#NEXUS [written Sun Jan 10 09:05:12 GMT+02:00 2021 by Mesquite version 3.61 (build 927) at Eugene-PC/127.0.0.1] BEGIN TAXA; TITLE Taxa; DIMENSIONS NTAX=18; TAXLABELS Sanghuangporus_microcystideus_KP030787 Inonotus_hymenonitens_KU886152 Inonotus_obliquus_DQ103883 Inonotus_tricolor_JN169787 Inonotus_krawtzewii_KF446603 Inonotus_niveomarginatus_KC456245 'Inonotus setuloso-croceus KP279292' Inonotus_rickii_FJ667753 Inonotus_glomeratus_AF247968 Inonotus_hispidus_FR686562 Inonotus_hymenonitens_KU886153 Inonotus_ulmicola_KF446606 'Inonotus setuloso-croceus KP279293' Inonotus_krawtzewii_KF446604 'Inonotus nidus-pici KF446607' Inonotus_tricolor_KP030786 Inonotus_niveomarginatus_KC999904 Inonotus_rickii_KR905931 ; END; BEGIN CHARACTERS; TITLE Inonotus_ITS_dataset; DIMENSIONS NCHAR=840; FORMAT DATATYPE = DNA GAP = - MISSING = ?; MATRIX Sanghuangporus_microcystideus_KP030787 GCTGGCGCGTGGAAACG--CGCA-TGTGCACGGT-TTTCGCGCTCAAATCCATCTCTTTAAACCCCCTGTGCACCTATAAT-CGCGAGTCGAAAG---TTAGTAGTCT-TTTGAAGGCGTGGGTGTGTTG-----TTGGTCTTGTAAGTAA----ATCAGTAGAAAGGTGAAATCGGGTGAGCTTACTTACCCGGTAGTAATCTTTTGAAC--GTCGAAAGCAAAGGCG-------------AAACGATCTTCTCCCTATTCCTCCGTTCGGGCGAAGGCTTTGGCTTGTGTGTGTTAYTACACAAACAC--CTTTAATTGTC-TTTGTGAATGTATTTGCTCC-TTGTGGGCGAAAA--TMAATACAACTTTCAACAACGGATCTCTTGGCTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCCCCTTGGTATTCCGAGGGGCATGCCTGTTTGAGTGTCATGTTAATCTCAAACCGCTAGTCTTT-------------CTTAATTGA------AGGGCTTTGAGGTTTGGACTTGGAGGCTTCATTGCTGGCGTGGGGGTTCC-----CCTTTCGGGAGGACTTCGTCCGGCTCCTCTTAAATGCATTAGCTGGGCTTTGGCTCGCG-TTTACGGTGTAATAGT-------TAATTCCATTCACCAA-GGAACGCTTGCCTTACGGGCCTGCTTCTAATCGTCCGCA----------------TCGTCGGAAAAGGAGCT-----GTTGCTGC-TCCTT---CTTGACCCCTTTGACCT Inonotus_hymenonitens_KU886152 GCTGATGC--GGAAG----CGTA-TGTGCACGAC-TTTCGTGCTCAAATCCA------TACAAACCCTGTGCACCTTAGA-------AGTCGAAG---CAAGTAGTCT-AGAAA---------------------GTGGGATTACAAGTAATGGGTAATGAGTGAATGCGGT------------------CTCGCAAAGTAGCTCGTGAAA--GTGAAAGTAGGAA-----------------------------------CACCGAGCGAGGCGAACGCTTTGGCTATTT-------TACTACAAACAT--TTTTTGTTGTC--TTGTGAATGTC-GTGCTCC-TTGTGGGCGAAA---TAAATACAACTTTCAACAACGGATCTCTTGGCTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCCCCTTGGTATTCCGGGGGGCATGCCTGTTTGAGTGTCATGTTAATCTCAAACCGCCTGTCTTT-------------CTTAATTG-------AAGACTCGAGGGTTTGGACTTGGAGG-TTTATTGCTGGTGTCCCCGAGGCTTC--ACTTGCCATGGGGTTCGCACTGGCTCCTCTGAAATGCATGAGCTAGACTTTGGCTCGCG-TTTACGGTGTAATAGTGAC--------TATTTTCACCA---GAGCGCCTGCCTAATAGGTCTGCTTCTAATCGTCC-------------------TTCGTGGACAAGGATCC-----CTGAGTGG-CCTTC---TTTGACACCTTTGACCT Inonotus_obliquus_DQ103883 