTGTCCTGGCTGAGGACATAGGGACCACCCC Meleagris_gallopavo CTGAACATGGGATGCACCCCTGTCCTGGCTGAGGACATAGGGACCATCCC Phasianus_colchicus CTGGAGATGGGGTGCACCCCTGTCCTGGCTGGGGACATAGGGACCATCCC Pucrasia_macrolopha CTGGAGATGGGGTCCATCCCTGTCCTGGCTGGGGACATAGGGACCATCAC Syrmaticus_reevesii CTGGAGATGGGGTCCACCCCTGTCCTGGCTGGGGACATAGGGACCATCAC Tetraophasis_szechenyii CTGGAGATGGGGTGCACCCCTGTCCTGGCTGGGGACATAGGGACCATCCC Tragopan_temminckii CTGGGGATGGGGTGCACCCCTGTCCTGCCTGGGGACATGGGGACCAGCCC Arborophila_ardens TGGGGGCAGCACCCCAGGGTTGGATGGTCCCTTCCAAGACAACCATTCAG Arborophila_brunneopectus TGGGGGAGGCACCCCAGGGTTGGATGATCCCTTACAACACAGCCATGCTG Anas_platyrhynchos TGGGGGCGGCACCCCAGGGTTGGATGATCCCTTACAATGCAGCCATTCTG Arborophila_rufipectus TGGGGGAGGCATCCCAGGGTTGGATGGTCCCTTACAACACAGCCATTCTG Chrysolophus_amherstiae TGGGGGAGGCATCCCAGGGTTGGATGGTCCCTTACAACACAGCCATTCTG Gallus_gallus TGGGGGCGGCATCCCAGAGTTGGATGGTCCCTTACAACACAGCCATTCTG Lophophorus_lhuysii TGGGGGAGGCACCCCAGGGTTGGATGATCCCTTACAACACAGCCATTCTG Meleagris_gallopavo TGGGGGCAGCACCCCAGGGTTGGATGATCCCTTACAACACAGCCATTCTG Phasianus_colchicus TGGGGGTGGCACACCGGGGTTGGATGGTCCCTTCCAAGACAACCATTCAG Pucrasia_macrolopha TGGGGGCAGCACCCCAGGGTTGGATG-TCCCTTCCAAGACAACCATTCAG Syrmaticus_reevesii TGGGGGCAGCACCCCAGGATTGGATGGTCCCTTCCAAGACAACCATTCAG Tetraophasis_szechenyii TGGGGGTGGCACACCGGGGTTGGATGGTCCCTTCCAACACAACCAATCTG Tragopan_temminckii CAGGGGGCCGTCTCAAGGGTCCTCT------------------------- Arborophila_ardens CGATTCGGCTCTGCAGTCCCCAGCAGCCTGCCACCAGTGTTGGCCCACGC Arborophila_brunneopectus TGATTCGGCTCTGCAGTCCCTAGCAGCTTGCCACCAGTGCTGGCCCACGC Anas_platyrhynchos TGATTCGGCTCTGCAGTCCCCAGCAGCCTGCCACCAGTGCTGGCCCACAC Arborophila_rufipectus TCATTCGGCTCTGCAGTCCCCAGCAGCCTGCCACCAGTGCTGGCCCATTC Chrysolophus_amherstiae TCATTCGGCTCTGCAGTCCCCAGCAGCCTGCCACCAGTGCTGGCCCATTC Gallus_gallus TGATTCGGCTCTGCAGTCCCCAGCAGCCTGCCACCAGTGCTGGCCCACGC Lophophorus_lhuysii TGATTCGGCTCTGCAGTCCCCAGCAGCCTGCCACCAGTGCTGGCTCACGC Meleagris_gallopavo TGATTCGGCTCTGCAGTCCCCAGCAGCCTGCCACCAGTGCTGGCCCACGC Phasianus_colchicus CGATTCGGCTCTGCAGTCCCCAACAACCTGCCACCAGTGTTGGCCCACGC Pucrasia_macrolopha TGATTCGGCTCTGCAGTCCCCAACAACCTGCCACCAGTGTTGGCCCACGC Syrmaticus_reevesii CGATTCGGCTCTGCAGTCCCCAACAACCTGCCACCAGTGTTGGCCCACGC Tetraophasis_szechenyii TGATTCGGCTCTGCAGTCCCCAGCAGCTTGCCACCAGAGCTGGCCCATGC Tragopan_temminckii ---CTCGCCTCTGCAGGCGGCGGGTGTGTGCCACAAGCAAATGTCTGCCT Arborophila_ardens TGTCCACATCCATGCAAATGTATGCCACCCCCTCAG Arborophila_brunneopectus TGTACACATCTATGCAAATGTATGCCACCCCCTTGG Anas_platyrhynchos TGTACACATCCATGCAAATGTATGCCACCCCCTAAG Arborophila_rufipectus TGTACACATCCATGCGAATGTATGCCACCCCCTCAG Chrysolophus_amherstiae TGTACACATCCATGCAAATGTATGCCACCCCCTAAG Gallus_gallus TGTACACATCCATGCAAATGTATGCCACCCCCTGAG Lophophorus_lhuysii TGCACACATCCATGCAAATGTATGCCACCCCCTAAG Meleagris_gallopavo TGTACACATCCATGCAAATGTATGCCACCCCCTAAG Phasianus_colchicus TGTACACTTCCATGCAAATGTATGCCACCCCCTAAG Pucrasia_macrolopha TGTACACTTCCATGCAAATGTATGCCACCCCCTAAG Syrmaticus_reevesii TGTACACTTCCATGCAAATGTATGCCACCCCCTAAG Tetraophasis_szechenyii TGTACACATCCATACAAATGTATGCCACCCCCTCAG Tragopan_temminckii CACACACACTGCCGGGGATGTATGCCACCCCCGAGT ; END; BEGIN ASSUMPTIONS; TYPESET * UNTITLED = unord: 1 - 8836; END; BEGIN CODONS; CODESET * UNTITLED = universal: 1 - 8836; END; BEGIN MESQUITECHARMODELS; ProbModelSet * UNTITLED = 'Jukes-Cantor': 1 - 8836; END; BEGIN TREES; Title 'Trees from "WITHHALFALLF.con"'; LINK Taxa = Taxa; TRANSLATE [0] 1 Arborophila_ardens, [1] 2 Arborophila_brunneopectus, [2] 3 Anas_platyrhynchos, [3] 4 Arborophila_rufipectus, [4] 5 Chrysolophus_amherstiae, [5] 6 Gallus_gallus, [6] 7 Lophophorus_lhuysii, [7] 8 Meleagris_gallopavo, [8] 9 Phasianus_colchicus, [9] 10 Pucrasia_macrolopha, [10] 11 Syrmaticus_reevesii, [11] 12 Tetraophasis_szechenyii, [12] 13 Tragopan_temminckii; TREE con_all_compat = (3:0.145527,(6:0.04382,((4:0.013269,(1:0.014049,2:0.00931)1.00:0.008802)1.00:0.05424,((13:0.042818,(7:0.020911,12:0.021737)1.00:0.006684)1.00:0.00178,(8:0.030493,(10:0.034237,(5:0.016779,(9:0.020708,11:0.014125)1.00:0.00422)1.00:0.012633)0.62:0.001857)1.00:0.00211)1.00:0.016363)0.50:0.003073):0.145527); TREE con_all_compat = (3:0.145527,(6:0.04382,((4:0.013269,(1:0.014049,2:0.00931):0.008802):0.05424,((13:0.042818,(7:0.020911,12:0.021737):0.006684):0.00178,(8:0.030493,(10:0.034237,(5:0.016779,(9:0.020708,11:0.014125):0.00422):0.012633):0.001857):0.00211):0.016363):0.003073):0.145527); END; Begin MESQUITE; MESQUITESCRIPTVERSION 2; TITLE AUTO; tell ProjectCoordinator; timeSaved 1453785611071; getEmployee #mesquite.minimal.ManageTaxa.ManageTaxa; tell It; setID 0 872242133386302042; endTell; getEmployee #mesquite.charMatrices.ManageCharacters.ManageCharacters; tell It; setID 0 6003948581120703965; mqVersion 304; checksumv 0 3 592532940 null getNumChars 8836 numChars 8836 getNumTaxa 13 numTaxa 13 short true bits 2305843009213693967 states 15 sumSquaresStatesOnly 2519818.0 sumSquares -2.305843009213631E19 longCompressibleToShort false usingShortMatrix true NumFiles 1 NumMatrices 1; mqVersion; endTell; getWindow; tell It; suppress; setResourcesState false false 100; setPopoutState 300; setExplanationSize 0; setAnnotationSize 0; setFontIncAnnot 0; setFontIncExp 0; setSize 1366 650; setLocation -8 0; setFont SanSerif; setFontSize 10; getToolPalette; tell It; endTell; desuppress; endTell; getEmployee #mesquite.minimal.ManageTaxa.ManageTaxa; tell It; showTaxa #872242133386302042 #mesquite.lists.TaxonList.TaxonList; tell It; setTaxa #872242133386302042; getWindow; tell It; newAssistant #mesquite.lists.TaxonListCurrPartition.TaxonListCurrPartition; setExplanationSize 30; setAnnotationSize 20; setFontIncAnnot 0; setFontIncExp 0; setSize 1266 578; setLocation -8 0; setFont SanSerif; setFontSize 10; getToolPalette; tell It; setTool mesquite.lists.TaxonList.TaxonListWindow.ibeam; endTell; setActive; endTell; showWindow; getEmployee #mesquite.lists.ColorTaxon.ColorTaxon; tell It; setColor Red; removeColor off; endTell; getEmployee #mesquite.lists.TaxonListAnnotPanel.TaxonListAnnotPanel; tell It; togglePanel off; endTell; endTell; endTell; getEmployee #mesquite.trees.ManageTrees.ManageTrees; tell It; showTrees 0 #mesquite.lists.TreesList.TreesList; tell It; setTreeBlock 1; getWindow; tell It; newAssistant #mesquite.lists.NumForTreeList.NumForTreeList; tell