#NEXUS BEGIN DATA; DIMENSIONS NTAX=31 NCHAR=740; FORMAT DATATYPE = DNA GAP = - MISSING = ?; MATRIX Acer_cappadocicum_sinicum AGCTCCTTCTACAAATGGATAAGATTTCGAT-CTTCGTGTATACACGTTTTTGAAAATAACGGAGCAATGCCGATCCTCTTCCAATAA------ATCGGTATTGCTCC---------GTTATTTAT--------TAGG---TTTTTTTTTCAA-TTTGTTATTTTT------GTCCTTTTTTGACTTC------------------------------AACAAAATACAAAGCTTTTTTATGCC-------TTT-TTAT----------------------------TTAGTATCATATTTCTAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------ATAATA--TAAAAAGGTTTGGAAATTTATGCCTCTTG------------------------TCTCTTCATTTGTATCTTCATAAT------------------TAAGGTAAGATAAAAAAA------------------------------------GATGATTAATGGTAGAAATTGGAAT-CTTTTTATTTTGTAATTT------------------------------TGTAGCTAGT--GGGGGGGCGGATGTAGCCAAGTGGATCA Acer_negundo AGCTCCTTCTACAAATGGATAAGATTTCGAT-CTTCGTGTATACGAGTTTTTGAAAATAACGGAGCAATGCCGATCCTCTTCAAATAAATCGGTATCGGTATTGCTCCGTTATTT--ATTATTTAT--------TAGG-TTTTTTTTTTTCAA-TTTGTTATTTTT------GTCCTTTTTTTACTTC------------------------------ACCAAAACACAAAG-TTTTTTAGGCC-------TTT-TTAT----------------------------TTAGTATCAAATAATTACTA--------------CGTGCTAATAATTA-AA--------------------TTACCCTTT-------------------------ATTTATTATGACTTTACAG-------------TTTATTATTTT-GAGTCAATT-------TTCTAT-----------ATAATA--AAAAAAATTTGGGAAATTTAGGCCCCTTG------------------------TCCCTTCATTTGTATCTTCATAAT------------------TAAGGTAAGATAAAAAAAA------------------------------------ATGATTAAGGGTAAAAATTGCAAT-CTTTTTATTTTGTAATTT------------------------------TGTAGCTAGT?????????????????????????????? Acer_palmatum AGCTCCTTCTACAAATGGATAAGATTTCGAT-CTTCGTGTATACACGTTTTTGAAAATAACGGAGCAATGCCGATCCTCTTCCAATAA------ATCGGTATTGCTCC---------GTTATTTAT--------TAGG---TTTTTTTTTCAA-TTTGTTATTTTT------GTCCTTTTTTGACTTC------------------------------AACAAAACACAAAGCTTTTTTATGCC-------TTT-TTAT----------------------------TTAGTATCATATTATTACTA--------------CGTGCTAATAATTA-AA--------------------TTAGTCTTT-AGTTATTTTTTAGTTATTTT----AGTTATTATGACTTTACAG-------------TTTATTATTTT-GAGTCAATTTTCTATATTCTAT-----------ATAATA--TAAAAAAGTTTGGAAATTTATGCCTCTTG------------------------TCTCTTCATTTGTATCTTCATAAT------------------TAAGGTAAGATAAAAAAA------------------------------------GATGATTAATGGTAGAAATTGGAAT-CTTTTTATTTTGTAATTT------------------------------TGTAGCTAGT--GGGGGGGCGGATGTAGCCAAGTGGATCA Acer_sacharinum AGCTCCTTCTACAAATGGATAAGATTTCGAT-CTTTGTGTATACGAGTTTTTGAAAATAACGGAGCAATGCCGATCCTCTTCCAATAA------ATCGGTATTGCTCC---------GTTATTTAT--------TAGG---TTTTTTTTTCAA-TTTGTTATTTTT------GTCCTTTTTTCACTTC--------------------TTTTGACTTCAACAAAACACAAAGTTTTTTTATGCC-------TTT-TTAT----------------------------TTAGTATCATATTATTACTA--------------CGTGCTAATATACG-TG--------CTAATAATTAAATTCGCCTTT-------------------------AGTTATTATGACTTTACAG-------------TTTATTATTTT-GAGTCAATTTTCTATTTTCTAT-----------ATAATA--TAAAAAAGTTTGGAAATTTATGCCCCTTG------------------------TCTCTTCATTTGTATCTTCATAAT------------------TAAGGTAAGATAAAAAAA------------------------------------GATGATTAAGGGTAAAAATTTCAAT-CTTTTTATTTTGTAATTT------------------------------TGTAGCTAGT---GGGGGGCGGATGTAGCCAAGTGGATCA