GCTGGCAC--GGAAACGTTTGCA-TGTGCACGGCCTTTCGTGCTCAAATCCAAC--TCTCAAACCCCTGTGCACCTATACA------AGTTGAAGGTCTTAGTAGTTT-CT-------GTAATCGAACGGCAAGTCAAGTACGTCTAGTAAT----CAAGTACGAGGGTTTC---------------------------GGCCCTTGGAAAGTGTGAAAGATGGAAAGGC-AAGCT--TCAGAGACA--------------------AGGAGACGAAAAGCTT---TTGGCTT-----CATTACAAACACCAATATAATTGTT--ATGTGAATGAA-ATGCTCC-TTGTGGGCGATAA--TAAATACAACTTTCAACAACGGATCTCTAGGCTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCCCCTTGGTATTCCGAGGGGCATGCCTGTTTGAGTGTCATGTTAATCTCAAATCGCTCGTCTAT------------TCTTAATTGA------AGTGGCTTTCGATTTGGACTTGGAGG---TTTTGCTGGCCCGGGCGAC-------TTTGGTTGCCCTTGGTTTGTCGGCTCCTCTCAAATACATTAGCTGGACTTTGGTTCGCG-TTTACGGTGTAATAAT---------GTAATGTTCACCA---AGACGCTTGCCTAACAAGTCTGCTTCTAATAGTCCTTA-----------------AGTTGGACAAGGATCC-----CTTCGTTGGGCCTT---CTTGACACCTTTGACCT Inonotus_tricolor_JN169787 GCTGGCGC--GGAAACG--CGTACCGTGCACGGCCTTTCGTGCTCA-ATCCA------CTCAACCTCTGTGCACCTTAAT-------AGTTGGAG---TCAGTAGTCT-CGGG------------------------GGGATTACGAATCATAAGTAGAGTGCGAG--------------------------------------CTTGAAA--GTGAGAGTAAG--------------------------------------ACCGTTTGAGGCGAACGCTTTGACTTCT--------TATTATAAACAC----TTTGTTGTC--TTGTGAATGTA-ATGCTCCTTTGTGGGCGAAAAAGTTAATACAACTTTCAACAACGGATCTCTTGGCTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCCCCTTGGTATTCCGAGGGGCATGCCTGTTTGAGTGTCATGTTAATCTCAAACCGCTTGTTTTT------------GCTTAATTGC------AGAGGCTCGAGGTTTGGACTTGGAGGTCTTACTGCTGGC------------------TGTCTGTCGAAGACATGTCGGCTCCTCTTAAATGTATGAGCTGGACTTTGGTTCGCG-TTTACGGTGTAATAGT-------AACTACAATTCACCAA-TGAGCGCTTGCCTGAAGGGTCTGCTTCTAATCGTCTGGAT---------------TTCCCGGACAAGGATCC-----CTTAGTGG-CCTT----ATTGAAACCTTTGACCT Inonotus_krawtzewii_KF446603 GCTGGTGC--GGAAACG--CATA-TGTGCACGGC-TTTCGTGCTCAAATCCA-----CTCAAACCCCTGTGCACCTTTGAA-C----GGTTGAAG---CTAGTAGTTA-GTAACTGTAACTTTCGACTCGATGACTTAGTACTGTTAGTATT--AACTAGCAGGAAAAC--------------------------------------------GTCAAAGAGAAGAGAG---------------AGGG-------------------TGAAGGCGAACGCTTTGACTAGTTTATAT--TATTACAAACCC---TTTTATTGTT--ATGTGAATGTA-ATGCTCC-TTGTGGGCGATAATGTTAATACAACTTTCAACAACGGATCTCTAGGCTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCCCCTTGGTATTCCGAGGGGCATGCCTGTTTGAGTGTCGTGTTAATCTCAAATCACTTGTCTTA----TGTTTGCTTCTTGATTGAAGTAR-GCTGACTTGCGATTTGGACTTGGAGG--TTTATGCTGGCCCGGGCGACTTTGT----TGTTACCCTTTGGTTTGCCGGCTCCTCTTAAATACATTAGCTGGACTTTGGTTCGCG-TTTATGGTGTAATAGT-----GTTATTATGCTTCACCG---GAACGCTTGCCTAACGGGTCTGCTTCTAATCGTCCGTG----------------TAATAGGACAAGGATCC-----CTCAGTGG-CCTTAA-CTCTGACACCTTTGACCT Inonotus_niveomarginatus_KC456245 