NEXUS [File created by TreeBASE: 1/16/09 15:30:20] [Matrix accession#: M3429] BEGIN TAXA; TITLE M3429; DIMENSIONS NTAX=36; TAXLABELS Neofusicoccum_ribis Mycosphaerella_toledana Mycosphaerella_nubilosa Mycosphaerella_molleriana_CMW4940 Mycosphaerella_molleriana_CMW11588 Mycosphaerella_molleriana_CBS110499 Mycosphaerella_cryptica Kirramyces_zuluensis_CMW7449 Kirramyces_zuluensis_CMW13328 Kirramyces_viscida_MUCC469 Kirramyces_viscida_MUCC468 Kirramyces_viscida_MUCC467 Kirramyces_viscida_MUCC456 Kirramyces_viscida_MUCC455 Kirramyces_viscida_MUCC454 Kirramyces_viscida_MUCC453 Kirramyces_viscida_MUCC452 Kirramyces_eucalypti_CMW17917 Kirramyces_eucalypti_CMW17916 Kirramyces_eucalypti_CMW17915 Kirramyces_eucalypti_CMW11687 Kirramyces_epicoccoides_SA12 Kirramyces_epicoccoides_MUCC425 Kirramyces_epicoccoides_MUCC327 Kirramyces_epicoccoides_CMW22484 'Kirramyces destructans CMW22553-INDO' 'Kirramyces destructans CMW19909-CHN' 'Kirramyces destructans CMW19832-INDO' 'Kirramyces destructans CMW17919-CHN' 'Kirramyces destructans CMW17918-INDO' 'Kirramyces destructans CMW16123-THAI' 'Kirramyces destructans CMW16120-THAI' 'Kirramyces destructans CMW15092-VTN' 'Kirramyces destructans CMW15090-VTN' 'Kirramyces destructans CMW15089-VTN' 'Kirramyces destructans CMW13337-THAI' ; END; BEGIN CHARACTERS; TITLE M3429; DIMENSIONS NCHAR=337; FORMAT DATATYPE = DNA MISSING = N GAP = - ; MATRIX Neofusicoccum_ribis NNNNNNNGAAGTT-CGAGAAGGTAAGAAAGTTTTTCCT-TCCGCTGCACGCGCTGGGTGC-TGGG---TGCTGGGTGCTGGG-------TGCTG-GGTTCCCGCACTCAATTTGCCTTATCGCTTCGGTGAGG-GGCATTTTGGTGGTGGGGTTGGCC--CGCGCTAAGC-CTCGTTCGGGCTCGGCAAAATGT-CC-GCAT---CTGGTTTTTTTGCGACCGGCGT-GCGACCGAAGCGCACCCCTC--GCCAGA-CACGCCACGC----ATGTGCGACCAGACGCTAACGGCCATCCCAGGAAGCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNN Mycosphaerella_toledana TCATCGAGAAGTTTCGAGAAGGTCAGTACACACCACAAATACA---TATTTGCTGCATGCACAGCAAAA-TTTCTC-CT-------------TGCGATTGGAGGGG-CTATTTGGTG------TTTGGTGGGA-TGCGAC---AAGCGACGCTTGGCC-CTGCAGTC-GAGCGTCACCC-GCCCC--AACGT-CGCCAAAGAGTTTTTCTCTGCCATCA------GTCGCTGC-A--GCGTCTTTTCTTTGCGAAG-TCGCATTTAC--TC-AGCGGGAAGTGTCGCTGACATTTCTCACAGGAAGCCGCCGAGTTGGGTAAGGgTTCCTTCAAGTA Mycosphaerella_nubilosa