Acer_triflorum AGCTCCTTCTACAAATGGATAAGATTTCGAT-CTTCGTGTATACGAGTTTTTGAAAATAACGGAGCAATGCCGATCCTCTTCCAATAA------ATCGGTATTGCTCCGTTATTTATGTTATTTAT--------TAGG-TTTTTTTTTTTCAA-TTTGTTATTTTT------GTCCTTTTTTGACTTC------------------------------AACAAAACACAAAGTTTTTTTATGCC-------TTT-TTAT----------------------------TTAGTATCATATTATTACTA--------------CGTGCTAATAGCTA-AT---AATTAAATTTAATTAAATTAGCCTTT-------------------------ATTTATTATGACTTTACAG-------------TTTATTATTTT-GAGTCAATTTTCTATTTTCTAA-----------AAAAAA--TAAAAAAGTTTGGAAATTTATGCCCCTTGTCTCTTAATTTGTATCTTCATAATTCTCTTAATTTGTATCTTCATAAT------------------TAAGGTAAAAAAAAAAAAA-----------------------------------GATGATTAAGGGGAAAAATTTCAAT-CTTTTTATCTTGTAATTT------------------------------TGTA?CTAG----GGGGGGCGGATGTAGCCAAGGGGATCA Aesculus_californica AGCTCCATCTACAAATGGATAAGATTTCGATGCTTCGTGTATACCAGTTTTTGAAAATAACGGAGCAATACCAAT----------TTA-------TTGGTATTGCTCC---------GTTATTTAT--------TAGG-----------T----TTTTTTATTTAT------GTCCTTTTTTGACTTC------------------------------AACAAAACACAAAGTTTTTTTATGCC-------TTTGTTAT----------------------------TTAGTATCATATTATTACTA--------------TGTGCTAATAATCA-AA--------------------TTTGCCTTT-AGTTA------------------TTGTTATTATTACTTTACAGTCAG---------ATTCT--TTTTAGGGTCAA---------TTTAAT-----------ATAAAA---AAGAAAGTTTGGCATTTTCTGCCTCTTG------------------------CCTCTTCATTTGTATCTTCAGAAT------------------TAAGGTAAGATAAAAAAATAAAGATAAAAAAA----------------------GATGATCAATGTTAGAAATTTCAAT-CTTTGTATTTTTTTTT???????????????????????????????????????????????????????????????????????? Aesculus_chinensis_2 AGCTCCATCTACAAATGGATAAGATTTCGAT-CTTCGTGTATACGAGTTTTTGAAAATAACGGAGCAATA-----------CCAATAAA------TTGGTATTGCTCC---------GTTATTTAT--------TAGG------TTTTTTTGA-TTTAT-------------GTCCTTTTTTTACTTC------------------------------AACAAAACACAAAGTTTTTTTATGCC-------TTT-TTAT----------------------------TTAGTATCATATTATTACTA--------------TGTGCTAATAATGA-AA--------------------TTTGCCTTT-AGTTA------------------TTGTTATTATTACTTTACAGTCAG---------ATTATTATTTTAGGGTCAA---------TTTAATATAAAAA----ATAAAA---AAGAAAGTTTGGCATTTTC-------TG------------------------CCTCTTCATTTGTATCTTCAGAAT------------------TAAGGTAAGATAAAAAAATAAAGATAAAAAAAA----TGATCAATAAAAAA---GATGATCAATGTTAAAAATTTCAAT-CTTTGTATTTTTTTTTAATTT---------------------------TGTAGATAGTGGGGGGGGGCGGATGTAGCCAAGTGGATCA Aesculus_flava_1 