#NEXUS [ Title TRAV] begin taxa; dimensions ntax= 90; taxlabels TRAV4_F_Homsap TRAV4_F_Oviari TRAV44S2_F_Oviari TRAV26_1_F_Homsap TRAV26S1_F_Oviari TRAV2_F_Homsap TRAV2_ORF_Oviari TRAV40_F_Homsap TRAV40_P_Turtru TRAV9_1_F_Homsap TRAV9_F_Turtru TRAV9S2_F_Oviari TRAV45_F_Turtru TRAV45S2_F_Oviari TRAV18_F_Homsap TRAV18S1_F_Oviari TRAV3_F_Homsap TRAV3_F_Oviari TRAV16_F_Homsap TRAV16_F_Turtru TRAV16_F_Oviari TRAV42S1_ORF_Oviari TRAV42_1_F_Turtru TRAV42_1D_F_Turtru TRAV8_1_F_Homsap TRAV8_P_Oviari TRAV1_1_F_Homsap TRAV1_F_Oviari TRAV31_P_Homsap TRAV33_P_Homsap TRAV38_1_F_Homsap TRAV38_F_Oviari TRAV38_1_F_Turtru TRAV38_2_P_Turtru TRAV14_DV4_F_Homsap TRAV14_TRDV4_F_Turtru TRAV14S2_F_Oviari TRAV19_F_Homsap TRAV19_P_Turtru TRAV11_F_Homsap TRAV15_P_Homsap TRAV12_1_F_Homsap TRAV12_F_Oviari TRAV29_DV5_F_Homsap TRAV29S1_F_Oviari TRAV23_DV6_F_Homsap TRAV23S1_P_Oviari TRAV32_P_Homsap TRAV13_1_F_Homsap TRAV13_F_Oviari TRAV5_F_Homsap TRAV5_F_Oviari TRAV10_F_Homsap TRAV10_F_Oviari TRAV34_F_Homsap TRAV30_F_Homsap TRAV25_F_Homsap TRAV25S2_F_Oviari TRAV35_F_Homsap TRAV35_P_Oviari TRAV27_F_Homsap TRAV27_F_Oviari TRAV41_P_Turtru TRAV41_F_Oviari TRAV41_F_Homsap TRAV22_F_Homsap TRAV22S2_F_Oviari TRAV43S1_F_Oviari TRAV28_P_Homsap TRAV28S1_F_Oviari TRAV17_F_Homsap TRAV17_F_Turtru TRAV17_F_Oviari TRAV6_F_Homsap TRAV6_P_Oviari TRAV37_P_Homsap TRAV37_F_Turtru TRAV37_P_Oviari TRAV21_F_Homsap TRAV21_F_Oviari TRAV36_DV7_F_Homsap TRAV36_F_Oviari TRAV39_F_Homsap TRAV39_P_Turtru TRAV39_ORF_Oviari TRAV24_F_Homsap TRAV7_F_Homsap TRAV20_F_Homsap TRAV20_1_F_Turtru TRAV20_1D_F_Turtru ; end; begin characters; dimensions nchar= 385; format missing=? gap=- matchchar=. datatype=nucleotide interleave=yes; matrix [!Domain=Data property=Coding CodonStart=1;] TRAV4_F_Homsap ------------------------CTTGCTAAGACCACC--------CAGCCCAT-------CTCCATGGACTCA--- TRAV4_F_Oviari ---------------------------------CTTG.T--------A..A..TC----CCAGC....CAT.ATTGAC TRAV44S2_F_Oviari ------------------------GA..T.G...T....--------....T..G-------T........T.GT--- TRAV26_1_F_Homsap ------------------------GA.............--------......CC-------.........T.GC--- TRAV26S1_F_Oviari ------------------------GA.T..........A--------.....A.A-------...AG....GGGC--- TRAV2_F_Homsap ------------------------AAG.ACC.AGTGTTT--------.....TTC-------.A.AG...CA..T--- TRAV2_ORF_Oviari ------------------------AAA.AGC.AGTATTT--------.....TTC-------.A.TG...T...T--- TRAV40_F_Homsap ------------------------AGCAA.TCAGT..AG--------...A.-------GGG.CAA..AAC.GTC--- TRAV40_P_Turtru ------------------------GAG.AACCAG.GG.AATTCAGTC..A.A..C----AGG.CAAG.CACTG.C--- TRAV9_1_F_Homsap ------------------------GGA.A.TCAGTGGT.--------...A.AGA----AGG.CAAG..CT.C.C--- TRAV9_F_Turtru -------------GACAAACCCGTGAA.ACTCAGTG...--------...ATGGA----TGG.CAA...ACTCTT--- TRAV9S2_F_Oviari ------------------------GGAAACTCAGTG...--------...ATGGA----TGG.CAAG..AGTCGT--- TRAV45_F_Turtru -------------GAGGGACCAATGGA.ACTCAGTG.A.--------...A.AGA----AGG.C.AG..ACTGTC--- TRAV45S2_F_Oviari ------------------------GG..ACTCAGTG.A.--------...A.AGA----AGG...AG..ACTGTC--- TRAV18_F_Homsap ------------------------GGA.ACTC.GTT...--------...A.AGA----AGG.C.AG.TAC.CTC--- TRAV18S1_F_Oviari ------------------------GCA.ACTCAGTA...--------...A.AGA----AGGTGTTG.TAC.CTC--- TRAV3_F_Homsap ------------------------GC.CAGTCAGTGG.T--------.....GGA----AGATCAGG.CA..GTT--- TRAV3_F_Oviari ------------------------GC.CAGTC.GTG..T--------.....AGA----AGATGAGG.CCCTGTC--- TRAV16_F_Homsap -------------------------CCCAG.GAGTG..T--------......GA----GAAGCT.C.CTCTGTC--- TRAV16_F_Turtru -----------AGGAGGAACAAGAGCCCAG.CAGTG..T--------.....TGA----GGA.CA...CTC.GTC--- TRAV16_F_Oviari ------------------------GCCCAG.CAGTG..T--------.....TGA----GAG.CA...CTCTGTG--- TRAV42S1_ORF_Oviari ------------------------GCCCAGTCAGTG...--------.....TGA----CAG..A...CACTGTC--- TRAV42_1_F_Turtru -------------GAGGAGCCGGAGCCCAGTC.GTG...--------.....TGA----CGG.CA...CACTGTC--- TRAV42_1D_F_Turtru -------------GAGGAGCCGGAGCCCAGTC.GTG...--------.....TGA----CGG.CA...CACTGTC--- TRAV8_1_F_Homsap ------------------------GCCCAGTCTGTG.G.--------....AT.A----CCA.CA.G.AATTCTC--- TRAV8_P_Oviari ------------------------GGCCAGTTAGTG...--------.....TGA----TGA.C.TG.TTTGGTC--- TRAV1_1_F_Homsap ------------------------GGACAA.GCCTTGAG--------......TC-------TGAAG..ACAG.T--- TRAV1_F_Oviari ------------------------GGAAAAGGCGTTGAG--------.......C----TGAG.TG.C..CTATG--- TRAV31_P_Homsap ---------------------------CAG.G.GT..TT--------..AT..CA----ACCAG.A..ATCTA.G--- TRAV33_P_Homsap ------------------------GC.CAG..AGTA...--------..AGTTCA----GAC.A.AG.AACTAGG--- TRAV38_1_F_Homsap ------------------------GCCCAG.CAGT...T--------...T.TCA----ACCAGAG...TCTGTG--- TRAV38_F_Oviari ------------------------GCCCAG.CAGT...T--------.....TCA----ACCAGAAGA.TCTGT.