#NEXUS
[written Thu Oct 29 23:04:33 SGT 2020 by Mesquite  version 3.61 (build 927) at NoPsechrids.local/10.0.1.2]

BEGIN TAXA;
	TITLE Taxa;
	DIMENSIONS NTAX=11;
	TAXLABELS
		Mortierella_ambigua_JX976067 Mortierella_ambigua_JX976062 Mortierella_capitata_JX976008 Mortierella_wolfii_HQ630305 Mortierella_wolfii_HQ630304 Mortierella_microzygospora_HQ630317 Mortierella_pseudozygospora_JX975880 Mortierella_sp._OTU_1256 Mortierella_parazychae_HQ630283 Mortierella_rostafinskii_HQ630358 Mortierella_strangulata_HQ630359 
	;

END;


BEGIN CHARACTERS;
	TITLE  'Mortierella-5';
	DIMENSIONS  NCHAR=440;
	FORMAT DATATYPE = DNA GAP = - MISSING = ?;
	MATRIX
	Mortierella_ambigua_JX976067          CGAAATGCGATACGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCATATTGCGCTCTTTGGTATTCCGAAGAGCATGCTTGTTTGAGTATCAGTAAACACCTCAACCAGATTTTTT---------TTCTGGATGGACTTGAGCA----AACCCAACATTGGTCTC--TTTCGAGAGG-----TCGGCGGCGGGTTGCTTGAAATGCAGGTGCAGCTGTGACAAGAACAGACTGAGCTAA------AAGCATATCTAATTTAGTCC-GCCTGGCGGATTATCTCT-ATTTGCTGCAG-----TTCA-ACTAAAA--GTCGTCTTG-GCGAGCTG-ACTGATGCAGGATTTGTCAGACTTTCCTCTCT----AAGAGAGGACTTTTCTTTCAAAACTCGATCTCAAATCAAGTAAGACTACCCGCTGA
	Mortierella_ambigua_JX976062          CGAAATGCGATACGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCATATTGCGCTCTTTGGTATTCCGAAGAGCATGCTTGTTTGAGTATCAGTAAACACCTCAACCAGATTTTT----------TTCTGGATGGACTTGAGCA----AACCCAACATTGGTCTC--TTTCGAGAGG-----TCGGCGGCGGGTTGCTTAAAATGCAGGTGCAGCTGTGACAAGAACAGACTGAGCTAA------AAGCATATCTAATTTAGTCC-GCCTGGCGGATTATCTCT-ATTTGCTGCAG-----TTCACACTAAAA--GTCGTCTTG-GCGAGCTG-ACTGATGCAGGATTTGTCAGACTTTCCTCTCTCTTTGGAGAAAGGGCTTTCTTTCAAAACTCGATCTCAAATCAAGTAAGACTACCCGCTGA
	Mortierella_capitata_JX976008         CGAAATGCGATACGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCATATTGCGCTCTTTGGTATTCCGAAGAGCATGCTTGTTTGAGTATCAGTAAACACCTCAACCAGATTTCT----------TTCTGGATGGATTTGAGCA----AACCCAACA-----CTC--TTTCACGAGG--------GCGGCGGGTTGCTTGAAATGCAGGTGCAGCTGTAACAAGAACAGACTGAGCTAA------AAGCATATCTAATTTAGTCCGTCTCGGCGGATTATTACC-ATTTGCTGCAG-----CTA--CTCTAAG--GTCCTCTTG-TCGAGCTG-ACTGATGCAGGATTTGTCAGATTGCACACTCTC------GGGTGTGAGTTCTTTCAAAACTCGATCTCAAATCAAGTAAGACTACCCGCTGA
	Mortierella_wolfii_HQ630305           CGAAATGCGATACGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCATATTGCGCTCTTTGGTATTCCGAAGAGCATGCTTGTTTGAGTATCAGTAAACACCTCAGCCAAAATTCTATTTTTTGAATTTTGGATGGATTTGAGCA----AACCCAACGGCAAATGC--GCTTAGCAAA-------TGCGGCGGGTTGCTTGAAATGCAGGTGCAGCTGTGACAAGAACAGACTGAGCTAA------AAGCATATCTA-TTTAGTCCGTTTCGGCGGATTATTTCCAATTTGCTGCAG-----CTA--CTCTAAG--GTCCTCTTGTGTGAGCTG-ACTGATGCAGGATTTTGTTGGAAGGCCTT--------------GGTCTTCTTTCAAAAACTCGATCTCAAATCAAGTAAGACTACCCGCTGA
	Mortierella_wolfii_HQ630304           CGAAATGCGATACGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCATATTGCGCTCTTTGGTATTCCGAAGAGCATGCTTGTTTGAGTATCAGTAAACACCTCAACCAAAATTCTATTTTTTGAATTTTGGATGGATTTGAGCA----AACCCAACGGCAAATGC--GCCTAGCAAA-------TGCGGCGGGTTGCTTGAAATGCAGGTGCAGCTGTGACAAGAACAGACTGAGCTAA------AAGCATATCTA-TTTAGTCCGTTTCGGCGGATTATTTCTAATTTGCTGCAG-----CTA--CTCTAAG--GTCCTCTTGTGTGAGCTG-ACTGATGCAGGATTTTGTTAGAAGGCCTT--------------GGTCTTC-TTCAAAAACTCGATCTCAAATCAAGTAAGACTACCCGCTGA