TCATCGAGAAGTT-CGAGAAGGTTAGTACACACCACAA-GACA-----TTTGCTGCCTACAAGGCAAA--TTTCTT-CT-CAAA-----TTGCGTGGTTGGAGGGG-CAATTTGGTG------TGTGGTGGGGGTGCGACC--GAC-GGCGCTTGGCCTTTGCAGTC-AAGCGCCATCC-GCTTC-CAAC---------AT-------CTGCCACAC--------CTCGTTGC-AA--CATTTTC-----GTTAAA-TAGCCAAG-CTTCCAGTAAGAACCC-TTGCTGACATAACTCACAGGAAGCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNN Mycosphaerella_molleriana_CMW4940 TCATCGAGAAGTT-CGAGAAGGTCAGTACACACCACAA-TACA---TATCTGCTGCTT--ATGGCAAA-TTTTCTTCTC-GCAG-----TCGGGCGATTGGAGGGG-CAATTTGGTG------TTTGGTGGGG-TGCGACC--GGC-GACGCTTGGCC-CTGCAGTC-GAGCGTCACCC-GCCTC-CAAAAT-CG------------------TCACA-------------GC-A--GCATCTTC-----GCAGAA-TCGCAATTACTA-CTAGCGGGAACGGTCGCTGACATGCCTCACAGGAAGCCGCCGAGTTGGGTAAGGGTTCCTTCAAGTA Mycosphaerella_molleriana_CMW11588 TCATCGAGAAGTT-CGAGAAGGTCAGTACACACCACAA-TACA---TATCTGCTGCTT--ATGGCAAA-TTTTCTTGTC-GCAG-----TCGGGCGATTGGAGGGG-CAATTTGGTG------TTTGGTGGGG-TGCGACC--GGC-GACGCTTGGCC-CTGCAGTC-GAGCGTCACCC-GCCTC-CAAAAT-CG------------------TCACA-------------GC-A--GCATCTTC-----GCAGAA-TCGCAATTACTATCTAGCGGGAACGGTCGCTGACATAACTCACAGGAAGCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNN Mycosphaerella_molleriana_CBS110499 TCATCGAGAAGTT-CGAGAAGGTCAGTACACACCACAA-TACA---TATCTGCTGCTT--ATGGCAAA-TTTTCTTGTC-GCAG-----TCGGGCGATTGGAGGGG-CAATTTGGTG------TTTGGTGGGG-TGCGACC--GGC-GACGCTTGGCC-CTGCAGTC-GAGCGTCACCC-GCCTC-CAAAAT-CG------------------TCACA-------------GC-A--GCATCTTC-----GCAGAA-TCGCAATTACTA-CTAGCGGGAACGGTCGCTGACATGCCTCACAGGAAGCCGCCGAGTTGGGTAAGGGTTCCTTCAAGTA Mycosphaerella_cryptica TCATCGAGAAGTT-CGAGAAGGTTCGTACAGACTCATA-CACG---CGTTCGTTGCTGGCACGGCAAATTTCTCTTGCT-GC--------TGGGCGATCGGAGGGG-CAATTTGGTG------TTTGGTGGGG-CGCGACC--GAGCG-CGCTTGGCCGTTGCAGTC-AAGCGTCATTC-GCCTT-CACCAC-CGCCAAAATGC-ATCCTCTTCCGCCCG-------CGAT---AGTG-AC-TTATCT--GCCAAG-CCACAGCAGCCGCGAG-TGAAAACCGCCGCTGACATGACTCACAGGAAGCCGCCGAGTTGGGTAAGGGTTCCTTCAAGTA Kirramyces_zuluensis_CMW7449 TCATCGAGAAGTT-CGAGAAGGTCAGTACACCACAACA-TACA-----CTTGCTGCCTGCGCGGCAAATTTTTCTTCTT-GCCGCTGCGTCGGGCGGTTGGAGGGG-CAATTTGGCG------TTTGGTGGGG-TGCGACC--GAT-AGCGCTTGGCC-ATGCA--C-GAGCGCTATCT-GCCTC-CAACATTCGCCAGATCGCGCT-CACTACCACCG------TTCGCTGC-AATACACC--------GCCAGG-CAGCATCCGCCATCCT-TGAGAGCCGCCGCTGACATGACTGACAGGAAGCCGCCGAGTTGGGTAAGGGTTCCTTCAAGTA