It; suppress; setValueTask #mesquite.trees.NumberOfTaxa.NumberOfTaxa; desuppress; endTell; newAssistant #mesquite.lists.TreeListRooted.TreeListRooted; newAssistant #mesquite.lists.TreeListPolys.TreeListPolys; newAssistant #mesquite.lists.TreeListPolyAssumption.TreeListPolyAssumption; setExplanationSize 30; setAnnotationSize 20; setFontIncAnnot 0; setFontIncExp 0; setSize 1266 578; setLocation -8 0; setFont SanSerif; setFontSize 10; getToolPalette; tell It; endTell; endTell; showWindow; endTell; endTell; getEmployee #mesquite.trees.BasicTreeWindowCoord.BasicTreeWindowCoord; tell It; makeTreeWindow #872242133386302042 #mesquite.trees.BasicTreeWindowMaker.BasicTreeWindowMaker; tell It; suppressEPCResponse; setTreeSource #mesquite.trees.StoredTrees.StoredTrees; tell It; setTreeBlock 1; toggleUseWeights off; endTell; setAssignedID 6657.1453552417820.3113174382609892015; getTreeWindow; tell It; setExplanationSize 30; setAnnotationSize 20; setFontIncAnnot 0; setFontIncExp 0; setSize 1266 578; setLocation -8 0; setFont SanSerif; setFontSize 10; getToolPalette; tell It; setTool mesquite.trees.BasicTreeWindowMaker.BasicTreeWindow.reroot; endTell; getTreeDrawCoordinator #mesquite.trees.BasicTreeDrawCoordinator.BasicTreeDrawCoordinator; tell It; suppress; setTreeDrawer #mesquite.trees.SquareLineTree.SquareLineTree; tell It; setNodeLocs #mesquite.trees.NodeLocsStandard.NodeLocsStandard; tell It; branchLengthsToggle off; toggleScale on; toggleBroadScale off; toggleCenter on; toggleEven on; setFixedTaxonDistance 0; endTell; setEdgeWidth 4; showEdgeLines on; orientUp; endTell; setBackground White; setBranchColor Black; showNodeNumbers off; showBranchColors on; labelBranchLengths off; centerBrLenLabels on; showBrLensUnspecified on; showBrLenLabelsOnTerminals on; setBrLenLabelColor 0 0 255; setNumBrLenDecimals 6; desuppress; getEmployee #mesquite.trees.BasicDrawTaxonNames.BasicDrawTaxonNames; tell It; setColor Black; toggleColorPartition off; toggleColorAssigned on; toggleShadePartition off; toggleShowFootnotes on; toggleNodeLabels on; toggleCenterNodeNames off; toggleShowNames on; namesAngle ?; endTell; endTell; setTreeNumber 1; setDrawingSizeMode 0; toggleLegendFloat on; scale 0; toggleTextOnTree off; togglePrintName on; showWindow; endTell; desuppressEPCResponse; getEmployee #mesquite.trees.ColorBranches.ColorBranches; tell It; setColor Red; removeColor off; endTell; getEmployee #mesquite.ornamental.BranchNotes.BranchNotes; tell It; setAlwaysOn off; endTell; getEmployee #mesquite.ornamental.ColorTreeByPartition.ColorTreeByPartition; tell It; colorByPartition off; endTell; getEmployee #mesquite.ornamental.DrawTreeAssocDoubles.DrawTreeAssocDoubles; tell It; setOn on; setDigits 4; writeAsPercentage off; toggleCentred off; toggleHorizontal on; toggleWhiteEdges on; setFontSize 10; setOffset 0 0; endTell; getEmployee #mesquite.ornamental.DrawTreeAssocStrings.DrawTreeAssocStrings; tell It; setOn on; toggleCentred on; toggleHorizontal on; setFontSize 10; setOffset 0 0; endTell; getEmployee #mesquite.trees.TreeInfoValues.TreeInfoValues; tell It; panelOpen