	Mortierella_microzygospora_HQ630317   CGAAATGCGATACGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCATATTGCGCTCTTTGGTATTCCGAAGAGCATGCTTGTTTGAGTATCAGTAAACACCTCACCTCTATTTTCTCTTGGGAAAATAGAGATGGACTTGAGCT----CTCCCAACACTGCTTGC-------------------AGTGGCGGGTTGCTTGAAATGCAGGTGCAGCTGGACTT-----GGTCTGAGCTAA------AAGCATATTTA-TTTAGTCCCGTCAAACGGATTATTACT--TTTGCTGCAG-----CTAACATAAAGG--ATCACTGTCCGATCGCTG-ACTGATGCAGGATTCACATTTTGTCCT----------------TTGGACGATTTGTAAACTCGATCTCAAATCAAGTAAGACTACCCGCTGA
	Mortierella_pseudozygospora_JX975880  CGAAATGCGATACGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCATATTGCGCTCTCTGGTATTCCGGAGAGCATGCTTGTTTGAGTATCAGTAAACACCTCAAATCCCTCTACTTGTTGGAGGA---ATTTGGACTTGAGCA----ATCCCAACT----------TTTCGAAAGA-------GAAGGCGGGTTGCTTGAAATGCAGGTGCAGCTAGATTCTTT--CTTCTGAGCTAT------AAGCATACTTA-TTTAATCCCGTCAAACGGATTATTACT--TTTGCTGCAG-----CTAACATAAAGGTTGAAGAGTCGCTATGGCTG-ACTGATGCAGGATTTAACATTTCGC------------------GCAAGCGATTTGTAAACTCGATCTCAAATCAAGCAAGACTACCCGCTGA
	Mortierella_sp._OTU_1256              CGAAATGCGATACGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCATATTGCGCTCTCTGGTATTCCGGAGAGCATGCTTGTTTGAGTATCAGTAAACACCTCAAATCCCTCTACTTGTTGGAGGA---ATTTGGACTTGAGCA----ATCCCAACT----------TTTCGAAAGA-------GAAGGCGGGTTGCTTGAAATGCAGGTGCAGCTAGATTCTTT--CTTCTGAGCTAT------AAGCATACTTA-TTTAATCCCGTCAAACGGATTATTACT--TTTGCTGCAG-----CTAACATAAAGGTTGAAGAGTCGCTATGGCTG-ACTGATGCAGGATTTAACATGTCGC------------------GCAAGCGATCTGTAAACTCGATCTCAAATCAAGCAAGACTACCCGCTGA
	Mortierella_parazychae_HQ630283       CGAAATGCGATACGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCATATTGCGCTCTCTGGTATTCCGGAGAGCATGCTTGTTTGAGTATCAGTAACACCCTCAAAGTCTTTTTTTTTGTTAAAAAAGAATTTGGTCTTGAGTT----TTCCCAACG----------CGTTAAAGAATATTTTTCGTGGCGGGTTACTTGAAATACAGGTGCGGCCGAGTCTCTCA-ACTCTGGGCTAA------AAGCATATCTTAGTTGATCCCGTTAAACGGATTATCATTTTTTTGCTGCAG-----CCAACTTATAAA--GGAGTTTGACTTGCGCTG-ACTGATGCAGGAATTAAGAAATAAAAAAGTTCTCTTTT-----TTATTCCTTAACAAAACTCGATCTCAAAT--------------------
	Mortierella_rostafinskii_HQ630358     CGAAATGCGATACGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCTCTCTGGTATTCCGGAGAGCATGCTTGTTTGAGTATCAGTAAACACCTCAAAGAAAAAATATATTTT----TTTTTTTTGGATTTGAGCATTTTATCCCAACATGTAGCACAAACTTTCTGTTTTGTTATTTTGGCGGGTCGCTTAAAATTCAGGTGGCAGTTGGTTTTCTACTTTCTGGA--AACAACTTAGGCATATCTTGCTTAGTCCCGTCAAAAGGATTATCATG--CTTGCTGAGGTGGTTTTCGTTCAAACG--AGAGAAGAAAACCTGCTGCACTGATGCAGGAGTTTTTTTTTTTTTTTATAA-----------AAGAAAAAAAACCAAACTCGATCTC------------------------
	Mortierella_strangulata_HQ630359      CGAAATGCGATACGTAATGTGAATTGCAAAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCTCTCTGGTATTCCGGAAAGCATGCTTGTTTGAGTATCAGTAAACACCTCAAAAAAATTATATATTTT----------TTGGATTTGAGCAC---TTCCCAAC-----------ACCACCACTAGTTTGGTGGCGGCGGGTGGCTTGAAATTCAGGTGGCAGCTGGTTTTCTGCATTCTGGAACAAACACCTAGGCATATCTTGTTTAGTCCTGTCAAAAGGATTATCATG--CTTGCTGAAGGGTTTTTCCACTTGATG--AAAGTAGAAAGCGAGATGCACTGATGCAGGAGTTTTTTTTTTTT------------------AAAAAAAAAAACCAAACTCGATCTC------------------------