Kirramyces_zuluensis_CMW13328 TCATCGAGAAGTT-CGAGAAGGTCAGTACACCACAACA-TACA-----CTTGCTGCCTGCGCGGCAGACTTTTCTTCTT-GCCGCTGCGTCGGGCGGTTGGAGGGG-CAATTTGGCG------TTTGGTGGGG-TGCGACC--GAT-AGCGCTTGGCC-TTGCA--C-GAGCGCTATCT-GCCTC-CAACATTCGCCAGATCGCGCT-CAATACCACCG------TTCGCTGC-AATACATC--------GCCAGG-CAGCATCCGCTATTAT-TGAGAGCCGCCGCTGACATGACTCACAGGAAGCCGCCGAGTTGGGTAAGGGTTCCTTCAAGTA Kirramyces_viscida_MUCC469 TCATCGAGAAGTT-CGAGAAGGTCAGTACATACCACAA---------------TGCCTGCGCGGCAAA--TTTCTT-TT-CCA------TCGTGCGGTTGGAGGGG-CATTTTGGGT------TTTGGTGGGG-TGCGACC--GAC-GGCGCTTGGCCTTTGCAATT-CAGCGTCACCCGGC----CAAAATGCGCC-----------CTTTACGACAG------CTAGTCAC-AA--CTCcTTC---------------------------GACAGAGccc-tcgctGACAAGTGTCACAGGAAGCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNN Kirramyces_viscida_MUCC468 TCATCGAGAAGTT-CGAGAAGGTCAGTACATACCACAA---------------TGCCTGCGCGGCAAA--TTTCTT-TT-CCA------TCGTGCGGTTGGAGGGG-CATTTTGGGT------TTTGGTGGGG-TGCGACC--GAC-GGCGCTTGGCCTTTGCAATT-CAGCGTCACCCGGC----CAAAATGCGCC-----------CTTTACGACAG------CTAGTCAC-AA--CTCcTTC---------------------------GACAGAGccc-tcgctGACAAGTGTCACAGGAAGCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNN Kirramyces_viscida_MUCC467 TCATCGAGAAGTT-CGAGAAGGTCAGTACATACCACAA---------------TGCCTGCGCGGCAAA--TTTCTT-TT-CCA------TCGTGCGGTTGGAGGGG-CATTTTGGGT------TTTGGTGGGG-TGCGACC--GAC-GGCGCTTGGCCTTTGCAATT-CAGCGTCACCCGGC----CAAAATGCGCC-----------CTTTACGACAG------CTAGTCAC-AA--CTCcTTC---------------------------GACAGAGccc-tcgctGACAAGTGTCACAGGAAGCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNN Kirramyces_viscida_MUCC456 TCATCGAGAAGTT-CGAGAAGGTCAGTACATACCACAA---------------TGCCTGCGCGGCAAA--TTTCTT-TT-CCA------TCGTGCGGTTGGAGGGG-CATTTTGGGT------TTTGGTGGGG-TGCGACC--GAC-GGCGCTTGGCCTTTGCAATT-CAGCGTCACCCGGC----CAAAATGCGCC-----------CTTTACGACAG------CTAGTCAC-AA--CTCCTTC---------------------------GACAGAGCCC-TCGCTGACAAGTGTCACAGGAAGCCGCCGAGTTGGGTAAGGGTTCCTTCAAGTA Kirramyces_viscida_MUCC455 TCATCGAGAAGTT-CGAGAAGGTCAGTACATACCACAA---------------TGCCTGCGCGGCAAA--TTTCTT-TT-CCA------TCGTGCGGTTGGAGGGG-CATTTTGGGT------TTTGGTGGGG-TGCGACC--GAC-GGCGCTTGGCCTTTGCAATT-CAGCGTCACCCGGC----CAAAATGCGCC-----------CTTTACGACAG------CTAGTCAC-AA--CTCCTTC---------------------------GACAGAGCCC-TCGCTGACAAGTGTCACAGGAAGCCGCCGAGTTGGGTAAGGGTTCCTTCAAGTA