--- TRAV38_1_F_Turtru -------------GATCCAGTGTGGCCCAA.T.GT...T--------..A..TCA----ACCAGAAG..TCTGTG--- TRAV38_2_P_Turtru -----------------------GGCCCAG.T.GT...T--------.....TCA----ACCAGAAG..TCTGTG--- TRAV14_DV4_F_Homsap ------------------------GCCCAG....TA..T--------..AA..CA----ACCAGGA...TT.GTG--- TRAV14_TRDV4_F_Turtru --------------ATCCAGTATTGCCCAG...GTA..T--------..AGA.CA----ACCAGTA..ATTAGTG--- TRAV14S2_F_Oviari ------------------------GC.CAG..AGTA..T--------..AGA.CA----ACCAC.A...TCAGTG--- TRAV19_F_Homsap ------------------------GC.CAG...GTA..T--------..AG.GCA----GACTGAA..TTCTGTG--- TRAV19_P_Turtru ------------------------------------------------------------------------------ TRAV11_F_Homsap ------------------------..ACA..CACTGGAG--------...AGTCC----TTCA.T.C..A.TATT--- TRAV15_P_Homsap ------------------------..CCA..TTCTGGAG--------T..AGTCCTTCATTCA.T.C..AGTATC--- TRAV12_1_F_Homsap ------------------------.GGAAGG..GTGGAG--------...GATCC----TGGAC..T.CA.TGTT--- TRAV12_F_Oviari ------------------------.AGAAC.CAGTGGAG--------...AGTCC----TGCA..TC..CCTGTC--- TRAV29_DV5_F_Homsap ------------------------GACCAGC.AGTT.AG--------..AAATTC----ACCA...C..AG.GTC--- TRAV29S1_F_Oviari ------------------------.AGCAGC..GTT.AA--------..AAATCC----TCC....C..AGTGTG--- TRAV23_DV6_F_Homsap ------------------------.AGCAGC..GTG.AA--------..AAGTCC----TCAA..TT..ATAGTC--- TRAV23S1_P_Oviari GGACAACAGAAGGGAAAAAGTGAT.AATAGC..GT..AA--------...AG.CC----TCGA..TC...CAGTC--- TRAV32_P_Homsap ---------------------------AAGG.TGTG.TA--------...AGTTA----TTCAAATC.AA.TGTC--- TRAV13_1_F_Homsap ------------------------GGA.AG..TGTGGAG--------....ATCC----TTCAA..C..AGTGTC--- TRAV13_F_Oviari ------------------------GGGAAC...GTGGAG--------...AGTCC----TTCTA..C..A.TGTC--- TRAV5_F_Homsap ------------------------GGA.AGG.TGTGGAG--------...AGTC.-------T.T.C..AGTGTC--- TRAV5_F_Oviari ------------------------GGA.AA..AGTGGAG--------...TATCC----CTCT.T.CA.AGTGTC--- TRAV10_F_Homsap ------------------------AAAAACC.AGTGGAG--------...AGTCC----TCAG...C..AT.ATC--- TRAV10_F_Oviari ------------------------AAAAACC.AGTGGAA--------...AGTCC----TCCA...C...CAGTC--- TRAV34_F_Homsap ------------------------AGCCAAG.ACTGGAG--------...AGTCC----TCAG...T..AT.GTC--- TRAV30_F_Homsap ---------------------------CAAC.AC.AGTG--------...AGTCC----TCAAG..G..AT.CTC--- TRAV25_F_Homsap ------------------------GGACAAC..GTA.TG--------..AATTCC----TCAG.A.CA.C.TGT.--- TRAV25S2_F_Oviari ------------------------GGACAAC...TA.AG--------..TTTTCC----TGAA...T..CTTCT.--- TRAV35_F_Homsap ------------------------GG.CAAC..CTG.AT--------...AGTCC----TCAA..T...TTTATC--- TRAV35_P_Oviari ------------------------GCCCAAC..CTG.AT--------...AGTCC----TCAG..T...TC.ATT--- TRAV27_F_Homsap ------------------------ACCCAGCT.CTGGAG--------...AG.CC----TCAG.TTC.AAG.ATC--- TRAV27_F_Oviari ------------------------ACCCAGC..CTGGAG--------...AATCC----GAAG.TTC.ACGTATC--- TRAV41_P_Turtru ------------------------AAAAA.G.TGTGGAG--------...AGTCC----CCGG.A.C..AGTG.C--- TRAV41_F_Oviari ------------------------AAAAA.GGAGTGGAG--------...AGTCC----CCGA.A.C..AGTG.C--- TRAV41_F_Homsap ------------------------AAAAA.G.AGTGGAG--------...AGTCC----TCAGAA.C..ACTG.C--- TRAV22_F_Homsap ------------------------GGAATAC.AGTGGAG--------...AGTCC----TCCAGA.C..ATTCTC--- TRAV22S2_F_Oviari ------------------------GGG.TGG.TGTGGAG--------...AGTCC----CCCAG..C..ACTC..--- TRAV43S1_F_Oviari ------------------------GGA.TG...GTGGAG--------...AGTCC----TTCAGT.T..AG.CTC--- TRAV28_P_Homsap ------------------------------..AGTGGAG--------...AGTCC----TCAGGT.C..AT.CTC--- TRAV28S1_F_Oviari ------------------------.AGATG...GTGGAG--------...AGTCC----TGGGGTTT..AC.CTC--- TRAV17_F_Homsap ------------------------AG.CAAC..GGAGAA--------G..GATCC----TCAGG..T..AG.ATC--- TRAV17_F_Turtru -----------------GGTGAATAGCCAGC.AGGAGAA--------G..AATC.----TCAGG..C..AG.ATC--- TRAV17_F_Oviari ------------------------AGCCAGC.AGGAGAA--------...AATC.----GCAGA..C..AG.ATC--- TRAV6_F_Homsap ------------------------AGCCAA....TAGAA--------...AATTC----CGAGG..C..A..ATT--- TRAV6_P_Oviari ------------------------AGCCAA....TGGAA--------...GATCC----CTAGC..C...G..TT--- TRAV37_P_Homsap ------------------------.AACTGCCAGTGGAA--------...AATGC----TCCT...C..A.AGTC--- TRAV37_F_Turtru ------------------------GG.CAA.T.GA------------..A..AC.----GGTGGAA.A.A.AGTC--- TRAV37_P_Oviari -----------------------A.AAC.ACT.GTGGAA--------...AA--------------------ATC--- TRAV21_F_Homsap ------------------------AAACAGG..GTG..G--------...ATTCC----TGCAG.TC..AGTGTC--- TRAV21_F_Oviari ------------------------AAACAGG.CGTG.GT--------...AGTCC----TGAAG.TC..AG.GTG--- TRAV36_DV7_F_Homsap ------------------------GAA.AC...GTGGTA--------..AAG.CC----TCTA..TC...TTGTC--- TRAV36_F_Oviari ------------------------GA..AC..CGTG.TG--------...AG.CC----CTC...TC..ATTGTC--- TRAV39_F_Homsap ------------------------GAGCTG..AGTGGAA--------..AAA.CC----TCTG.T.C..AG.ATG--- TRAV39_P_Turtru --------------------------G.TG..AGTGGAG--------..AAGGCC----TCCA...C..AG.ATC--- TRAV39_ORF_Oviari ---------------------GCAGA.CTG..AGTGGAG--------..AAG.CC----TCCA.T.C..AT.ATC--- TRAV24_F_Homsap ------------------------A.ACTG..CGTGGAA--------..AAGTCC----TCAG..AC..C.TGTT--- TRAV7_F_Homsap ------------------------GAAAACC..GTGGAG--------..CAG.CC----TCAT.TTC...GAC.C--- TRAV20_F_Homsap ------------------------GAA.ACC..GTG..G--------...AGTCC----CGAGG..C..AGACTC--- TRAV20_1_F_Turtru ------------------------GAA.AC...GTGGAG--------...AGTCC----TCAGA..C..A.AATC--- TRAV20_1D_F_Turtru ------------------------GAA.AC...GTGGAG--------...AGTCC----TCAGA..C..A.AATC--- TRAV4_F_Homsap ---TATGAAGGACAAGAAGTGAACATAACCTGTAGCCACAACAACATTGCTACAA-ATGATTATATCACGTGGTACCA TRAV4_F_Oviari TCA........................C......A.....C..CA..A....T..-G...A......TTC.....T.G TRAV44S2_F_Oviari ---GC.......G.G..T..A...C.TC.T....A....TCT.C...C.A.G..T-TG..C.....ACAT.....T.G TRAV26_1_F_Homsap ---GC.......AG..CT.CA...C.GC.T....AT...TCT.C...CAG.GG..-....G...G.GTAT.....T.G TRAV26S1_F_Oviari ---AC.....A.G..CCT...C..T.GC......AT...TC..CA..CAG.GG.T-C...G..CG.ATAT.....T.G TRAV2_F_Homsap ---.CA..G...GCT.TG...G.A..CTT.....AT...TCTGTGTCCAA.G.TT-.CA.