NEXUS
[File created by TreeBASE:  1/16/09  15:30:14]
[Matrix accession#: M3422]

BEGIN TAXA;
	TITLE M3422;
	DIMENSIONS  NTAX=25;
	TAXLABELS
		Neurolepis_aperta	Glaziophyton_mirabile	Aulonemia_patula	Atractantha_radiata	Arthrostylidium_ecuadorense	Chusquea_bilimekii	Guadua_angustifolia	Aulonemia_laxa	Aulonemia_clarkiae	Aulonemia_fulgor	Rhipidocladum_racemiflorum	Guadua_aculeata	Guadua_velutina	Guadua_longifolia	Guadua_amplexifolia	Guadua_paniculata	Eremocaulon_aureofimbriatum	Eremocaulon_asymmetricum	Olmeca_reflexa	Olmeca_recta	Otatea_sp_nov	Otatea_glauca	Otatea_fimbriata	Otatea_acuminata	Bambusa_vulgaris
	;
END;

BEGIN CHARACTERS;
	TITLE M3422;
	DIMENSIONS NCHAR=30;
	FORMAT DATATYPE = DNA MISSING = ? GAP = - ;
	MATRIX
		Neurolepis_aperta                 ?????ctccggttgtaataaggggccacaa
		Glaziophyton_mirabile             ?????caccgattgcaacaagtggtcaaaa
		Aulonemia_patula                  ?????cacaaatggcagtaagtggttcaac
		Atractantha_radiata               ?????caccaattgcaa-aagtggtcaaaa
		Arthrostylidium_ecuadorense       ?????caccgatggcaatgcgggttcaaaa
		Chusquea_bilimekii                cacctctttaggtgcgacaaaggtccacac
		Guadua_angustifolia               -gtactaccgagtgtaa-gagtggtcaaaa
		Aulonemia_laxa                    cacct???????????ataagttgttaaac
		Aulonemia_clarkiae                agtat???????????atacgtggtcaaaa
		Aulonemia_fulgor                  agtatcaccgagtgtaataagttgtcaaaa
		Rhipidocladum_racemiflorum        cacctcaccgattgcagt-agtggtcaaaa
		Guadua_aculeata                   agtactaccgagtgtaatgagtggtcaaaa
		Guadua_velutina                   agtactaccgagtgtaatgagtggtcaaaa
		Guadua_longifolia                 -gtactaccgagtgtaatgagtggtcaaaa
		Guadua_amplexifolia               -gtacttccgagtgtaatgagtggtcaaaa
		Guadua_paniculata                 -gtactaccgagtgtaatgagtggtcaaaa
		Eremocaulon_aureofimbriatum       -gtactaccgagtttaataagtggtcaaaa
		Eremocaulon_asymmetricum          -gtactctcgagtttaataagtggtcaaaa
		Olmeca_reflexa                    agtaccaccgagtgtaataagtggtcaaaa
		Olmeca_recta                      -gtatcaccgagtgtaatacgtggtcaaaa
		Otatea_sp_nov                     -gtatcaccgagtgtaat-agtggtcaaca
		Otatea_glauca                     -gtatcaccgagtgtaat-agtggtcaaca
		Otatea_fimbriata                  -gtatcaccgagtgtaat-agtggtcaaca
		Otatea_acuminata                  agtatcaccgagtgtaat-agtggtcaaca
		Bambusa_vulgaris                  cacctctctggatgcgataaagggcccaaa
	;
END;

BEGIN CODONS;
CODONPOSSET * CodonPositions = 
 N: 1 - 30 ; 
 CODESET * UNTITLED = Universal: all ; 
 END;

BEGIN ASSUMPTIONS;
OPTIONS DEFTYPE = unord PolyTcount = MINSTEPS ; 
 TYPESET * UNTITLED = unord: 1 - 26 , ord: 27 - 30 ; 
 END;