Kirramyces_viscida_MUCC454 TCATCGAGAAGTT-CGAGAAGGTCAGTACATACCACAA---------------TGCCTGCGCGGCAAA--TTTCTT-TT-CCA------TCGTGCGGTTGGAGGGG-CATTTTGGGT------TTTGGTGGGG-TGCGACC--GAC-GGCGCTTGGCCTTTGCAATT-CAGCGTCACCCGGC----CAAAATGCGCC-----------CTTTACGACAG------CTAGTCAC-AA--CTCCTTC---------------------------GACAGAGCCC-TCGCTGACAAGTGTCACAGGAAGCCGCCGAGTTGGGTAAGGGTTCCTTCAAGTA Kirramyces_viscida_MUCC453 TCATCGAGAAGTT-CGAGAAGGTCAGTACATACCACAA---------------TGCCTGCGCGGCAAA--TTTCTT-TT-CCA------TCGTGCGGTTGGAGGGG-CATTTTGGGT------TTTGGTGGGG-TGCGACC--GAC-GGCGCTTGGCCTTTGCAATT-CAGCGTCACCCGGC----CAAAATGCGCC-----------CTTTACGACAG------CTAGTCAC-AA--CTCCTTC---------------------------GACAGAGCCC-TCGCTGACAAGTGTCACAGGAAGCCGCCGAGTTGGGTAAGGGTTCCTTCAAGTA Kirramyces_viscida_MUCC452 TCATCGAGAAGTT-CGAGAAGGTCAGTACATACCACAA---------------TGCCTGCGCGGCAAA--TTTCTT-TT-CCA------TCGTGCGGTTGGAGGGG-CATTTTGGGT------TTTGGTGGGG-TGCGACC--GAC-GGCGCTTGGCCTTTGCAATT-CAGCGTCACCCGGC----CAAAATGCGCC-----------CTTTACGACAG------CTAGTCAC-AA--CTCCTTC---------------------------GACAGAGCCC-TCGCTGACAAGTGTCACAGGAAGCCGCCGAGTTGGGTAAGGGTTCCTTCAAGTA Kirramyces_eucalypti_CMW17917 TCATCGAGAAGTT-CGAGAAGGTCAGTACATATCACAA---------------TGCCTGCGCGGCAAA--TTTCTT-TT-CCA------TCGTGCGGTTGGAGGGG-CAATTTGGGT------TTTGGTGGGG-TGCGACC--GAC-GGCGCTTGGCCTTTGCAATT-CAGCGTCACCCGGT----CAAAATGCGTC-----------CTCTACGACAA------GTCGTCAC-AA--CTCCTTC-----GTCAAA-TAGCCAAGACTTTCAGATAGAGCCC-TCGcTGACAAGTGTCACAGGAAGCCGCCGAGTTGGGTAAGGGTTCCTTCAAGTA Kirramyces_eucalypti_CMW17916 TCATCGAGAAGTT-CGAGAAGGTCAGTACATATCACAA---------------TGCCTGCGCGGCAAA--TTTCTT-TT-CCA------TCGTGCGGTTGGAGGGG-CAATTTGGGT------TTTGGTGGGG-TGCGACC--GAC-GGCGCTTGGCCTTTGCAATT-CAGCGTCACCCGGT----CAAAATGCGCC-----------CTCTACGACAA------GTCGTCAC-AA--CTCCTTC-----GTCAAA-TAGCCAAGACTT-CAGATAGAGCCC-TCGCTGACAAGTGTCACAGGAAGCCGCCGAGTTGGGTAAGGGTTCCTTCAAGTA Kirramyces_eucalypti_CMW17915 TCATCGAGAAGTT-CGAGAAGGTCAGTACATACCAGAA---------------TGCCTGCGCGGCAAA--CTTCTT-TT-CCA------TCGTGCGGTTGGAGGGG-CAATTTGGGT------TTTGGTGGGG-TGCGACC--GAC-GGCGCTTGGCCTATGCAATT-CAGCGTCACCCGGC----CAAAATGCGCC-----------CTCTACGACAA------CTCGTCAC-AA--CTCCTTC-----GTCAAA-TAGCCAAGACTTTCAGATAGAGCCC-TCGCTGACAAGTGTCACAGGAAGCCGCCGAGTTGGGTAAGGGTTCCTTCAAGTA