---CT..TTC.......T TRAV2_ORF_Oviari ---.TG..G...GCT.TG.CAG.A..TT......AT...TCT.TATCCAA.G----..T..GGCT..TTC......TT TRAV40_F_Homsap ---.CG..G...GC.TCT....CT..G.A...C.CAT...CATC..CG.GGTACC-C.AC---CC.TTTC.....TGT TRAV40_P_Turtru ---.CA......GCCTTGC...C...G.A...C.CAT...CATG..CA.GGTACC-C.AC---.C.TTTC.....TGT TRAV9_1_F_Homsap ---.C......GG.TTCCC...TTG.G.A...CTC.T.TG.A.C..CACAGTACC-C.TC---CC.TTTT.....TGT TRAV9_F_Turtru ---CCA.....GGCT.CCT...C.....AT..C.CTT.TTCAGC..C..GGTACC-CCAC---..CTTTC.....TGT TRAV9S2_F_Oviari ---.CA.....GACTTCT....CT....A...C.CTT.TTCAGC.TC..GGTACC-C..C---.C.TTTC.....TGT TRAV45_F_Turtru ---.CA..G..GGC.CCTAG..C.C.GCA...C.CTT..C.G.C.TC..A.C..G-G.CCC...C.TTTC......GT TRAV45S2_F_Oviari ---.CA..G..GGCTCTCA...C.C.G.A...C.CTT..C.G.CAGC..G.CTT.-C.CCC...C.TTAC......GT TRAV18_F_Homsap ---CC...GA.GGC..CTC...CAT...A...C.CTT.TC.GTC..GCTA.T...-C.TT---.C.ATTC.....TGT TRAV18S1_F_Oviari ---CC...GATGGC.TCTC...CTC.G.AG....CTT.TC.GTC..GCTA.T..G-T.TC---.C.TTTC.....TGT TRAV3_F_Homsap ---GC......GA.TCCTC...CTG.G.AA..C.C.T.TTCAGT.TC..GA.ACC-C.T.---.C.TTTT.....TGT TRAV3_F_Oviari ---GCG.....GG.TCC.....CTG.G.AG..C.C.T.TTCAGTTTCG.GG.GCC-C.T.---.C.TT.T.....TGT TRAV16_F_Homsap ---.T.A....GGCCCC....G.GC.G.AG..C.A.T.TTC.T.TTC..GG.GTC-C...---AC..TTC.....TGT TRAV16_F_Turtru ---.T......GTCCCC....C.GG.G.AG..C.A.T..TCAT.TTC..GG.GTC-C..T---GC..TTC.....TGT TRAV16_F_Oviari ---.C......GG.CCCC...C.GG.G.AG..C...T.TTCGT.TTC..GG.GTC-CC.T---GC..TTC......GT TRAV42S1_ORF_Oviari ---.C....A..TCCCGTC..G.GC.C.GG..C.A.T..TCATCTCC..T.T..C-TGT.---.C..TTC......AT TRAV42_1_F_Turtru ---.C.......GCCCGTC..G.GC.G.GG..C...T..TCATCTTC.T..T.GC-CCTT---.C..TTC......AT TRAV42_1D_F_Turtru ---.C.......GCCCGTC..G.GC.G.GG..C.A.T..TCATCTTC.T..T.GC-CCTC---.C..TTC......GT TRAV8_1_F_Homsap ---.C.....C.GCCTC.C..G.GT.GGGA..C.A.T.TTC.T.TGG..GA..TG-T.A.---.C..TTC.....TGT TRAV8_P_Oviari ---.C.......ACCTC.T..G.GC.G.AG....A.T.TTC.T..GG...A..TC-CCT.---.C.ATTC......GT TRAV1_1_F_Homsap ---GTG......GCCATT..CC.G....A...C.CGT..C.G.CATC..GGTTTT-...G---GC.GT.C........ TRAV1_F_Oviari ------......GCCTCT.CCC.GG.C.A...C.C.T..C.G.CATC..GGTTC.-...G---AC.GTTC........ TRAV31_P_Homsap ---C.G..G..TG.GACC.....AC.GGA....GCAT....A.CT.A.AT.GT.T-..T.CATAT.GTAT......A. TRAV33_P_Homsap ---C.GA.....GT..CT....C.T.GGA...C.TGTTTG.A.C..GATAG.ATT-CGT.CAC.T.ATAC......A. TRAV38_1_F_Homsap ---C.G..G.C.G.GACT....C.C.G.GT..C.CAT.TG...C..G..AG.AT.-..T.....T.GTTC......A. TRAV38_F_Oviari ---C.G..G.C.G.CACG....C.C.GGA...C.CAT.T.C..C..G..AG.GTG-..TG....T.GTTC......A. TRAV38_1_F_Turtru ---C.A..G.C.G.CAC.....C.C.GGA.....CGT.T.G..CT.G..AC.GT.-..T.....T.GTT.......A. TRAV38_2_P_Turtru ---C.A..G.C.G.CAC.....C.C..GA.....CGT.T.G..CT.G..AC.GT.-..T.....T.GTT.......A. TRAV14_DV4_F_Homsap ---C.G...AAGG.G.CT....CTC.GGA...C.CAT.TG...C..G..A.C...-G.T..GG.C.ATTC......A. TRAV14_TRDV4_F_Turtru ---C.G..GAAGG.G.TT....C.C.GGAT..C.TAT.TG...CA.A..AGTTC.-C.T..AG.C.ATAC......A. TRAV14S2_F_Oviari ---C.G..GAA.G..A.T....C.C.GGAT....CAT.TG...T..G.AT.....-C.T..AG.C.ATTC......A. TRAV19_F_Homsap ---GTG..GAAGG.G..T....C.T.GGA....GTGT.TG.A.C.CG..A...T.-C.T....CT.ATTC......A. TRAV19_P_Turtru ---------------------.C.T.GGAT...GTGT.TG.AGCT.G.AG.TAC.-G.T.....T.ATTC......A. TRAV11_F_Homsap ---C.G..G...ATGC.T.CCGTTC.T.AT....CTT.TC.GG.G.GAA.ACTCT-TCA.---.T..CAC....T..G TRAV15_P_Homsap ---CGG..G...ATGC.CAAC.TTC.T.AT..C.CTT.TG.GG.G.GAA.GTTCTCT.A.---CT..TAC....T.TG TRAV12_1_F_Homsap ---CCA..G...GCCACT..CGCTT.C.A.....CTT...G.....G....T.TC-.GTC---.T..TTC......AG TRAV12_F_Oviari ---CCA..G...GTCATC.CCTCTC.CGG...C.CTT.TTCTG...G.TA.T.TC-.GT.---CT....A......AG TRAV29_DV5_F_Homsap ---C.G......AG.ATTTCT.TTC.G.A....GA.T.T.CT....GCATGTTTG-..T.---.T..CTA......A. TRAV29S1_F_Oviari ---ACA......GGGATTTCT.TTC.G.A....GA.T.TG.T..T.C.ATACTTG-..T.---.T..CAA......AG TRAV23_DV6_F_Homsap ---C.GA.....GGGATTTCA.TT....A....GCTT.TG.G....C...GTTTG-.CT.---CT.TC.A........ TRAV23S1_P_Oviari ---C.G......G.GATTTCC.TTC.G.A.....ATT.TG.G....G.TTGTTTG-.CT.---CT..G..C.....TG TRAV32_P_Homsap ---..G..GA..G..ATG.CCGTT..T.ATGAC..TT.T.CAG.TGGA...TTG.-..T.---.T..TGT......A. TRAV13_1_F_Homsap ---C.G..G...G.CAGC.CTGTT..C.AG....CTT.TTCAG...G...CT...-.CT.---CT..C.T.....TA. TRAV13_F_Oviari ---C.G.....CA.CAGCTCTGTT..C.....C.CTT.T.CA..TGG.TACT..G-.GT.---.T..C.T.....TA. TRAV5_F_Homsap ---CGA..G...G.CAGCTCCGTT....A...C.CTT...CAG...GCT.CT.C.-CCT.---CT.ATAC.....TA. TRAV5_F_Oviari ---C.A..G...G.CA.CTGTGT...C.A...C.CTT...CAG...G...CT.CG-C.T.---CT.TGTT......A. TRAV10_F_Homsap ---CTG..G...A.GA.CTGC.CTC.TCAA..C.ATT.T.CAGTG.GCC.CTTC.-GCA.---CT.A.G......TA. TRAV10_F_Oviari ---CTG..G...G.GA.TTGC.CAT.TCAA..C.ATT.T.CAGTG.GCC.CTTT.-.CAC---CC.A.G.......AC TRAV34_F_Homsap ---C.A..G...A.GA.TC.C.C.....A...C.CGTCATCA---.AGA.GTT.T-...G---CT.ATAC.....TA. TRAV30_F_Homsap ---CGA.....GG....T.CTGT...C.A...C..TTC.TC.---.AG...TT.T-..TC---.G.ACAC......AG TRAV25_F_Homsap ---C.A......G.G..CT.C.C..CGTA...C.ATTC.TCA---.C.A..TT..-GCA.---...ACA......TA. TRAV25S2_F_Oviari ---C.A......G.GA.CT.C.CT.C.TA...C.ATTT.TCG.G..CATT.T----.CA.---CT.ACA......TA. TRAV35_F_Homsap ---C.G......G....T..CTC...G.A...C.CTTCTTCA---.GCATATTT.-.CAC---CTGGCTA......A. TRAV35_P_Oviari ---C.G..G...G.G..CC.CTC...G.A...C.ATTC.TCA---.GCA.ATT..-.CCT---CT.GCT.......A. TRAV27_F_Homsap ---C.A..G...G..A.TC.C.CTG.GTA...C.A.TC.TCA---.G..T.TTTT-CCAG---CT.ACAA......AG TRAV27_F_Oviari ---C.A..G...GG.A.T..C.C.C.GTA...C.A.TC.TCA.G..CCTTC.----CCTT---CT.TCA.......AG TRAV41_P_Turtru ---CTG......G.CTTT..C.CA..C.A...C...T..TCA---GAA.AA.TG.-CCAC---.T.ACA.....T... TRAV41_F_Oviari ---C.G......G.CCTCA.C.CA..C.A.....ATT..TTA---GAA.GA.TG.-CCAC---CT.ACA.....TG.. TRAV41_F_Homsap ---C.G......G..TTTA.C.CA..C.A...C..TT..TCGGTAGGAATA.----G..C---CT.ACAC...CTG.. TRAV22_F_Homsap ---C.G..G...GCCA.TTCC.CGC.GCGG..C.ATTTTTCT---GACT..GTG.