;



END;

BEGIN ASSUMPTIONS;
	TYPESET * UNTITLED   =  unord:  1- 440;

END;

BEGIN NOTES;

	TAXABITS   NAME = newlyAddedTaxon on =  1 -  11;

END;

BEGIN CODONS;
	CODESET * UNTITLED   =  universal:  1- 440;


END;

BEGIN MESQUITECHARMODELS;
	ProbModelSet * UNTITLED   =  'Jukes-Cantor':  1- 440;
END;

BEGIN TREES;
	Title 'Mortierella-5';
	ID 017574e2655417;
	LINK Taxa = Taxa;
	TRANSLATE
[0] 		1 Mortierella_ambigua_JX976067,
[1] 		2 Mortierella_ambigua_JX976062,
[2] 		3 Mortierella_capitata_JX976008,
[3] 		4 Mortierella_wolfii_HQ630305,
[4] 		5 Mortierella_wolfii_HQ630304,
[5] 		6 Mortierella_microzygospora_HQ630317,
[6] 		7 Mortierella_pseudozygospora_JX975880,
[7] 		8 Mortierella_sp._OTU_1256,
[8] 		9 Mortierella_parazychae_HQ630283,
[9] 		10 Mortierella_rostafinskii_HQ630358,
[10] 		11 Mortierella_strangulata_HQ630359;
	TREE Imported_tree_1 = ((10:0.039766302194839266,11:0.1589881355520061)100:0.3528561969173688,(9:0.44147095582884727,((7:0.00000084549102320891,8:0.005820460198913248)96:0.0814543722229504,(6:0.07524730402210075,((1:0.015587326510945214,2:0.010624033327058344)86:0.028204436220015783,(3:0.022631068701974174,(4:0.0018707890375129752,5:0.008688928145327861):0.13498083640494044)100:0.05393315915607277)71:0.2973087393676943)93:0.12051159067299241)83:0.0646702444557182)70:0.3528561969173688)[% ] [% ] [%  setBetweenBits = selected ];

END;