GCTGGTGC--GGAAACG--CACA-TGTGCACGGC-CTTTGCACTCAAATCCAA---ACTCAAACCCCTGTGCACTCAATAA-C----AGTTGAAC---CTAGTAGTCT-TTTGT----TCGTTCACTACAAAGAGCTAGTATACCGAATCAGTAGACTAGTAGGAAGAGCCT----------------------TGACGGCTCTTTCGAAC--GTTGAAAGTAAGGGGGAATGTTCGAAGTGGTGGGGT----------TTAATTACAAGAGGCGAACGGTTTGGCTTGTTTA-----TATTACAAACAC----TTTGTTGTT--ATGTGAATGTA-ATGCTCC-TTGTGGGCGAGAATTGAAATACAACTTTCAACAACGGATCTCTTGGCTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCCCCTTGGTATTCCGAGGGGCATGCCTGTTTGAGTGTCATGTTAATATCAAATCACTTGTCTTG-------------TTTAT----------TAAGACTCGCGATTTGGAGTTGGAGG--TTAATGCTGGCCCGGGCAATCGTAA--TACGTTGCTCTTGGATTTGTTGGCTCCTCTTAAATGCATTAGCTGGACTTTGGTTTGCG-CTGTCGGTGTAATAGTTAACACAGATTATGTTTCACCA---AAGCGCTTGCCTAGTGGGTCTGCTTCTAGTCGTCCGTA--------------------AGGACAAGGATCCCATCTCGTGGTGG-GCCTT---CTTGACACCTTTGACCT 'Inonotus setuloso-croceus KP279292' GCTGGTGC--GGAAACG--CGCA-TGTGCACGGCTTTTCGTGCTCAAATCCAA------TTAACCCCTGTGCACCTCAAG-------AGTCGGAG---TCAGTAGCCT-CT-------GTAATCGAACGGCTTG--AAGTAACGTCGG------------------------------------------------------CTGTGAAAG--GCAGACAGAAAAAGAGC-TCTTCAAAGAGAGAGG--------------------AGGAGGCGAAAGCTTT---TGGCTAA-----TATTACAAACACC-TTTTGATTGTTACATGTGAATGTA-ATGCTCC-TTGTGGGCRATAAT-GAAATACAACTTTCAACAACGGATCTCTTGGCTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCCCTTTGGTATTCCGAAGGGCATGCCTGTTTGAGTGTCATGTTAATCTCAAACCACTTGTCTAT-----------TTCGTTACTGA------ATGGACTTGTGGTTTGGACTTGGAGG--CTTTTGCTGGCCCGGGTGGCGG-----CTTCGTTACCCTTGGTTTGTCGGCTCCTCTGAAATGTATTAGCTGGACTTTGGTTCGCG-TTTACGGTGTAATAATAAT--AATCATTCATTTCACTA---AGACGCTTGCCTGAACGGTCTGCTTCTAATCGTCCTTG-----------------ACTTGGACAAGGATCCC----GTTAGTGG-GCCTT---CTTGACACCTTTGACCT Inonotus_rickii_FJ667753 GCTGGTAC--GGAAACG--TACA-TGTGCACGGC-TTTCGTGCTCAAATCCA-----CTCAAACCCCTGTGCACTTTGAAC------GGTTGAAG---TTAGTAGTCTAGTAAC----ACTCTCGACTC--CGACTTAGTACTGTGAGTAT----ACAAGTAGGAGGGCTTG--------------------CTTTTGCGGCCTTTCGAAC--GTTGAAAGCAGGAAAACGTTTAAGAGAAGAGAGGGT------------------GAAGGGCGAACGCTTTGACTAGTTTA-----TATTATAAACCC--TTTGTATTGTT--ATGTGAATGTA-ATGCTCC-TTGTGGGCGATAAT-GAAGTACAACTTTCAACAACGGATCTCTTGGCTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCCCCTTGGTATTCCGAGGGGCATGCCTGTTTGAGTGTCGTGTTAATCTCAAATCACTTGTCTTT----------------------------TTTGACTTGCGATTTGGACTTGGAGG--TTTATGCTGGCCCGGGCGACTTTGT----TGTTGCCCTTTGGTTTGTCGGCTCCTCTTAAATGCATTAGCTGGACTTTGGTTCGCG-TTTGCGGTGTAATAGTGT---GTTATAATACTTCACCA---GAGCGCTTGCCTAACGGGTCTGCTTCTAATCGTCCGTGTTACTTTATTG-----TAATA-GACAAGGATCC-----CTTAGTGG-CCTTAC-ATCTGACACCTTTGACCT Inonotus_glomeratus_AF247968 