-.CA.---.T.GCA.....TT.. TRAV22S2_F_Oviari ---C.G..G...GCCAGCTCT.CAC.GTGG....ATTT.TC..C.T.G..AG----.CAC---.G.GCG......T.T TRAV43S1_F_Oviari ---C.G..G...GCCA.CTCT.CTC.GTGG..C.ATTTTTCT---GACA.AGTG.-GCAG---.G.GCA.....T... TRAV28_P_Homsap ---C.A..G...AG.A.TTCATT.C.GGTG..C..TTGTTCT---...TAC.TG.-TCCG---.G.GCA.....TT.. TRAV28S1_F_Oviari ---C.A..G..CAG.A.TTCTTCTC.G.TA..C.ATT.TTCT.T.TCCATA.G..----G---CG.GCA.....T... TRAV17_F_Homsap ---C.G..G..TG..A.T.CC.C...G.A...C..TT....A---.C.AG..T..-.CA.---.T.ACA......TAG TRAV17_F_Turtru ---C.C..G..TG..A.T.CC.C...G.A...C..TT.T..A---.C.....T.G-.CAC---CT.ACAT......AG TRAV17_F_Oviari ---C.G..G..TG..A.TA.C.C...G.A...C...T.T..A.GT...A...T..-C..C---CT.ACA.......AG TRAV6_F_Homsap ---C.G..G..TA..ACG.CC.C.C.G.....C.A.T.T.CA...TA.T.CC..G-CAT.---CT.ACA........G TRAV6_P_Oviari ---C.G..G..TG..A.G.CC.CTG.G.......A.TGA.TG..TTA.C.CC..G-TATC---CTGACA.......TG TRAV37_P_Homsap ---A.G.....TG.CAGC..C.CAC.G.A...C..TT...GAG...GCC..T..G-..T----.C.TCA.....T.AG TRAV37_F_Turtru ---A.G.....CG.GAGCT.C.CAC.G.A...C..TT...CAG...GA...GTTG-..TT---CT..CA.....TTAC TRAV37_P_Oviari ---A.G.....CG.GA.CT.C.CAC.G.A...C..TT....AG.TGGA...GATG-..TT---CT..CA.....TTAG TRAV21_F_Homsap ---CCA......G..A.CT..GTTC.C.A...C..TTT..CTG.T.GC....TTT-.CA.---CC..CA.....TTAG TRAV21_F_Oviari ---AGA..G...G.CAGCT..GTTC.C.A...C..TT...C.G...GC...CTGT-.CTT---CC.TCA.....T.AG TRAV36_DV7_F_Homsap ---C.C..G...G.CACC..A.CTC.C.AT..C..TT.TG.AGTG.C.AACTTTC-GAAG---CC.ACTA......A. TRAV36_F_Oviari ---CT...G...AGCA.T.CA.CTC.C.GT..C..TT....AGTG.C.AACTTTC-.AAG---.C.GCAT.....TA. TRAV39_F_Homsap ---C.G..G...A..A.CTAT.C...CTA...C.ATT.TTCA.C..C.---T..G-.CAG---AC.GTAT......AG TRAV39_P_Turtru ---C.G..G...G...CCAGT.C...CTA...C.AT..TTCA.T..C....T.CG-.CAG---AC.GCAC......TG TRAV39_ORF_Oviari ---CGG..GC.G....CT.GA.---.C.A...CGAT..TTCAGT..C.A.CT.GG-.CAC---AT.GCTC......AG TRAV24_F_Homsap ---C.G..G...G.CAGCACC..TT.C.....C...TT.CCTTC..GCAA.TTTT-...C---CT.ACAC......AG TRAV7_F_Homsap ---C.GC.G...G.C.TT.CCTC...G.G...C.CGT..TCTGT..G.CG.TTT.-.CA.---.T.GCA.......AG TRAV20_F_Homsap ---C.G..G...G.GAGTAGC.GTC.T.A...C..TT...CAGT..GC.G.TT..-GA.G---GC.GTTC.....TAG TRAV20_1_F_Turtru ---C.G..G...G.CAGTC.C.T.C.C.A...C...T...C.GT..GCAA.TTT.-.CAG---GC.GCT......TAG TRAV20_1D_F_Turtru ---C.G..G...G.CAGTC.C.T.C.C.A...C...T...CGGT..GCAA.TTTT-.C.G---GC.ACT......TAG TRAV4_F_Homsap ACAGTT-------TCCCAGCCAAGGACCACGATTTATTATTCAAGGATACAAGACAAAAGT---------TACAAACG TRAV4_F_Oviari ......-------C....A...G.......A....G.C...........T.C..----------------C.ACCGT. TRAV44S2_F_Oviari G..AAC-------.....AT..GA.T....AG.A.G.C.....T..C.T.CGAGAC.C...---------G.AC.G.A TRAV26_1_F_Homsap ....A.-------..A.TC...G..G....AG.A...C.....T..TCTA..A.AC..T.A---------A..C..T. TRAV26S1_F_Oviari ....A.-------....C....G..T...GA..ACT.G.....C..TCTG..C.AC..T..---------G......A TRAV2_F_Homsap T..C..-------C..GG.ATGT.C....A..C.CC..G..------------.A.GGCTCAAAGCCTTC.CAGC.G. TRAV2_ORF_Oviari T..C..-------C..AG.ATTT.C....A..C.CC.C...------------GAGGGTT.AAGGCCTTC.CA.C.G. TRAV40_F_Homsap GG.A.A-------C......A..CCT.TG.AGC..C.------------TC...G.G.GACAATGGA---A.AC.G.A TRAV40_P_Turtru C..A.A-------C.T....A...TCTGCA.T..CT.C.-------------.GA.G.GACAATGAA---A.AC.G.A TRAV9_1_F_Homsap C..A.A-------...TG.AG....T....AGC.CCACC.GA...CCATG...G.C..T.ACAAGGG---A.GG...A TRAV9_F_Turtru T..A.A-------...TG.AG....T....AGG.CC..C.GA...CCATG...GAC..T.AGAAGAG---A..C..TA TRAV9S2_F_Oviari C....A-------...TG.AG....T....AGC.CC.CC.GA...CCACG...G.CGGC.ACAAGGG---A..C...A TRAV45_F_Turtru C....A-------..T..A.A...CT..G.A.C.CC.CC.GA.G..C.CG...G....CCAGAGGGC---AGAGC.TC TRAV45S2_F_Oviari C...CA-------..T....A...CT..T...C.CC.CC.GA.G..C.CGG...G.G.CCCAAAGCC---A.AG.GT. TRAV18_F_Homsap C....A-------..TA.A.A...AG..TGAGC.CC.CC.GA..A---GTTCAGA...CCAGGAGAC---GGAC.G.A TRAV18S1_F_Oviari C....A-------C.AA.A.A...AG.TTGAGC.GC.CC.AA..A.C.TATTAGG...CCAGAAGGT---G..C.G.A TRAV3_F_Homsap T..A.A-------C....A..G...C.TC.AG..CC..C.GA..TACAT..CAGGGG.TAACCTGGTTAAAGGC.G.T TRAV3_F_Oviari C..ACA-------..G..AT.....T.TC.AG..CC..C.GA..TACAT..CAGGGG.CCCTTTGGTTAAAGGC...T TRAV16_F_Homsap C....A-------CT....A...C.C.TC.AG..AC.CT.GAG.CACAT.TCT.G.G.------------G.GC.T.A TRAV16_F_Turtru ...C.A-------C....AA...CAC.TC.AG..AC.CC.GAG.CACAC.TC..G.G.------------G.GT.T.A TRAV16_F_Oviari C....A-------C.....A..GCAC.TC.AG..AC.CC.GA..CACAC.TCA.A.G.------------G.GC.T.C TRAV42S1_ORF_Oviari G....A-------C....A........TC.AGC..C.CC.GA.GTACATATCTGG.G...GCCTTGTTTCAGGC.T.A TRAV42_1_F_Turtru .....A-------C....AT.......TC.AGC..C.CC.GA.GTACACATCTGG...CAGCCTTGTCTCAGGT.T.A TRAV42_1D_F_Turtru G....A-------C...TAT.......TC.AGC..C.CC.GA.GTACACATCTGG...CAGCCTTGTCTCAGGT.T.A TRAV8_1_F_Homsap C....A-------C..TG.T...CAC.TT.AGC..C.CC.CA.GTAC.TTTCAGGGG.TCCACTGGTTAAAGGC.T.A TRAV8_P_Oviari C....A-------C..TG.G...A....C.AGC.GC.CC.CA.GTAC.TTTCAGGG..CACCATGGTTCAAGGC.TTA TRAV1_1_F_Homsap G..ACA-------.GATG..GG..C...CAC....C..TC.T.CAATGCTCT.GATGGTT.GGAGGA------G.CA. TRAV1_F_Oviari G..ACA-------.GATG.TGG..C...TGTG...C.CTC.T.CAATGTTTT.GATGGTT.GGA------G..G.GA. TRAV31_P_Homsap .AG..C-------.....ATGGGAAGATTATT..CC.C...T.TCAGC.A.CAGATGC..AAACCAATGCG...C.G. TRAV33_P_Homsap G..ACAAGCAACC......TG...AGATGGTT..CC.......TCAGGGTT.TT.T..