Begin MESQUITE;
		MESQUITESCRIPTVERSION 2;
		TITLE AUTO;
		tell ProjectCoordinator;
		timeSaved 1603983873452;
		getEmployee #mesquite.minimal.ManageTaxa.ManageTaxa;
		tell It;
			setID 0 6737377427094368890;
			tell It;
				attachments ;
			endTell;
		endTell;
		getEmployee #mesquite.charMatrices.ManageCharacters.ManageCharacters;
		tell It;
			setID 0 5586974104200046059;
			mqVersion 361;
			checksumv 0 3 3033865540 null  getNumChars 440 numChars 440 getNumTaxa 11 numTaxa 11   short true   bits 15   states 15   sumSquaresStatesOnly 102574.0 sumSquares 102574.0 longCompressibleToShort false usingShortMatrix true   NumFiles 1 NumMatrices 1;
			mqVersion;
		endTell;
		getWindow;
		tell It;
			suppress;
			setResourcesState true false 274;
			setPopoutState 300;
			setExplanationSize 0;
			setAnnotationSize 0;
			setFontIncAnnot 0;
			setFontIncExp 0;
			setSize 1173 620;
			setLocation 8 23;
			setFont SanSerif;
			setFontSize 10;
			getToolPalette;
			tell It;
			endTell;
			setActive;
			desuppress;
		endTell;
		getEmployee  #mesquite.charMatrices.BasicDataWindowCoord.BasicDataWindowCoord;
		tell It;
			showDataWindow #5586974104200046059 #mesquite.charMatrices.BasicDataWindowMaker.BasicDataWindowMaker;
			tell It;
				getWindow;
				tell It;
					setExplanationSize 30;
					setAnnotationSize 20;
					setFontIncAnnot 0;
					setFontIncExp 0;
					setSize 0 -72;
					setLocation 8 23;
					setFont SanSerif;
					setFontSize 10;
					getToolPalette;
					tell It;
						setTool mesquite.charMatrices.BasicDataWindowMaker.BasicDataWindow.arrow;
					endTell;
					setTool mesquite.charMatrices.BasicDataWindowMaker.BasicDataWindow.arrow;
					colorCells  #mesquite.charMatrices.ColorByState.ColorByState;
				tell It;
					setStateLimit 9;
					toggleUniformMaximum on;
				endTell;
					colorRowNames  #mesquite.charMatrices.TaxonGroupColor.TaxonGroupColor;
					colorColumnNames  #mesquite.charMatrices.CharGroupColor.CharGroupColor;
					colorText  #mesquite.charMatrices.NoColor.NoColor;
					setBackground White;
					toggleShowNames on;
					toggleShowTaxonNames on;
					toggleTight off;
					toggleThinRows off;
					toggleShowChanges off;
					toggleSeparateLines off;
					toggleShowStates on;
					toggleReduceCellBorders off;
					toggleAutoWCharNames off;
					toggleAutoTaxonNames off;
					toggleShowDefaultCharNames off;
					toggleConstrainCW on;
					toggleBirdsEye off;
					toggleShowPaleGrid off;
					toggleShowPaleCellColors off;
					toggleShowPaleExcluded off;
					togglePaleInapplicable on;
					togglePaleMissing off;
					toggleShowBoldCellText off;
					toggleAllowAutosize off;
					toggleColorsPanel off;
					toggleLinkedScrolling on;
					toggleScrollLinkedTables off;
				endTell;
				getWindow;
				tell It;
					forceAutosize;
				endTell;
				hideWindow;
				getEmployee #mesquite.charMatrices.AlterData.AlterData;
				tell It;
					toggleBySubmenus off;
				endTell;
				getEmployee #mesquite.charMatrices.ColorCells.ColorCells;
				tell It;
					setColor Red;
					removeColor off;
				endTell;
				getEmployee #mesquite.categ.StateNamesStrip.StateNamesStrip;
				tell It;
					showStrip off;
				endTell;
				getEmployee #mesquite.charMatrices.AnnotPanel.AnnotPanel;
				tell It;
					togglePanel off;
				endTell;
				getEmployee #mesquite.charMatrices.CharReferenceStrip.CharReferenceStrip;
				tell It;
					showStrip off;
				endTell;
				getEmployee #mesquite.charMatrices.QuickKeySelector.QuickKeySelector;
				tell It;
					autotabOff;
				endTell;
				getEmployee #mesquite.charMatrices.SelSummaryStrip.SelSummaryStrip;
				tell It;
					showStrip off;
				endTell;
				getEmployee #mesquite.align.AlignToDropped.AlignToDropped;
				tell It;
					gapCosts 8 3 2 2;
					subCosts  10 5 10 10 10 5 5 10 10 10 5 10;
				endTell;
				getEmployee #mesquite.molec.ColorByAA.ColorByAA;
				tell It;
					emphasizeDegeneracy off;
				endTell;
				getEmployee #mesquite.molec.SequenceInfoEditor.SequenceInfoEditor;
				tell It;
					panelOpen false;
				endTell;
			endTell;
		endTell;
		endTell;
end;