GCTGGCGC--GGAAACG--CGCA-TGTGCACGAC-CTTCGTGCTCA-ATCCA------TTCAACCCCTGTGCACCTTAACA------AGTCGAAG---TCAGTAGTCT-CGTTGTG-------------------GGACTTTTGCAAGTAATCAGTAAAGGGCGAACGCGTC--------------------AAGTTAGTAGCCCTTGAAA--GTGAAAGTGAAGAGA----------------------------------ACGCTGCGAGGCGAACGCTTTGGCTTC---------ATTTATAAACACC---TTTATTGTC--ATGTGAATGTA-ATGCTCC-TTGTGGGCGAGAA--TAAATACAACTTTCAACAACGGATCTCTTGGCTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCCCCTTGGTATTCCGAGGGGCATGCCTGTTTGAGTGTCATGTTAATATCAAACCGCTCGTCTTT-------------CTTAACTCG------AAGGGCTTGAGGTTTGGACTTGGAGGTTTTTTTGCTGGC-------------------------ACTCGTTTTGTCGGCTCCTCTTAAATGCATTAGCTGGACTTTGGTTCGCG-TTTACGGTGTGATAGT-------AACGTTGTTTCACCAGACGAGCGCTTGCCTAACGGGTCCGCTTCTAATCGTCCGGG----------------TTCTCGGACAAGGATCC-----CTTAGTGG-CCTTCATTTTTGACACCTTTGACCT Inonotus_hispidus_FR686562 GCTGGTGC--GGAAACG--CACA-TGTGCACGGC-TTTCGTGCTCAAATCCA----TTTCAAACCCCTGTGCACTTTTGAACC----GGTTGAAG---TTAGTAGTGA-GTAAC----ACTTTCGACTTG-CGACCTAGTACTGCGAGTAAT---ACTAGTAGGAGGGT------------------------CTTTGAGGCCTTTCCAAC--GTTGAAAGCGGGAAAC--GTTAAGAGAAGAGAGGG-------------------TGAAGGCGAGCGCTTTGACTAGTTTG-----TATTACAAACCC---TTTTATTGTT--ATGTGAATGTA-ATGCTCC-TTGTGGGCGATAA--TTTGTACAACTTTCAACAACGGATCTCTAGGCTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCCCCTTGGTATTCCGAGGGGCATGCCTGTTTGAGTGTCGTGTTAATCTCAAATCACTTGTCTTTATTATGTTTGCTTCTTGGTTGAAGTAGGCTTGACTTGCGATTTGGACTTGGAGG--TTATTGCTGGCCCGGGCGACGCTTTGTTGTGTTGCCCTTTGGTTTGTCGGCTCCTCTTAAATGCATTAGCTGGACTTTGGTTCGCGTTTTATGGTGTAATAGT-----ATTGTTATGCTTCACCG---GAGCGCTTGCCTAAGGGGTCTGCTTCTAATCGTCCGTGTTACTTTTTTGTAATGTAATAGGACAAGGAACG-----CTTAGTGG-CCTTAA-CTCTGACACCTTTGACCT Inonotus_hymenonitens_KU886153 GCTGATGC--GGAAG----CGTA-TGTGCACGAC-TTTCGTGCTCAAATCCA------TACAAACCCTGTGCACCTTAGA-------AGTCGAAG---CAAGTAGTCT-AGAAA---------------------GTGGGATTACAAGTAATGGGTAATGAGTGAATGCGGT------------------CTCGCAAAGTAGCTCGTGAAA--GTGAAAGTAGGAA-----------------------------------CACCGAGCGAGGCGAACGCTTTGGCTATTT-------TACTACAAACAT--TTTTTGTTGTC--TTGTGAATGTC-GTGCTCC-TTGTGGGCGAAA---TAAATACAACTTTCAACAACGGATCTCTTGGCTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCCCCTTGGTATTCCGGGGGGCATGCCTGTTTGAGTGTCATGTTAATCTCAAACCGCCTGTCTTT-------------CTTAATTG-------AAGACTCGAGGGTTTGGACTTGGAGG-TTTATTGCTGGTGTCCCCGAGGCTTC--ACTTGCCATGGGGTTCGCACTGGCTCCTCTGAAATGCATGAGCTAGACTTTGGCTCGCG-TTTACGGTGTAATAGTGAC--------TATTTTCACCA---GAGCGCCTGCCTAATAGGTCTGCTTCTAATCGTCC-------------------TTCGTGGACAAGGATCC-----CTGAGTGG-CCTTC---TTTGACACCTTTGACCT Inonotus_ulmicola_KF446606 