------------GT....T. TRAV38_1_F_Homsap G...CC-------.......AGGCAGATGATTC.CG......GCCA.G.AGCTTAT..GCAACAGAATGCA..GG.GA TRAV38_F_Oviari ....CC-------.......GGG.AGATGGTT..C........CCA...TGCTTATG..CAACAGAATTCA..C.... TRAV38_1_F_Turtru ....CC-------.......GGG.AGATGATT..C......GGCCA.G.AGCTTAT..GCAACAGAATGCA..C...A TRAV38_2_P_Turtru ..G.CC-------.......GGG.AGATGATT..C......GGCCA.G.AGCTTAT..GCAACAGAATGCA..C...A TRAV14_DV4_F_Homsap G...CC-------CAG...TGGG.A.ATGATT...C.....T.TCAGGGGTCTTATG.CCAGCAAAATGCA...G.A. TRAV14_TRDV4_F_Turtru G...CC-------CAG...TGGG.CGATGATTC.CC......GTCAGG..TCTTAT..CCAGCAAAATGCA...G.A. TRAV14S2_F_Oviari G..ACC-------CAG...TGGG.TGATGACC..CC.C....GCCAGG..TCTT.T..CAAGCCAAATGCC...G.A. TRAV19_F_Homsap G..ACC-------A..A..TGG..A.TTGGTT..CC......GTC.GA..TCTTTTG.T.AGCAAAATGAA.T..GT. TRAV19_P_Turtru ...AAC-------A..A..TGGG.A.ATGATT..CC.......TCAGG.GTCTTAC..T.A-GTGAATACA...G.G. TRAV11_F_Homsap G...GA-------...GG.GAG.A...TTGTG.C.T.G.CCTT.ATTC.ATCA.GCC.GAAGGAGCA---GGG.G..A TRAV15_P_Homsap G...GG-------..T-G.AA......TTGTG.C.T.G.CCTT.ATTC.ATCA.GCC.GA.GGAGGA---GGG.G..A TRAV12_1_F_Homsap ....GA-------.TG...GA...A...TAAG..GC.G..GTCC.T....TCC.GTGGTAATGAAGA---------T. TRAV12_F_Oviari .....A-------C..TG.GA.......TGAG...C.GC.G..G.TG..TGCCGAC....ACAAAGA------.G.A. TRAV29_DV5_F_Homsap .A.A.A-------C..TGCTG....T..TAC...CC.G..ATCTAT.AGTTCC.TT..G.ATAAAAA---.GA.G.T. TRAV29S1_F_Oviari .A.A.A-------C..AGCGA..A.T..CAC..CCT.G..ATC.AT.AGTTCCGTTTTG.AAAAAAA---.GAGG.T. TRAV23_DV6_F_Homsap ...A..-------C..TG.GA....C..TGC...AT.G..AGCCAT.CGTCCAGATGTGAGTGAAAA---G.A.G.A. TRAV23S1_P_Oviari ...A.A-------...TG.TA....C..TGC...CT.G..AGCCAA..GTTCAGTTGTGAATGAAAT---GGA.G.T. TRAV32_P_Homsap GA..AA--------AA.G.GG....C..TAATA.CT.A..GG.GATTC.TTCA.ATGTG.ATAGAAA---ACAGG..A TRAV13_1_F_Homsap G..AGA-------A.TTG.AA.......T.AGC.......AG.CATTCGTTCA.ATGTG.GCGAAAA---G.A.G..C TRAV13_F_Oviari G..AGA-------A..TG.GA....T..C.AGC.CC....AGCTATTCGTTCA.AT..G.ACAAAGA---GGA.G..C TRAV5_F_Homsap G..AGA-------A..TG.AGC...T.TC.AG..GC.G.CGT.TATT.TTTCA.AT.TG.ACATGAA---ACA.G..C TRAV5_F_Oviari ...AGA-------A..TG.AA....T.TG.AG..GC....A..TACTCTTTCA.ATGTG.ATAAGAA---AGA.GGAC TRAV10_F_Homsap G..AGA-------.A.TG.GAG...T..TGTT.CCC.G.CAATCATGACTTTC.GTG.GAACACAAA---GT.G.... TRAV10_F_Oviari ....GA-------CA.TG.GAG...T.TTGTT.CCC.G..AACCATGACTT.C.GTG.CAACAAAAA---GT....T. TRAV34_F_Homsap G..AAA-------GTATG.TG....T.TTATC..CT.G..GATGCT.C.G..AGGTGGG.AAGAGAA---A.GTC.T. TRAV30_F_Homsap G...AA-------G.ATG.TG...C...CGTC..CC.G..GAT.TT.CTG...GGTGG..AACAGAA---GGGTC.T. TRAV25_F_Homsap G..AAG-------G..TG.TGG.CAT..CGTT...T.G..A..GTT.GTG....GTGG..AAGTGAA---G.AGC.GA TRAV25S2_F_Oviari G...AG-------G..TG.GGGCA.T..TGTCC.CC.G..GAT.TT.GCT...GGTGG..AAGTAAA---G..GC.GC TRAV35_F_Homsap G...GA-------A..TG.GG....T..TGTCC.CT.G..AGCCTT...T...G.TGGT.AATTGAC---CT....T. TRAV35_P_Oviari G...GA-------.G.TG.AG....C.TGATCC.AC.A..AA..TT.CTT...GGTGGT.AGTTGGC---C.G...T. TRAV27_F_Homsap ....GA-------G..TG.GG....T..TGTCC.CC.GG.GAC..T.GTT.C.GGTGG..AAGTGAA---G.AGCTGA TRAV27_F_Oviari ....AA-------G...GAGG....G..TGTCC.CT.GG.GAC.TT.ACT..AC......AAATGAA---GGAGC.GA TRAV41_P_Turtru ....AA-------...TG.AGG...TGTTGTC.CCT.GT..AT.CTGAG.TT------..AGATGAA---G.AG..A. TRAV41_F_Oviari ....AA-------...TG.AGG.A.CATCATC.CCT.GC..ACTCTGAG.CT------..AGATGAA---G.AG..A. TRAV41_F_Homsap ....CA-------...AG.AGG...CATTGTT.CCT.GT..ATGCTGAG.TCAGGG..GAA---------G.AGC.T. TRAV22_F_Homsap T..AAA-------C..TT.GGG.CAG.TCATCAACC.GT..T.CATTCC.TC------..GGACAAA---ACAG..T. TRAV22S2_F_Oviari T...AA-------G..TG.GGGCC.C.TCATCCACC.C...T.CATTCCTTCAGG..C.AG---------GCA.G.A. TRAV43S1_F_Oviari G...AA-------...TGAAGGCA.CATCATCAG.C.GT..TTCAT.GCTTC------..GGACAAA---GCAG..T. TRAV28_P_Homsap T..AAA-------G..TG.AGG.CCC.TCATG.CCT.AT..A.CATTA.TTC------..GAATACA---GCA...AA TRAV28S1_F_Oviari ...AAA-------...TGATGG.C.C.TCATC.CCT.GT..T.CAT.GCTTCAGG..TGCA---------GCAG..A. TRAV17_F_Homsap ...AAA-------.T.AG.TAG...C.TTGTCCACC.A...TT.AT.CGTTCA.ATG..AGAGAGAA---ACAC.GT. TRAV17_F_Turtru ....GA-------.T.A..GAG...CTTTGCCCACC.G...TT.AT.CGTTCA.ATG.GAGAGAGAA---GCTT.GT. TRAV17_F_Oviari ....GA-------.T.A..G.G...CTTTGTTCA.C.G...TT.ATGCGTTCA.ATG.GAGACAGAA---ACAC.GT. TRAV6_F_Homsap ...AGA-------...AG.AAG...C..TGTT..CT.GC.A.TCAT.CGTG.A.ATG.GAAAGAAAA---A.GG..A. TRAV6_P_Oviari ...AGA-------.TTGG.GAG...CTTGGTCA.CT.G..C.T.AT.C.TG.A.ATG.GTGTGAGAA--------..A TRAV37_P_Homsap G...GA-------...TGAGG....C.TCATT.CCC.G..A...ATGCTATCA..TGTGAGAGAGAA---G.TC.GT. TRAV37_F_Turtru G...GA-------......GG....C.TC.AC.CCC.G..A...TTG.TTTCA..TG.GAAAGAGAA---G.TC.GT. TRAV37_P_Oviari G...GA-------......GG....CATC.AC..CC.GG.G..GTTG.TTGTA.ACG.G.AAGAGAA---A.TC.GG. TRAV21_F_Homsap G...GA-------C..TG.GA....T.TCAC..C.C.GT.G.TTATTC.GTCA.GTC.GAGAGAGCA---A....GT. TRAV21_F_Oviari G...GA-------...TG.GA....G.TCAT..C.C.GC.GTC.ATTC.GGCA.ATC.GAAAGAGCA---A....GT. TRAV36_DV7_F_Homsap G...GA----------A.AGA...CT..CAC....C.AT..ATGCT.ACTTCA.GTGG.A.TGAAAA---G.AGTCA. TRAV36_F_Oviari G...GA----------AGAGA...T...CAC....C.AT..GTGTT.ATTTCA..TGGGA.TGAGAA---G..GTCA. TRAV39_F_Homsap G...GA-------...TG.GA..A.T.TGGA..C.C.GT..GTGTTGCTATCA.ATGG..CAGTGAA---GCAGG.G. TRAV39_P_Turtru ....GA-------..TGG.GA.GA.C.TGGA..C.C.GT.CTT.TTG.TGTCA.ATGGG..AGTGAA---GCAG..G. TRAV39_ORF_Oviari ....GA-------..AGG.GA.GA.C.TGGA..C.C.GT..TT.TTGATGTCA.ATGG..CAGTGAG---G.AG..G. TRAV24_F_Homsap .TG.GA-------AA.TGCAA..A.C..CGAGGCCT.GT..GT.ATGACTTTA.ATGGG.ATGAAAA---G.AG..A. TRAV7_F_Homsap G..AAA-------.A.AG.GATG..T..CAA.CACC.AT.ATCCATG..TTCAG.TGG.TATGAGAA---GCAG..A. TRAV20_F_Homsap G..AGA-------...TG.GA....C..TGA...CC.CT.CACCCTG..TTCAG.TGGG.AAGAAAA---GGAG..A. TRAV20_1_F_Turtru ....GA-------...TG.GA.G.....TGA.C..C.CT.CGCTCTT...TCAGTTGGG.ACGAAAA---GCAG.... TRAV20_1D_F_Turtru ....GA-------...TG.GA.G.....CGA.C..C.CT.CGCTCTT...TCAGTTGGG.ACGAAAA---GCAG..A. TRAV4_F_Homsap AAGTGGCCTCCCTGTTTATCCCTGC-------CGACAGAAAGTCCAGCACTCTGAGCCTGCCCCGGGTTTCCCTGAGC TRAV4_F_Oviari G.AAATGAAGTGGCA.CTCTGT.AATTCCTCCT.....G....T......C................C.......G.A TRAV44S2_F_Oviari GCA...G...T..AAAC..AG..T.