AGCTCCATCTACAAATGGATAAGATTTCGAT-CTTCGTGTATACGAGTTTTTGAAAATAACGGAGCAATA-----------CCAATAAA------TTGGTATTGCTCC---------GTTATTTAT--------TAGG-----TTTTTTTTTA-TTTCT-------------GTCCTTTTTTTACTTC------------------------------AACAAAACACAAAG-TTTTTTATGCC-------TTT-TTAT----------------------------TTAGTATCATATTATTACTA--------------TGTGCTAATAATTT-AA--------------------TTTGCTTTT-AGTTA------------------TTGTTATTATTACTTTACAGTCAG---------ATTATTATTTTAGAGTCAA---------TTTAAT-----------ATAAAA---AAGAAAGTTTGGCATTTTCTGCCTCTTG------------------------CCTCTTCATTTGTATCTTCAGAAT------------------TAAGGTAAGATAAAAAAATAAAGATAAAAAAA----------------------GATGATCAATGTTAGAAATTTCAAT-CTTTGTATTTTTTTTTTATTTT?????????????????????????????????????????????????????????????????? Aesculus_glabra_arguta_1 AGCTCTATCTACAAATGGATAAGATTTCGAT-CTTCGTGTATACGAGTTTTTGAAAATAACGGAGCAATA-----------CCAATTTA------TTGGTATTGCTCC---------GTTATTTAT--------TAGG------TTTTTTTTA-TTTCT-------------GTCCTTTTTTTACTTC------------------------------AACAAAACACAAAG-TGTTTTATGCC-------TTT-TTATTTAGTATCATATTATTACTATGTGCTAATTAGTATCATATTATTACTA--------------TGTGCTAATAATTT-AA-TTATGTGCTAATAATTTAATTTGCCTTT-AGTTA------------------TTGTTATTATTACTTTACAGTCAG---------ATTATTATTTTAGAGTCAA---------TTTAAT-----------ATAAAA---AAGAAAGTTTGGCATTTTCTGCCTCTTG------------------------CCTCTTCATTTGTATCTTCAGAAT------------------TAAGGTAAGATAAAAAAATAAAGATAAAAAAA----------------------GATGATCAATGTTAGAAATTTCAAT-CTTTGTATTTTTTTTTTATTTT--------------------------TGTAGATAGT---GGGGGGCGGATGTAGCCAAGTGGATCA Aesculus_glabra_glabra AGCTCCATCTACAAATGGATAAGATTTCGAT-CTTCGTGTATACGAGTTTTTGAAAATAACGGAGCAATA-----------CCAATAAA------TTGGTATTGCTCC---------GTTATTTAT--------TAGG-----TTTTTTTTTA-TTTCT-------------GTCCTTTTTTTACTTC------------------------------AACAAAACACAAAG-TTTTTTATGCC-------TTT-TTAT----------------------------TTAGTATCATATTATTACTA--------------TGTGCTAATAATTT-AT-----GTGCTAATAATTTCATTTGCCTTT-AGTTA------------------TTGTTATTATTACTTTACAGTCAG---------ATTATTATTTTAGAGTCAA---------TTTAAT-----------ATAAAA---AAGAAAGTTTGGCATTTTCTGCCTCTTG------------------------CCTCTTCATTTGTATCTTCAGAAT------------------TAAGGTAAGATAAAAAAATAAAGATAAAAAAA----------------------GATGATCAATGTTAGAAATTTCAAT-CTTTGTATTTTTTTTTTATTT---------------------------TGTAGATAGT---GGGGGGCGGATGTAGCCAAGTGGATCA Aesculus_hippocastanum ???????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????AGG-------TTTTTTTA-TTTAT-------------GTCCTTTTTCGACTTC------------------------------AACAAAACACAAAGTTTTTTTATGCC-------TTT-TTAT----------------------------TTAGTATCATATTATTACTA--------------TGAGCTAATAATTA-AA--------------------TTTGCCTTT-AGTTA------------------TTGTTATTATTACTTTACAGTTAGAACAGTCAGATTATTATTTTAGGGTCAA---------TTTAAT-----------ATAAAA---AAGAAAGTTTGGCATTTTCTGCCTCTTG------------------------CCTCTTCATTTGTATCTTCAAAAT------------------TAAGGTAAGATAAAAAAATAAGCATAAAAAAA----------------------AATGATCAATGTTAGAAATTTCGTT-C--------------------------------------------------------------------------------------- Aesculus_parryi