Kirramyces_eucalypti_CMW11687 TCATCGAGAAGTT-CGAGAAGGTCAGTACATACCAGAA---------------TGCCTGCGCGGCAAA--CTTCTT-TT-CCA------TCGTGCGGTTGGAGGGG-CAATTTGGGT------TTTGGTGGGG-TGCGACC--GAC-GGCGCTTGGCCTTTGCAATT-CAGCGTCACCCGGC----CAAAATGCGCC-----------CTCTACGACAA------CTCGTCAC-AA--CTCCTTC-----GTCAAA-TAGCCAAGACTTTCAGATAGAGCCC-TCGCTGACAAGTGTCACAGGAAGCCGCCGAGTTGGGTAAGGGTTCCTTCAAGTA Kirramyces_epicoccoides_SA12 TCATCGAGAAGTT-CGAGAAGGTCAGTACAAATTACCT-TACA---CACCCGCTGGTTACATGGCAAATTTTTCTTGCTTGTAAAAAG--CGGGCGGTTGGAGGGG-CAATTTGGGT------GTTGGTGGGG-TGCGACC--GTG-TGCGCTTGGCC--CGCACTC-GC-CTCCAGC--GCTCC-CAAAATGC---AGAGC------CT--GCCACTA------GTCGCGAC-AATG-TCCTT------GCAAGATTA---GAGATTA--TGG-AGGATC-GCCGCTGACG-GACTCACAG-AAGCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNN Kirramyces_epicoccoides_MUCC425 TCATCGAGAAGTT-CGAGAAGGTCAGTACAAATTACCT-TACA---CACCCGCTGGTTACATGGCAAATTTTTCTTGCTTGTAAAAAG--CGGGCGGTTGGAGGGG-CAATTTGGGT------GTTGGTGGGG-TGCGACC--GTG-TGCGCTTGGCC--CGCACTC-GC-CTCCAGC--GCTCC-CAAATTGC---AGAGC------CC--CCCACTA------GTCGCGAC-AATG-TCCTT------GCAAGATTA---GAGATTA--TGG-AGGATC-GCCGC-GACG-GACTCACAG-AAGCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNN Kirramyces_epicoccoides_MUCC327 TCATCGAGAAGTT-CGAGAAGGTCAGTACAAATTACCT-TACA---CACCCGCTGGTTACATGGCAAATTTTTCTTGCTTGTAAAAAG--CGGGCGGTTGGAGGGG-CAATTTGGGT------GTTGGTGGGG-TGCGACC--GTG-TGCGCTTGGCC--CGCACTC-GC-CTCCAGC--GCTCC-CAAAATGC---AGAGC------CT--GCGACTA------GTCGCGAC-AATG-TCCTT------GCAAGATTA---GAGATTA--TGG-AGGATC-GCCGCTGACG-GACTCACAG-AAGCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNN Kirramyces_epicoccoides_CMW22484 TCATCGAGAAGT--CGAGAAGGTCAGTACAAATTACCT-TACA---CACCCGCTGGTTACACGGCAAATTTTTCTTGCTTGTAAAAAG--CGGGCGGTTGGAGGGG-CAATTTGGGT------GTTGGTGGGG-TGCGACC--GTG-TGCGCTTGGCC--CGCACTC-GC-CTCCAGC--GCTCC-CAAATTGC---AGAGC------CT--GCCACTA------GTCGCGAC-AATG-TCCTT------GCAAGATTA---GAGATTA--TGG-AGGATC-GCCGCTGACG-TACTCACAG-AAGCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNN 'Kirramyces destructans