GCTGGCAC--GGAGACG--TGCA-TGTGCACGGCCTTTCGTGTTCGAATCTTAC--TCTTAAACCCCTGTGCACCTTAACA------AGTTGAAGGTCTTAGTAGTTT-CT-------GTAATCAAACGGCAGGTCAAGTACGTCGAGTAAT-----TAGTACGAGGGTTTC---------------------------GGCCCTTGGGAA--GTGAAAGACAGAAAGGC-AGGCCAAGTAGAGACA--------------------AGGAGACGAAAAGCTT---TTGGCTT-----TATTACAAACACC-ATATTATTGTT--ATGTGAATGAA-ATGCTCC-TTGTGGGCGATAA--TAAATACAACTTTCAACAACGGATCTCTAGGCTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCCCCTTGGTATTCCGAGGGGCATGCCTGTTTGAGTGTCATGTTAATCTCAAATCGGTTGTCTAT------------TCTTAATTGA------AGTGACTTTCGATTTGGACTTGGAGG----CTTGCTGGCCCGGGCGAC-------TTTGGTTGCCCTCGGTTTGTCGGCTCCTCTTAAATACATTAGCTGGACTTTGGTTCGCG-TTTACGGTGTAATAAT---------GTAATGTTCACTA---AAACGCTTGCCTAACGAGTCTGCTTCTAATCGTCCTTA-----------------AGTTGGACAAGGATCC-----CTTGATCGGGCCTTC-TTTTGACACCTTTGACCT 'Inonotus setuloso-croceus KP279293' GCTGGTGC--GG-AACG--CGCA-TGTGCACGGCTTTTCGTGCTCAAATCCAA------TTAACCCCTGTGCACCTCAAG-------AGTCGGAG---TCAGTAGCCT-CT-------GTAATCGAACGGCTTG--AAGWAACGTCGG------------------------------------------------------CTGTGAAAG--GCAGACAGAAAAAGAGC-TCTTCAAAGAGAGAGG--------------------AGGAGGCGAAAGCTTT---TGGCTAA-----TATTACAAACACC-TTTTGATTGTTACATGTGAATGTA-ATGCTCC-TTGTGGGCGATAAT-GAAATACAACTTTCAACAACGGATCTCTTGGCTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCCCTTTGGTATTCCGAAGGGCATGCCTGTTTGAGTGTCATGTTAATCTCAAACCACTTGTCTAT-----------TTCGTTACTGA------ATGGACTTGTGGTTTGGACTTGGAGG--CTTTTGCTGGCCCGGGTGGCGG-----CTTCGTTACCCTTGGTTTGTCGGCTCCTCTGAAATGTATTAGCTGGACTTTGGTTCGCG-TTTACGGTGTAATAATAAT--AATCATTCATTTCACTA---AGACGCTTGCCTGAACGGTCTGCTTCTAATCGTCCTTG-----------------ACTTGGACAAGGATCCC----GTTAGTGG-GCCTT---CTTGACACCTTTGACCT Inonotus_krawtzewii_KF446604 GCTGGTGC--GGAAACG--CATA-TGTGCACGGC-TTTCGTGCTCAAATCCA-----CTCAAACCCCTGTGCACCTTTGAA-C----GGTTGAAG---CTAGTAGTTA-GTAACTGTAACTTTCGACTCGATGACTTAGTACTGTTAGTATT--AACTAGCAGGAAAAC--------------------------------------------GTCAAAGAGAAGAGAG---------------AAGG-------------------TGAAGGCGAACGCTTTGACTAGTTTATAT--TATTACAAACCC---TTTTATTGTT--ATGTGAATGTA-ATGCTCC-TTGTGGGCGATAATGTTAATACAACTTTCAACAACGGATCTCTAGGCTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCCCCTTGGTATTCCGAGGGGCATGCCTGTTTGAGTGTCGTGTTAATCTCAAATCACTTGTCTTA----TGTTTGCTTCTTGATTGAAGTAG-GCTGACTTGCGATTTGGACTTGGAGG--TTTATGCTGGCCCGGGCGACTTTGT----TGTTACCCTTTGGTTTGCCGGCTCCTCTTAAATACATTAGCTGGACTTTGGTTCGCG-TTTATGGTGTAATAGT-----GTTATTATGCTTCACCG---GAGCGCTTGCCTAACGGGTCTGCTTCTAATCGTCCGTG----------------TAATAGGACAAGGATCC-----CTCAGTGG-CCTTAA-CTCTGACACCTTTGACCT 'Inonotus nidus-pici