AGCTCCATCTACAAATGGATAAGATTTCGAT-CTTCGTGTATACGAGTTTTTGAAAATAACGGAGCAATA-----------CCAATTTA------TTGGTATTGCTCC---------GTTATTTAT--------TAGG---TTTTTTTTTTGA-TTTCT-------------GTCCTTTTTTTACTTC------------------------------AACAAAACACAAAG-TTTTTTATGCCTTTTTATTTT-TTAT----------------------------TTAGTATCATATTATTACTA--------------TGTGCTAATAATTT-AA--------------------TTTGCCTTT-AGTTA------------------TTGTTATTATTACTTTACAGTCAG---------ATTATTATTTTAAAGTCAA---------TTTAAT-----------ATAAAA---AAGAAAGTTTGGCATTTTCTGCCTCTTG------------------------CCTCTTCATTTGTATCTTCAGAAT------------------TAAGGTAAGATAAAAAAAGAAAGATAAAAAAA----------------------GATGATCAATGTTAGAAATTTCAAT-CTTTGTATTTTTTTTTTTTTTTTT-------------------------GTAAATA---GGGGGGGGGGGATGTACCCAAGGGGATCA Aesculus_parviflora_2 AGCTCCATCCACAAATGGATAAGATTTCGAT-CTTCGTGTATACGAGTTTTTGAAAATAACGGAGCAATA-----------CCAATAAA------TTGGTATTGCTCC---------GTTATTTAT--------TAGG-----TTTTTTTTGA-TTTAT-------------GTCCTTTTTTTACTTC------------------------------AACAAAACACAAAGTTTTTTTATGCC-------TTT-TTAT----------------------------TTAGTATCATATTATTACTATGTGCT--------TGTGCTAATAATGA-AA--------------------TTTGCCTTT-AGTTA------------------TTGTTATTATTACTTTACAGTCAG---------ATTATTATTTTAGGGTCAA---------TTTAAT-----------ATAAAA---AAGAAAGTTTGGCATTTTCTGCCTCTTG------------------------CCTCTTTATTTGTATCTTCAGAAT------------------TAAGGTAAGATAAAAAAA------------------------------------GATGATCAATGTTAGAAATTTCAAT-CTTTGTATTTTTTTTTTTATTT--------------------------TGTAGATAGT---GGGGGGCGGATGTAGCCAAGTGGATCA Aesculus_parviflora_1 AGTTCCATCCACAAATGGATAAGATTTCGAT-CTTCGTGTATACGAGTTTTTGAAAATAACGGAGCAATA-----------CCAATAAA------TTGGTATTGCTCC---------GTTATTTATTTATTTATTAGG------TTTTTTTGA-TTTAT-------------GTCCTTTTTTTACTTC------------------------------AACAAAACACAAAGTTTTTTTATGCC-------TTT-TTAT----------------------------TTAGTATCATATTATTACTA--------------TGTGCTAATAATGA-AA--------------------TTTGCCTTT-AGTTA------------------TTGTTATTATTACTTTACAGTCAG---------ATTATTATTTTAGGGTCAA---------TTTAAT-----------ATAAAA---AAGAAAGTTTGGCATTTTCTGCCTCTTG------------------------CCTCTTTATTTGTATCTTCAGAAT------------------TAAGGTAAGATAAAAAAA------------------------------------GATGATCAATGTTAGAAATTTCAAT-CTTTGTATTTTTTTTTTTTATTT-------------------------T??????????????????????????????????????? Aesculus_pavia_flavescens_1 AGCTCTATCTACAAATGGATAAGATTTCGAT-CTTCGTGTATACGAGTTTTTGAAAATAACGGAGCAATA-----------CCAATAAA------TTGGTATTGCTCC---------GTTATTTAT--------TAGG------TTTTTTTTA-TTTCT-------------GTCCTTTTTTTACTTC------------------------------AACAAAACACAAAG-TGTTTTATGCC-------TTT-TTAT----------------------------TTAGTATCATATTATTACTA--------------TGTGCTAATAATTT-AA--------------------TTTGCCTTT-AGTTA------------------TTGTTATTATTACTTTACAGTCAG---------ATTATTATTTTAGAGTCAA---------TTTAAT-----------ATAAAA---AAGAAAGTTTGGCATTTTCTGCCTCTTG------------------------CCTCTTCATTTGTATCTTCAGAAT------------------TAAGGTAAGATAAAAAAATAAAGATAAAAAAA----------------------GATGATCAATGTTAGAAATTTCAAT-CTTTGTATTTTTTTTTTATTT---------------------------TGTAGATAGT---GGGGGGCGGATGTAGCCAAGTGGATCA Aesculus_pavia_flavescens_2 