CMW22553-INDO' TCATCGAGAAGTT-CGAGAAGGTCAGTACATACCACAA---------------TGCCTGCGCGGCAAA--TTTCTT-TT-CCA------TCGTGCGGTTGGAGGGG-CATTTTGGGT------TTTGGTGGGG-TGCGACC--GAC-GGCGCTTGGCCTTTGCAATT-CAGCGTCACCCGGC----CAAAATGCGCC-----------CTCTACGACAA------CTCGTCAC-AA--CTCCTTC---------------------------GACAGAGCCC-TCGCTGACAAGTGTCACAGGAAGCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNN 'Kirramyces destructans CMW19909-CHN' TCATCGAGAAGTT-CGAGAAGGTCAGTACATACCACAA---------------TGCCTGCGCGGCAAA--TTTCTT-TT-CCA------TCGTGCGGTTGGAGGGG-CATTTTGGGT------TTTGGTGGGG-TGCGACC--GAC-GGCGCTTGGCCTTTGCAATT-CAGCGTCACCCGGC----CAAAATGCGCC-----------CTCTACGACAA------CTCGTCAC-AA--CTCCTTC---------------------------GACAGAGCCC-TCGCTGACAAGTGTCACAGGAAGCCGCCGAGTTGGGTAAGGGTTCCTTCAAGTA 'Kirramyces destructans CMW19832-INDO' TCATCGAGAAGTT-CGAGAAGGTCAGTACATACCACAA---------------TGCCTGCGCGGCAAA--TTTCTT-TT-CCA------TCGTGCGGTTGGAGGGG-CATTTTGGGT------TTTGGTGGGG-TGCGACC--GAC-GGCGCTTGGCCTTTGCAATT-CAGCGTCACCCGGC----CAAAATGCGCC-----------CTCTACGACAA------CTCGTCAC-AA--CTCCTTC---------------------------GACAGAGCCC-TCGCTGACAAGTGTCACAGGAAGCCGCCGAGTTGGGTAAGGGTTCCTTCAAGTA 'Kirramyces destructans CMW17919-CHN' TCATCGAGAAGTT-CGAGAAGGTCAGTACATACCACAA---------------TGCCTGCGCGGCAAA--TTTCTT-TT-CCA------TCGTGCGGTTGGAGGGG-CATTTTGGGT------TTTGGTGGGG-TGCGACC--GAC-GGCGCTTGGCCTTTGCAATT-CAGCGTCACCCGGC----CAAAATGCGCC-----------CTCTACGACAA------CTCGTCAC-AA--CTCCTTC---------------------------GACAGAGCCC-TCGCTGACAAGTGTCACAGGAAGCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNN 'Kirramyces destructans CMW17918-INDO' TCATCGAGAAGTT-CGAGAAGGTCAGTACATACCACAA---------------TGCCTGCGCGGCAAA--TTTCTT-TT-CCA------TCGTGCGGTTGGAGGGG-CATTTTGGGT------TTTGGTGGGG-TGCGACC--GAC-GGCGCTTGGCCTTTGCAATT-CAGCGTCACCCGGC----CAAAATGCGCC-----------CTCTACGACAA------CTCGTCAC-AA--CTCCTTC---------------------------GACAGAGCCC-TCGCTGACAAGTGTCACAGGAAGCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNN 'Kirramyces destructans CMW16123-THAI' NCATCGAGAAGTT-CGAGAAGGTCAGTACATACCACAA---------------TGCCTGCGCGGCAAA--TTTCTT-TT-CCA------TCGTGCGGTTGGAGGGG-CATTTTGGGT------TTTGGTGGGG-TGCGACC--GAC-GGCGCTTGGCCTTTGCAATT-CAGCGTCACCCGGC----CAAAATGCGCC-----------CTCTACGACAA------CTCGTCAC-AA--CTCCTTC---------------------------GACAGAGCCC-TCGCTGACAAGTGTCACAGGAAGCCGCCGAGTTGGGTAAGGGTTCCTTCAAGTA 