-------A.................CT..GT....T...A...CA.......A TRAV26_1_F_Homsap ..A.......T...A.C...A.A.A-------A.................CT...T........AC.C.A.G.....A TRAV26S1_F_Oviari GGA.......T...AGC...G.CAA-------A.................CT..GT........A...CA.......A TRAV2_F_Homsap G.CGATA.AA.A..ACCTATGAACG-------------GTTC..TTCAT.G...CT.A.C.T..A...GCGGGA.GCA TRAV2_ORF_Oviari G.CGCTA.AA.A..ACATATGAGAG-------------GTTC..TTCAT.A...CT.A.C.T..A...GCAGAC.GCA TRAV40_F_Homsap ..AACTT.GGAGGCGGA.ATAT.AA-------A....A...C...CC..T.G...AATATT.AG---.CCAGG.ATCA TRAV40_P_Turtru ..AACTTTGGAGCCAGA.A..T.AA-------A....A..GC...CCTG--T..T.AAATA.A-CCA.CCAGG.ATCA TRAV9_1_F_Homsap ...GTTTTGAAGCCA.GTA..G.AA-------A..A.CC.CT..TTT.CACT..GAGAAAGA.TCA...CAAGA.TCA TRAV9_F_Turtru ...ACTTTGAAGCCACATA..ACAA-------A..ATC...A...TT.CACT..GAGAAAG..TCA..CCAAGATTCA TRAV9S2_F_Oviari ...GTTTTGAAGCCACATATAA.A.-------A..A.CT.CC...TT.CACT..GAGAAAG..TCA..CCAAGA.TCA TRAV45_F_Turtru ...GTTTTCAGGCCAC.C.TGT.A.-------GAGTGAC.GC...TT.CAC...CAGAAAA..TCAA.GCAAGCATCA TRAV45S2_F_Oviari ...GTTTTCAGGCCAC.C.TGT.CA-------GAGTGAC.G....TT.CAC...CAGAAA.TGGCA..GCAAACATCA TRAV18_F_Homsap G..GTTTTCAGGCCAG.CCTATCAA-------GAGTGAC.GT...TT.CAC...GAGAA....TC...GCAG...TCG TRAV18S1_F_Oviari G..GCTTTGAAGCCAC.CATATCT.-------GAGTGAC.GC...TT.CAC...CAGAAAT..TCC..GAAAACATCA TRAV3_F_Homsap .T.GCTTTGAAGCTGAAT.TAACAA-------GAG.CA..CC...TT.CAC....AGAAA..ATCT.CCCTTG..... TRAV3_F_Oviari .T.GTTTTGAGGCTGAAT.TAAC.A-------GAG.CA..CC..TTT.CAC....AGAAA..ATCT...CT.GG...T TRAV16_F_Homsap ...GCTT.A.TGCTGACC.TAACAA-------A.G.GAG.CA..TTT.CAC....AGAAA..ATTT.C.CAAGA.GAA TRAV16_F_Turtru G..GTTT.A.GGCTGACC..AACAA-------G.GTGAGGCA...TT.CAC....AAAAA.TATCA.C.CAAGA.GAA TRAV16_F_Oviari .G.GTTT.A.TGCTGAGC..AGCCG-------G.CTGAGGCA...TT.CA.....AAAAA...TC.AC.CAGGA.GAA TRAV42S1_ORF_Oviari ...GTTTTAAGGCTGAAT.T---AT-------AA.TGA..CCA.TTT.CAC...GAGAAA..ATTA.CCCATTG...G TRAV42_1_F_Turtru ...GTTTTGAGGCTGAAT.TAGGAG-------GAGTGAG......TT.CAC.....GAAAA.ATCA.CCAATTG..AA TRAV42_1D_F_Turtru ...GTTTTGAGGCTGAAT.TAGGAG-------GAGTGAG......TT.CAC.....GAAAA.ATCA.CCCATTG..AA TRAV8_1_F_Homsap .G.GCTTTGAGGCTGAAT.TATAAA-------GAGT.A.TTC...TTT.A......GAAA...TCT..GCAGTG...T TRAV8_P_Oviari G..GCTT.GTGGCTGAAT.TAGGAG-------.AGTGATTTT...TT..AC.....GAAATT.TCA.CCCATTG...T TRAV1_1_F_Homsap GTCGTTTT..TTCA..CC.TAG.CG-------.TCTGAT.GT.ATG.TTAC..CCTT..A.AGGA.C.CCAGA...AA TRAV1_F_Oviari GTCATTTT..TTCA..CC.TAGACG-------.TCTGATGCACA...TTAC..CCTT...AAGGAAC.CCA.A...AA TRAV31_P_Homsap GTCAATAT..TG..AGCT...AGAA-------AACA.CT..AA.T.TTCAG..T.T.A.AT.ATCATCACAG.CAGAA TRAV33_P_Homsap C.AA.C---.TG..AACT.TGAAAA-------AA.G.A.....T..T..AC..C.C.A.CAATTCCT.AAAA..---- TRAV38_1_F_Homsap .TCGTTT...TG..AACT...AGAA-------A.CAGCC..A...TT..G...C.AGA.CT.AGACTCACAG...G.G TRAV38_F_Oviari .TCGCTA...TG..AACT...AGAA-------A..ATCC..AG.TTT..G...C..GA.CT.AGACTCCCAG...GAG TRAV38_1_F_Turtru GTCGCTA...TG..AACT...AGAA-------A..AGCC..A...TT.CG...C..GA.CT.AGACTCCCAG...GAG TRAV38_2_P_Turtru GTCACTA...TG..AACT...AGAA-------A..AGCC..A...TT.CA...C..TA.CT.AGACTCCCAG...GAG TRAV14_DV4_F_Homsap GTCGCTA...AT..AA.T...AGAA-------G.CA.....A...GC..AC..TGT.A.CT..GCTTCACAA...G.G TRAV14_TRDV4_F_Turtru GTCGCTA...A...AA.T...AGAA-------G.CA.AC..A....T..AA..TGC.A.CT.AGCTTCACAG...GAG TRAV14S2_F_Oviari GTCGCTA...AT..AA.T...AGAA-------G.CAG.C..A.T..T...A..T.C.A.CT.AGCTTCACAA...GAG TRAV19_F_Homsap GTCG.TAT..TTG.AACT...AGAA-------ATC..CC.GT...TT..ACT.C.C.A.CA.AGCCTCACAAG.CGTG TRAV19_P_Turtru GTCG.TAG.TTT..AACT...AGAA-------AACGGCC.GT....T..GC..T.C.A.CA.AGCCT.GCAG..TG.G TRAV11_F_Homsap ..TATTTTAAAGAAC.GC.TGGAAA-------A..A.A.TTT.AT..TGT.TG..ATA.CG.AGCCTC.CAT...G.A TRAV15_P_Homsap ..CATTTTAAAGAAGCGC.TGGAAA-------A..G.AGTTT.AT..TGT.T...ATA...TGGTCTC.CAT.CTG.A TRAV12_1_F_Homsap G.AG.TTTA.AGCACAGC..AA.AG-------A.C...CC...AT.TTT.C...CT.A.CAGAGACTCCAAG..C..T TRAV12_F_Oviari G.AAATTTA.AG..CAGTC.AA.AA-------AAC..AC...CGTGT.T.C...C.TA.CAGAGACTCCGAG.CC... TRAV29_DV5_F_Homsap G.AGATT.A.TG.C..CT.AAACAA-------AAGTGCC...CA.CT.T.....CA.A.TGTG.CCTCCCAG.CTG.A TRAV29S1_F_Oviari G.AG.TT.A.AG.C..CCATAACAG-------AAGTGCC..ACA.CT.T.C...CA.A.CT.AGCCTCCCAG.CTG.A TRAV23_DV6_F_Homsap G.AGATT.A.AA.C.CCT..AA.AA-------AAGTGCC...CAGTT.T.AT..CATA.CATGGATTCCCAG.CTG.A TRAV23S1_P_Oviari G.AGACT.A.AG.T..CC..AA.AA-------GAG.GCC..ACAGCT.T.AT..CA.G.CG.AACTTCC.AG.CTG.A TRAV32_P_Homsap G.AG.CT.A.TG.AC.GT.GAA.AA-------AA.TGCT..ACATGT.T.C...CATA.TA.AGCCACCCAA.CAG.A TRAV13_1_F_Homsap ..CGAATTG.TG.TACAT.GAACAA-------GACAGCC..ACATTT.T.C...CA.A.CA.AGA.ACCCAA.CTGAA TRAV13_F_Oviari .GAGACTGA.TG.T..AT.GAACAA-------GACAGCC..ACGTCT.T.C...CA.A.CG.AGCCAC.GAAGCTG.A TRAV5_F_Homsap ..AGACT.A.TG.TC.AT.GAA.AA-------AA.GGAT..ACATCTGT.....C..A.TG.AGACACCCAGACTG.G TRAV5_F_Oviari ...GACT.ATTG.T..AT.GAA.AA-------GA.G.AC..ACATCT.T.C....A.A.CA.AGCTACCCA..CCG.. TRAV10_F_Homsap G.AGATATA.AGCAAC.C.GGA...-------A....C....CAA...T.....CA.A.CA.AGCCTCCCAG..C... TRAV10_F_Oviari G.CG.TA.A.AGC.AC...GGA...