AGCTCTATCTACAAATGGATAAGATTTCGAT-CTTCGTGTATACGAGTTTTTGAAAATAACGGAGCAATA-----------CCAATAAA------TTGGTATTGCTCC---------GTTATTTAT--------TAGG------TTTTTTTTA-TTTCT-------------GTCCTTTTTTTACTTC------------------------------AACAAAACACAAAG-TGTTTTATGCC-------TTT-TTAT----------------------------TTAGTATCATATTATTACTA--------------TGTGCTAATAATTT-AA--------------------TTTGCCTTT-CGTTA------------------TTGTTATTATTACTTTACAGTCAG---------ATTATTATTTTAGAGTCAA---------TTTAAT-----------ATAAAA---AAGAAAGTTTGGCATTTTCTGCCTCTTG------------------------CCTCTTCATTTGTATCTTCAGAAT------------------TAAGGTAAGATAAAAAAATAAAGATAAAAAAA----------------------GATGATCAATGTTAGAAATTTCAAT-CTTTGTATTTTTTTTTTATTT---------------------------TGTAGATAGT---GGGGGGCGGATGTAGCCAAGTGGATCA Aesculus_pavia_pavia_1 AGCTCCATCTACAAATGGATAAGATTTCGAT-CTTCGTGTATACGAGTTTTTGAAAATAACGGAGCAATA-----------CCAATAAA------TTGGTATTGCTCC---------GTTATTTAT--------TAGG----TTTTTTTTTTA-TTTCT-------------GTCCTTTTTTTACTTC------------------------------AACAAAACACAAAG-TTTTTTATGCC-------TTT-TTAT----------------------------TTAGTATCATATTATTACTA--------------TGTGCTAATTATTT-AA--------------------TTTGCCTTT-AGTTA------------------TTGTTATTATTACTTTACAGCCAG---------ATTATTATTTTAGAGTCAA---------TTTAAT-----------ATAAAA---AAGAAAGTTTGGCATTTTCTGCCTCTTG------------------------CCTCTTCATTTGTATCTTCAAAAT------------------TAAGGTAAAATAAAAAAATAAAGATAAAAAAA----------------------GATGATCAAGGTTAAAAATTTCAAT-CTTTGTATTTTTTTTTTTTTTTTTT---------------------------------------------ATGTACCCAAGGGGATCA Aesculus_pavia_pavia_2 ????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????GG-----TTTTTTTTTA-TTTCT-------------GCCCTTTTTTTACTTC------------------------------AACAAAACACAAAG-TTTTTTATGCC-------TTT-TTAT----------------------------TTAGTATCATATTATTACTA--------------TGTGC?AATAATTT-CA--------------------TTTGCCTTT-AGTTA------------------TTGTTATTATTACTTTACAGTCAG---------ATTATTATTTTAGAGTCAA---------TTTAAT-----------ATAAAA---AAGAAAGTTTGGCATTTTC?GCCTCTTG------------------------CCTCTTCATTTGTATCTTCAGAAT------------------TAAGGTAAAATAAAAAAATAAAGATAAAAAAA----------------------GATGATCAATGTTAGAAATTTCAAT-CTTTGTATTTTTTTTTT??????????????????????????????????????????????????????????????????????? Aesculus_sylvatica_1 ????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????GTCCTTTTTTTACTTC------------------------------AACAAAACACAAAG-TTTTTTATGCC-------TTT-TTAT----------------------------TTAGTATCATATTATTACTA--------------TGTGCTAATTATTT-AATTTATGTGCTAATTATTTAATTTGCCTTT-AGTTA------------------TTGTTATTATTACTTTACAGTCAG---------ATTATTATTTTATAGTCAA---------TTTAAT-----------ATAAAA---AAGAAAGTTTGGCATTTTCTGCCCCTTG------------------------CCTCTTCATTTGTATCTTCATAAT------------------TAAGGTAAGATAAAAAAATAAAGATAAAAAAA----------------------GATAATCAAT???????????????????????????????????????????????????????????????????????????????????????????????????????? Aesculus_wangii