'Kirramyces destructans CMW16120-THAI' TCATCGAGAAGTT-CGAGAAGGTCAGTACATACCACAA---------------TGCCTGCGCGGCAAA--TTTCTT-TT-CCA------TCGTGCGGTTGGAGGGG-CATTTTGGGT------TTTGGTGGGG-TGCGACC--GAC-GGCGCTTGGCCTTTGCAATT-CAGCGTCACCCGGC----CAAAATGCGCC-----------CTCTACGACAA------CTCGTCAC-AA--CTCCTTC---------------------------GACAGAGCCC-TCGCTGACAAGTGTCACAGGAAGCCGCCGAGTTGGGTAAGGGTTCCTTCAAGTA 'Kirramyces destructans CMW15092-VTN' TCATCGAGAAGTT-CGAGAAGGTCAGTACATACCACAA---------------TGCCTGCGCGGCAAA--TTTCTT-TT-CCA------TCGTGCGGTTGGAGGGG-CATTTTGGGT------TTTGGTGGGG-TGCGACC--GAC-GGCGCTTGGCCTTTGCAATT-CAGCGTCACCCGGC----CAAAATGCGCC-----------CTCTACGACAA------CTCGTCaC-AA--cTCCTTC---------------------------GACAGAGCCC-TCGCTGACAAGTGTCACAGGAAGCCGCCGAGTTGGGTAAGGGTTCCTTCAAGTA 'Kirramyces destructans CMW15090-VTN' TCATCGAGAAGTT-CGAGAAGGTCAGTACATACCACAA---------------TGCCTGCGCGGCAAA--TTTCTT-TT-CCA------TCGTGCGGTTGGAGGGG-CATTTTGGGT------TTTGGTGGGG-TGCGACC--GAC-GGCGCTTGGCCTTTGCAATT-CAGCGTCACCCGGC----CAAAATGCGCC-----------CTCTACGACAA------CTCGTCAC-AA--CTCCTTC---------------------------GACAGAGCCC-TCGCTGACAAGTGTCACAGGAAGCCGCCGAGTTGGGTAAGGGTTCCTTCAAGTA 'Kirramyces destructans CMW15089-VTN' NNNNNGAGAAGTT-CGAGAAGGTCAGTACATACCACAA---------------TGCCTGCGCGGCAAA--TTTCTT-TT-CCA------TCGTGCGGTTGGAGGGG-CATTTTGGGT------TTTGGTGGGG-TGCGACC--GAC-GGCGCTTGGCCTTTGCAATT-CAGCGTCACCCGGC----CAAAATGCGCC-----------CTCTACGACAA------CTCGTCAC-AA--CTCCTTC---------------------------GACAGAGCCC-TCGCTGACAAGTGTCACAGGAAGCCGCCGAGTTGGGTAAGGGTTCCTTCAAGTA 'Kirramyces destructans CMW13337-THAI' TCATCGAGAAGTT-CGAGAAGGTCAGTACATACCACAA---------------TGCCTGcGCGGCAaA--TTTCTT-Tt-cca------TCGTGCGGTTGGAGGGG-CATTTTGGGT------TTTGGTGGGG-TGCGACC--GAC-GGCGCTTGGCCTTTGCAATT-CAGCGTCACCCGGC----CAAAATGCGCC-----------CTCTACGACAA------CTCGTCAC-AA--CTCCTTC---------------------------GACAGAGCCC-TCGCTGACAAGTGTCACAGGAAGCCGCCGAGTTGGGTAAGGGTTCCTTCAAGTA ; END; BEGIN CODONS; CODONPOSSET * CodonPositions = N: 1 - 337 ; CODESET * UNTITLED = Universal: all ; END; BEGIN ASSUMPTIONS; OPTIONS DEFTYPE = unord PolyTcount = MINSTEPS GAPMODE = NEWSTATE ; END;