-------AACTGCC...CA....TTC...CA...CA.AGC..CCCAG..C... TRAV34_F_Homsap ..AA.ATAA.TGCCAAGT.GGA..A-------GA.A.AGC..CAA..TT.C...CATA.CA.AGCCTCCCAG.CC... TRAV30_F_Homsap ..AAAATA..TGCT.CAT.TAA..A-------AA.A.AGC..CAA...T.C...TA...TA.GGCCTCCCAG..C..T TRAV25_F_Homsap ..AGACTGA.AT.TCAGT.TGGA.A-------A.CA.A....AA....T.C...CA.A.CA.AGCCACCCAGACT.CA TRAV25S2_F_Oviari .GAGACTGA.AG.TCGGT.TGGA.A-------GTC....C..CA....T.C...CA...CA.GGCCAC.CAG.CCTCA TRAV35_F_Homsap G.AGACTGA.TGCTCAGT.TGG.AT-------AAC.......GA....TTC....ATA.CT.AGCATCCATA.CT..T TRAV35_P_Oviari GGAAACTGA.TGCTCAGT.TGGA.G-------AACA......GA....TTA....A.AATT.AGCCT..GAA.CT.AA TRAV27_F_Homsap .GAGACTAA..T.TCAGT.TGG..A-------T.CA......GA...TT....CCA.A.CA.TGCA.CCCAG.CTG.T TRAV27_F_Oviari .GAGAATAAGGGCTGAGT.TGG..A-------A.CA......GAT...T.G..TCT.A.CA.TGCA.CCCAG.CTG.G TRAV41_P_Turtru G.AGA.TAAGTGCCACA...AACAG-------AA.AGA.CGTCA....T.C...CA.A.CT.AGCTTCACAG.CCC.A TRAV41_F_Oviari G.AGA.TAAGTGCCACA..AAACAG-------GAGGGA.CGT.A....T.C....A.A.CA.AGCCCCCCAG.CC.CA TRAV41_F_Homsap G.AGATTAATTGCCACA..AAACAT-------AC.GGA....CA....T.C...CA.A.CA.AGCCTCCCAT.CC..A TRAV22_F_Homsap G.AGATTAAG.GCCACG.CTGTC..-------TACGGA.CGC.A....TTAT..TA.A.TT..TCTTCCCAGACC.CA TRAV22S2_F_Oviari G.AGATTAAATGCCACGGCAGTCC.-------TA.AGA.CGCCG....T.A...CA.A.TT..TCTT.GCGGACC.CA TRAV43S1_F_Oviari ..AG.CTGAGTTCCACAC.GAA.T.-------TA.GGAGCG..AT..T..C..ACA.A.CA.AGCCTCCCAG...GAA TRAV28_P_Homsap G.AGACTAAAATCCGCAG..AAA..-------T..GGA.CTT.ATG..CAC..ATA.A.C--AGATTCCCAG.CTGAG TRAV28S1_F_Oviari G.AGACTGAAATCCACC...AACAG-------.A.GGAGCGT.A...TCAA..CTA.A.CAGAGACTCCCAG.CTG.G TRAV17_F_Homsap G.AGATTAAGAG.CACGC.TGACA.-------TTC..AG..AAG...TT.CT..TTGA.CA.GGCTTCCCGGGCAGCA TRAV17_F_Turtru G.AGACTGCGAG.CACGC.TGACAA-------.TC..TC..AGG...TT.C...TC.A.CA.GGCTTCCCAGGCTGCA TRAV17_F_Oviari G.AG.CTACA.T.CACGC.TGACAG-------.TC..TC..AAG....T.CA..TC.A.CA.GGCTTCCCAGGCTGAG TRAV6_F_Homsap ..AGACTGAAGG.CACCT.TGA.A.-------.AC.CTT..ACAG..TTTGT.TCATA.CA.AGCCTCCCAG.CTGCA TRAV6_P_Oviari G.AGACTGAGGGC.GCCTCTGACA.-------.AGGCTC.GACAG...T.CT.TCA.A.CA.AGCCTCCCAG.CTGCA TRAV37_P_Homsap G.AGATT.A.AGCCAGGC.TAAAAA-------A.GAGACC..CA..TTT.C...CA.A.A.AGGATTCCCAG..CCAT TRAV37_F_Turtru G.AGATT.A.AGCCAGGC.TAACAA-------AA.TGACC..CAATTTT.C...CA.G..AAGGATTCCCAG..C.A. TRAV37_P_Oviari G.AGATT.A.AGCCAAGC.TAACAA-------AA.TGACC..CAATTTT.....CATG..GAGGATTCCCAGT.CCA. TRAV21_F_Homsap G.AGACTTAATGCC.CGC.GGA.AA-------ATCATC.GGACGT..T...T.ATA.A.TG.AGCTTC.CAG.CTG.T TRAV21_F_Oviari G.AGAATTA.AG.C.CGT.GGA.AA-------ATCATC..GACA...TG..T.ATA.A.TG.AACTTC.CAG.AC..T TRAV36_DV7_F_Homsap G.AGACTAAGTAGCA.AT.AGA.AA-------GA.AGA.CTT.......TC....A.A.CA.AGCCACCCAGACCG.A TRAV36_F_Oviari G.AGATTAAAAGGCACAT.AGACAG-------AA.AGA.CTTCTT.....C...TA.A.CA.AGTCACCAAG.CCG.A TRAV39_F_Homsap G.CGATTAATGGCC.CAC.TGA.A.-------.A.AGCCCGTCT......C..CCA.A.CA.AGCT.CCGTG.ATGA. TRAV39_P_Turtru G.AAATTAA.AGCC.CCC.TGA.A.-------.A.AGCCCGTCG......C...CA.A.CA.AGCCTCCCAG.CTG.. TRAV39_ORF_Oviari G..GATTAA.AGCC.CCC.TGA.A.-------.A.AGCCCGTCG....C.C...CA.A.CA.AGCCTCCCAT.CTG.. TRAV24_F_Homsap G.CGAATAAGTGCCAC.C.TAA.A.-------.A.GGAGGGT.A....TA.T..TA.A.CAAAG.ATCCCAG.CTGAA TRAV7_F_Homsap G.AGACTAAATGCTACAT.A.TGAA-------GA.TG...G------..GCT..TA.A.TA.AGCC..GCAG.CTGAA TRAV20_F_Homsap ..AG.CTAAAAGCCACAT.AA.AAA-------GA.GGA..GC.TT------...CA.A.CA.AGCCCC.AAA.CTGAA TRAV20_1_F_Turtru ..AGACTAAAAGCCACCT.GTTAAA-------GA.GG...G------.T.....CA.A.CG.AGCCCC.AAA.CTGAA TRAV20_1D_F_Turtru ..AGACTAAAAGCCACCT.GTTAAA-------GA.GG...G------.T.....CA.A.CG.AGCCCC.AAA.CTGAA TRAV4_F_Homsap GACACTGCTGTGTACTACTGCCTCGTGG-GTGACA-------------------------------------- TRAV4_F_Oviari ...G.C...............A.....C-.A...G-------------------------------------- TRAV44S2_F_Oviari .....C..............TG..C..A-.A..GG-------------------------------------- TRAV26_1_F_Homsap .................T...A....CA-.A.T.G-------------------------------------- TRAV26S1_F_Oviari .....C...............A..C..A-.A....-------------------------------------- TRAV2_F_Homsap ..TG.......T........TGCT....A.GA----------------------------------------- TRAV2_ORF_Oviari ..TG.A.GG..T.....T..TGCT...AG..A----------------------------------------- TRAV40_F_Homsap ...T.A..C...........T..TC...-.A..---------------------------------------- TRAV40_P_Turtru ..--.A..CA..........T..TC..A-.A..---------------------------------------- TRAV9_1_F_Homsap ...T.C..........T...TGCTC..A-....---------------------------------------- TRAV9_F_Turtru ..TT.G..............TGCTC..A-....---------------------------------------- TRAV9S2_F_Oviari ...T.G..............TGCTC..A-....---------------------------------------- TRAV45_F_Turtru ...T.G..............TGCTC..A-..------------------------------------------ TRAV45S2_F_Oviari ...T.G..............TGCTC..A-....---------------------------------------- TRAV18_F_Homsap ...T....C............GCTC..A-.A..---------------------------------------- TRAV18S1_F_Oviari ...T.A........T......GCTC..A-......CAGTGAGAGAGGCTGCAAGGAGAGCTGAACACAAACCC TRAV3_F_Homsap ...T.C...T......T...TGCT...A-.A....-------------------------------------- TRAV3_F_Oviari ...T....C.......T...TGCT...A-.C..---------------------------------------- TRAV16_F_Homsap ...T.A..CA....T.....TGCTC.AA-...G---------------------------------------- TRAV16_F_Turtru ...T.A..G.....T.....TGCTC..A-.G..---------------------------------------- TRAV16_F_Oviari ...T.A........T.....TGCTC...-..A.---------------------------------------- TRAV42S1_ORF_Oviari ...T....CAA.....T...TGCTC...-A...---------------------------------------- TRAV42_1_F_Turtru ...TTG.GCAA.....T...TGCTC..A-....---------------------------------------- TRAV42_1D_F_Turtru ...T.G..CAA.....T...TGCTC..A-....---------------------------------------- TRAV8_1_F_Homsap .....A....A.....T...TGC....A-A..C---------------------------------------- TRAV8_P_Oviari ...T.A....A.....T...TGCAC..A-...C---------------------------------------- TRAV1_1_F_Homsap ...T....CTCT....T....GCT...A-.A..---------------------------------------- TRAV1_F_Oviari ...TT...CTCT...CT...TGCT...ATAGA----------------------------------------- TRAV31_P_Homsap ...