KF446607' GCTGGTGC--GGAAACG--CGCA-TGTGCACGGCTTTTCGTGATCAAATCCAA-----TCAACCCCCTGTGCACCTAAAGA------GTCGGAGG---TCAGTAGCCT-CT-------GTAATCGAACTGCTTG--TAGTATGTCC-------------------------------------------------------------------GCAGACAG-AAGAGAGC-TCTTCGGGGA--------------------------GGGAGGTGAAAGCTTT----TGGCTA-----ATTTATAGACACC-TATTGTTTGTT--ATGTGAATGTA-ATGCTCC-TTGTGGGCGATAAT-GAAATACAACTTTCAACAACGGATCTCTTGGCTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCCCCTTGGTATTCCGAGGGGCATGCCTGTTTGAGTGTCATGTTAATCTCAAATCACTTGTCTAT------------TCTTGACCGA------ATGGAGTAGTGGTTTGGACTTGGAGG--TCTTTGCTGGCCCGGGCGG--------TTTGATTGCCCTTGGTTTGTCGGCTCCTCTCAAATGCATTAGCTGGRCTTTGGTTCGCG-TTTACGGTGTAATAAT---------ATTCGTTTCACTA---AGACGCTTGCCTAGACGGTCTGCTTCTAATCGTCCTTA-----------------AGTTGGACAAGGATCC-----GTGAGTGG-CCTTT---CTTGACACCTTTGACCT Inonotus_tricolor_KP030786 GCTGGCGC--GGAAACG--CGTACCGTGCACGGCCTTTCGTGCTCA-ATCCA------CTCAACCTCTGTGCACCTTAAT-------AGTTGGAG---TCAGTAGTCT-CGGG------------------------GGGATTACGAATCATAAGTAGAGTGCGAG--------------------------------------CTTGAAA--GTGAGAGTAAG--------------------------------------ACCGTTTGAGGCGAACGCTTTGACTTCT--------TATTATAAACAC----TTTGTTGTC--TTGTGAATGTA-ATGCTCCTTTGTGGGCGAAAAAGTTAATACAACTTTCAACAACGGATCTCTTGGCTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCCCCTTGGTATTCCGAGGGGCATGCCTGTTTGAGTGTCATGTTAATCTCAAACCGCTTGTTTTT------------GCTTAATTGC------AGAGGCTCGAGGTTTGGACTTGGAGGTCTTACTGCTGGC------------------TGTCTGTTGAAGACATGTCGGCTCCTCTTAAATGTATGAGCTGGACTTTGGTTCGCG-TTTACGGTGTAATAGT-------AACTACAATTCACTAA-TGAGCGCTTGCCTGAAGGGTCTGCTTCTAATCGTCTGGAT---------------TTCCCGGACAAGGATCC-----CTTAGTGG-CCTT----ATTGAAACCTTTGACCT Inonotus_niveomarginatus_KC999904 GCTGGTGC--GGAAACG--CACA-TGTGCACGGC-CTTTGCACTCAAATCCAA---ACTCAAACCCCTGTGCACTCAATAA-C----AGTTGAAC---CTAGTAGTCT-TTTGT----TCGTTCACTACAAAGAGCTAGTATACCGAATCAGTAGACTAGTAGGAAGAGCCT----------------------TGACGGCTCTTTCGAAC--GTTGAAAGTAAGGGGGAATGTTCGAAGTGGTGGGGT----------TTAATTACAAGAGGCGAACGGTTTGGCTTGTTTA-----TATTACAAACAC----TTTGTTGTT--ATGTGAATGTA-ATGCTCC-TTGTGGGCGAGAATTGAAATACAACTTTCAACAACGGATCTCTTGGCTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCCCCTTGGTATTCCGAGGGGCATGCCTGTTTGAGTGTCATGTTAATATCAAATCACTTGTCTTG-------------TTTAT----------TAAGACTCGCGATTTGGAGTTGGAGG--TTAATGCTGGCCCGGGCAATCGTAA--TACGTTGCTCTTGGATTTGTTGGCTCCTCTTAAATGCATTAGCTGGACTTTGGTTTGCG-CTGTCGGTGTAATAGTTAACACAGATTATGTTTCACCA---AAGCGCTTGCCTAGTGGGTCTGCTTCTAGTCGTCCGTA--------------------AGGACAAGGATCCCATCTCGTGGTGG-GCCTT---CTTGACACCTTTGACCT Inonotus_rickii_KR905931 