false; endTell; endTell; endTell; getEmployee #mesquite.charMatrices.BasicDataWindowCoord.BasicDataWindowCoord; tell It; showDataWindow #6003948581120703965 #mesquite.charMatrices.BasicDataWindowMaker.BasicDataWindowMaker; tell It; getWindow; tell It; setExplanationSize 30; setAnnotationSize 20; setFontIncAnnot 0; setFontIncExp 0; setSize 1266 578; setLocation -8 0; setFont SanSerif; setFontSize 10; getToolPalette; tell It; endTell; setTool mesquite.charMatrices.BasicDataWindowMaker.BasicDataWindow.arrow; colorCells #mesquite.charMatrices.ColorByState.ColorByState; tell It; setStateLimit 9; toggleUniformMaximum on; endTell; colorRowNames #mesquite.charMatrices.TaxonGroupColor.TaxonGroupColor; colorColumnNames #mesquite.charMatrices.CharGroupColor.CharGroupColor; colorText #mesquite.charMatrices.NoColor.NoColor; setBackground White; toggleShowNames on; toggleShowTaxonNames on; toggleTight off; toggleThinRows off; toggleShowChanges off; toggleSeparateLines off; toggleShowStates on; toggleAutoWCharNames off; toggleAutoTaxonNames off; toggleShowDefaultCharNames off; toggleConstrainCW on; toggleBirdsEye off; toggleShowPaleGrid off; toggleShowPaleCellColors off; toggleShowPaleExcluded off; togglePaleInapplicable on; toggleShowBoldCellText off; toggleAllowAutosize off; toggleColorsPanel off; toggleLinkedScrolling on; toggleScrollLinkedTables off; endTell; showWindow; getWindow; tell It; forceAutosize; endTell; getEmployee #mesquite.charMatrices.ColorCells.ColorCells; tell It; setColor Red; removeColor off; endTell; getEmployee #mesquite.categ.StateNamesStrip.StateNamesStrip; tell It; showStrip off; endTell; getEmployee #mesquite.charMatrices.AnnotPanel.AnnotPanel; tell It; togglePanel off; endTell; getEmployee #mesquite.charMatrices.CharReferenceStrip.CharReferenceStrip; tell It; showStrip off; endTell; getEmployee #mesquite.charMatrices.QuickKeySelector.QuickKeySelector; tell It; autotabOff; endTell; getEmployee #mesquite.charMatrices.SelSummaryStrip.SelSummaryStrip; tell It; showStrip off; endTell; getEmployee #mesquite.align.AlignToDropped.AlignToDropped; tell It; gapCosts 8 3 2 2; subCosts 10 5 10 10 10 5 5 10 10 10 5 10; endTell; getEmployee #mesquite.molec.ColorByAA.ColorByAA; tell It; emphasizeDegeneracy off; endTell; getEmployee #mesquite.molec.SequenceInfoEditor.SequenceInfoEditor; tell It; panelOpen false; endTell; endTell; endTell; getEmployee #mesquite.charMatrices.ManageCharacters.ManageCharacters; tell It; showCharacters #6003948581120703965 #mesquite.lists.CharacterList.CharacterList; tell It; setData 0; getWindow; tell It; newAssistant #mesquite.lists.CharListInclusion.CharListInclusion; newAssistant #mesquite.lists.CharListPartition.CharListPartition; newAssistant #mesquite.lists.CharListCodonPos.CharListCodonPos; setExplanationSize 30; setAnnotationSize 20; setFontIncAnnot 0; setFontIncExp 0; setSize 1266 578; setLocation -8 0; setFont SanSerif; setFontSize 10; getToolPalette; tell It; endTell; endTell; showWindow; getEmployee #mesquite.lists.CharListAnnotPanel.CharListAnnotPanel; tell It; togglePanel off; endTell; endTell; endTell; endTell; end;