-....AACA..T.T...TTGTC.CA-AA..GCC------------------------------------- TRAV33_P_Homsap ...T.A..CAA.....T...TGCTC.CA-.GA.TCC------------------------------------- TRAV38_1_F_Homsap ........GA....T.T...TGCTT.CA-TGA.GCA------------------------------------- TRAV38_F_Oviari ..TG....AAAA..T.T...TGCTTACA-...GTG-------------------------------------- TRAV38_1_F_Turtru ..TG....AAA...T.T....GCTTACA-...GTC-------------------------------------- TRAV38_2_P_Turtru ..TG....AA....T.T....ACTTACA-.G------------------------------------------ TRAV14_DV4_F_Homsap ...T.A..AA......T...TGCAA..A-.A..GGG------------------------------------- TRAV14_TRDV4_F_Turtru ...T....A.....T.T...TGCAC..A-....GCG------------------------------------- TRAV14S2_F_Oviari ...T....A.....T.T...TGCAC..A-....GCC------------------------------------- TRAV19_F_Homsap ...T.A..A..A....T...TGCTC..A-....GGC------------------------------------- TRAV19_P_Turtru ...T.A..A.....T.T...TGCTC..A-.A...CACA----------------------------------- TRAV11_F_Homsap ..TT.A..CACC....T...TGCTT..---------------------------------------------- TRAV15_P_Homsap ..TT.A.GCACC....T...TGCTT..A-.G------------------------------------------ TRAV12_1_F_Homsap ..TT.A..CACC...CT...TG.G...A-ACA----------------------------------------- TRAV12_F_Oviari ...T.A..CACC...CT...TGCA...A-.CA----------------------------------------- TRAV29_DV5_F_Homsap ...T....A.......T...TGCA.CAA-.C.----------------------------------------- TRAV29S1_F_Oviari ...T.A..CT.....CT....GCA.CCA-.CA----------------------------------------- TRAV23_DV6_F_Homsap ...T.A..CACC....T...TGCA.CAA-.CA----------------------------------------- TRAV23S1_P_Oviari ...TGA..CACC....T...TGCA.CAA-...----------------------------------------- TRAV32_P_Homsap ...T.ATTCC......T...TGCA...A-.AA----------------------------------------- TRAV13_1_F_Homsap ...T.G.....C....T...TGCA.CAA-..A----------------------------------------- TRAV13_F_Oviari ...T.G.....C....T...TGCA.CA.-..A----------------------------------------- TRAV5_F_Homsap ...T.A...A.C....T...TGCA.A.A-..A----------------------------------------- TRAV5_F_Oviari ...T.A..CACC....T...TGCT.CAA-.A.----------------------------------------- TRAV10_F_Homsap ..TT.A..CTCC...AT...TG.G...A-.C.----------------------------------------- TRAV10_F_Oviari ..TCTA..CT.C...AT...TG.G....-...----------------------------------------- TRAV34_F_Homsap C.TG.A.GCA.C...CT...TGGA.CA.-ACA----------------------------------------- TRAV30_F_Homsap T..T.A.GAACC....T....GG.ACA.-AGA----------------------------------------- TRAV25_F_Homsap ..TGTA.GAACC....T...TGCA.G.---------------------------------------------- TRAV25S2_F_Oviari ..TGTA.GAACT....T...TGC.AC.A--------------------------------------------- TRAV35_F_Homsap ..TGTA.GCA.C....T...TGCT.G.C-AG------------------------------------------ TRAV35_P_Oviari ..TGGA.GCACC....T...TGCT.GCA-.------------------------------------------- TRAV27_F_Homsap ..T..A.GCC.C...CT...TGC--A..-AG------------------------------------------ TRAV27_F_Oviari ..TG.G.GCACC...CTG..TGCA.G..--------------------------------------------- TRAV41_P_Turtru ........GACC....TT..TGCT..A.-AGA----------------------------------------- TRAV41_F_Oviari ...T....CA.C....T...TGCT....-AGA----------------------------------------- TRAV41_F_Homsap ...T....C..C...AT...TGCT..CA-.A------------------------------------------ TRAV22_F_Homsap ...T.A.GC..T..T.T...TGCT....-AGC----------------------------------------- TRAV22S2_F_Oviari ...T.G.GCACT....T...TGCT...C-.G------------------------------------------ TRAV43S1_F_Oviari ...G.A..CACC...CT...TGCG.C..-AG.----------------------------------------- TRAV28_P_Homsap ...T.A...A.T....T...TGCT....-.GA----------------------------------------- TRAV28S1_F_Oviari ...T.A..CACC....T...TGCT....-AGA----------------------------------------- TRAV17_F_Homsap .........TCT....T...TGCTAC..-AC.----------------------------------------- TRAV17_F_Turtru .........ACT...CT...TGCTAC..-A.A----------------------------------------- TRAV17_F_Oviari .........ACT....T...TGCTCCA.-ACA----------------------------------------- TRAV6_F_Homsap ...T.A...ACC...CT...TGCTC.A.-ACA----------------------------------------- TRAV6_P_Oviari T-.T.A...CA.C.GG..CCTGC.T.C---------------------------------------------- TRAV37_P_Homsap ...T.AA.CACA.T..T....GCA.CAA-.CA----------------------------------------- TRAV37_F_Turtru .....AA.CACC.T..TA..TGCAAC.A-...----------------------------------------- TRAV37_P_Oviari ..TG.AA.CAAC.T..TG..TGCAACA.-..A----------------------------------------- TRAV21_F_Homsap ...T.A..CACC...CT...TGCT...A-.G------------------------------------------ TRAV21_F_Oviari ...T.GA.CACC...CT...TGCT...A-.G------------------------------------------ TRAV36_DV7_F_Homsap ...T.G..CA.C...CT...TGCT....-AG.----------------------------------------- TRAV36_F_Oviari ...T.A..CACC...CT...TGCA....-AG.----------------------------------------- TRAV39_F_Homsap CT.T....CACC....T...TGC.....-ACA----------------------------------------- TRAV39_P_Turtru CT.T....CACC....T...TGC.....-A..----------------------------------------- TRAV39_ORF_Oviari CT.T....CACA....T...TGC.A...-A------------------------------------------- TRAV24_F_Homsap ...T.A..CACA...CT...TGC.T.TA--------------------------------------------- TRAV7_F_Homsap ..TT.A..CACC..T.T...TGCT..A.-A..----------------------------------------- TRAV20_F_Homsap ...T.A..CACT..TCT...TGCT...C-AG.----------------------------------------- TRAV20_1_F_Turtru ...T.A..CACT...CT...TGCT....-AGA----------------------------------------- TRAV20_1D_F_Turtru ...T.A..CACT...CT...TGCT...A-AGA----------------------------------------- ; end;