GCTGGTAC--GGAAACG--TACA-TGTGCACGGC-TTTCGTGCTCAAATCCA-----CTCAAACCCCTGTGCACTTTGAAC------GGTTGAAG---TTAGTAGTCTAGTAAC----ACTCTCGACTC--CGACTTAGTACTGTGAGTAT----ACAAGTAGGAGGGCTTG--------------------CTTTTGCAGCCTTTCGAAC--GGTGAAAGCAGGAAAACGTTCAAGAGAAGAGAGGGT------------------GAAGGGCGAACGCTTTGACTAGTTTA-----TATTATAAACCC--TTTGTATTGTT--ATGTGAATGTA-ATGCTCC-TTGTGGGCGATAAT-GAAGTACAACTTTCAACAACGGATCTCTTGGCTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCCCCTTGGTATTCCGAGGGGCATGCCTGTTTGAGTGTCGTGTTAATCTCAAATCACTTGTCCTT----------------------------TTTGACTTGCGATTTGGACTTGGAGG--TTTATGCTGGCCCGGGCGACTTTGT----TGTTGCCCTTTGGTTTGTCGGCTCCTCTTAAATGCATTAGCTGGACTTTGGTTCGCG-TTTGCGGTGTAATAGTGT---GTTATAATACTTCACCA---GAGCGCTTGCCTAACGGGTCTGCTTCTAATCGTCCGTGTTACTTTATTG-----TAATAGGACAAGGATCC-----CTTAGTGGCCCTTAC-ATCTGACACCTTTGACCT ; END; BEGIN ASSUMPTIONS; TYPESET * UNTITLED = unord: 1- 840; END; BEGIN CODONS; CODESET * UNTITLED = universal: 1- 840; END; BEGIN MESQUITECHARMODELS; ProbModelSet * UNTITLED = 'Jukes-Cantor': 1- 840; END; Begin MESQUITE; MESQUITESCRIPTVERSION 2; TITLE AUTO; tell ProjectCoordinator; timeSaved 1610262312163; getEmployee #mesquite.minimal.ManageTaxa.ManageTaxa; tell It; setID 0 5301071381709844045; endTell; getEmployee #mesquite.charMatrices.ManageCharacters.ManageCharacters; tell It; setID 0 1661290969552196315; mqVersion 361; checksumv 0 3 150418716 null getNumChars 840 numChars 840 getNumTaxa 18 numTaxa 18 short true bits 2305843009213693967 states 15 sumSquaresStatesOnly 299613.0 sumSquares 4.6116860184274801E18 longCompressibleToShort false usingShortMatrix true NumFiles 1 NumMatrices 1; mqVersion; endTell; getWindow; tell It; suppress; setResourcesState false false 235; setPopoutState 400; setExplanationSize 0; setAnnotationSize 0; setFontIncAnnot 0; setFontIncExp 0; setSize 1366 637; setLocation -9 0; setFont SanSerif; setFontSize 10; getToolPalette; tell It; endTell; desuppress; endTell; getEmployee #mesquite.minimal.ManageTaxa.ManageTaxa; tell It; showTaxa #5301071381709844045 #mesquite.lists.TaxonList.TaxonList; tell It; setTaxa #5301071381709844045; getWindow; tell It; useTargetValue off; setTargetValue ; newAssistant #mesquite.lists.TaxonListCurrPartition.TaxonListCurrPartition; newAssistant #mesquite.lists.DefaultTaxaOrder.DefaultTaxaOrder; getTable; tell It; rowNamesWidth 293; endTell; setExplanationSize 30; setAnnotationSize 20; setFontIncAnnot 0; setFontIncExp 0; setSize 1131 565; setLocation -9 0; setFont SanSerif; setFontSize 14; getToolPalette; tell It; setTool mesquite.lists.TaxonList.TaxonListWindow.ibeam; endTell; endTell; showWindow; getEmployee #mesquite.lists.ColorTaxon.ColorTaxon; tell It; setColor Red; removeColor off; endTell; getEmployee #mesquite.lists.TaxonListAnnotPanel.TaxonListAnnotPanel; tell It; togglePanel off; endTell; endTell; endTell; getEmployee #mesquite.charMatrices.BasicDataWindowCoord.BasicDataWindowCoord; tell