AGCTCCATCTACAAATGGATAAGATTTCGAT-CTTCGTGTATACGAGTTTTTGAAAATAACGGAGCAATA-----------GCAATTTA------TTGCTATTGCTCC---------GTTATTTAT--------TAGG-----TTTTTTTTGA-TTTAT-------------GTCCTTTTTTTACTTC------------------------------AACAAAACACAAAGTTTTTTTATGCC-------TTT-TTAT----------------------------TTAGTATCATATTATTACTA--------------TGTGCTAATAATGA-AA--------------------TTTGCCTTT-AGTTA------------------TTGTTATTATTACTTTCCAGTCAG---------ATTATTATTTTAGGGTCAA---------TTTAAT-----------ATAAAA---AAGAAAGTTTGGCATTTTCTGCCTCTTG------------------------CCTCTTCATTTGTATCTTCAGAAT------------------TAAGGTAAGATAAAAAAATAAAGATAAAAAAAA----TGATCAATAAAAAA---GATGATCAATGTTAGAAATTTCAAT-CTTTGTATTTTTTTTTTTTATTTT???????????????????????????????????????????????????????????????? Aesculus_wilsonii_1 AGCTCCATCTACAAATGGATAAGATTTCGAT-CTTCGTGTATACGAGTTTTTGAAAATAACGGAGCAATA-----------CCAATAAA------TTGGTATTGCTCC---------GTTATTTAT--------TAGG------TTTTTTTGA-TTTAT-------------GTCCTTTTTTTACTTC------------------------------AACAAAACACAAAGTTTTTTTATGCC-------TTT-TTAT----------------------------TTAGTATCATATTATTACTA--------------TGTGCTAATAATGA-AA--------------------TTTGCCTTT-AGTTA------------------TTGTTATTATTACTTTACAGTAAG---------ATTATTATTTTAGGGTCAA---------TTTAAT-----------ATAAAA---AAGAAAGTTTGGCATTTTC-------TG------------------------CCTCTTCATTTGTATCTTCAGAAT------------------TAAGGTAAGATAAAAAAATAAAGATAAAAAAAA----TGATCAATAAAAAA---GATGATCAATGTTAGAAATTTCAAT-CTTTGTATTTTTTTTTT??????????????????????????????????????????????????????????????????????? Aesculus_wilsonii_2 AGCTCCATCTACAAATGGATAAGATTTCGAT-CTTCGTGTATACGAGTTTTTGAAAATAACGGAGCAATA-----------CCAATAAA------TTGGTATTGCTCC---------GTTATTTAT--------TAGG----TTTTTTTTTGA-TTTAT-------------GTCCTTTTTTTACTTC------------------------------AACAAAACACAAAGTTTTTTTATGCCTTTTTCTTTT-TTAT----------------------------TTAGTATCATATTATTACTA--------------TGTGCTAATAATGA-AA--------------------TTTGCCTTT-AGTTA------------------TTGTTATTATTACTTTACAGTCAA---------ATTATTATTTTAGGGTCAA---------TTTAAT-----------ATAAAA---AAGAAAGTTTGGCATTTTCTGCCTCTTG------------------------CCTCTTCATTTGTATCTTCAAAAT------------------TAAGGTAAGATAAAAAAATAAAGATAAAAAAAAA---TGATCAATAAAAAA---GATGATCAATGTTAGAAATTTCAAT-CTTTGTATTTTTTTTTT??????????????????????????????????????????????????????????????????????? Billia_hippocastanum_2 AGCTCCATCTACAAATGGATAAGATTTCGAT-CTTCGTGTATACGAGTTTTTGAAAATAACGGAGAAATA-----------CCAATAAA------TTGGTATTGCTCC---------GTTATTTAT--------TAGG-------TTTTTTTA-GTTAT-------------GTCCTTTTTTTACTTC------------------------------AACAAAACACAAAGTTTTTTTATGCC-------TTT-TTAT----------------------------TTAGTATCATATTATTACTA--------------TGTGCTAATAATTC-AA-------TTTGTCTTTAGTTTTTGCCTTT-AGTTA------------------TTGTTATTATTACTTTACAGTCAG---------ATTATTATTTTAGGGTCAA---------TTTAAT-----------ATAAAA---AAAAAAGTTTGGCATTTTCTGCCTCTTG------------------------CCTCTTCATTTGTATCTTCAGAATCATTTGTATCTTCAGAATTAAGGTAAGATAAAAAAATAAAGATAAAAAAAA---------------------GATGATCAATGTTAGAAATTTAAAT-CTTTATATATATATATTTTTTTTTATTT--------------------TGTAGATAGT---GGGGGGCGGATGTAGCCAAGTGGATCA