It; showDataWindow #1661290969552196315 #mesquite.charMatrices.BasicDataWindowMaker.BasicDataWindowMaker; tell It; getWindow; tell It; getTable; tell It; rowNamesWidth 317; endTell; setExplanationSize 30; setAnnotationSize 20; setFontIncAnnot 0; setFontIncExp 0; setSize 1131 565; setLocation -9 0; setFont SanSerif; setFontSize 14; getToolPalette; tell It; setTool mesquite.charMatrices.BasicDataWindowMaker.BasicDataWindow.ibeam; endTell; setActive; setTool mesquite.charMatrices.BasicDataWindowMaker.BasicDataWindow.ibeam; colorCells #mesquite.charMatrices.ColorByState.ColorByState; tell It; setStateLimit 9; toggleUniformMaximum on; endTell; colorRowNames #mesquite.charMatrices.TaxonGroupColor.TaxonGroupColor; colorColumnNames #mesquite.charMatrices.CharGroupColor.CharGroupColor; colorText #mesquite.charMatrices.NoColor.NoColor; setBackground White; toggleShowNames on; toggleShowTaxonNames on; toggleTight off; toggleThinRows off; toggleShowChanges off; toggleSeparateLines off; toggleShowStates on; toggleReduceCellBorders off; toggleAutoWCharNames off; toggleAutoTaxonNames off; toggleShowDefaultCharNames off; toggleConstrainCW on; toggleBirdsEye off; toggleShowPaleGrid off; toggleShowPaleCellColors off; toggleShowPaleExcluded off; togglePaleInapplicable on; togglePaleMissing off; toggleShowBoldCellText off; toggleAllowAutosize off; toggleColorsPanel off; toggleLinkedScrolling on; toggleScrollLinkedTables off; endTell; showWindow; getWindow; tell It; forceAutosize; endTell; getEmployee #mesquite.charMatrices.AlterData.AlterData; tell It; toggleBySubmenus off; endTell; getEmployee #mesquite.charMatrices.ColorCells.ColorCells; tell It; setColor Red; removeColor off; endTell; getEmployee #mesquite.categ.StateNamesStrip.StateNamesStrip; tell It; showStrip off; endTell; getEmployee #mesquite.charMatrices.AnnotPanel.AnnotPanel; tell It; togglePanel off; endTell; getEmployee #mesquite.charMatrices.CharReferenceStrip.CharReferenceStrip; tell It; showStrip off; endTell; getEmployee #mesquite.charMatrices.QuickKeySelector.QuickKeySelector; tell It; autotabOff; endTell; getEmployee #mesquite.charMatrices.SelSummaryStrip.SelSummaryStrip; tell It; showStrip off; endTell; getEmployee #mesquite.align.AlignToDropped.AlignToDropped; tell It; gapCosts 8 3 2 2; subCosts 10 5 10 10 10 5 5 10 10 10 5 10; endTell; getEmployee #mesquite.molec.ColorByAA.ColorByAA; tell It; emphasizeDegeneracy off; endTell; getEmployee #mesquite.molec.SequenceInfoEditor.SequenceInfoEditor; tell It; panelOpen false; endTell; endTell; endTell; endTell; end;