Billia_hippocastanum_3 AGCTCCCTTTACAAATGGATAAGATTTTGA--CTTCGTGTATACGAGTTTTTGAAAATAACGGAGCAATA-----------CCAATTTA------TTGGTATTGCTCC---------GTTATTTAT--------TAGGG------TTTTTTTA-TTTAT-------------GTCCTTTTTTTACTTC------------------------------AACAGAACACAAAGTTTTTTTATGCT-------TTTCTTAT----------------------------TTAGTATCATATTATTACTA--------------TGTGCTAATAATTA-AA--------------------TTTTCCTTT-AGTTA------------------TTGTTATTATTACTTTACAGTCAG---------ATTATTATTTTAGGGTCAA---------TTTAAT-----------ATAAAA---AA--AAGTTTGGCATTTTCTGCCTCTTG------------------------CCTCTTCATTTGTATCTTCAGAAT------------------TAAGGTAAGATAAAAAAA-AAAGATAAAAAAA----------------------GATGATCAATGTTAGAAATTTCAAT-CTTTATATTTTTAAAATTTTGTAGTAATATATTATTTTTTTTTTATTTTGAAAATAG---GGGGGGGCGGATGTACCCAAGTGGATCA Billia_hippocastanum_4 AGTTCCATCTACAAATGGATAAGATTTCGAT-CTTCGTGTATACGAGTTTTTGAAAATAACGGAGCAATA-----------CCAATTTA------TTGGTATTGCTCC---------GTTATTTAT--------TAGGG------TTTTTTTA-TTTAT-------------GTCCTTTTTTTACTTC------------------------------AACAAAACACAAAGTTTTTTTATGCC-------TTT-TTAT----------------------------TTAGTATCATATTATTACTA--------------TGTGCTAATAATTC-AA--------------------TTTGCCTTT-AGTTA------------------TTGTTATTATTACTTTACAGTCAG---------ATTATTACTTTAGGGTCAA---------TTTAAT-----------ATAAAA---AAAAAAGTTTGGCATTTTCTGCCTTGTG------------------------CCTCTTCATTTGTATCTTCAGAAT------------------TAAGGTAAGATAAAAAAATAAAGA-AAAAGAAA---------------------GATGATCAATGTTAGAAATTTCAAT-CTTTCTATATATATATATTTTTTTTATTT-------------------TGTAGATAGT---GGGGGGCGGATGTAGCCAAGTGGATCA Billia_hippocastanum_5 ?GCTCCATCTACAAATGGATAAGATTTCGAT-CTTCGTGTATACGAGTTTTTGAAAATAACGGAGCAATA-----------CCAATTAA------TTGGTATTGCTCC---------GTTATTTAT--------TAGGG------TTTTTTTA-TTTAT-------------GTCCTTTTTTTA?TTC------------------------------AACAAAAC?CAAAGTTTTTTTATGCC-------TTTCTTAT----------------------------TTAGAATCATTTTATTACTA--------------TGGG??AA?AATTA-AA--------------------TTTGCCTTT-TGTTA------------------TTGTTATTTTTACTTTAC?GTCAA---------ATTATTATTTTAGGG?CAA---------TTTAAT-----------ATAAAA---AA--AAGTTTGGCATTTTCTGCCTCTTG------------------------CCTCTTCATTTGTTTTTTCCGAAT------------------TAAGGGAAGATAAAAAAA-AAAAA?AAAAAAA----------------------GATTATCAAAGTTTGAAATTTCAAT-CTGTATATTTTTTAAATTTAGTAGTAATATATATTTTTTTTTGATT--TGTAGATAGT?????????????????????????????? Handeliodendron_bodineri_1 ???????TCTACAAATGGATAAGATTTTGAT-CTTCGTGTATACGAGTTTTTGAAAATAACGTAGCAATA-----------CCAATTTA------TTGGTATTGCTAC---------GTTATTTAT--------TAGG------TTTTTTTTA-TTTT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTAGA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAGT---GGGGGGCGGATGTAGCCAAGTGGATCA Handeliodendron_bodineri_2 ???????????????TGGATAAGATTTTGAT-CTTCGTGTATA-GAGTTTTTGAAAATAACGTAGCAATA-----------CCAATTTA------TTGGTATTGCTAC---------GTTATTTAT--------TAGG------TTTTTTTTA-TTTT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTAGA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAGT---GGGGGGCGGATGTAGCCAAGTGGATCA Keureulteria_bipinnata ???????TCTACAAATGGATAAGATTTCGAT-CTTCGTGTATACGAGTTTTTGAAAATAACGGAGCAATGCCGATTCTCTTCCAAGAAA------TTGGTATTGCTTC---------GTTATTTAT--------TAAC----TTTTTTTTCGA-TTTTTTATTTAC------GTCCTTGTTTTACTTC-----------------------------------AACAAAAAGTATTTTTATGTC-------TTT-TGAT----------------------------TTAGTATCCTATTATTAATA--------------TGTGCTGATAATTTTAA--------------------TTTACCTTTAAGTTATTATTATTTTATAAGTTATTATTATTTTTATTTTCTAGTCAT---------ATTATTATTTTAGACTCAA---------TTTAAT-----------ATAAAA------AAAGTATGGAATTTTCTGTTTCTTG------------------------TATTTTCATTTGTATCTTCCGAAT------------------TAAGGTAAAATAAAAAAATAATCATTAAAAAAAATAAATGATCATACTTTTTACCATGGTAAAAGGTAAAAATTGCATTTTTTCTAATTT--------------------------------------TGTAGATAGT----AGGGGCGGATGTAGCCAAGTGGATTA Sapindus_sp AGCTCCATCTACAAATGGATAAGATTTCGAT-CTTTGTGTATACGAGTTTTTGAAAATAACGGAACAATGCCGACTCTCTTCCAAGAAG------TTGGTATTGCTCC---------GTTATTTAT--------TAGG--TTTTTTTTTTCAATTTTTTTATTTATATTTAGGTCCTTGTTTTACTTC------------------------------AACAAAACAAAAAGTATTTTTATGGT-------TTT-TTAT----------------------------TTAGTATCCTATTATTATTAATTATTTGATATTATGTGATAATAATTA-AA--------------------TTTCCCTTT-------------------------AGTTATTTTGGTTTTACAGTCAT---------ATTATTGGTTTAAAGTCAA---------TTTAAT-----------ATAAAATATAAAAAAGTATAAAATTTTCTGCC-------------------------------------------------GGAT------------------TAAGGTAAGATAAAAAAAGAATCATCAAAAAA----------------------GATGATTAAGGGTAGGAATTGC?CT-CTTTTTTTTTGGTAATTT------------------------------TGTAGAAAGT---AGGGGGC???????????????????? Ungnadia_speciosa AGCTCCATCTACAAATGGATAAGATTTTGAT-CTTCGTGTATACGAGTTTTTGAAAATAACGGAGCAATACCAATTTCTTGGAAGAGAA------TCAGCATTGCTCC---------GTTATTTAT--------TAGGG------TTTTTCAA-TTTTTTATTTAC------GTCCTTGTTTTACTTCAACAAAACAAAAAGCATTTTTCTAATAAATAACAAAACACAAAATATTTTTATGCT-------TTT-TGAT----------------------------TTAGTATCCTATTATTAATA--------------TGTGCTAATAATTG-AA--------------------TTTCCCTTT-------------------------AGTTATTATTACTTTACAGTTAT---------ATTATTATTTTAGAGTCAA---------TTTAAT----------------ATA-AAGAAAATGTGGAATTTTTTGCCTCTTG------------------------TATCTTCATTTGTATCTTCAGAAT------------------TAAGGTAAGA-AAAAAAAGAATGATCAAAAAA----------------------GAGGATCGATGTTAGAAATTGTAATTTTTTTTATTTTGTAATTTTTTAGTTTTATTTTGTAATTT---------TGTAGATAGT---GGGGGGCGGATGTAGCCAAGTGGATCA ; END; Begin MrBayes; Lset nst = 1 rates = invgamma Ngammacat = 10; prset statefreqpr = dirichlet ( 1 , 1 , 1 , 1 ); mcmc stoprule = no ngen = 15000000 nruns = 2 printfreq = 500 samplefreq = 5000 diagnfreq = 5000 nchains = 12 savebrlens = yes; ; End;