NEXUS [File created by TreeBASE: 1/16/09 15:32:01] [Matrix accession#: M3554] BEGIN TAXA; TITLE M3554; DIMENSIONS NTAX=177; TAXLABELS Cuscuta_yucatana Cuscuta_xanthochortos_carinata Cuscuta_woodsonii_978 Cuscuta_woodsonii_729_916 Cuscuta_werdermanii Cuscuta_warneri Cuscuta_victoriana_684_685 Cuscuta_victoriana_678_683 Cuscuta_veatchii_760 Cuscuta_veatchii_580 Cuscuta_veatchii_521 Cuscuta_umbrosa Cuscuta_umbellata_reflexa_577 Cuscuta_umbellata_reflexa_1033 Cuscuta_umbellata_reflexa_1030 Cuscuta_umbellata_reflexa_1027 Cuscuta_umbellata_reflexa_1015 Cuscuta_umbellata_759 Cuscuta_umbellata_576 Cuscuta_umbellata_557 Cuscuta_umbellata_526 Cuscuta_umbellata_516 Cuscuta_tuberculata_764 Cuscuta_tuberculata_763 Cuscuta_tuberculata_762 Cuscuta_tuberculata_737 Cuscuta_tuberculata_554 Cuscuta_tinctoria_574_766 Cuscuta_tinctoria_573 Cuscuta_tasmanica Cuscuta_suksdorfii_635_636 Cuscuta_suksdorfii_470 Cuscuta_subinclusa_644 Cuscuta_subinclusa_501 Cuscuta_subinclusa_197 Cuscuta_suaveolens_996 Cuscuta_suaveolens_791 Cuscuta_suaveolens_790 Cuscuta_strobilacea Cuscuta_stenolepis_781 Cuscuta_stenolepis_779 Cuscuta_squamata Cuscuta_sidarum_519_692_751 Cuscuta_sidarum_1005 Cuscuta_serruloba Cuscuta_sandwichiana_748 Cuscuta_sandwichiana_686 Cuscuta_sandwichiana_155 Cuscuta_salina_salina_652_653 Cuscuta_salina_salina_477_478_641 Cuscuta_salina_major Cuscuta_runyonii Cuscuta_rugosiceps_745 Cuscuta_rugosiceps_517_915 Cuscuta_rostrata Cuscuta_racemosa_miniata Cuscuta_racemosa Cuscuta_purpusii_928 Cuscuta_purpusii_898_1013_1025 Cuscuta_prismatica Cuscuta_potosina_globifera Cuscuta_potosina_845 Cuscuta_potosina_592 Cuscuta_polygonorum Cuscuta_polyanthemos Cuscuta_platyloba Cuscuta_plattensis Cuscuta_pentagona_667 Cuscuta_pentagona_468 Cuscuta_pentagona_464 Cuscuta_pentagona_456 Cuscuta_parviflora_elongata Cuscuta_partita Cuscuta_odontolepis_730 Cuscuta_odontolepis_587 Cuscuta_occidentalis_californica Cuscuta_occidentalis_504_647_648 Cuscuta_occidentalis_503 Cuscuta_obtusiflora_glandulosa Cuscuta_obtusiflora Cuscuta_nevadensis_585 Cuscuta_nevadensis_476 Cuscuta_mitriformis_584 Cuscuta_mitriformis_556 Cuscuta_micrantha_988 Cuscuta_micrantha_709 Cuscuta_micrantha_708 Cuscuta_mcvaughii Cuscuta_macrocephala_614_731 Cuscuta_macrocephala_613 Cuscuta_longiloba Cuscuta_lindsayi Cuscuta_liliputana_848 Cuscuta_liliputana_665 Cuscuta_liliputana_664 Cuscuta_leptantha_884 Cuscuta_leptantha_719 Cuscuta_leptantha_608 Cuscuta_jalapensis_607 Cuscuta_jalapensis_606 Cuscuta_jalapensis_518_617 Cuscuta_indecora_neuropeltata Cuscuta_indecora_longisepala Cuscuta_indecora_attenuata_723 Cuscuta_indecora_attenuata_721_724 Cuscuta_indecora_561_720_728 Cuscuta_indecora_525 Cuscuta_incurvata Cuscuta_hyalina_994 Cuscuta_hyalina_889 Cuscuta_hyalina_875 Cuscuta_howelliana_654_656 Cuscuta_howelliana_357_655 Cuscuta_haughtii Cuscuta_harperi Cuscuta_gymnocarpa Cuscuta_gronovii_latiflora_704 Cuscuta_gronovii_latiflora_703 Cuscuta_gronovii_calyptrata Cuscuta_gronovii_702 Cuscuta_gronovii_343 Cuscuta_gronovii_194_453_467_705 Cuscuta_gracillima_621 Cuscuta_gracillima_599_600_620 Cuscuta_glomerata_597_598 Cuscuta_glomerata_462_619 Cuscuta_globulosa Cuscuta_glabrior_825 Cuscuta_glabrior_742 Cuscuta_glabrior_596 Cuscuta_desmouliniana_571 Cuscuta_desmouliniana_1161 Cuscuta_denticulata_668 Cuscuta_denticulata_485 Cuscuta_denticulata_165 Cuscuta_decipiens_981_1014 Cuscuta_decipiens_458 Cuscuta_cuspidata Cuscuta_cozumeliensis Cuscuta_costaricensis Cuscuta_corymbosa_stylosa Cuscuta_corymbosa_grandiflora_959 Cuscuta_corymbosa_grandiflora_695_696 Cuscuta_coryli Cuscuta_corniculata Cuscuta_compacta Cuscuta_colombiana Cuscuta_chinensis_837 Cuscuta_chinensis_459 Cuscuta_chapalana Cuscuta_cf._cozumeliensis Cuscuta_cephalanthi Cuscuta_campestris_894 Cuscuta_campestris_487 Cuscuta_campestris_483 Cuscuta_campestris_411 Cuscuta_campestris_202 Cuscuta_californica_occidentalis Cuscuta_californica_brachycalyx Cuscuta_californica_637 Cuscuta_californica_147_499_645 Cuscuta_burrelli Cuscuta_bifurcata Cuscuta_australis_tinei_640 Cuscuta_australis_tinei_639 Cuscuta_australis_792 Cuscuta_australis_679 Cuscuta_australis_547 Cuscuta_aurea Cuscuta_ariesteguietae Cuscuta_applanata_674 Cuscuta_applanata_535 Cuscuta_applanata_508 Cuscuta_applanata_507 Cuscuta_americana Cuscuta_aff._floribunda Cuscuta_acuta ; END; BEGIN CHARACTERS; TITLE M3554; DIMENSIONS NCHAR=689; FORMAT DATATYPE = DNA MISSING = ? GAP = - ; MATRIX Cuscuta_yucatana ----------------------CTTAATTGGATTGAGCCTTGGTATGGAAACTTAC-TAAGTGATCACTTTCAAATTCAGAGAAACCCTGGAAT-GAATACAAA----GGGCAATCCTGAGCCAAATCC---TTCTT------------ATACTCTT-------------ATAAAAAAA--CTAAGGA---------GAGGTGCAGAGACTCAACGGAAGCTTTTCT--AACCAATG-------CAAAA-AGAGAGTCTGATAGATCTTT-TTCCC-------AAACTGA-TTAGAGAATAAAGAGAGAGTCCTTTTCTACATGTCACT---ATGGACAGTAATGAAATTTT-CAGT--AAGAA-GAAAATCCGTCGATTTG-------AAAAATCATGAGGGTTCAAGTCCCTCTATCCCCAAACGCCT-----AAAAAATTGCTCTCT---CTATTTTTTTTTTT-CAT-TTGGTTGGTGATCGGTTT------AAATGGGAAACGTCCCTTTTTAACTTGCAATTTCC-GGTTTCATTTTCTTTGCTTGTCCCTAATC--------------TAATTT-AGAATTAAAATATAAAATA------------TGCAATAGGAGATG-GGTCGGGATAGCTCATTGGGTA--------------------------------------- Cuscuta_xanthochortos_carinata --------------------GACTTAATTGGATTGAGCCTTGGTATGGAAACTTAC-TAAGTGATCACTTTCAAATTCAGAGAAACCCTGGAAT-TAATAAAAA----GGGCAATCCTGAGCCAAATCC---TTGTT------------AGAATTTT-------------ATAAAAAAA--CTAAGGA---------AAGGTGCAGAGACTCAACGGGAGCTTTTCT--AACCAATT-------TAAAA-AAAGAGTCTGATATATCTTT-TTACC-------AAACTGA-TTAGAGAATAAAGAGAGAGTCCGTTTCTACATGTCAAT---ATGGACAGTAATGAAATTTT-CAGT--AAGAA-GAAAATCCGTTGATTTT-------AAAAATCGTGAGGGTTCAAGTCCCTCTATCCCCAAAAACCT-----AACAAATTACGCTCT-----------GTTTGGTACTTT--------------GGTT----CAAATGGGAACCGCCTTTTTTTAATGTGCACTCCCCTTT---TA--------------------------------------------------------------------------------------TG-GGTCGGGATAGCTCAGTCGGTAGAGCAGAGGACTGAAAATCCTCGTG-------------- Cuscuta_woodsonii_978 ------------------------------GATTGAGCCTTGGTATGGAAACTTAC-TAAGTGATCACTTTCAAATTCAGAGAAACCCTGGAAT-GAAGACAAT----GGGTAATCCTGAGCCAAATCC---TTTAT--------------------------------TATAAAAAAA--CTAAGGA---------GAGGTGCAGAGACTCAATGGAAGCTTTTCT--AACCAATA-------CAAAA-AGGGAGTCTGATATATCTTT-TTACCAA-------ACTGA-TCAGAGAATAAAGAGAGAGTCCTTTTCTACATGTCAAT---ATGGACAGTAATGAAATTTT-CAGT--AAGAA-GAAAATCCGTTGATTTT-------AAAAATCGTGAGGGTTCAAGTCCCTCTATCCCCAAAGGCCT------------------------CTGGTGCGCGGTTAAAATGGGGAACGTCTTTTT-----------TTAACTTGCAATCCCCTTA-------------------TTATTCGTTTTATTTTCCTTCAATA------TAATTATTAAATTT-ATAATTAGAATC-------------------TGCAATAGGAAATA-GGTCGGGATAGCTCAGTTGGTAGAGCAGAGGACTGAAAATCCTCGTGTCACC--------- Cuscuta_woodsonii_729_916 -------------------GGACTTAATTGGATTGAGCCTTGGTATGGAAACTTAC-TAAGTGATCACTTTCAAATTCAGAGAAACCCTGGAAT-GAAGACAAT----GGGTAATCCTGAGCCAAATCC---TTTAT--------------------------------TATAAAAAAA--CTAAGGA---------GAGGTGCAGAGACTCAATGGAAGCTTTTCT--AACCAATA-------CAAAA-AGGGAGTCTGATATATCTTT-TTACCAA-------ACTGA-TCAGAGAATAAAGAGAGAGTCCTTTTCTACATGTCAAT---ATGGACAGTAATGAAATTTT-CAGT--AAAAA-GAAAATCCGTTGATTTT-------AAAAATCGTGAGGGTTCAAGTCCCTCTATCCCCAAAGGCCT-----CAAAAACAACT----------GGTGCGCGGTTAAAATGGGGAACGTCTTTTT-----------TTAACTTGCAATCCCCTTA-------------------TTATTTGTTTTATTTTCCTTCAATA------TAATTATTAAATTT-ATAATTAGAATC-------------------TGCAATAGGAAATA-GGTCGGGATAGCTCAGTTGGTAGAGCAGAGGACTGAAAATCCTC----------------- Cuscuta_werdermanii ------------------------------GATTGAGCCTTGGTATGGAAACTTAC-TAAGTGATCACTTTCAAATTCAGAGAAACCCTGGAAT-TAATAAAAA----GGGTAATCCTGAGCCAAATCC---TTTTT------------AGAATTTT-------------ATAAAAAAA--CAAAGGA---------AAGGTGCAGAGACTCAACGGAAGGTTTTCT--AACCAATG-------TAAAA-AAAGAATCTGATATATCTTT-TTACC-------AAACTGA-TTAGAGAATAAAGAGAGAGTCC-TTTCTACATGTCAAT---ATAGACAGTAATGAAATTTT-CAGT--AAGAA-GAAAATCCGTCGATTTG-------AAAAATCGTGAGGGTTCAAGTCCCTCTATCCCCAAAAGCCT-----AAGAAATTACGCTCT-----------GCTTGGTATTTA------------------------AATGAGAACCGCCTTTTTT-AACGTGCACTCCCCTTT---TATGGGTTTCATTTCCCTT-------------------CAATAT---------AATC-------------------TACAGTGGGAAATGGGGTCGGGATAGCTCAGTCGGTAGAGCAGAGGACTGAAAATCCTCGTGTCACC--------- Cuscuta_warneri --------------------GACTTAATTGGATTGAGCCTTAGTATGGAAACTTAC-TAAGTGATCACTTTCAAATTCAGAGAAACCCTGGAATTAAAGAAAAG----GGGCAATCCTGAGCCAAATCC---TTT-TT-----------CTATTTTT-------------ATCACAAA---CTAAGGA---------TAGGTGCAGAGACTCAAAGGAAGCTTTTCT--AACAAATG-------CAAGT-----------------------------------CACTAA-TTTGAGAATAAAGAGAGAGTCCTTTTCTACGTATCAAT---ACAGATAGTAATGAAATTTT-CAGT--AAGAA-GAAAATCCGTGGATTTT-------AAAAATCGTGAGGGTTCAAGTCCCTCTATCCCCACAAAATA-----CTATTCCGCTCACCA--CCTTTATTTT----TCAG-TTGGTT------------------CAAATAAAAAAAAGCCCTTCT--------------------------CAGTTTT-----ACTCTCCTA--------------------------------------------TTAGTTACCTAAAGGAAATGAAGTCGGGATAGCTCAGCCGGTACAGCAGAGGACTGAAAATCCTCG---------------- Cuscuta_victoriana_684_685 ------------------------------GATTGAGCCTTGGTATGGAAACTTAC-TAAGTGATCACTTTCAAATTCAGAGAAACCCTGGAAT-GAAGACAAT----GGGCAATCCTGAGCCAAATCC---TTTTT------------ACAATTTT------------TATAAAAAAA--CTAAGGA---------AAGGTGCAGAGACTCAACGGAAGCTTTTCT--AACCAATA-------CAAAA-AGGGAGTCTGATATATCTTT-TTACCAA------ATCTGA-TTAGAGAATAAAGAGAGAGTCCTTTTCTACATGTCAAT---ATGGACAGTAATGAAATTTT-CAGT--AAGAA-GAAAATCCGTTGATTTT-------AAAAATCGTGAGGGTTCAAGTCCCTCTATCCCCAAAGGCCT-----AACAAACTACTCTCT--GCTTGGTGCATGGTTCAAATGGGGAACGTCTTTTT-----------TTAACTTGCAATCCCCTT--------------------TTATTGGTTTCATTTCCCTTCAATC--------------TCATTT-ATAATTAGAATC-------------------TGTAATAGGAAATA-GGTCGGGATAGCTCAGT-------------------------------------------- Cuscuta_victoriana_678_683 ------------------------------GATTGAGCCTTGGTATGGAAACTTAC-TAAGTGATCACTTTCAAATTCAGAGAAACCCTGGAAT-GAAGACAAT----GGGCAATCCTGAGCCAAATCC---TTTTT------------ACAATTTT------------TATAAAAAAA--CTAAGGA---------AAGGTGCAGAGACTCAACGGAAGCTTTTCT--AACCAATA-------CAAAA-AGGGAGTCTGATATAT----------AA------ATCTGA-TTAGAGAATAAAGAGAGAGTCCTTTTCTACATGTCAAT---ATGGACAGTAATGAAATTTT-CAGT--AAGAA-GAAAATCCGTTGATTTT-------AAAAATCGTGAGGGTTCAAGTCCCTCTATCCCCAAAGGCCT-----AACAAACTACTCTCT--GCTTGGTGCATGGTTCAAATGGGGAACGTCTTTTT-----------TTAACTTGCAATCCCCTT--------------------TTATTGATTTCATTTCCCTTCAATA--------------TAATTT-ATAATTATAATC-------------------TGTAATAGGAAATA-GGTCGGGATAGCTCAGTTGGTAGAGCAGAGGACTGAAAATCCT------------------ Cuscuta_veatchii_760 ------------------CGGACTTAATTGGATTGAGCCTTGGTATGGAAACTTAC-TAAGTGATAACTTTCAAATTCAGAGAAACCCTGGAAT-TAATACAAA----GGGCAATCCTGAGCCAAATCCTTTTTTTATATTGATAATTGATAATTTT-------------CGAAAAAAC--CTAAGGA---------GAGGTGCAGAGACTCAACGGAAGCTTTTCT--AACCAATG-------CAAAA-A-----------ATAGTTTT-TTACTACC----AATATGA-TTAGAGAATAAAGAGAGAGTCCTTTTCGACATGTCCAT---GTCGACAGTAATGAAATTTT-CAGTTAAAGAA-GAAAATCCGTCGATTTT-------TAAAATCATGAGGGTTCAAGTCCCTCTATCCCCAAAAGCCT-----CAAACACTACTCTCG----TTG-----------AAAGAGGAAACAACTTT-------------TGAATGTGCAATCCCC------------------------------ATATTATTACTTCAATA--------------AAATTT-AGAATTAGAATC-------------------AAGAGTAGGAAATG-AGTCGGGATAGCTCAGTCGGTAGAGCAGAGGACTGAAAATCCTCGTGTCACCA-------- Cuscuta_veatchii_580 ------------------CGGACTTAATTGGATTGAGCCTTGGTATGGAAACTTAC-TAAGTGATAACTTTCAAATTCAGAGAAACCCTGGAAT-TAATACAAA----GGGCAATCCTGAGCCAAATCCTTTTTTTATATTGATAATTGATAATTTT-------------CGAAAAAAC--CTAAGGA---------GAGGTGCAGAGACTCAACGGAAGCTTTTCT--AACCAATG-------CAAAA-A-----------ATAGTTTT-TTACTACC----AATATGA-TTAGAGAATAAAGAGAGAGTCCTTTTCGACATGTCCAT---GTCGACAGTAATGAAATTTT-CAGTTAAAGAA-GAAAATCCGTCGATTTT-------TAAAATCATGAGGGTTCAAGTCCCTCTATCCCCAAAAGCCT-----CAAACACTACTCTCG----TTG-----------AAAGAGGAAACAACTTT-------------TGAATGTGCAATCCCC------------------------------ATATTATTACTTCAATA--------------AAATTT-AGAATTAGAATC-------------------AAGAGTAGGAAATG-AGTCGGGATAGCTCAGTCGGTAGAGCAGAGGACTGAAAATCCTCGTGTCACCA-------- Cuscuta_veatchii_521 ------------------CGGACTTAATTGGATTGAGCCTTGGTATGGAAACTTAC-TAAGTGATAACTTTCAAATTCAGAGAAACCCTGGAAT-TAATACAAA----GGGCAATCCTGAGCCAAATCCTTTTTTTATATTGATAATTGATAATTTT-------------CGAAAAAAC--CTAAGGA---------GAGGTGCAGAGACTCAACGGAAGCTTTTCT--AACCAATG-------CAAAA-A-----------ATAGTTTT-TTACTACC----AATATGA-TTAGAGAATAAAGAGAGAGTCCTTTTCGACATGTCCAT---GTCGACAGTAATGAAATTTT-CAGTTAAAGAA-GAAAATCCGTCGATTTT-------TAAAATCATGAGGGTTCAAGTCCCTCTATCCCCAAAAGCCT-----CAAACACTACTCTCG----TTG-----------AAAGAGGAAACAACTTT-------------TGAATGTGCAATCCCC------------------------------ATATTATTACTTCAATA--------------AAATTT-AGAATTAGAATC-------------------AAGAGTAGGAAATG-AGTCGGGATAGCTCAGTCGGTAGAGCAGAGGACTGAAAATCCTCGTGTCACCA-------- Cuscuta_umbrosa ------------------CGGACTTAATTGGATTGAGCCTTGGTATGGAAACTTAC-TAAGTGATAACTTTCAAATTCAGAGAAACCCTGGAAT-TAATAGAAA----GGGCAATCCTGAGCCAAATCC---TTTTT------------ATAATTTT-------------ATAAAAAAC--TTAAGGA---------GAGGTGCAGAGACTCAACGGAAGCTTTTCT--AACCAACG-------CAAAA-T---------CAAGATCTTT-TTACCAA-----AAACTGA-TTAGAGAATAAAGAGAGAGTCCGTTTCTACATGTAAAC---ATGGACAGTAATGAAATTTT-CAGT--AGGAA-GAAAATCCGTCGATTTG-------AAAAATCGTGAGGGTTCAAGTCCCTCTATCCCCAAAAACCT-----CTGTTGGTACTTGGT---------TCAAATGGGAAA------TTGCCTTT-------------TTAGCGTGCAATCCCCTTC-------------------TTATTGGTTTCATTTCTCTTCAATA--------------AAATTT-AGGATTAGAATC-------------------TATAGTGGGAAATG-GGTCGGGATAGCTCAGTCGGTAGAGCAGAGGACTGAAAATCCTCGTG-------------- Cuscuta_umbellata_reflexa_577 ------------------CGGACTTAATTGGATTGAGCCTTGGTATGGAAACTTAC-TAAGTGATCACTTTCAAATTCAGAGAAACCCTGGAAC-AAATAAATG----GGGCAATCCTGAGCCAAATCC---TTTATT-----------CTTTTATT-------------CTAAAAAA---CTAAGGA---------TAGGTGCAGAGACTCAACGGAAGCTTTTCT--AACAAAGG-------CAAAA-AGAGCGTCT---------TT-TTAC--------AAA-----TTCGAGAATAAAGAGAGAGTCCTTTTCTACATGTCAAT---ATAGACAGCAATGAAATTTTTACGT--AATAA-GAAAATCCGTGGATTTG-------AAAAATCGTGAGGGTTCAAGTCCCTCTATCCCCATAGGCTA-----CTATGCCTTTAG-T-TGC------------------------ATTTGGTTTAGGA------AATTTGAAAAAACCCTTTCT-------AATTTGTACTTCCCTTTTACTTTATTGATTGCCTTTCCTTGTCC---------ATAAT-AAAATTTAATTT-------------------TCGATTAGGAAATC-GGTCGGGATAGCTCAGCCGGTAGAGCAGAGGACTGAAAATCCTCGTGT------------- Cuscuta_umbellata_reflexa_1033 ------------------CGGACTTAATTGGATTGAGCCTTGGTATGGAAACTTAC-TAAGTGATCACTTTCAAATTCAGAGAAACCCTGGAAC-AAATAAATG----GGGCAATCCTGAGCCAAATCC---TTTATT-----------CTTTTATT-------------CTAAAAAA---CTAAGGA---------TAGGTGCAGAGACTCAACGGAAGCTTTTCT--AACAAAGG-------CAAAA-AGAGCGTCT---------TT-TTAC--------AAA-----TTCGAGAATAAAGAGAGAGTCCTTTTCTACATGTCAAT---ATAGACAGCAATGAAATTTTTACGT--AATAA-GAAAATCCGTGGATTTG-------AAAAATCGTGAGGGTTCAAGTCCCTCTATCCCCATAGGCTA-----CTATGCCTTTAG-T-TGC------------------------ATTTGGTTTAGGA------AATTTGAAAAAACCCTTTCT-------AATTTGTACTTCCCTTTTACTTTATTGATTGCCTTTCCTTGTCC---------ATAAT-AAAATTTAATTT-------------------TCGATTAGGAAATC-GGTCGGGATAGCTCAGCCGGTAGAGCAGAGGACTGAAAATCCTCGTGT------------- Cuscuta_umbellata_reflexa_1030 ------------------CGGACTTAATTGGATTGAGCCTTGGTATGGAAACTTAC-TAAGTGATCACTTTCAAATTCAGAGAAACCCTGGAAC-AAATAAATG----GGGCAATCCTGAGCCAAATCC---TTTATT-----------CTTTTATT-------------CTAAAAAA---CTAAGGA---------TAGGTGCAGAGACTCAACGGAAGCTTTTCT--AACAAAGG-------CAAAA-AGAGCGTCT---------TT-TTAC--------AAA-----TTCGAGAATAAAGAGAGAGTCCTTTTCTACATGTCAAT---ATAGACAGCAATGAAATTTTTACGT--AATAA-GAAAATCCGTGGATTTG-------AAAAATCGTGAGGGTTCAAGTCCCTCTATCCCCATAGGCTA-----CTATGCCTTTAG-T-TGC------------------------ATTTGGTTTAGGA------AATTTGAAAAAACCCTTTCT-------AATTTGTACTTCCCTTTTACTTTATTGATTGCCTTTCCTTGTCC---------ATAAT-AAAATTTAATTT-------------------TCGATTAGGAAATC-GGTCGGGATAGCTCAGCCGGTAGAGCAGAGGACTGAAAATCCTCGTGT------------- Cuscuta_umbellata_reflexa_1027 ------------------CGGACTTAATTGGATTGAGCCTTGGTATGGAAACTTAC-TAAGTGATCACTTTCAAATTCAGAGAAACCCTGGAAC-AAATAAATG----GGGCAATCCTGAGCCAAATCC---TTTATT-----------CTTTTATT-------------CTAAAAAA---CTAAGGA---------TAGGTGCAGAGACTCAACGGAAGCTTTTCT--AACAAAGG-------CAAAA-AGAGCGTCT---------TT-TTAC--------AAA-----TTCGAGAATAAAGAGAGAGTCCTTTTCTACATGTCAAT---ATAGACAGCAATGAAATTTTTACGT--AATAA-GAAAATCCGTGGATTTG-------AAAAATCGTGAGGGTTCAAGTCCCTCTATCCCCATAGGCTA-----CTATGCCTTTAG-T-TGC------------------------ATTTGGTTTAGGA------AATTTGAAAAAACCCTTTCT-------AATTTGTACTTCCCTTTTACTTTATTGATTGCCTTTCCTTGTCC---------ATAAT-AAAATTTAATTT-------------------TCGATTAGGAAATC-GGTCGGGATAGCTCAGCCGGTAGAGCAGAGGACTGAAAATCCTCGTGT------------- Cuscuta_umbellata_reflexa_1015 ------------------CGGACTTAATTGGATTGAGCCTTGGTATGGAAACTTAC-TAAGTGATCACTTTCAAATTCAGAGAAACCCTGGAAC-AAATAAATG----GGGCAATCCTGAGCCAAATCC---TTTATT-----------CTTTTATT-------------CTAAAAAA---CTAAGGA---------TAGGTGCAGAGACTCAACGGAAGCTTTTCT--AACAAAGG-------CAAAA-AGAGCGTCT---------TT-TTAC--------AAA-----TTCGAGAATAAAGAGAGAGTCCTTTTCTACATGTCAAT---ATAGACAGCAATGAAATTTTTACGT--AATAA-GAAAATCCGTGGATTTG-------AAAAATCGTGAGGGTTCAAGTCCCTCTATCCCCATAGGCTA-----CTATGCCTTTAG-T-TGC------------------------ATTTGGTTTAGGA------AATTTGAAAAAACCCTTTCT-------AATTTGTACTTCCCTTTTACTTTATTGATTGCCTTTCCTTGTCC---------ATAAT-AAAATTTAATTT-------------------TCGATTAGGAAATC-GGTCGGGATAGCTCAGCCGGTAGAGCAGAGGACTGAAAATCCTCGTGT------------- Cuscuta_umbellata_759 ------------------------------GATTGAGCCTTGGTATGGAAACTTAC-TAAGTGATCACTTTCAAATTCAGAGAAACCCTGGAAC-AAATAAATG----GGGCAATCCTGAGCCAAATCC---TTTATT--------------------------------CTAAAAAA---CTAAGGA---------TAGGTGCAGAGACTCAATGGAAGCTTTTCT--AACAAAGG-------CAAAA-AGAGCGTCT---------TT-TTAC--------AAA-----TTAGAGAATAAAGAGAGAGTCCTTTTCTACATGTCAAT---ATAGACAGCAATGAAATTTT-AAGT--AAGAA-GAAAATCCGTGGATTTT-------AAAAATCATGAGGGTTCAAGTCCCTCTATCCCCATAGGCTG-----CTATGCCTTTTTTT-TGC-------------------------------------------ATTTTGAAAAAACCCTTTCT-------AATTTATATTTCCCTTTTAGTTTATTGATTATTGAG----GTCC---------ATAAT-AAAATT----------------------------ATTAGGAAATC-GGTCGGGATAGCTCAGCCGGTAGAGCAGAGGACTGAAAATCC------------------- Cuscuta_umbellata_576 ----------------TACGGACTTAATTGGATTGAGCCTTGGTATGGAAACTTAC-TAAGTGATCACTTTCAAATTCAGAGAAACCCTGGAAC-AAATAAATG----GGGCAATCCTGAGCCAAATCC---TTTATT--------------------------------CTAAAAAA---CTAAGGA---------TAGGTGCAGAGACTCAATGGAAGCTTTTCT--AACAAAGG-------CAAAA-AGAGCGTCT---------TT-TTAC--------AAA-----TTAGAGAATAAAGAGAGAGTCCTTTTCTACATGTCAAT---ATAGACAGCAATGAAATTTT-AAGT--AAGAA-GAAAATCCGTGGATTTT-------AAAAATCATGAGGGTTCAAGTCCCTCTATCCCCATAGGCTG-----CTATGCCTTTTTTT-TGC-------------------------------------------ATTTTGAAAAAACCCTTTCT-------AATTTATATTTCCCTTTTAGTTTATTGATTATTGAG----GTCC---------ATAAT-AAAATT----------------------------ATTAGGAAATC-GGTCGGGATAGCTCAGCCGGTAGAGCAGAGGACTGAAAATCCTCGTGTCACCAA------- Cuscuta_umbellata_557 ----------TGACGCTACGGACTTAATTGGATTGAGCCTTGGTATGGAAACTTAC-TAAGTGATCACTTTCAAATTCAGAGAAACCCTGGAAC-AAATAAATG----GGGCAATCCTGAGCCAAATCC---TTTATT--------------------------------CTAAAAAA---CTAAGGA---------TAGGTGCAGAGACTCAATGGAAGCTTTTCT--AACAAAGG-------CAAAA-AGAGCGTCT---------TT-TTAC--------AAA-----TTAGAGAATAAAGAGAGAGTCCTTTTCTACATGTCAAT---ATAGACAGCAATGAAATTTT-AAGT--AAGAA-GAAAATCCGTGGATTTT-------AAAAATCATGAGGGTTCAAGTCCCTCTATCCCCATAGGCTG-----CTATGCCTTTTTTT-TGC-------------------------------------------ATTTTGAAAAAACCCTTTCT-------AATTTATATTTCCCTTTTAGTTTATTGATTATTGAG----GTCC---------ATAAT-AAAATT----------------------------ATTAGGAAATC-GGTCGGGATAGCTCAGCCGGTACAGCAGAGGACTGAAAATCCTCGTGTCACCAA------- Cuscuta_umbellata_526 ----------------TACGGACTTAATTGGATTGAGCCTTGGTATGGAAACTTAC-TAAGTGATCACTTTCAAATTCAGAGAAACCCTGGAAC-AAATAAATG----GGGCAATCCTGAGCCAAATCC---TTTATT--------------------------------CTAAAAAA---CTAAGGA---------TAGGTGCAGAGACTCAATGGAAGCTTTTCT--AACAAAGG-------CAAAA-AGAGCGTCT---------TT-TTAC--------AAA-----TTAGAGAATAAAGAGAGAGTCCTTTTCTACATGTCAAT---ATAGACAGCAATGAAATTTT-AAGT--AAGAA-GAAAATCCGTGGATTTT-------AAAAATCATGAGGGTTCAAGTCCCTCTATCCCCATAGGCTG-----CTATGCC-TTTTTT-TGC-------------------------------------------ATTTTGAAAAAACCCTTTCT-------AATTTATATTTCCCTTTTAGTTTATTGATTATTGAG----GTCC---------ATAAT-AAAATT----------------------------ATTAGGAAATC-GGTCGGGATAGCTCAGCCGGTAGAGCAGAGGACTGAAAATCCTCGTGTCACCAATT----- Cuscuta_umbellata_516 -----------GACGCTACGGACTTAATTGGATTGAGCCTTGGTATGGAAACTTAC-TAAGTGATCACTTTCAAATTCAGAGAAACCCTGGAAC-AAATAAATG----GGGCAATCCTGAGCCAAATCC---TTTATT--------------------------------CTAAAAAA---CTAAGGA---------TAGGTGCAGAGACTCAATGGAAGCTTTTCT--AACAAAGG-------CAAAA-AGAGCGTCT---------TT-TTAC--------AAA-----TTAGAGAATAAAGAGAGAGTCCTTTTCTACATGTCAAT---ATAGACAGCAATGAAATTTT-AAGT--AAGAA-GAAAATCCGTGGATTTT-------AAAAATCATGAGGGTTCAAGTCCCTCTATCCCCATAGGCTG-----CTATGCCTTTTTTT-TGC-------------------------------------------ATTTTGAAAAAACCCTTTCT-------AATTTATATTTCCCTTTTAGTTTATTGATTATTGAG----GTCC---------ATAAT-AAAATT----------------------------ATTAGGAAATC-GGTCGGGATAGCTCAGCCGGTAGAGCAGAGGACTGAAAATCCTCGTGTCAC---------- Cuscuta_tuberculata_764 ----------------TACGGACTTAATTGGATTGAGCCTTGGTATGGAAACTTAC-TAAGTGATCACTTTCAAATTCAGAGAAACCCTGGAAG-AAATAAATA----GGGCAATCCTGAGCCAAATCC---TTTATT-----------CTTTTATT-------------CTAAAAAA---CTAAGGA---------TAGGTGCAGAGACTCAACGGAAGCTTTTCT--AACAAAGG-------CAAAA-AGAGCGTCT---------TT-TTAC--------AAA-----TTAGAGAATAAAGAGAGAGTCCTTTTCTACATGTCAAT---ATAGACAGCAATGAAATTTTTAAGT--AATAA-GAAAATCCGTGGATTTT-------AAAAATCGTGAGGGTTCAAGTCCCTCTATCCCCATAGGCTA-----CTAT------------GC------------------------ATTTGGTTTAGGA------AATTTGAAAAAACCCTTTCT-ATTTCTAATTTGTACTTCCCTTTTAGTTTATTGATTGCCTTTCCTTGTCC---------ATAAT-AAAATTAAATTT-------------------TAGATTAGGAAATC-GGTCGGGATAGCTCAGCCGGTAGAGCAGAGGACTGAAAATCCTCGTGTCACC--------- Cuscuta_tuberculata_763 ----------------TACGGACTTAATTGGATTGAGCCTTGGTATGGAAACTTAC-TAAGTGATCACTTTCAAATTCAGAGAAACCCTGGAAG-AAATAAATA----GGGCAATCCTGAGCCAAATCC---TTTATT-----------CTTTTATT-------------CTAAAAAA---CTAAGGA---------TAGGTGCAGAGACTCAACGGAAGCTTTTCT--AACAAAGG-------CAAAA-AGAGCGTCT---------TT-TTAC--------AAA-----TTAGAGAATAAAGAGAGAGTCCTTTTCTACATGTCAAT---ATAGACAGCAATGAAATTTTTAAGT--AATAA-GAAAATCCGTGGATTTT-------AAAAATCGTGAGGGTTCAAGTCCCTCTATCCCCATAGGCTA-----CTAT------------GC------------------------ATTTGGTTTAGGA------AATTTGAAAAAACCCTTTCT-ATTTCTAATTTGTACTTCCCTTTTAGTTTATTGATTGCCTTTCCTTGTCC---------ATAAT-AAAATTAAATTT-------------------TAGATTAGGAAATC-GGTCGGGATAGCTCAGCCGGTAGAGCAGAGGACTGAAAATCCTCGTGTCACC--------- Cuscuta_tuberculata_762 -----------------------------------------GGTATGGAAACTTAC-TAAGTGATCACTTTCAAATTCAGAGAAACCCTGGAAG-AAATAAATA----GGGCAATCCTGAGCCAAATCC---TTTATT-----------CTTTTATT-------------CTAAAAAA---CTAAGGA---------TAGGTGCAGAGACTCAACGGAAGCTTTTCT--AACAAAGG-------CAAAA-AGAGCGTCT---------TT-TTAC--------AAA-----TTAGAGAATAAAGAGAGAGTCCTTTTCTACATGTCAAT---ATAGACAGCAATGAAATTTTTAAGT--AATAA-GAAAATCCGTGGATTTT-------AAAAATCGTGAGGGTTCAAGTCCCTCTATCCCCATAGGCTA-----CTATATAG--------GC----------------TACTATGCATTTGGTTTAGGA------AATTTGAAAAAACCCTTTCT-ATTTCTAATTTGTACTTCCCTTTTAGTTTATTGATTGCCTTTCCTTGTCC---------ATAAT-AAAATTAAATTT-------------------TAGATTAGGAAATC-GGTCGGGATAGCTCAGCCGGTAGA------------------------------------- Cuscuta_tuberculata_737 ----------------TACGGACTTAATTGGATTGAGCCTTGGTATGGAAACTTAC-TAAGTGATCACTTTCAAATTCAGAGAAACCCTGGAAG-AAATAAATA----GGGCAATCCTGAGCCAAATCC---TTTATT-----------CTTTTATT-------------CTAAAAAA---CTAAGGA---------TAGGTGCAGAGACTCAACGGAAGCTTTTCT--AACAAAGG-------CAAAA-AGAGCGTCT---------TT-TTAC--------AAA-----TTAGAGAATAAAGAGAGAGTCCTTTTCTACATGTCAAT---ATAGACAGCAATGAAATTTTTAAGT--AATAA-GAAAATCCGTGGATTTT-------AAAAATCGTGAGGGTTCAAGTCCCTCTATCCCCATAGGCTA-----CTAT------------GC------------------------ATTTGGTTTAGGA------AATTTGAAAAAACCCTTTCT-ATTTCTAATTTGTACTTCCCTTTTAGTTTATTGATTGCCTTTCCTTGTCC---------ATAAT-AAAATTAAATTT-------------------TAGATTAGGAAATC-GGTCGGGATAGCTCAGCCGGTAGAGCAGAGGACTGAAAATCCTCGTGTCACC--------- Cuscuta_tuberculata_554 ----------------TACGGACTTAATTGGATTGAGCCTTGGTATGGAAACTTAC-TAAGTGATCACTTTCAAATTCAGAGAAACCCTGGAAG-AAATAAATA----GGGCAATCCTGAGCCAAATCC---TTTATT-----------CTTTTATT-------------CTAAAAAA---CTAAGGA---------TAGGTGCAGAGACTCAACGGAAGCTTTTCT--AACAAAGG-------CAAAA-AGAGCGTCT---------TT-TTAC--------AAA-----TTAGAGAATAAAGAGAGAGTCCTTTTCTACATGTCAAT---ATAGACAGCAATGAAATTTTTAAGT--AATAA-GAAAATCCGTGGATTTT-------AAAAATCGTGAGGGTTCAAGTCCCTCTATCCCCATAGGCTA-----CTAT------------GC------------------------ATTTGGTTTAGGA------AATTTGAAAAAACCCTTTCT-ATTTCTAATTTGTACTTCCCTTTTAGTTTATTGATTGCCTTTCCTTGTCC---------ATAAT-AAAATTAAATTT-------------------TAGATTAGGAAATC-GGTCGGGATAGCTCAGCCGGTAGAGCAGAGGACTGAAAATCCTCGTGTCACC--------- Cuscuta_tinctoria_574_766 ------------------CGGACTTAATTGGATTGAGCCTTGGTATGGAAACTTAC-TAAGTGATCACTTTCAAATTCAGAGAAACCCTGGAAT-GAAGACAAT----GGGCAATCCTGAGCCAAATCC---TTTTT---------------------------------CGAAAAAAA--CTAAGGA---------GAGGTGCAGAGACTCAACGGAAGCTTTTCT--AACCAATA-------CAAGA-AGGGAGTCT-----------------------------TA-TTAGAGAATAAAGAGAGAGTCCTTTTCTACATGTCAAT---ATGGACAGGAATGAAATTTT-CAGT--AAGAA-GAAAATCCGTCGATTTT-------AAAAATCATGAGGGTTCAAGTCCCTCTATCCCCAAAGAATT-------------ACTCTCT--GCTTGG---------------GGGAACAGCTTTTT-----------TTAACTTGCAATCCCCT----------------------------TTTCTTGTTCCTTCAATATTCAATATAAAATAGAATTG-ATAATTAGAATCTGCAA--------------TAGGAAAGGAAATA-AGTCGGGATAGCTCAGTCGGTAGAGCAGAGGACTGAA------------------------ Cuscuta_tinctoria_573 ------------------CGGACTTAATTGGATTGAGCCTTGGTATGGAAACTTAC-TAAGTGATCACTTTCAAATTCAGAGAAACCCTGGAAT-GAAGACAAT----GGGCAATCCTGAGCCAAATCC---TTTTT---------------------------------CGAAAAAAA--CTAAGGA---------GAGGTGCAGAGACTCAACGGAAGCTTTTCT--AACCAATA-------CAAGA-AGGGAGTCT-----------------------------TA-TTAGAGAATAAAGAGAGAGTCCTTTTCTACATGTCAAT---ATGGACAGGAATGAAATTTT-CAGT--AAGAA-GAAAATCCGTCGATTTT-------AAAAATCATGAGGGTTCAAGTCCCTCTATCCCCAAAGAATT-------------ACTCTCT--GCTTGG---------------GGGAACAGCTTTTT-----------TTAACTTGCAATCCCCT----------------------------TTTCTTGTTCCTTCAATATTCAATATAAAATAGAATTG-ATAATTAGAATCTGCAA--------------TAGGAAAGGAAATA-AGTCGGGATAGCTCAGTCGGTAGAGCAGAGGACTGAAAATCCTCGTG-------------- Cuscuta_tasmanica ------------------------------GATTGAGCCTTGGTATGGAAACTTAC-TAAGTGATCACTTTCAAATTCAGAGAAACCCTGGAAG-GAAGACAAT----GGGCAATCCTGAGCCAAATCC---TTTTA-----ATATTTTATAATTTTATAAAAAAT---TATAAAAAAA--CGAAGGA---------AAGGTGCAGAGACTCAACGGAAGCTTTTCT--AACCAATA-------CAAAA-AGGGAGTCTGATATATCTTT-TTACCAA------ATTGGA-TTAGAGAATAAAGAGAGAGTCCTTTTCTACATGTCAAT---ATGGACAGTAATGAAATTTT-CAGT--AAGAA-GAAAATCCGTTGATTTT-------AAAAATCGTGAGGGTTCAAGTCCCTCTATCCCTAAAGGCCT-----AACAAACTACTCTCT--GCTTGATGCATGGTTCAAATGGGGAACGTCTTTTT-----------TTAACTTACAATCCCCTT--------------------TTATCGGTTTCATTTCCCTTCAATA-------GACTTTATAATTAGATAATTAGAATC-------------------TTTAATAGGAAATA-GGTCGGGATAGCTCAGTTGGTAGAGCAGAGGACTGAA------------------------ Cuscuta_suksdorfii_635_636 ----------------------CTTAATTGGATTGAGCCTTGGTATGGAAACGTAC-TAAGTGATCACTTTCAAATTCAGAGAAACCCTGGAAT-TAATGAAAT----GGGCAATCCTGAGCCAAATCC---TTTTT------------ATAATCTT-------------ATAAAAAAA--CTAAGGA---------GAGGTGCAGAGACTCAACGGAAGCTTTTCT--AACAAATG-------TGAAA-ACAGAGTCTGCTACATCTTT-CTACC-------AGACTTA-TTAGAGAATAAAGAGAGAGTCCTTTTCTACATGTCAAT---ATGGACAGTAATGGAATTTT-CAGT--AAGAA-GAAAATCCGTTGATTTG-------AAAAATCGTGAGGGTTCAAGTCCCTCTATCCCCAAAAGCCT-----AAAAAATTATGCTCT-----------GCTTGGGAAAA--CGCCTTT---------------TTTTAAC----------------------------------TATTGATTTCAGTTTCCTTCAACA--------------TGATCT-AT-----------------------------CACAGTAGGAAATG-GGTCGGGATAGCTCAGTTGGTAGAGCAGAGGACTGAAAATCCTC----------------- Cuscuta_suksdorfii_470 ---------------------------------TGAGCCTTGGTATGGAAACGTAC-TAAGTGATCACTTTCAAATTCAGAGAAACCCTGGAAT-TAATGAAAT----GGGCAATCCTGAGCCAAATCC---TTTTT------------ATAATCTT-------------ATAAAAAAA--CTAAGGA---------GAGGTGCAGAGACTCAACGGAAGCTTTTCT--AACAAATG-------TGAAA-AAATAGTCTGCTACATCTTT-CTACC-------AGACTTA-TTAGAGAATAAAGAGAGAGTCCTTTTCTACATGTCAAT---ATGGACAGTAATGGAATTTT-CAGT--AAGAA-GAAAATCCGTTGATTTG-------AAAAATCGTGAGGGTTCAAGTCCCTCTATCCCCAAAAGCCT-----AACAAATTATGCTCT-----------GCTTGGGAAAA--CGCCTTT---------------TTTTAAC----------------------------------TATTGATTTCAGTTTCCTTCAACT--------------TGATCT-AT-----------------------------CACAGTAGGAAATG-GGTCGGGATAGCTCAGTTGGTAGAGCAGAGGACTGAAAATCCTCG---------------- Cuscuta_subinclusa_644 ------------------------------GATTGAGCCTTGGTATGGAAACGTAC-TAAGTGATCACTTTCAAATTCAGAGAAACCCTGGAAT-TAATGAAAA----GGGTAATCCTGAGCCAAATCC---TTTTT------------AGAATCTT-------------ATAAAAAA---CTAAGGA---------GAGGTGCAGAGACTCAACGGAAGTTTTTCT--AAAAAATG-------TGAAA-AAAGAGTCTGCTACATCTTT-CTACC-------AGACTTAATTAGAGAATAAAGAGAGAGTCCGTTTCTACATGTCAAT---ATGGACAGTAATGGAATTTT-CAGT--AAGAA-GAAAATCCGTTGGTTTT-------AAAAATCGTGAGGGTTCAAGTCCCTCTATCCCCAAAAGCCT-----AACAAATTATGTTCG-----------ACTTGGGAAA---CGCCTTT---------------TTTTAACACGCACTCCCTTT-------------------ATTATTGATTTCATTTTCCTTCAACA----------------------------TGATC-------------------TACAATGGAAAATG-GGTCGGGATAGCTCAGTCGGTAGAGCAGAGGACTGAAAATCCTCGTGTCACCAA------- Cuscuta_subinclusa_501 -----------GACGCTACGGACTTAATTGAATTGAGCCTTGGTATGGAAATGTAC-TAAGTGATCACTTTCAAATTCAGAGAAACCCTGGAAT-TAATGAAAA----GGGTAATCCTGAGCCAAATCC---TTTTT------------AGAATCTT-------------ATAAAAAAA--CTAAGGA---------GAGGTGCAGAGACTCAACGGAAGTTTTTCT--AAACAATG-------TGAAA-AAAGAGTCTG-----------CTACC-------AGACTTAATTAGAGAATAAAGAGAGAGTCCGTTTCTACATGTCAAT---ATCGACAGTAATGGAATTTT-CAGT--AAGAA-GAAAATCCGTTGGTTTT-------AAAAATCGTGAGGGTTCAAGTCCCTCTATCCCCAAAAGCCT-----AACAAATTATGTTCT-----------ACTTGGGAAA---CGCCTTT---------------TTTTAACACGCACTCCCTTT--------------------TTATTGATTTCATTTTCCTTCAACA-------------------------------TC-------------------TACAATGGAAAATG-GGTCGGGATAGCTCAGTCGGTAGAGCAGAGGACTGAAAATCCTCGTGTC------------ Cuscuta_subinclusa_197 ------------ACGCTACGGACTTAATTGGATTGAGCCTTGGTATGGAAACGTAC-TAAGTGATCACTTTCAAATTCAGAGAAACCCTGGAAT-TAATGAAAA----GGGTAATCCTGAGCCAAATCC---TTTTT------------AGAATCTT-------------ATAAAAAAA--CTAAGGA---------GAGGTGCAGAGACTCAACGGAAGTTTTTCT--AAACAATG-------TGAAA-AAAGAGTCTGCTACATCTTT-CTACC-------AGACTTAATTAGAGAATAAAGAGAGAGTCCGTTTCTACATGTCAAT---ATGGACAGTAATGGAATTTT-CAGT--AAGAA-GAAAATCCGTTGGTTTT-------AAAAATCGTGAGGGTTCAAGTCCCTCTATCCCCAAAAGCCT-----AACAAATTATG--------------------------------------------------------------------------------------------ATTGATTTCATTTTCCTTCAACA----------------------------TGATC-------------------TACAATGGAAAATG-GGTCGGGATAGCTCAGTCGGTAGAGCAGAGGACTGAAAATCCTC----------------- Cuscuta_suaveolens_996 ----------------------------------GAGCCTTGGTATGGAAACTTAC-TAAGTGATCACTTTCAAATTCAGAGAAACCCTGGAAT-TAATAAAAA----GGGTAATCCTGAGCCAAATCC---TTTTT------------ATAATTTTATAA--------TATAAAAAAA--CGAAGGA---------AAGGTGCAGAGACTCAACGGAAGCTTTTCT--AACCAATG-------TAGAA-AAAGAGTATGATATATCTTT-TTACC-------AAACTGATTTAGAGAATAAAGAGAGAGTCCGTTTCTACATGTCAAG---ATGGACAGTAATGAAATTTT-CAGT--AAGAA-GAAAATCCGTCGATTTG-------AAAAATCATGAGGGTTCAAGTCCCTCTATCCCCAAAAGCCT-----AACAAATTACGCTCT-----------GCTCGGTATTTT---------ATTTTGATT----CAAAAGGGAACCCCCCTTT---------TATCTTTTATA-GGTTTCATTTCCC------TTCAATA--------------AAATAT-AGAATTCGAATC-------------------TACAGTGGGAAATG-GGTTGGGATAGCTCAGTCGGTAGAGCAGAGGACTGAAAATCCTCGTGTCACCA-------- Cuscuta_suaveolens_791 ----------------------CTTAATTGGATTGAGCCTTGGTATGGAAACGTAC-TAAGTGATCACTTTCAAATTCAGAGAAACCCTGGAAT-TAATAAAAA----GGGTAATCCTGAGCCAAATCC---TTTTT------------ATAATTTTATAA--------TATAAAAAAA--CGAAGGA---------AAGGTGCAGAGACTCAACGGAAGCTTTTCT--AACCAATG-------TAGAA-AAAGAGTATGATATATCTTT-TTACC-------AAACTGATTTAGAGAATAAAGAGAGAGTCCGTTTCTACATGTCAAG---ATGGACAGTAATGAAATTTT-CAGT--AAGAA-GAAAATCCGTCGATTTG-------AAAAATCATGAGGGTTCAAGTCCCTCTATCCCCAAAAGCCT-----AACAAATTACGCTCT-----------GCTTGGTATTTT---------ATTTTGATT----CAAAAGGGAACCCCCCTTT----------------TATA-GGTTTCATTTCCC------TTCAATA--------------AAATAT-AGAATTTGAATC-------------------TACAGTGGGAAATG-GGTTGGGATAGCTCAGTCGGTAGAGCAGAGGACTGAAAATCCT------------------ Cuscuta_suaveolens_790 ----------------------------------GAGCCTTGGTATGGAAACTTAC-TAAGTGATCACTTTCAAATTCAGAGAAACCCTGGAAT-TAATAAAAA----GGGTAATCCTGAGCCAAATCC---TTTTT------------ATAATTTTATAA--------TATAAAAAAA--CGAAGGA---------AAGGTGCAGAGACTCAACGGAAGCTTTTCT--AACCAATG-------TAGAA-AAAGAGTATGATATATCTTT-TTACC-------AAACTGATTTAGAGAATAAAGAGAGAGTCCGTTTCTACATGTCAAG---ATGGACAGTAATGAAATTTT-CAGT--AAGAA-GAAAATCCGTCGATTTG-------AAAAATCATGAGGGTTCAAGTCCCTCTATCCCCAAAAGCCT-----AACAAATTACGCTCT-----------GCTCGGTATTTT---------ATTTTGATT----CAAAAGGGAACCCCCCTTT---------TATCTTTTATA-GGTTTCATTTCCC------TTCAATA--------------AAATAT-AGAATTCGAATC-------------------TACAGTGGGAAATG-GGTTGGGATAGCTCAGTCGGTAGAGCAGAGGACTGAAAATCCTCGTGTCACCA-------- Cuscuta_strobilacea -----------------------TTAATTTTATTGAGCCTTGGTATGGAAACTTAC-TAAGTGATCACTTTCAAATTCAGAGAAACCCTGGAAT-AAATACACG----GGGCAATCCTGAGCCAAATCC---TTTAGA-----------TTTTAT---------------ATAATAAG-------GGA---------TAGGTGCAGAGACTCAACGGAAGCTTTTCT--AACCAATG-------CA---------GTCTGATATATATTT-TTATCAA-----AACTTGA-TTTGAGAATAAAGAGAGAGTCCTTTTCTACATGTCAAT---ATGGACAGTAATGAAATTTT-TAGT--AAAAA-GAAAATCCGTTGATTTT-------GAAAATCGTGAGGGTTCAAGTCCCTCTATCCCCAAATGACT-----AACAAACTA--------------------------------------CTTGGTT----GAGATGGGAAACGCCTT--------------------------TTTTAATTGATTTCATTTCCCCTTTTACTTG----------------------------------------------TCCCTAATTTAAAC-AGTCGGGATAGCTCAGCCGGTAGAGCAGAGGACTGAAAATCCTCGTGTCACCA-------- Cuscuta_stenolepis_781 ---------------------ACTTAATTGGATTGAGCCTTGGTATGGAAACTTAC-TAAGTGATCACTTTCAAATTCAGAGAAACCCTGGAAT-TAATAAAAA----GGGCAATCCTGAGCCAAATCC---TTTTT------------AGAAT-----------------AAAAAAAA--CTAAGGA---------GAGGTGCAGAGACTCAACGGAAGCTTTTCT--AACCAATG-------TGAAA-----------ATATCTTTGTTTTGCC-------AAGCTGA-TTAAAGAATAAAGAGAGAGTCCGTTTCTACATGTCAAT---ATGGACAGTAATGAAATTTT-CAGT--AAGAA-GAAAATCCGTCGATTTG-------AAAAATCGTGAGGGTTCAAGTCCCTCTATCCCCAAAAGCCC-----AACAAACTACTGCCT-----------GCTTGGTACTTT-TGGCTCAAATTTT-----------TTAACGTGCACTCCCCTT---------------------TATTGGTTTCATTTCCCTTCAATC--------------TAATCT-ACAATGTGAATC-------------------TCGAGTGGGAAATG-GGTCGGGATAGCTCAGTCGGTAGAGCAGAGGACTGAAAATCCTCGTGTCACCA-------- Cuscuta_stenolepis_779 ---------------------ACTTAATTGGATTGAGCCTTGGTATGGAAACTTAC-TAAGTGATCACTTTCAAATTCAGAGAAACCCTGGAAT-TAATAAAAA----GGGCAATCCTGAGCCAAATCC---TTTTT------------AGAAT-----------------AAAAAAAA--CTAAGGA---------GAGGTGCAGAGACTCAACGGAAGCTTTTCT--AACCAATG-------TGAAA-----------ATATCTTTGTTTTGCC-------AAGCTGA-TTAAAGAATAAAGAGAGAGTCCGTTTCTACATGTCAAT---ATGGACAGTAATGAAATTTT-CAGT--AAGAA-GAAAATCCGTCGATTTG-------AAAAATCGTGAGGGTTCAAGTCCCTCTATCCCCAAAAGCCC-----AACAAACTACTGCCT-----------GCTTGGTACTTT-TGGCTCAAATTTT-----------TTAACGTGCACTCCCCTT---------------------TATTGGTTTCATTTCCCTTCAATC--------------TAATCT-ACAATGTGAATC-------------------TCGAGTGGGAAATG-GGTCGGGATAGCTCAGTCGGTAGAGCAGAGGACTGAAAATCCTCGTGTCACCA-------- Cuscuta_squamata -----------------------------------------GGTATGGAAACTTAC-TAAGTGATCACTTTCAAATTCAGAGAAACCCTGGAAT-TAATAGAAA----GGGCAATCCTGAGCCAAATCC---TTTTT------------ATAATTTT-------------ATAAAAAAC--TGAAGGA---------GAGGTGCAGAGACTCAACGGAAGCTTTTCT--AACCAACG-------CAAAA-T---------AAAGATCTTT-TTACCAA-----AAACTGA-TTAGAGAATAAAGAGAGAGTCCGTTTCTACATGTAAAC---ATGGACAGTAATGAAATTTT-CAGT--AGGAA-GAAAATCCGTCGATTTG-------AAAAATCGTGAGGGTTCAAGTCCCTCTATCCCCAAAACCCT-----CTGTTGGTACTTGGT---------TCAAATGGGAAA------TTGCCTTT-------------TTATCGTGCAATCCCCTTC-------------------TTATTGGTTTCATTTCTCTTCAATA--------------AAATTT-AGGATTAGAATC-------------------TATCGTGGGAAATG-GGTCGGGATA--------------------------------------------------- Cuscuta_sidarum_519_692_751 ----------------TACGGACTTAATTGGATTGAGCCTTGGTATGGAAACTTAC-TAAGTGATCACTTTCAAATTCAGAGAAACCCTGGAAT-AAAGAAAAG----GGGCAATCCTGAGCCAAATCCTTTTTTATTTT------------------------------ATAAAAAA---CTAAGGA---------TAGGTGCAGAGACTCAACGGAAGTTTTTCT--AACAAATG-------GAAAA-AATAGGTTG-ATAAATATTT-TTAA--------AAACTTA-TTTGAGAATAAAGAGAGAGTCCTTTTCTACATATCAAT---ACAGATACCAATGAAATTTT-CAGT--AAGAA-GAAAATCCGTGGATTTT-------AAAAATCGTGAGGGTTCAAGTCCCTCTATCCCCAAAGGTGT-----GACAAACTTATATTAAGCTCGCCCC-TTTTTTCAT-TTGGTTTCGAAAAAG---GCCTTTCAAAT-TTATACTCCCATTTT---------------------------AGTTTTTTCATTGCCT-----------------------CAAATTTAC-------------------------ATTAGGAAATGAAGTCGGGATAGCTCAGCCGGTAGAGCAGAGGACTGAAAATCCTCGTGTCAC---------- Cuscuta_sidarum_1005 ------------------------------GATTGAGCCTTGGTATGGAAACTTAC-TAAGTGATCACTTTCAAATTCAGAGAAACCCTGGAAT-AAAGAAAAG----GGGCAATCCTGAGCCAAATCCCTTTTT--------------ATAAA----------------ATAAAAAA---CTAAGGA---------TAGGTGCAGAGACTCAACGGAAGCTTTTCT--AACAAATG-------GAAAA-AATAGGTTG-ATAAATATTT-TTAA--------AAACTTA-TTTGAGAATAAAGAGAGAGTCCTTTTCTACATATCAAT---ACAGATACCAATGAAATTTT-CAGT--AAGAA-GAAAATCCGTGGATTTT-------AAAAATCGTGAGGGTTCAAGTCCCTCTATCCCCAAAGGTGT-----GACAAACTTATATTAAGCTCGCCCCCTTTTTTCAT-TTGGTTTCGAAAAAG---GCCTTTCAAAT-TTATACTCCCATTTT---------------------------AGTTTTTTCATTGCCT-----------------------AAAATTTAC-------------------------ATTAGGAACTGAAGTCGGGATAGCTCAGCCGGTAGAGCAGAGGACTGAAAATCCTCGTGTCACCA-------- Cuscuta_serruloba ----------TGACGCTACGGACTTAATTGGATTGAGCCTTGGTATGGAAACTTAT-TAAGTGATCACTTTCAAATTCAGAGAAACCCTGGAAT-AAAGAAAAG----GGGCAATCCTGNGCCAAATCC-TTTTTATATTTT-------ATTATTTT-------------ATAAAAAA---CTAAGGA---------TAGGTGCAGAGACTCAACGGAAGCTTTTCT--AACAAAT---------AAAA-AAAAGGTTG-ATAAATATTT-TTAC--------AAAGTTA-TTTGAGAATAAAGAGAGAGTCCTTTTCTACATATCAAT---ACAGATACCAATGAAATTTT-CAGT--AAGAA-GAAAATCCGTGGATTTG-------AAAAATCGTGAGGGTTCAAGTCCCTCTATCCCCAAAGGTGT-----GACAAACTGCTATTACGCTCGCCCCCTTTTTTCAT-TTTGTTAG-GAATTC-------TTCAAATTCGAAAAAGGCCTTTC-----------------GTCCCCTTTTAGTTTTTTCATTGCCT-----------------------AAAATTTAC-------------------------ATTAGGAAATGAAGTCGGGATAGCTCAGCCGGTAGAGCAGAGGACTGAAAATCCTCGTGTCACCA-------- Cuscuta_sandwichiana_748 -----------GACGCTACGGACTTAATTAGATTGAGCCTTGGTATGGAAACTTAC-TAAGTGATGACTTTCAAATTCAGAGAAACCCTGGAAT-TAATAAAAAA--GGGGCAATCCTGAGCCAAATCC---TTTTT------------AGAAA-----------------TAAAAAAA--GTAAGGA---------AAGGTGCAGAGACTCAACGGAAGCTTTTCT--AACCAATG-------TGAAA-----------ATATATTTTT-TTACC-------AAGCTGA-TTAAAGAATAAAGAGAGAGTCCGTTTCTACATGTCAAT---ATGGACAGTAATGAAATTTT-CAGT--AATAAAGAAAATCCGTCGATTTG-------AAAAATCGTGAGGGTTCAAGTCCCTCTATCCCCAAAAGCCC-----AACAAACTACTCTCT-----------GCTTAGTACTTT-TGGCTCAAATTTT-----------TTAACGTGCACTACCCTT---------------------TATTGGTTTCATTTCCCTTCAATC--------------TAATCT-ACAATTTGAATC-------------------TCCAGTGGGAAATG-GGTCGGGATAGCTCAGTCGGTAGAGCAGAGGACTGAAAATCCTCGTGTCACCA-------- Cuscuta_sandwichiana_686 -----------GACGCTACGGACTTAATTGGATTGAGCCTTGGTATGGAAACTTAC-TAAGTGATGACTTTCAAATTCAGAGAAACCCTGGAAT-TAATAAAAAA--GGGGCAATCCTGAGCCAAATCC---TTTTT------------AGAAA-----------------TAAAAAAA--GTAAGGA---------AAGGTGCAGAGACTCAACGGAAGCTTTTCT--AACCAATG-------TGAAA-----------ATATATTTTT-TTACC-------AAGCTGA-TTAAAGAATAAAGAGAGAGTCCGTTTCTACATGTCAAT---ATGGACAGTAATGAAATTTT-CAGT--AATAAAGAAAATCCGTCGATTTG-------AAAAATCGTGAGGGTTCAAGTCCCTCTATCCCCAAAAGCCC-----AACAAACTACTCTCT-----------GCTTAGTACTTT-TGGCTCAAATTTT-----------TTAACGTGCACTACCCTT---------------------TATTGGTTTCATTTCCCTTCAATC--------------TAATCT-ACAATTTGAATC-------------------TCCAGTGGGAAATG-GGTCGGGATAGCTCAGTCGGTAGAGCAGAGGACTGAAAATCCTC----------------- Cuscuta_sandwichiana_155 CGAAATTGGTAGACGCTACGGACTTAATTGGATTGAGCCTTGGTATGGAAACTTAC-TAAGTGATGACTTTCAAATTCAGAGAAACCCTGGAAT-TAATAAAAAA--GGGGCAATCCTGAGCCAAATCC---TTTTT------------AGAAA-----------------TAAAAAAA--GTAAGGA---------AAGGTGCAGAGACTCAACGGAAGCTTTTCT--AACCAATG-------TGAAA-----------ATATATTTTT-TTACC-------AAGCTGA-TTAAAGAATAAAGAGAGAGTCCGTTTCTACATGTCGAT---ATGGACAGTAATGAAATTTT-CAGT--AATAAAGAAAATCCGTCGATTTG-------AAAAATCGTGAGGGTTCAAGTCCCTCTATCCCCAAAAGCCC-----AACAAACTACTCTCT-----------GCTTAGTACTTT-TGGCTCAAATTTT-----------TTAACGTGCACTACCCTT---------------------TATTGGTTTCATTTCCCTTCAATC--------------TAATCT-ACAATTTGAATC-------------------TCCAGTGGGAAATG-GGTCGGGATAGCTCAGTCGGTAGAGCAGAGGACTGAAAATCCTCGTGTCACCAGTTCAAAT Cuscuta_salina_salina_652_653 ------------------------------GATTGAGCCTTGGTATGGAAACGTAC-TAAGTGATCACTTTCAAATTCAGAGAAACCCTGGAAT-TAATTAAAT----GGGCAATCCTGAGCCAAATCC---TTTTT------------ATAATCTT-------------CTAAAAAAA--CTAAGGA---------GAGGTGCAGAGACTCAACGGAAGCTTTTCT--AACAAATG-------TCAAA-AAAGAGTCTGCTACATCTTT-CTACC-------AGACTTA-TTAGAGAATAAAGAGAGAGTCCTTTTCTACATGTCAAT---ATGGACAGTAATGGAATTTT-CAGT--AAGAA-GAAAATCCGTTGATTTG-------AAAAATCGTGAGGGTTCAAGTCCCTCTATCCCCAAAAGCCT-----AACAAATTATGCTCT-----------GCTTGGGAAAA--------------------------TTAAC----------------------------------TATTTATTTTAGTTTC----------------------AGATCT-AT-----------------------------CACAGTAGGAAATG-GGTCGGGATAGCTCAGTTGGTAGAGCAGAGGACTGAAAATCCTCGTGTC------------ Cuscuta_salina_salina_477_478_641 --------------------GACTTAATTGGATTGAGCCTTGGTATGGAAACGTAC-TAAGTGATCACTTTCAAATTCAGAGAAACCCTGGAAT-TAATTAAAT----GGGCAATCCTGAGCCAAATCC---TTTTT------------ATAATCTT-------------ATAAAAAAA--CTAAGGA---------GAGGTGCAGAGACTCAACGGAAGCTTTTCT--AACAAATG-------TGAAA-AAAGAGTCTGCTACATCTTT-CTACC-------AGACTTA-TTAGAGAATAAAGAGAGAGTCCTTTTCTACATGTCAAT---ATGGACAGTAATGGAATTTT-CAGT--AAGAA-GAAAATCCGTTGATTTG-------AAAAATCGTGAGGGTTCAAGTCCCTCTATCCCCAAAAGCCT-----AACAAATTATGCTCT-----------GCTTGGGAAAA--CGCCTTT---------------TTTTAAC----------------------------------TATTTATTTTAGTTTC----------------------AGATCT-AT-----------------------------CACAGTAGGAAATG-GGTCGGGATAGCTCAGTTGGTAGAGCAGAGGACTGAAAATCCTCG---------------- Cuscuta_salina_major -------------------GGACTTAATTGGATTGAGCCTTGGTATGGAAACGTAC-TAAGTGATCACTTTCAAATTCAGAGAAACCCTGGAAT-TAATGAAAT----GGGCAATCCTGAGCCAAATCC---TTTTT------------ATAATCTT-------------ATAAAAAAA--CTAAGGA---------GAGGTGCAGAGACTCAACGGAAGCTTTTCT--AACAAATG-------TGAAA-AAAGAGTCTGCTACATCTTT-CTACC-------AGACTTA-TTAGAGAATAAAGAGAGAGTCCTTTTCTACATGTCAAT---ATGGACAGTAATGGAATTTT-CAGT--AAGAA-GAAAATCCGTTGATTTG-------AAAAATCGTGAGGGTTCAAGTCCCTCTATCCCCAAAAGCCT-----AACAAATTATGCTCT-----------GCTTGGGAAAA--CACCTTT---------------TTTTAAC----------------------------------TATTGATTTCAGTTTC----------------------AGATCT-AT-----------------------------CACAGTAGGAAATG-GGTCGGGATAGCTCAGTTGGTAGAGCAGAGGACTGAAAATCCTCGTGTCACCAG------- Cuscuta_runyonii ------------------------TAATTGGATTGAGCCTTGGTATGGAAACTTAC-TAAGTGATCACTTTCAAATTCAGAGAAACCCTGGAAT-TAATAAAAA----GGGCAATCCTGAGCCAAATCC---TTTTT------------AGAAT-----------------AAAAAAAA--CTAAGGA---------AAGGTGCAGAGACTCAACGGAAGCTTTTCT--AACCAATG-------TGAAA-----------ATATATTTTT-TTACC-------AAGCTGA-TTAAAGAATAAAGAGAGAGTCCGTTTCTACATGTCAAT---ATGGACAGTAATGAAATTTT-CAGT--AAGAA-GAAAATCCGTCGATTTG-------AAAAATTGTGAGGGTTCAAGTCCCTCTATCCCCAAAAGCCC-----AACAAACTACTCTCT-----------GCTTGGTACTTT-TGTC--------------------TCAACGTGCACTCCCCTT---------------------TATTGGTTTCATTTCCCTTCAATC--------------TAATCT-CGAATTTGAATC-------------------TACAGTGGGAAATG-GGTCGGGATAGCTCAGGCGGTAGAGCAGAGGACTGAAAATCCTCGTGTCACC--------- Cuscuta_rugosiceps_745 ---------------------------------TGAGCCTTGGTATGGAAACTTAC-TAAGTGATCACTTTCAAATTCAGAGAAACCCTGGAAT-GAAGACAAT----GGGCAATCCTGAGCCAAATCC---TTTTT------------ATTTTTTT-------------ATAAAAAAA--CTAAGGA---------AAGGTGCAGAGACTCAACGGAAGCTTTTCT--AACCAATA-------CAAAA-AGAAAATCTCATAGATCTTT-TTACCGA-------ACTCA-TTAGAGAATAAAGAGAGAGTCCTTTTCTACATGTCAAT---ATGGACAGTAATGAAATTTT-CAGT--AAGAA-GAAAATCCGTTGATTTT-------AAAAATCGTGAGGGTTCAAGTCCCTCTATCCCCAAGGGCCT-----AACAAA------------CTTGGTGCATGGTTCAAATGAGGAACGT--------------------ACTTGCAATCCCCTT--------------------TTATTGGTTTCATTTTCCTTCAATA--------------TAATTT-CTAATTAGAATC-------------------TGCAATAGGAAATA-GGTCGGGATAGCTCAGTCGGTAGAGCAGAGGACTGAAAATCCTC----------------- Cuscuta_rugosiceps_517_915 ----------------------CTTAATTGGATTGAGCCTTGGTATGGAAACTTAC-TAAGTGATCACTTTCAAATTCAGAGAAACCCTGGAAT-GAAGACAAT----GGGCAATCCTGAGCCAAATCC---TTTTT------------ATTTTTTT-------------ATAAAAAAA--CTAAGGA---------AAGGTGCAGAGACTCAACGGAAGCTTTTCT--AACCAATA-------CAAAA-AGAAAATCTCATAGATCTTT-TTACCGA-------ACTCA-TTAGAGAATAAAGAGAGAGTCCTTTTCTACATGTCAAT---ATGGACAGTAATGAAATTTT-CAGT--AAGAA-GAAAATCCGTTGATTTT-------AAAAATCGTGAGGGTTCAAGTCCCTCTATCCCCAAGGGCCT-----AACAAA------------CTTGGTGCATGGTTCAAATGAGGAACGT--------------------ACTTGCAATCCCCTT--------------------TTATTGGTTTCATTTTCCTTCAATA--------------TAATTT-CTAATTAGAATC-------------------TGCAATAGGAAATA-GGTCGGGATAGCTCAGTCGGTAGAGCAGAGGACTGAAAATCCT------------------ Cuscuta_rostrata --------------------GACTTAATTGGATTGAGCCTTGGTATGGAAACTTAC-TAAGTGATAACTTTCAAATTCAGAGAAACCCTGGAAT-TAATAGAAA----GGGCAATCCTGAGCCAAATCC---TTTTT------------ATAATTTT-------------ATAAAAAAC--TTAAGGA---------GAGGTGCAGAGACTCAACGGAAGCTTTTCT--AACCAACG-------CAAAA-T---------CAAGATCTTT-TTACCAA-----AAACTGA-TTAGAGAATAAAGAGAGAGTCCGTTTCTACATGTAAAC---ATGGACAGTAATGAAATTTT-CAGT--AGGAA-GAAAATCCGTCGATTTG-------AAAAATCGTGAGGGTTCAAGTCCCTCTATCCCCAAAAACCT-----CTGTTGGTACTTGGT---------TCAAATGGGAAA------TTGCCTTT-------------TTAGCGTGCAATCCCCTTC-------------------TTATTGGTTTCATTTCTCTTCAATA--------------AAATTT-AGGATTAGAATC-------------------TATAGGGGGAAATG-GGTCGGGATAGCTCAGTCGGTAGAGCAGAGGACTG-------------------------- Cuscuta_racemosa_miniata -----------------------TTAATTGGATTGAGCCTTGGTATGGAAACTTAC-TAAGTGATCACTTTCAAATTCAGAGAAACCCTGGAAT-TAATAAAAA----GGGCAATCCTGAGCCAAATCC---TTGTT------------AGA------------------ATAAAAAAA--AAAAGGA---------AAGGTGCAGAGACTCAACGGAAGCTTTTCT--AACCAATG-------TAAAAAAAAGAATCTGATCTATCTTT-TTACC-------AAACTGA-TTAGAGAATAAAGAGAGAGTCCGTTTCTACATGTCAAT---ATGGACAGTAATGAAATTTT-CAGT--AAGAA-GAAAATCCGTTGATTTG-------AAAAATCGTGAGGGTTCAAGTCCCTCTATCCCCAAAAGCCT-----AACAAATTACGCTCT-----------GCTTGGTACTTT------------TTGGTT----CAAATGGGAACCGCCTTTTTTGAATTTACACTCCCCTTT---TA--------------------------------------------------------------------------------------TG-GGTCGGGATAGCTCAGTCGGTAGAGCAGAGGACTGAAAATCCTCGTGTCACC--------- Cuscuta_racemosa ----------------TACGGACTTAATTGGATTGAGCCTTGGTATGGAAACTTAC-TAAGTGATCACTTTCAAATTCAGAGAAACCCTGGAAT-TAATAAAAA----GGGCAATCCTGAGCCAAATCC---TTGTT------------AGAATTTT-------------ATAAAAAAA--ATAAGGA---------AAGGTGCAGAGACTCAACGGAAGCTTTTCT--AACCAATG-------TAAAA-AAAGAGTTTGATATATCTTT-TTACC-------AAACTCA-TTAGAGAATAAAGAGAGAGTCCGTTTCTATATGTTAAT---ATGGACGATAATGAAATTTT-CAGT--AAGAA-GAAAATCCGTTGATTTG-------AAAAATCGTGAGGGTTCAAGTCCCTCTATCCCCAAAAGCCT-----AACAAATTACGCTCT-----------GCTTGGT----------------------T----CAAATCGGAACCGCCTTTTTTTAATGTAC-------------TA--------------------------------------------------------------------------------------TG-GGTCGGGATAGCTCAGTTGGTAGAGCAGAGGACTGAAAATCCTCGTGTCACCAATTAAGTC Cuscuta_purpusii_928 ----------------TACGGACTTAATTGGATTGAGCCTTGGTATGGAAACTTAC-TAAGTGATCACTTTCAAATTCAGAGAAACCCTGGAAT-GAAGACAAT----GGGCAATCCTGAGCCAAATCC---TTTTT---------------------------------ATAAAAAAA--CTAAGGA----GAGGAGAGGTGCAGAGACTCAACGGAAGCTTTTCT--AACCAATA-------CAAGA-AGGGAGTCTGATATATCTTT-TTCCCAA-------ACTAA-TTAGAGAATAAAGAGAGAGTCCTTTTCTACATGTCAAT---ATGGACAGTAATGAAATTTT-CAGT--AAGAA-GAAAATCCGTCGATTTT-------AAAAATCATGAGGGTTCAAGTCCCTCTATCCCCAAAGGCCT-----CAAAAAATACTCTCT--GCTTGGTGCGTGGTTCAAATGGGAAACATCTTTTT-----------TTAACTTGCAATCCCCT--------------------TTTATTGGTTTCATTTTCCTTCAATA--------------TAATTT-------------------------------------------ATA-GGTCGGGATAGCTCAGTTGGTAGAGCAGAGGACTGAAAATCCTCGTG-------------- Cuscuta_purpusii_898_1013_1025 ------------------------------GATTGAGCCTTGGTATGGAAACTTAC-TAAGTGATCACTTTCAAATTCAGAGAAACCCTGGAAT-GAAGACAAT----GGGCAATCCTGAGCCAAATCC---TTTTT---------------------------------ATAAAAAAA--CTAAGGA----GAGGAGAGGTGCAGAGACTCAACGGAAGCTTTTCT--AACCAATA-------CAAGA-AGGGAGTCTGATATATCTTT-TTCCCAA-------ACTAA-TTAGAGAATAAAGAGAGAGTCCTTTTCTACATGTCAAT---ATGGACAGTAATGAAATTTT-CAGT--AAGAA-GAAAATCCGTCGATTTT-------AAAAATCATGAGGGTTCAAGTCCCTCTATCCCCAAAGGCCT-----CAAAAAATACTCTCT--GCTTGGTGCGTGGTTCAAATGGGAAACATCTTTTT-----------TTAACTTGCAATCCCCT--------------------TTTATTGGTTTCATTTTCCTTCAATA--------TAATTTTAATTT-------------------------------------------ATA-GGTCGGGATAGCTCANTTGGTAGAGCAGAGGACTGAAAAT--------------------- Cuscuta_prismatica -------------------GGACTTAATTGGATTGAGCCNTGGTATGGAAACTTAC-TAAGTGATCACTTTCAAATTCAGAGAAACCCTGGAAT-AAATACAAG----GGGCAATCCTGAGCCAAATCT---TTTTTT---------------TTTT-------------ATAAAAAAAA-CTAAGGATAAGGAGGATAGGTGCAGAGACTCAACGGAAGCTTTTCT--AACCAATG-------TAAAA-AGAGAGTCTGATAGATCTTT-TTATTATTAT--AAACTGA-TTAGAGAATAAAGAGAGAGTCCTTTTTTACATGTCAATT--ATGGACAGTAATGAAATTTT-GAGT--AAGAA-GAAAATCCGTTGATTTG-------AAAAATCGTGAGGGTTCAAGTCCCTCTATCCCCAAACGCCT-----AAAAAACTCCTATC--ATGCTCTCCGCTTTTT------------------------------------------TTAATTTGCAATCCCC--TTATTAGTTTCATTTGCCTTCCTTGTCCCTAATC----------------------TAATTCGAAGC-------------------TACAGT------------CGGGATAGCTCAGCCGGTAGAGCAGAGGACTGAAAATCCTCGTG-------------- Cuscuta_potosina_globifera ----------------------CTTAATTGGATTGAGCCTTGGTATGGAAACTTAC-TAAGTGATCACTTTCAAATTCAGAGAAACCCTGGAAT-GAATACAAA----GGGCAATCCTGAGCCAAATCC---TTCTT------------ATACTCTT-------------ATAAAAAAA--CTAAGGA---------GAGGTGCAGAGACTCAACGGAAGCTTTTCT--AACCAATG-------CAAAA-AGAGAGTCTGATAGATCTTT-TTCCC-------AAACTGA-TTAGAGAATAAAGAGAGAGTCCTTTTCTACATGTCACT---ATGGACAGTAATGAAATTTT-CAGT--AAGAA-GAAAATCCGTCGATTTG-------AAAAATCATGAGGGTTCAAGTCCCTCTATCCCCAAACGCCT-----AAAAAATTGCTCTCT---CTATTTTTTTTTTT-CAT-TTGGTTGGTGATCGGTTT------AAATGGGAAACGTCCCTTTTTAACTTGCAATTTCC-GGTTTCATTTTCTTTGCTTGTCCCTAATC--------------TAATTT-AGAATTAAAATATAAAATA------------TGCAATAGGAGATG-GGTCGGGATAGCTCAGTGGGTA--------------------------------------- Cuscuta_potosina_845 ----------------------CTTAATTGGATTGAGCCTTGGTATGGAAACTTAC-TAAGTGATCACTTTCAAATTCAGAGAAACCCTGGAAT-GAATACAAA----GGGCAATCCTGAGCCAAATCC---TTCTT------------ATACTCTT-------------ATAAAAAAA--CTAAGGA---------GAGGTGCAGAGACTCAACGGAAGCTTTTCT--AACCAATG-------CAAAA-AGAGAGTCTGATAGATCTTT-TTACC-------AAACTGA-TTAGAGAATAAAGAGAGAGTCCTTTTCTACATGTCAAT---ATGGACAGTAATGAAATTTT-CAGT--AAGAA-GAAAATCCGTCGATTTG-------AAAAATCATGAGGGTTCAAGTCCCTCTATCCCCAAACGCCT-----AAAAAATTGCTCTCT---CTATTTTTTTTTTT-CAT-TTGGTTGGTGATCGGTTT------AAATGGGAAACGTCCCTTTTTAACTTGCAATTTCC-GGTTTCATTTCCTTTGCTTGTCCCTAATC--------------TAATTT-AAAATTAAAATCTAAAATA------------TGCAATAGGAGATG-GGTCGGGATAGCTCATTGGGTAAAGCAAAGGACTGAAAATCCT------------------ Cuscuta_potosina_592 ----------------TACGGACTTAATTGGATTGAGCCTTGGTATGGAAACTTAC-TAAGTGATCACTTTCAAATTCAGAGAAACCCTGGAAT-GAATACAAA----GGGCAATCCTGAGCCAAATCC---TTCTT------------ATACTCTT-------------ATAAAAAAA--CTAAGGA---------GAGGTGCAGAGACTCAACGGAAGCTTTTCT--AACCAATG-------CAAAA-AGAGAGTCTGATAGATCTTT-TTCCC-------AAACTGA-TTAGAGAATAAAGAGAGAGTCCTTTTCTACATGTCACT---ATGGACAGTAATGAAATTTT-CAGT--AAGAA-GAAAATCCGTCGATTTG-------AAAAATCATGAGGGTTCAAGTCCCTCTATCCCCAAACGCCT-----AAAAAATTGCTCTCT---CTATTTTTTTTTTT-CAT-TTGGTTGGTGATCGGTTT------AAATGGGAAACGTCCCTTTTTAACTTGCAATTTCC-GGTTTCATTTTCTTTGCTTGTCCCTAATC--------------TAATTT-AGAATTAAAATATAAAATA------------TGCAATAGGAGATG-GGTCGGGATAGCTCAGTGGGTAGAGCAGAGGACTGAAAATCCTCGTGT------------- Cuscuta_polygonorum ----------------------CTTAATTGGATTGAGCCTTGGTATGGAAACTTAC-TAAGTGATCACTTTCAAATTCAGAGAAACCCTGGAAT-TAATAAAAA----GGGCAATCCTGAGCCAAATCC---TTTTT------------AGAAT----------------AAAAAAAAA--CTAAGGA---------AAGGTGCAGAGACTCAACGGAAGCTTTTCT--AACCAATG-------TGAAA-----------ATATATTTTT-TTACC-------AAGCTGA-TTAAAGAATAAAGAGAGAGTCCGTTTCTACATGTCAAT---ATGGACAGTAATGAAATTTT-CAGT--AAGAA-GAAAATCCGTCGATTTG-------AAAAATTGTGAGGGTTCAAGTCCCTCTATCCCCAAAAGCCC-----AACAAACTACTCTCT-----------GCTTGGTACTTT-TGGC--------------------TCAACGTGCACTCCCCTT---------------------TATTGGTTTCATTTCCGTTCAATC--------------TAATCT-CGAATTTGAATC-------------------TACAGTGGGAAATG-GGTCGGGATAGCTCAGGCGGTAGAGCAGAGGACTGAAAATCCTC----------------- Cuscuta_polyanthemos ------------------------------GATTGAGCCTTAGTATGGAAACTTAC-TAAGTGATCACTTTCAAATTCAGAGAAACCCTGGAAC-AAATAAATG----GGGCAATCCTGAGCCAAATCC---TTTATT-----------CTTTTATT-------------CTAAAAAA---CTACGGA---------TAGGTGCAGAGACTCGACGGAAGCTTTTCT--AACAAAGG-------CAAAA-AGAGCGTCT---------TT-TTAA--------AAA-----TTAGAGAATAAAGAGAGAGTCCTTTTCTACATGTCAAT---ATAGACAGCAATGAAATTTT-AAGT--AATAA-GAAAATCCGTGGATTTT-------AAAAATCGTGAGGGTTCAAGTCCCTCTATCCCCATAGGCTG-----ATATGCCTGTATTT-AGA---------------------------------------AAATTTGAAAAAAAAAACCTTTCT-------AATTTGTACTTCCCTTTTAGTTTATTTATTGCCTTTCCTTGTCC---------ATAATAAAATTAAAATTTGATTAAAATTTTAAATTTTAGGATTATGAAATC-GGTCGGGATAGCTCAGCCGGTAGAGCAGAGGACTGAAAATCCTCGTGTCAC---------- Cuscuta_platyloba ------------------CGGACTTAATTGGATTGAGCCTTGGTATGGAAACTTAC-TAAGTGATCACTTTCAAATTCAGAGAAACCCTGGAAT-TAATAAAAA----GGGCAATCCTGAGCCAAATCT---TTGTT-------------TTTTTTT-------------ATAAAAAAA--CTAAGGA---------AAGGTGCAGAGACTCAACGGGAGCTTTTCT--AACCAATT-------TAAAA-AAAGAGTCTGATATATCTTT-TTACC-------AAACTGA-TTAGAGAATAAAGAGAGAGTCCGTTTCTACATGTCGAN---NTGGACAGTAATGAAATTTT-CAGT--AAGAA-GAAAATCCGTTGATTTT-------AAAAATCGTGAGGGTTCAAGTCCCTCTATCCCCA--------------CAAATTAGGCTCT-----------GCTTGGTACTTT--------------GGTT----CAAAAGGGAACCGCCTTTT----------ACTCCCCTTT---TA--------------------------------------------------------------------------------------TG-GGTCGGGATAGCTCAGTCGGTAGAGCAGAGGACTGAAAATCCTCGTGTCACCA-------- Cuscuta_plattensis ----------------TACGGACTTAATTGGATTGAGCCTTGGTATGGAAACTTAC-TAAGTGATCACTTTCAAATTCAGAGAAACCCTGGAAT-TAATAAAAA----GGGCAATCCTGAGCCAAATCC---TTTTT------------AGAAT----------------AAAAAAAAA--CTAAGGA---------AAGGTGCAGAGACTCAACGGAAGCTTTTCT--AACCAATG-------TGAAA-----------ATATATTTTT-TTACC-------AAGCTGA-TTAAAGAATAAAGAGAGAGTCCGTTTCTACATGTCAAT---ATGGACAGTAATGAAATTTT-CAGT--AAGAA-GAAAATCCGTCGATTTG-------AAAAATTGTGAGGGTTCAAGTCCCTCTATCCCCAAAAGCCC-----AACAAACTACTCTCT-----------GCTTGGTACTTT-TGGT--------------------TCAACGTGCACTCCCCTT---------------------TATTGGTTTCAGTTCCTTTCAATC--------------TAATCT-CGAATTTGAATC-------------------TACAGTGGGAAATG-GGTCGGGATAGCTCAGGCGGTAGAGCAGAGGACTGAAAATCCTCGTGTCACCAA------- Cuscuta_pentagona_667 --------------------------------------------------ACTTAC-TAAGTGAGCACTTTCAAATTCAGAGAAACCCTGGAAT-TAATAAAAA----AGGCAATCCTGAGCCAAATCC---TTTTT------------AGAAT-------------------AAAAAA--CTAAGGA---------GAGGTGCAGAGACTCAACGGAAGCTTTTCT--AACCAATG-------TGAAA-----------ATATATTTTT-TTACC-------AAGCTGA-TTAAAGAATAAAGAGAGAGTCCGTTTCTACATGTCAAT---ATGGACAGTAATGAAATTTT-CAGT--AAGAA-GAAAATCCGTCGATTTG-------AAAAATCGTGAGGGTTCAAGTCCCTCTATCCCCAAAAGCCC-----AACAAACTACTCTCT-----------GCTTGGTACTTTATGGCTCAAATTTT-----------TTAACGTGCACTCC-------------------------------TTTCATTTCCCTTCAATC--------------TAATCT-ACAATTTGAATC-------------------TCCAGTGGGAAATG-GGTCGGGATA--------------------------------------------------- Cuscuta_pentagona_468 ---------------------ACTTAATTGGATTGAGCCTTGGTATGGAAACTTAC-TAAGTGAGCACTTTCAAATTCAGAGAAACCCTGGAAT-TAATAAAAA----AGGCAATCCTGAGCCAAATCC---TTTTT------------AGAAT-------------------AAAAAA--CTAAGGA---------GAGGTGCAGAGACTCAACGGAAGCTTTTCT--AACCAATG-------TGAAA-----------ATATATTTTT-TTACC-------AAGCTGA-TTAAAGAATAAAGAGAGAGTCCGTTTCTACATGTCAAT---ATGGACAGTAATGAAATTTT-CAGT--AAGAA-GAAAATCCGTCGATTTG-------AAAAATCGTGAGGGTTCAAGTCCCTCTATCCCCAAAAGCCC-----AACAAACTACTCTCT-----------GCTTGGTACTTTATGGCTCAAATTTT-----------TTAACGTGCACTCC-------------------------------TTTCATTTCCCTTCAATC--------------TAATCT-ACAATTTGAATC-------------------TCCAGTGGGAAATG-GGTCGGGATAGCTCAGTCGGTAGAGCAGAGGACTGAAAATC-------------------- Cuscuta_pentagona_464 ----------------------CTTAATTGGATTGAGCCTTGGTATGGAAACTTAC-TAAGTGAGCACTTTCAAATTCAGAGAAACCCTGGAAT-TAATAAAAA----AGGCAATCCTGAGCCAAATCC---TTTTT------------AGAAT-------------------AAAAAA--CTAAGGA---------GAGGTGCAGAGACTCAACGGAAGCTTTTCT--AACCAATG-------TGAAA-----------ATATATTTTT-TTACC-------AAGCTGA-TTAAAGAATAAAGAGAGAGTCCGTTTCTACATGTCAAT---ATGGACAGTAATGAAATTTT-CAGT--AAGAA-GAAAATCCGTCGATTTG-------AAAAATCGTGAGGGTTCAAGTCCCTCTATCCCCAAAAGCCC-----AACAAACTACTCTCT-----------GCTTGGTACTTTATGGCTCAAATTTT-----------TTAACGTGCACTCC-------------------------------TTTCATTTCCCTTCAATC--------------TAATCT-ACAATTTGAATC-------------------TCCAGTGGGAAATG-GGTCGGGATAGCTCAGTCGGTAGAGCAGAGGACTGAAAATCC------------------- Cuscuta_pentagona_456 -------------------GGACTTAATTGGATTGAGCCTTGGTATGGAAACTTAC-TAAGTGAGCACTTTCAAATTCAGAGAAACCCTGGAAT-TAATAAAAA----AGGCAATCCTGAGCCAAATCC---TTTTT------------AGAAT-------------------AAAAAA--CTAAGGA---------GAGGTGCAGAGACTCAACGGAAGCTTTTCT--AACCAATG-------TGAAA-----------ATATATTTTT-TTACC-------AAGCTGA-TTAAAGAATAAAGAGAGAGTCCGTTTCTACATGTCAAT---ATGGACAGTAATGAAATTTT-CAGT--AAGAA-GAAAATCCGTCGATTTG-------AAAAATCGTGAGGGTTCAAGTCCCTCTATCCCCAAAAGCCC-----AACAAACTACTCTCT-----------GCTTGGTACTTTATGGCTCAAATTTT-----------TTAACGTGCACTCC-------------------------------TTTCATTTCCCTTCAATC--------------TAATCT-ACAATTTGAATC-------------------TCCAGTGGGAAATG-GGTCGGGATAGCTCAGTCGGTAGAGCAGAGGACTGAAAATCC------------------- Cuscuta_parviflora_elongata ------------------------------GATTGAGCCTTGGTATGGAAACTTAC-TAAGTGATCACTTTCAAATTCAGAGAAACCCTGGAAT-TAATAAAAA----GGGCAATCCTGAGCCAACTCC---TTGTT------------AGAATTTT-------------ATAAAAAAA--ATAAGGA---------AAGGTGCAGAGACTCAACGGAAGCTTTTCT--AACCAATG-------TAAAA-AAAGAGTCTGATATATATTT-TTACC-------AAACTGA-TTAGAGAATAAAGAGAGAGTCCGTTTCTACATGTCAAT---ATGGACAGTAATGAAATTTT-CAGT--AAGAA-GAAAATCCGTTGATTTG-------AAAAATCGTGAGGGTTCAAGTCCCTCTATCCCCAAAAGCCT-----AACAAATTACGCTCT-----------GCTTGGTACTTT--------------GGTT----CAAATGGGAACCGCCTTTTTTTAATGT---------------TA--------------------------------------------------------------------------------------TG-GGTCGGGATAGCTCAGTCGGTAGAGCAGAGGACTGAA------------------------ Cuscuta_partita ------------------------------------------------------AC-AAAGTGATCACTATCAAATTCAGAGAAACCCTGGAAT-GAGTACAAA----GGGCAATCCTGAGCCAAATCC---TTTTTA------------GAATTTTATAAAAT------ATAAAAAA-----AAGGA---------GAGGTGCAGAGACTCAACGGAAGCTTTTCT--AACCAATG-------CAAAATAAAGAGTCTGATATATCTTTGTTACC-------AAACTGA-TTAGAGAATAAAGAGAGAGTCCTTTTCGACATGTCCAT---ATGGACAGTAATGAAATTTT-CAGT--AAGAA-GAAAATCCGTCGATTTA-------AAAAATCGTGAGGGTTCAAGTCCCTCTATCCCCAAAAGCCT--AAAAAAAAACTAC-----------TATCTGCTTGGTACTTGGTTCG------------------------ACTAGGAAACCCCTTA------------------TTATGGGTTTCATTTCCCTTC-------------------------ATAATTAGAATC-------------------TACAATAGGAAATG-GGTTGGGATAGCTCA---------------------------------------------- Cuscuta_odontolepis_730 ------------ACGCTACGGACTTAATTGGATTGAGCCTTGGTATGGAAACTTAC-TAAGTGATCACTTTCAAATTCAGAGAAACCCTGGAAC-AAATAAATG----GGGCAATCCTGAGCCAAATCC---TTTATT-----------CTTTTATT-------------CTAAAAAA---CTAAGGA---------TAGGTGCAGAGACTCAACGGAAGCTTTTCT--AACAAAGG-------CAAAA-AGAGCGTCT---------TT-TTAC--------AAA-----TTCGAGAATAAAGAGAGAGTCCTTTTCTACATGTCAAT---ATAGACAGCAATGAAATTTTTACGT--AATAA-GAAAATCCGTGGATTTG-------AAAAATCGTGAGGGTTCAAGTCCCTCTATCCCCATAGGCTA-----CTATGCCTTTAGTT-TGC------------------------ATTTGGTTTAGGA------AATTTGAAAAAACCCTTTCT-------AATTTGTACTTCCCTTTTACTTTATTGATTGCCTTTCCTTGTCC---------ATAAT-AAAATTTAATTT-------------------TCGATTAGGAAATC-GGTCGGGATAGCTCAGCCGGTAGAGCAGAGGACTGAAAATCCTCGTGTCACCAATT----- Cuscuta_odontolepis_587 ------------ACGCTACGGACTTAATTGGATTGAGCCTTGGTATGGAAACTTAC-TAAGTGATCACTTTCAAATTCAGAGAAACCCTGGAAC-AAATAAATG----GGGCAATCCTGAGCCAAATCC---TTTATT-----------CTTTTATT-------------CTAAAAAA---CTAAGGA---------TAGGTGCAGAGACTCAACGGAAGCTTTTCT--AACAAAGG-------CAAAA-AGAGCGTCT---------TT-TTAC--------AAA-----TTCGAGAATAAAGAGAGAGTCCTTTTCTACATGTCAAT---ATAGACAGCAATGAAATTTTTACGT--AATAA-GAAAATCCGTGGATTTG-------AAAAATCGTGAGGGTTCAAGTCCCTCTATCCCCATAGGCTA-----CTATGCCTTTAGTT-TGC------------------------ATTTGGTTTAGGA------AATTTGAAAAAACCCTTTCT-------AATTTGTACTTCCCTTTTACTTTATTGATTGCCTTTCCTTGTCC---------ATAAT-AAAATTTAATTT-------------------TCGATTAGGAAATC-GGTCGGGATAGCTCAGCCGGTAGAGCAGAGGACTGAAAATCCTCGTGTCACCAATT----- Cuscuta_occidentalis_californica ----------------------CTTAATTGGATTGAGCCTTGGTATGGAAACATACGTAAGTGAGCACTTTCAAATTCAGAGGAACCCTGGAAT-TAATGAAAT----GGGCAATCCTGAGCCAAATCC---TTTTT------------CGAATCTTATAAAAAA-----ATAAAAAAA--CGAAGGA---------GAGGTGCAGAGACTCAACGGAAGCTTTTCT--AACCTATA-------TGAAA-AAAGAGTCTGCTACATTTTT-ATACC-------AGACTTA-TGAGAGAATAAAGAGAGAGTCCGTTTTTACATGTCAAT---CTGGACAGTAATGGAATTTT-CAGT--AAGAA-GAAAATCCGTTGATTTG-------AAAAATCGTGAGGGTTCAAGTCCCTCTATCCCCAAAAGTCTACTTACACAAATTATGCTAT-----------ACTTGGGAAA---CGCCTTT----------------TTTAACATGCACTGCCCTT--------------------TTATTGATTTCATTTTCCTTAAACA--------------AGATCT-ATCATCCGAATC-------------------TACAAGGGGAAATG-GGTCGGGATAGCTCAGTCGGTAGAGCAGAGGACTGAAAATCCTCGTGTCACC--------- Cuscuta_occidentalis_504_647_648 -----------------------TTAATTGGATTGAGCCTTGGTATGGAAACATACGTAAGTGAGCACTTTCAAATTCAGAGGAACCCTGGAAT-TAATGAAAT----GGGCAATCCTGAGCCAAATCC---TTTTT------------CGAATCTTATAAAAAA-----ATAAAAAAA--CGAAGGA---------GAGGTGCAGAGACTCAACGGAAGCTTTTCT--AACCTATA-------TGAAA-AAAGAGTCTGCTACATTTTT-ATACC-------AGACTTA-TCAGAGAATAAAGAGAGAGTCCGTTTTTACATGTCAAT---CTGGACAGTAATGGAATTTT-CAGT--AAGAA-GAAAATCCGTTGATTTG-------AAAAATCGTGAGGGTTCAAGTCCCTCTATCCCCAAAAGTCTACTTACACAAATTATGCTCT-----------ACTTGGGAAA---CGCCTTT----------------TTTAACATGCACTGCCCTT--------------------TTATGGATTTCATTTTCCTTAAACA--------------AGATCT-ATCATCCGAATC-------------------TACAAGGGGAAATG-GGTCGGGATAGCTCAGTCGGTAGAGCAGAGGACTGAAAATCCTCGTGTCACC--------- Cuscuta_occidentalis_503 ------------------------------GATTGAGCCTTGGTATGGAAACATACGTAAGTGAGCACTTTCAAATTCAGAGGAACCCTGGAAT-TAATGAAAT----GGGCAATCCTGAGCCAAATCC---TTTTT------------CGAATCTTATAAAAAA-----ATAAAAAAA--CGAAGGA---------GAGGTGCAGAGACTCAACGGAAGCTTTTCT--AACCTATA-------AGAAA-AAAGAGTCTGCTACATTTTT-ATACC-------AGACTTA-TGAGAGAATAAAGAGAGAGTCCGTTTTTACATGTCAAT---CTGGACAGTAATGGAATTTT-CAGT--AAGAA-GAAAATCCGTTGATTTG-------AAAAATCGTGAGGGTTCAAGTCCCTCTATCCCCAAAAGTCTACTTACACAAATTATGCTAT-----------ACTTGGGAAA---CGCCTTT----------------TTTAACATGCACTGCCCTT--------------------TTATTGATTTCATTTTCCTTAAACA--------------AGATCT-ATCATCCGAATC-------------------TACAAGGGGAAATG-GGTCGGGATAGCTCAGTCGGT---------------------------------------- Cuscuta_obtusiflora_glandulosa ------------------------------GATTGAGCCTTTGTATGGAAACTTAC-TAAGTGATCACTTTCAAATTCAGAGAAACCCTGGAAT-TAATAATAAA--GGGGCAATCCTGAGCCAAATCC---TTTTT------------AGAAT-----------------AAAAAAAA--CTAAGGA---------GAGGTGCAGAGACTCAACGGAAGCTTTTCT--AACCAATG-------TGAAA-----------ATATATTTTT-TTACC-------AAGCTGA-TTAAAGAATAAAGAGAGAGTCCGTTTCTACATGTCAAT---ATGGACAGTAATGAAATTTT-CAGT--AAAAA-GAAAATCCGTCGATTTG-------AAAAATCATGAGGGTTCAAGTCCCTCTATCCCCAAAAGCCC-----AACAAACTACTCTCT-----------GCTTGGTACTTT-TGGCTCAAATTTT-----------TTAACGTGCACTACCCTT---------------------TATGGGTTTCATTTCCCTTCAATC--------------TAATCT-ACAATTTGAATC-------------------TCCAGTGGGAAATG-GGTCGGGATAGCTCAGTCGGTAGAGCAGAGGACTGAAAATCCTCGT--------------- Cuscuta_obtusiflora -------------------GGACTTAATTGGATTGAGCCTTTGTATGGAAACTTAC-TAAGTGATCACTTTCAAATTCAGAGAAACCCTGGAAT-TAATAAAAA---GGGGCAATCCTGAGCCAAATCC---TTTTT------------AAAAT-----------------AAAAAAAA--CTAAGGA---------GAGGTGCAGAGACTCAACGGAAGCTTTTCT--AACCAATG-------TGAAA-----------ATATATTTTT-TTACC-------AAGCTGA-TTAAAGAATAAAGAGAGAGTCCGTTTCTACATGTCAAT---ATGGACAGTAATGAAATTTT-CAGT--AAAAA-GAAAATCCGTCGATTTG-------AAAAATCATGAGGGTTCAAGTCCCTCTATCCCCAAAAGCCC-----AACAAACTACTCTCT-----------GCTTGGTACTTT-TGGCTCAAATTTT-----------TTAACGTGCACTACCTTT------------------------------CATTTCCCTTCAATC--------------TAATCT-ACAATTTGAATC-------------------TCCAGTGGGAAATG-GGTCGGGATAGCTCAGTCGGTAGAGCAGAGGACTGAAAATCCTCGTGTCACCA-------- Cuscuta_nevadensis_585 ------------------CGGACTTAATTGGATTGAGCCTTGGTATGGAAGCTTAC-TAAGTGAGAACTTTCAAATTCAGAGAAACCCTGAAAT-TAATACAAA----GGGCAATCCTGAGCCAAATCCTTTGTTTCTATTT-------ATAATTTTATAAAAAAATTTGATAAAAAAC--CTAAGGA---------GAGGTGCAGAGACTCTACGGAAGCATTTCT--AACTAACG-------CACAA-A-----------ATAGTTTT-TTACTACAC---AAGCTGA-TTAGAGAATAAAGAGAGAGTCCTTTTCTACATGTCCAT---GTGGACAGTAATGAAATTTT-CAGT--AAGAA-GAAAATCCGTCGATTTT-------TAAAATCGTGAGGGTTCAAGTCCCTCTATCCCCAAAATCCT-----AAAAAACTACTTTTG----TTG-----------AAAGAGGAAACACCAGG---------------------CAATCCCCGTA-----------------------CTATAACCTTATCCTTCAATA--------------GAATTT-CGAATTAGAATC-------------------AAGAGTGGGAAATG-AGTCGGGATAGCTCAGTCGGTAGAGCAGAGGACTGAAAATCCTCGTG-------------- Cuscuta_nevadensis_476 ----------TGACGCTACGGACTTAATTGGATTGAGCCTTGGTATGGAAGCTTAC-TAAGTGAGAACTTTCAAATTCAGAGAAACCCTGAAAT-TAATACAAA----GGGCAATCCTGAGCCAAATCCTTTGTTTCTATTT-------ATAATTTTATAAAAAAATTTGATAAAAAAC--CTAAGGA---------GAGGTGCAGAGACTCTACGGAAGCATTTCT--AACTAACG-------CAAAA-A-----------ATAGTTTT-TTACTACAC---AAGCTGA-TTAGAGAATAAAGAGAGAGTCCTTTTCTACATGGCCAT---GTGGACAGTAATGAAATTTT-CAGT--AAGAA-GAAAATCCGTCGATTTT-------TAAAATCGTGAGGGTTCAAGTCCCTCTATTCCCAAAATCCT-----AAAAAACTACTTTAT---GTTG-----------AAAGAGGAAACACCAGG---------------------CAATCCCCGTA-----------------------CTATAACCTTATCCTTCAATA--------------GAATTT-CGAATTAGAATC-------------------AAGAGTGGGAAATG-AGTCGGGATAG-------------------------------------------------- Cuscuta_mitriformis_584 ------------------CGGACTTAATTGGATTGAGCCTTGGTATGGAAACTTAC-TAAGTGATCACTTTCAAATTCAGAGAAACCCTGGAAT-GAAGACAAT----GGGCAATCCTGAGCCAAATCC---TTTTT------------CTTTTTTT-------------ATAAAAAAA--CTAAGGA---------AAGGTGCAGAGACTCAACGGAAGCTTTTCT--AACCAATA-------AAAAA-AGAAAGTCTGATATATCTTT-TTACCGA-------ACTGA-TTAGAGAATAAAGAGAGAGTCCTTTTCTACATGTCAAT---ATGGACAGTAATGAAATTTT-CAGT--AAGAA-GAAAATCCGTTGATTTT-------AAAAATCGTGAGGGTTCAAGTCCCTCTATCCCCAAAGGCCT-----AACAAA------------CTTGGTGCATGGTTCAAACGAGGAACGT--------------------CCTTGCAATCCCCTT--------------------TTATTAGTTTCATTTCCCTTCAATA--------------TAATTT-ATAATTAGAATC---------------------------AAAATA-GGTCGGGATAGCTCAGTTGGTAGAGCAGAGGACTGAAAATCCTCGTG-------------- Cuscuta_mitriformis_556 ----------------TACGGACTTAATTGGATTGAGCCTTGGTATGGAAACTTAC-TAAGTGATCACTTTCAAATTCAGAGAAACCCTGGAAT-GAAGACAAT----GGGCAATCCTGAGCCAAATCC---TTTTT------------CTTTTTTT-------------ATAAAAAAA--CTAAGGA---------AAGGTGCAGAGACTCAACGGAAGCTTTTCT--AACCAATA-------AAAAA-AGAAAGTCTGATATATATTT-TTACCGA-------ACTTA-TTAGAGAATAAAGAGAGAGTCCTTTTCTACATGTCAAT---ATGGACAGTAATGAAATTTT-CAGT--AAGAA-GAAAATCCGTTGATTTT-------AAAAATCGTGAGGGTTCAAGTCCCTCTATCCCCAAAGGCCT-----AACAAA------------CTTGGTGCATGGTTCAAATGAGGAACGT--------------------ACTTGCAATCCCCTT--------------------TTATTGGTTTCATTTCCCTTCAATA--------------TAATTT-ATAATTAGAATC-------------------TGCAATAGGAAATA-GGTCGGGATAGCTCAGTTGGTAGAGCAGAGGACTGAAAATCCTCGTGTCACCAA------- Cuscuta_micrantha_988 ------------------------------------------------------------------ACTTTCAAATTCAGAGAAACCCTGGAAT-TAATAAAAA----GGGTAATCCTGAGCCAAATCC---TTTTT------------AGAATTAT-------------ATAAAAAAA--CGAAGGA---------AAGGTGCAGAGACTCAACGGAAGCTTTTCT--AACCAATTAAAAAAAAAAAA-AAAGAGTCTGATATATCTTT-TTACC-------AAACTGA-TTAGAGAATAAAGAGAGAGTCCGTTTCTACATGTCAAG---ATGGACAGTAATGAAATTTT-CAGT--AAGAA-GAAAATCCGTCGATTTG-------AAAAATCGTGAGGGTTCAAGTCCCTCTATCCCCAAAAGTCT-----AACAAATTACGCTCT-----------GCTTGGTATTTT----------TTTTTATT----CAAAAGGGAACCCCC-TTT----------------TAGG-GGTTTCATTTCCCTTTCATTTTAATA-TAATATCTAATTATAATAT-ATAATTCGAATC-------------------TACAGTGGGAAATG-GGTCGGGATAGCTCAGTCGGTAGAGCAGAGGACTGAAAATCCTCGTG-------------- Cuscuta_micrantha_709 ------------------------------GATTGAGCCTTGGTATGGAAACTTAC-TAAGTGATTACTTTCAAATTCAGAGAAACCCTGGAAT-TAATAAAAA----GGGTAATCCTGAGCCAAATCC---TTTTT------------AGAATTTT-------------ATAAAAAAA--CGAAGGA---------AAGGTGCAGAGACTCAACGGAAGCTTTTCT--AACCAATA-------AAAAA-AAAGAGTCTGATATATCTTT-TTACC-------AAACTGA-TTAGAGAATAAAGAGAGAGTCCGTTTCTACATGTCAAG---ATGGACAGTAATGAAATTTT-CAGT--AAGAA-GAAAATCCGTCGATTTG-------AAAAATCATGAGGGTTCAAGTCCCTCTATCCCCAAAAGTCT-----AACAAATTACGCGCT-----------ACTTGGTATTTT----------TTTTGATT----CAAAAGGGAACCCCC-TTT----------------TAGG-GGTTTCATTTCCC------TTTAATA--------------TAATAT-ATAATTCGAATC-------------------TACAGTGGAAAATA-GGTCGGGATAGCTCAGTCGGTAGAGCAGAGGACTGAAAATCCTCGTGTCACCA-------- Cuscuta_micrantha_708 ------------------------------GATTGAGCCTTGGTATGGAAACTTAC-TAAGTGATTACTTTCAAATTCAGAGAAACCCTGGAAT-TAATAAAAA----GGGTAATCCTGAGCCAAATCC---TTTTT------------AGAATTTT-------------ATAAAAAAA--CGAAGGA---------AAGGTGCAGAGACTCAACGGAAGCTTTTCT--AACCAATA-------AAAAA-AAAGAGTCTGATATATCTTT-TTACC-------AAACTGA-TTAGAGAATAAAGAGAGAGTCCATTTCTACATGTCAAG---ATGGACAGTAATGAAATTTT-CAGT--AAGAA-GAAAATCCGTCGATTTG-------AAAAATCATGAGGGTTCAAGTCCCTCTATCCCCAAAAGTCT-----AACAAATTACGCGCT-----------GCTTGGTATTTT----------TTTTGATT----CAAAAGGGAACCCCC-TTT----------------TAGG-GGTTTCATTTCCC------TTTAATA--------------TAATAT-ATAATTTGAATC-------------------TACAGTGGGAAATA-GGTCGGGATAGCTCAGTCGGTAGAGCAGAGGACTGAAAATCCTCGTGTCACCAAATT---- Cuscuta_mcvaughii ------------------------------GATTGAGCCTTGGTATGGAAACTTAC-TAAGTGATCACTTTCAAATTCAGAGAAACCCTGGAAT-AAATAAAAG----GGGCAATCCTGAGCCAACTCC---TTGATTAT---------------------------------------------GGA---------TAGGTGCAGAGACTCAATGGAAGCTTTTCT--AACAAATG------CACAAA-AATAGTTTG-ATAAATATTT-TTAC--------AAACTTA-ATTGAGAATAAAGAGAGAGTCCTTTTCTACATGTCAATACAACATATCTAAATGAAATTGT-CAGT--AAGAA-GAAAATCCGTGGATTGG-------AAAAATCGTGAGGGTTCAAGTCCCTCTATCCCCAAAGATAG-----AAAAAACTGCTATTAAGCTCACCGCCTTTATTTGCATTTGCTTAGAAGGAC--------------------------TTTT---------------------------AGGTTTTTCATTTCCT-----------------------AAAATTTTC-------------------------ATTAGGAAATGAAGTTGGGATAGCTCAGCCGGTAGAGCAGAGGACTGAAAATCCTCGTGTCAC---------- Cuscuta_macrocephala_614_731 ---------------------ACTTAATTGGATTGAGCCTTGGTATGGAAACTTAC-TATGTGATCACTTTCAAATTCAGAGAAACCCTGGAAT-GAATACAAA----GGGCAATCCTGAGCCAAATCC---TTATTT-----------ATATATTT-------------ATAAAAAAA--CTATGGA---------GAGGTGCAGAGACTCAACGGAAGCTTTTCT--AACCAATG-------CAAAA-AAAGAATCTGATAGATCTCT-TTACCAC-----AAAATGA-TTAGAGAATAAAGAGAGAGTCCTTTTCTACATGTCAAT---ATGGACAGTAATGAAATTTT-CAGT--ATGAA-GAAAATCCGTCGATTTG-------AAAAATCGTGAGGGTTCAAGTCCCTCTATCCCCACAAACTG-----------CTCT-CTGC----TTTTTTTCAT-TTGCTTGGTGCATGGTTC-------------AAA--------CAATCTTTTTGT--------------------------TATGGGTTTCATTTCCC--------------GTAAT-ATAATTAATAATTAGAATC------------TACAGTAGGAAATG-GGTCGGGATAGCTCAGTCGGTAGAGCAGAGGACTGAAAATCCT------------------ Cuscuta_macrocephala_613 ------------------------------GATTGAGCCTTAGTATGGAAACTTAC-TATGTGATCACTTTCAAATTCAGAGAAACCCTGGAAT-GAATACAAA----GGGCAATCCTGAGCCAAATCC--TTAATTT-----------ATATATTT-------------ATAAAAAAA--CTAAGGA---------GAGGTGCAGAGACTCAACGGAAGCTTTTCT--AACCAATG-------CAAAA-AAAGAATCTGATAGATCTCT-TTACCAC-----AAACTGA-TTAGAGAATAAAGAGAGAGTCCTTTTCTACATGTCAAT---ATGGACAGTAATGAAATTTT-CAGT--ATGAA-GAAAATCCGTCGATTTT-------TCAAATCGTGAGGGTTCAAGTCCCTCTATCCCCACAAACTG-----------CTCT-CTGC----TTTTTTTCAT-TTGCTTGGTGCATGGTTC-------------AAA--------CAATCTTTTTGT--------------------------TATGGGTTTCATTTCCC--------------GTAAT-ATAATTAATAATTAGAATC------------TACAGTAGGAAATG-GGTCGGGATAGCTCAGTCGGTAGAGCAGAGGACTGAAAATCCTCGTGTCAACC-------- Cuscuta_longiloba ------------------------------GATTGAGCCTTGGTATGGAAACTTAC-TAAGTGATCACTTTCAAATTCAGAGAAACCCTGGAAT-GAGTACAAA----GGGCAATCCTGAGCCAAATCC---TTTTTA------------GAATTTTATAAAA------TATAAAAAA-----AAGGA---------GAGGTGCAGAGACTCAACGGAAGCTTTTCT--AACCAATG-------CAAAATAA---------------------------------------TTAGAGAATAAAGAGAGAGTCCTTTTCGACATGTCCAT---ATGGACAGTAATGAAATTTT-CAGT--AAGAA-GAAAATCCGTCGATTTA-------AAAAATCGTGAGGGTTCAAGTCCCTCTATCCCCAAAAGCCT-----AAAAAAAAACTACT--AT------CTGNTTGGTACTTGGTTCG------------------------ACTANGAAACCCCTTA------------------TTATGGGTTTCATTTCCCTTC-------------------------ATAATTAGAATC-------------------TACAATAGGAAATG-GGTTGGGATAGCTCAGTCGGTAGAGCAGAGGACTGAAAATCCTCGTGTCACCA-------- Cuscuta_lindsayi -------------------------------------CCTTGGTATGGAAACTTAC-TAAGTGATCACTTTCAAATTCAGAGAAACCCTGGAAT-GAAGACAAT----GGGCAATCCTGAGCCAAATCC---CTTTT---------------------------------ATAAAAAAA--CTAAGGA---------GAGGTGCAGAGACTCAACGGAAGCTTTTCT--AACCAATA-------CAAAA-AGGGAGTCTGATATATCTTT-TTACCAA-------ACTGA-TTAGAGAATAAAGAGAGAGTCCTTTTCTACATGTCAAT---ATGGACAGTAATGAAATTTT-CGGT--AAGAA-GAAAATCCGTTGATTTT-------AAAAATCGTGAGGGTTCAAGTCCCTCTATCCCCAAAGGCTT-----AACAAACTACTCTCT--GCTTGGTGCATGGTTCAAATGGGGAACGTCTTTTT-----------TTAACTTGTAATCCCCTT--------------------TTATGGATTTCATTTCCCTTCAATA--------------TAATTT-ATAATTAGAATC-------------------TGCAATAGGAAATA-GGTCGGGATAGCTCAGTCGG----------------------------------------- Cuscuta_liliputana_848 ------------------------------GATTGAGCCTTGGTATGGAAACTTAC-TAAGTGATCACTTTCAAATTCAGAGAAACCCTGGAAC-AAATAAATG----GGGCAATCCTGAGCCAAATCC---TTTATT-----------CTTTTATT-------------CTAAAAAA---CTAAGGA---------TAGGTGCAGAGACTCAACGGAAGCTTTTCT--AACAAAGG-------CAAAA-AGAGCGTAT---------TT-TTAC--------AAA-----TTCGAGAATAAAGAGAGAGTCCTTTTCTACATGTCAAT---ATAGACAGCAATGAAATTTTTACGT--AATAA-GAAAATCCGTGGATTTG-------AAAAATCGTGAGGGTTCAAGTCCCTCTATCCCCATAGGCTA-----CTATGCCTTTAG-T-TGC------------------------ATTTAGTTTAGGA------AATTTGAAAAAACCCTTTCT-------AATTTGTACTTCCCTTTTAGTTTATTGATTGCCTTTCCTTGTCC---------ATAAT-AAAATTTAATTT-------------------TCGATTAGGAAATC-GGTCGGGATAGCTCAGCCGGTAGAGCAGAGGACTGAAAATCCTCGTGTCACCA-------- Cuscuta_liliputana_665 ------------------------------GATTGAGCCTTGGTATGGAAACTTAC-TAAGTGATCACTTTCAAATTCAGAGAAACCCTGGAAC-AAATAAATG----GGGCAATCCTGAGCCAAATCC---TTTATT-----------CTTTTATT-------------CTAAAAAA---CTAAGGA---------TAGGTGCAGAGACTCAACGGAAGCTTTTCT--AACAAAGG-------CAAAA-AGAGCGTAT---------TT-TTAC--------AAA-----TTCGAGAATAAAGAGAGAGTCCTTTTCTACATGTCAAT---ATAGACAGCAATGAAATTTTTACGT--AATAA-GAAAATCCGTGGATTTG-------AAAAATCGTGAGGGTTCAAGTCCCTCTATCCCCATAGGCTA-----CTATGCCTTTAG-T-TGC------------------------ATTTAGTTTAGGA------AATTTGAAAAAACCCTTTCT-------AATTTGTACTTCCCTTTTAGTTTATTGATTGCCTTTCCTTGTCC---------ATAAT-AAAATTTAATTT-------------------TCGATTAGGAAATC-GGTCGGGATAGCTCAGCCGGTA--------------------------------------- Cuscuta_liliputana_664 ------------------------------GATTGAGCCTTGGTATGGAAACTTAC-TAAGTGATCACTTTCAAATTCAGAGAAACCCTGGAAC-AAATAAATG----GGGCAATCCTGAGCCAAATCC---TTTATT-----------CTTTTATT-------------CTAAAAAA---CTAAGGA---------TAGGTGCAGAGACTCAACGGAAGCTTTTCT--AACAAAGG-------CAAAA-AGAGCGTAT---------TT-TTAC--------AAA-----TTCGAGAATAAAGAGAGAGTCCTTTTCTACATGTCAAT---ATAGACAGCAATGAAATTTTTACGT--AATAA-GAAAATCCGTGGATTTG-------AAAAATCGTGAGGGTTCAAGTCCCTCTATCCCCATAGGCTA-----CTATGCCTTTAG-T-TGC------------------------ATTTAGTTTAGGA------AATTTGAAAAAACCCTTTCT-------AATTTGTACTTCCCTTTTAGTTTATTGATTGCCTTTCCTTGTCC---------ATAAT-AAAATTTAATTT-------------------TCGATTAGGAAATC-GGTCGGGATAGCTCAGCCGGTA--------------------------------------- Cuscuta_leptantha_884 -----------GACGCTACGGACTTAATTGGATTGAGCCTTGGTATGGAAACTTAC-TAAGTGATCACTTTCAAATTCAGAGAAACCCTGGAAC-AAATAAATG----GGGCAATCCTGAGCCAAATCC---TTTATT-----------TTTTTATT-------------CTAAAAAA---CTACGGA---------TAGGTGCAGAGACTCAACGGAAGCTTTTCT--AACAAAGG-------CAAAA-AGAGCGTCT---------TT-TTAC--------AAA-----TTAGAGAATAAAGAGAGAGTCCTTTTCTACATGTCAAT---ATAGACAGCAATGAAATTTT-AAGT-AAGTAA-GAAAATCCGTGGATTTT-------AAAAATCGTGAGGGTTCAAGTCCCTCTATCCCCATAGGCTG-----CTATGCCTTTATTT-AGG------------------------------------A------AATTTGAAAAAACCCTTTCT------AAATTTGTACTTCCCTTTTGGTTTATTGATTGCCTTTCCTTGTCC---------ATAAT-AAAATTAAATTT-------------------GAGATTAGGAAATC-GGTCGGGATAGCTCAGCCGGTAGAGCAGAGGACTGAAAATCCTCGTGTCACC--------- Cuscuta_leptantha_719 -----------GACGCTACGGACTTAATTGGATTGAGCCTTGGTATGGAAACTTAC-TAAGTGATCACTTTCAAATTCAGAGAAACCCTGGAAC-AAATAAATG----GGGCAATCCTGAGCCAAATCC---TTTATT-----------TTTTTATT-------------CTAAAAAA---CTACGGA---------TAGGTGCAGAGACTCAACGGAAGCTTTTCT--AACAAAGG-------CAAAA-AGAGCGTCT---------TT-TTAC--------AAA-----TTAGAGAATAAAGAGAGAGTCCTTTTCTACATGTCAAT---ATAGACAGCAATGAAATTTT-AAGT-AAGTAA-GAAAATCCGTGGATTTT-------AAAAATCGTGAGGGTTCAAGTCCCTCTATCCCCATAGGCTG-----CTATGCCTTTATTT-AGG------------------------------------A------AATTTGAAAAAACCCTTTCT------AAATTTGTACTTCCCTTTTGGTTTATTGATTGCCTTTCCTTGTCC---------ATAAT-AAAATTAAATTT-------------------GAGATTAGGAAATC-GGTCGGGATAGCTCAGCCGGTAGAGCAGAGGACTGAAAATCCTCGTGTCACC--------- Cuscuta_leptantha_608 -----------GACGCTACGGACTTAATTGGATTGAGCCTTGGTATGGAAACTTAC-TAAGTGATCACTTTCAAATTCAGAGAAACCCTGGAAC-AAATAAATG----GGGCAATCCTGAGCCAAATCC---TTTATT-----------TTTTTATT-------------CTAAAAAA---CTACGGA---------TAGGTGCAGAGACTCAACGGAAGCTTTTCT--AACAAAGG-------CAAAA-AGAGCGTCT---------TT-TTAC--------AAA-----TTAGAGAATAAAGAGAGAGTCCTTTTCTACATGTCAAT---ATAGACAGCAATGAAATTTT-AAGT-AAGTAA-GAAAATCCGTGGATTTT-------AAAAATCGTGAGGGTTCAAGTCCCTCTATCCCCATAGGCTG-----CTATGCCTTTATTT-AGG------------------------------------A------AATTTGAAAAAACCCTTTCT------AAATTTGTACTTCCCTTTTGGTTTATTGATTGCCTTTCCTTGTCC---------ATAAT-AAAATTAAATTT-------------------GAGATTAGGAAATC-GGTCGGGATAGCTCAGCCGGTAGAGCAGAGGACTGAAAATCCTCGTGTCACC--------- Cuscuta_jalapensis_607 ---------------------ACTTAATTGGATTGAGCCTTGGTATGGAAACTTAC-TAAGTGATCACTTTCAAATTCAGAGAAACCCTGGAAT-GAAGACAAT----GGGCAATCCTGAGCCAAATCC---TTTTT------------ATTTTTTT-------------ATAAAAAAA--CTAAGGA---------AAGGTGCAGAGACTCAACGGAAGCTTTTCT--AACCAATA-------CAAAA-AGAAAATCTCATAGATCTTT-TTACCGA-------ACTCA-TTAGAGAATAAAGAGAGAGTCCTTTTCTACATGTCAAT---ATGGACAGTAATGAAATTTT-CAGT--AAGAA-GAAAATCCGTTGATTTT-------AAAAATCGTGAGGGTTCAAGTCCCTCTATCCCCAAGGGCCT-----AACAAA------------CTTGGTGCATGGTTCAAATGAGGAACGT--------------------ACTTGCAATCCCCTT--------------------TTATTGGTTTCATTTTCCTTCAATA--------------TAATTT-CTAATTAGAATC-------------------TGCAATAGGAAATA-GGTCGGGATAGCTCAGTCGGTA--------------------------------------- Cuscuta_jalapensis_606 ---------------------ACTTAATTGGATTGAGCCTTGGTATGGAAACGTAC-TAAGTGATCACTTTCAAATTCAGAGAAACCCTGGAAT-GAAGACAAT----GGGCAATCCTGAGCCAAATCC---TTTTT------------ATTTTTTT-------------ATAAAAAAA--CTAAGGA---------AAGGTGCAGAGACTCAACGGAAGCTTTTCT--AACCAATA-------CAAAA-AGAAAGTCTCATAGATCTTT-TTACCGA-------ACTCA-TTAGAGAATAAAGAGAGAGTCCTTTTCTACATGTCAAT---ATGGACAGTAATGAAATTTT-CAGT--AAGAA-GAAAATCCGTTGATTTT-------AAAAATCGTGAGGGTTCAAGTCCCTCTATCCCCAAGGGCCT-----AACAAA------------CTTGGTGCATGGTTCAAATGAGGAACGT--------------------ACTTGCAATCCCCTTA-------------------TTATTGGTTTCATTTTCCTTCAATA--------------TAATTT-CTAATTAGAATC-------------------TGCAATAGGAAATA-GGTCGGGATAGCTCAGTCGGTA--------------------------------------- Cuscuta_jalapensis_518_617 -----------GACGCTACGGACTTAATTGGATTGAGCCTTGGTATGGAAACTTAC-TAAGTGATCACTTTCAAATTCAGAGAAACCCTGGAAT-GAAGACAAT----GGGCAATCCTGAGCCAAATCC---TTTTT------------ATTTTTTT-------------ATAAAAAAA--CTAAGGA---------AAGGTGCAGAGACTCAACGGAAGCTTTTCT--AACCAATA-------CAAAA-AGAAAGTCTCATAGATCTTT-TTACCGA-------ACTCA-TTAGAGAATAAAGAGAGAGTCCTTTTCTACATGTCAAT---ATGGACAGTAATGAAATTTT-CAGT--AAGAA-GAAAATCCGTTGATTTT-------AAAAATCGTGAGGGTTCAAGTCCCTCTATCCCCAAGGGCCT-----AACAAA------------CTTGGTGCATGGTTCAAATGAGGAACGT--------------------ACTTGCAATCCCCTT--------------------TTATTGGTTTCATTTTCCTTCAATA-------TTCAATATAATTT-CTAATTAGAATC-------------------TGCAATAGGAAATA-GGTCGGGATAGCTCAGTCGGTAGAGCAGAGGACTGAAAATCCTCGTGTCACCAA------- Cuscuta_indecora_neuropeltata ------------------------------GATTGAGCCTTAGTATGGAAACTTAC-TAAGTGATCACTTTCAAATTCAGAGAAACCCTGGAATTAAAGAAAAA----GGGCAATCCTGAGCCAAATCC---TTTATT-----------CTATTTTT-------------ATAACAAA---CTAAGGA---------TAGGTGCAGAGACTCAAAGGAAGCTTTTCT--AACAAATG-------CAAGT-----------------------------------CACTAA-TTTGAGAATAAAGAGAGAGTCCTTTTCTACGTGTCAAT---ACAGATA---------TTTT-CAGT--AAGAA-GAAAATCCGTGGATTTT-------AAAAATCGTGAGGGTTCAAGTCCCTCTATCCCCACAAAATA-----CTATTCCGCTCACCA--CCTTTCTTTTATTTTCAG-TTGGTT------------------CAAATAAAAAAAAGCCCTTCT--------------------------CAGTTTTGTTTTACTCTCCTA--------------------------------------------TTAGTTACCTAAAG---------TCGGGATAGCTCAGCCGGTAGAGCAGAGGACTGAAAATCCTC----------------- Cuscuta_indecora_longisepala -----------------------------GGATTGAGCCTTAGTATGGAAACTTAC-TAAGTGATCACTTTCAAATTCAGAGAAACCCTGGAATTAAAGAAAAG----GGGCAATCCTGAGCCAAATCC---TTTATT-----------ATATTTTT-------------ATAACAAA---CTAAGGA---------TAGGTGCAGAGACTCAAAGGAAGCTTTTCT--AACAAATG-------CAAGT-----------------------------------CACTAA-TTTGAGAATAAAGAGAGAGTCCTTTTCTACGTGTCAAT---ACAGATAGTAATGAAATTTT-CAGT--AAGAA-GAAAATCCGTGGATTTT-------AAAAATCGTGAGGGTTCAAGTCCCTCTATCCCCACAAAATA-----CTATTCCGCTCACCA--CCTTTATTTTATTTTCAG-TTGGTT------------------CAAATAAAAAAAAGCCCTTCT--------------------------CAGTTTTGTTTTACTCTCCTA--------------------------------------------TTAGTTACCTAAAGGAAATGAAGTCGGGATAGCTCAGCCGGTAGAGCAGAGGAC---------------------------- Cuscuta_indecora_attenuata_723 ------------------------------GATTGAGCCTTAGTATGGAAACTTAC-TAAGTGATCACTTTCAAATTCAGAGAAACCCTGGAATTAAAGAAAAG----GGGCAATCCTGAGCCAAATCC---TTTATT-----------ATATTTTT-------------ATAACAAA---CTAAGGA---------TAGGTGCAGAGACTCAAAGGAAGCTTTTCT--AACAAATG-------CAAGT-----------------------------------CACTAA-TTTGAGAATAAAGAGAGAGTCCTTTTCTACGTGTCAAT---ACAGATAGTAATGAAATTTT-CAGT--AAGAA-GAAAATCCGTGGATTTT-------AAAAATCGTGAGGGTTCAAGTCCCTCTATCCCCACAAAATA-----CTATTCCGCTCACCA--CCTTTATTTTATTTTCAG-TTGGTT------------------CAAATAAAAAAAAGCCCTTCT--------------------------CAGTTTTGTTTTACTCTCCTA--------------------------------------------TTAGTTACCTAAAGGAAATGAAGTCGGGATAGCTCAGCCGGTAGAGCAGAGGACTGAAAATCCTC----------------- Cuscuta_indecora_attenuata_721_724 ----------------------CTTAATTGGATTGAGCCTTAGTATGGAAACTTAC-TAAGTGATCACTTTCAAATTCAGAGAAACCCTGGAATTAAAGAAAAA----GGGCAATCCTGAGCCAAATCC---TTTATT-----------CTATTTTT-------------ATAACAAA---CTAAGGA---------TAGGTGCAGAGACTCAAAGGAAGCTTTTCT--AACAAATG-------CAAGT-----------------------------------CACTAA-TTTGAGAATAAAGAGAGAGTCCTTTTCTACGTGTCAAT---ACAGATAGTAATGAAATTTT-CAGT--AAGAA-GAAAATCCGTGGATTTT-------AAAAATCGTGAGGGTTCAAGTCCCTCTATCCCCACAAAATA-----CTATTCCGCTCACCA--CCTTTCTTTTATTTTCAG-TTGGTT------------------CAAATAAAAAAAAGCCCTTCT--------------------------CAGTTTTGTTTTACTCTCCTA--------------------------------------------TTAGTTACCTAAAG---------TCGGGATAGCTCAGCCGGTAGAGCAGAGGACTGAAAATCCTCGTGTCAC---------- Cuscuta_indecora_561_720_728 ---------------------ACTTAATTGGATTGAGCCTTAGTATGGAAACTTAC-TAAGTGATCACTTTCAAATTCAGAGAAACCCTGGAATTAAAGAAAAG----GGGCAATCCTGAGCCAAATCC---TTTATT-----------ATATTTTT-------------ATAACAAA---CTAAGGA---------TAGGTGCAGAGACTCAAAGGAAGCTTTTCT--AACAAATG-------CAAGT-GT--------------------------------CACTAA-TTTGAGAATAAAGAGAGAGTCCTTTTCTACGTGTCAAT---ACAGATAGTAATGAAATTTT-CAGT--AAGAA-GAAAATCCGTGGATTTT-------AAAAATCGTGAGGGTTCAAGTCCCTCTATCCCCACAAACTA-----CTATTCCGCTCACCA--CCTTTATTTTATTTTCAG-TTGGTT------------------CAAATAAAAAAAAGCCCTTCT--------------------------CAGTTTTGTTTTACTCTCCTA--------------------------------------------TTAGTTACCTAAAGGAAATGAAGTCGGGATAGCTCAGCCGGTAGAGCAGAGGACTGAAAATCCTC----------------- Cuscuta_indecora_525 --------------------GACTAAATTGGATTGAGCCTTAGTATGGAAACTTAC-TAAGTGATCACTTTCAAATTCAGAGAAACCCTGGAATTAAAGAAAAA----GGGCAATCCTGAGCCAAATCC---TTTATT-----------CTATTTTT-------------ATAACAAA---CTAAGGA---------TAGGTGCAGAGACTCAAAGGAAGCTTTTCT--AACAAATG-------CAAGT-----------------------------------CACTAA-TTTGAGAATAAAGAGAGAGTCCTTTTCTACGTGTCAAT---ACAGATA---------TTTT-CAGT--AAGAA-GAAAATCCGTGGATTTT-------AAAAATCGTGAGGGTTCAAGTCCCTCTATCCCCACAAAATA-----CTATTCCGCTCACCA--CCTTTCTTTTATTTTCAG-TTGGTT------------------CAAATAAAAAAAAGCCCTTCT--------------------------CAGTTTTGTTTTACTCTCCTA--------------------------------------------TTAGTTACCTAAAG---------TCGGGATAGCTCAGCCGGTAGAGCAGAGGACTGAAAATCCTCG---------------- Cuscuta_incurvata ------ACTTGACGGCTACGGACTTAATTGGATTGAGCCTTGGTATGGAAACTTAC-TAAGTGATCACTTTCAAATTCAGAGAAACCCTGGAAT-TAATAAAAA----GGGCAATCCTGAGCCAAATCC---TTGTT------------CGAATTTT-------------ATAAAAAAA--CTAAGGA---------AAGGTGCAGAGACTCAACGGGAGCTTTTCT--AACCAATT-------TAAAA-AAAGAGTCTGATATATCTTT-TTACC-------AAACTGA-TTAGAGAATAAAGAGAGAGTCCGTTTCTACATGTCAAT---ATGGACAGTAATGAAATTTT-CAGT--AAGAA-GAAAATCCGTTGATTTG-------AAAAATCGTGAGGGTTCAAGTCCCTCTATCCCCAAAAGCCT-----AACAAATTACGCTCT-----------GCTTGGTA--------------------------CAAATGGGAACCGCCTTTTTTTGATATGCACTCCCCTTT---TA--------------------------------------------------------------------------------------TG-GGTCGGGATAGCTCAGTCGGTAGAGCAGAGGACTGAAAATCC------------------- Cuscuta_hyalina_994 ------------------------------GATTGAGCCTTGGTATGGAAACTTAC-TAAGTGATCACTTTCAAATTCAGAGAAACCCTGGAAA-AAATAAATG----GGGCAATCCTGAGCCAAATCC---TTTATT--------------------------------CTAAAAAA---CTAAGGA---------TAGGTGCAGAGACTCAATGGAAGCTTTTCT--AACAAAGG-------CAAAA-AGAGCGTCT---------TT-TTAC--------AAA-----TTAGAGAATAAAGAGAGAGTCCTTTTCTACATGTCAAT---ATAGACAGCAATGAAATTTT-AAGT--AAGAA-GAAAATCCGTGGATTTT-------AAAAATCGTGAGGGTTCAAGTCCCTCTATCCCCATAGGCTG-----CTA-------TTTT-TGC-------------------------------------------ATTTTGAAAAAACCCTTTCT-------AATTTGTATTTCCCTTTTAGTTTATTGATTATTGAG----GTCC---------ATAAT-AAAATT----------------------------ATTAGGAAATC-GGTCGGGATAGCTCAGCCGGTAGAGCAGAGGACTGAAAATCCTCGTGTCAC---------- Cuscuta_hyalina_889 ------------------------------GATTGAGCCTTGGTATGGAAACTTAC-TAAGTGATCACTTTCAAATTCAGAGAAACCCTGGAAA-AAATAAATG----GGGCAATCCTGAGCCAAATCC---TTTATT--------------------------------CTAAAAAA---CTAAGGA---------TAGGTGCAGAGACTCAATGGAAGCTTTTCT--AACAAAGG-------CAAAA-AGAGCGTCT---------TT-TTAC--------AAA-----TTAGAGAATAAAGAGAGAGTCCTTTTCTACATGTCAAT---ATAGACAGCAATGAAATTTT-AAGT--AAGAA-GAAAATCCGTGGATTTT-------AAAAATCGTGAGGGTTCAAGTCCCTCTATCCCCATAGGCTG-----CTA-------TTTT-TGC-------------------------------------------ATTTTGAAAAAACCCTTTCT-------AATTTGTATTTCCCTTTTAGTTTATTGATTATTGAG----GTCC---------ATAAT-AAAATT----------------------------ATTAGGAAATC-GGTCGGGATAGCTCAGCCGGTAGAGCAGAGGACTGAAAATCCTCGTGTCAC---------- Cuscuta_hyalina_875 ------------------------------GATTGAGCCTTGGTATGGAAACTTAC-TAAGTGATCACTTTCAAATTCAGAGAAACCCTGGAAA-AAATAAATG----GGGCAATCCTGAGCCAAATCC---TTTATT--------------------------------CTAAAAAA---CTAAGGA---------TAGGTGCAGAGACTCAATGGAAGCTTTTCT--AACAAAGG-------CAAAA-AGAGCGTCT---------TT-TTAC--------AAA-----TTAGAGAATAAAGAGAGAGTCCTTTTCTACATGTCAAT---ATAGACAGCAATGAAATTTT-AAGT--AAGAA-GAAAATCCGTGGATTTT-------AAAAATCGTGAGGGTTCAAGTCCCTCTATCCCCATAGGCTG-----CTA-------TTTT-TGC-------------------------------------------ATTTTGAAAAAACCCTTTCT-------AATTTGTATTTCCCTTTTAGTTTATTGATTATTGAG----GTCC---------ATAAT-AAAATT----------------------------ATTAGGAAATC-GGTCGGGATAGCTCAGCCGGTAGAGCAGAGGACTGAAAATCCTCGTGTCAC---------- Cuscuta_howelliana_654_656 --------------------GACTTAATTGGATTGAGCCTTGGTATGGAAACGTAC-TAAGTGATCACTTTCAAATTCAGAGAAACCCTGGAAT-TATTGAAAT----GGGCAATCCTGAGCCAAATCC---TTTTT------------ATAATCTT-------------CTAAAAAAA--CTAAGGA---------GAGGTGCAGAGACTCAACGGAAGCTTTTCT--AACCAATG-------TGAAA-AAATAGTCTGCTACATCTTT-CTCCC-------AGACTTA-TTAGAGAATAAAGAGAGAGTCCTTTTCTACATGTCAAT---ATGGACAGTAATGGAATTTT-CAGT--AAGAA-GAAAATCCGTTGATTTG-------AAAAATCGTGAGGGTTCAAGTCCCTCTATCCCCAAAAGCCT-----AACAAATTATGCTCT-----------GCTTGGGAA-----------------------------------------------------------------------------------------------------------------------------------------------CTGCGTAGGAAATG-GGTCGGGATAGCTCAGTTGGTAGAGCAGAGGACTGAAAATCCTCGTGTCACCAATTAAGT- Cuscuta_howelliana_357_655 -----------------------TTAATTGGATTGAGCCTTGGTATGGAAACGTAC-TAAGTGATCACTTTCAAATTCAGAGAAACCCTGGAAT-TAATGAAAT----GGGCAATCCTGAGCCAAATCC---TTTTT------------ATAATCTT-------------CTAAAAAAA--CTAAGGA---------GAGGTGCAGAGACTCAACGGAAGCTTTTCT--AACCAATG-------TGAAA-AACGAGTCTGCTACATCTTT-CTACC-------AGACTTA-TTAGAGAATAAAGAGAGAGTCCTTTTCTACATGTCAAT---ATGGACAGTAATGGAATTTT-CAGT--AAGAA-GAAAATCCGTTGATTTG-------AAAAATCGTGAGGGTTCAAGTCCCTCTATCCCCAAAAGCCT-----AAAAAATTATGCTCT-----------GCTTGGGAAGAGACGCCTTT---------------TTTTAACATCCACTGCCCTTT--------------------TATTGATTTCAGTTTCTTTCAATA--------------GGATCT-AT-----------------------------CACAGTAGGAAATT-GGTCGGGATAGCTCAGTTGGTAGAGCAGAGGACTGAAAATCCT------------------ Cuscuta_haughtii -----------GACGCTACGGACTTAATTGGATTGAGCCTTGGTATGGAAACTTAC-TAAGTGATCACTTTCAAATTCAGAGAAACCCTGGAAT-GAGTACAAA----GGGCAATCCTGAGCCAAATCC---TTTTTA------------TAATTTTATAAAAAAAA---ATAAAAAA-----AAGGA---------TAGGTGCAGAGACTCAACGGAAGCTTTTCT--AACCAATG-------CAAAATAAAGAATCTAATATATCTTTGTTACC-------AAACTGA-TTAGAGAATAAAGAGAGAGTCCTTTTCGACATGTCCAT---ATGGACAGTAATGAAATTTT-CAGT--AAGAA-GAAAATCCGTCGATTTA-------AAAAATCGTGAGGGTTCAAGTCCCTCTATCCCCAAAAGCCT-----AAAAAAAAACTATT--AT------CTGCTTGGTACTTGGTTCG------------------------ACTAGGAAACCCCTTA---------TTATA----TTATTGGTTTCATTTCCCTTC-------------------------ATAATTAGAATC-------------------TACAATAGGAAATA-GGTCGGGATAGCTCAGTCGGTAGAGCAGAGGACTGAAAATCCTCGTGTCAC---------- Cuscuta_harperi -----------GACGCTACGGACTTAATTGGATTGAGCCTTGGTATGGAAACTTAC-TAAGTGAGCACTTTCAAATTCAGAGAAACCCTGGAAT-TAATAAAAA----AGGCAATCCTGAGCCAAATCC---TTTTT------------AGAAT-------------------AAAAAA--CTAAGGA---------GAGGTGCAGAGACTCAACGGAAGCTTTTCT--AACCAATG-------TGAAA-----------ATATATTTTT-TTACC-------AAGCTGA-TTAAAGAATAAAGAGAGAGTCCGTTTCTACATGTCAAT---ATGGACAGTAATGAAATTTT-CAGT--AAGAA-GAAAATCCGTCGATTTG-------AAAAATCGTGAGGGTTCAAGTCCCTCTATCCCCAAAAGCCC-----AACAAACTACTCTCT-----------GCTTGGTACTTTATGGCTCAAATTTT-----------TTAACGTGCACTCC-------------------------------TTTCATTTGCCTTCAATC--------------TAATCT-ACAATTTGAATC-------------------TCCAGTGGGAAATG-GGTCGGGATAGCTCAGTCGGTAGAGCAGAGGACTGAAAATCCTCGTGTCACCA-------- Cuscuta_gymnocarpa ------------------------------GATTGAGCCTTGGTATGGAAACTTAC-TAAGTGATCACTTTCAAATTCAGAGAAACCCTGGAAT-GAATAAAAA----GGGCAATCCTGAGCCAAATCC---TTTTT------------AGAAT----------------AAAAAAAAA--CTAAGGA---------AAGGTGCAGAGACTCAACGGAAGCTTTTCT--AACCAATG-------TGAAA-----------ATATATTTTT-TTACC-------AAGCTGA-TTAAAGAATAAAGAGAGAGTCCGTTTCTACATGTCAAT---ATGGACAGTAATGAAATTTT-CAGT--AAGAA-GAAAATCCGTCGATTTG-------AAAAATTGTGAGGGTTCAAGTCCCTCTATCCCCAAAAGCCC-----AACAAACTACTCTCT-----------GCTTGGTACTTT-TGGCTCAA--------------------CGTGCACTCCCCTT---------------------TATTGGTTTCATTTCCGTTCAATC--------------TAATCT-CGAATTTGAATC-------------------TACAGTGGGAAATG-GGTCGGGATAGCTCAGGCGGTAGAGCAGAGGACTGAAAATCCTCGTGTCACC--------- Cuscuta_gronovii_latiflora_704 ------------------------------GATTGAGCCTTGGTATGGAAACTTAC-TAAGTGATCACTTTCAAATTCAGAGAAACCCTGGAAT-TAATAGAAA----GGGCAATCCTGAGCCAAATC--------------------------TTT-------------ATAAAAAAC--TTAAGGA---------GAGGTGCAGAGACTCAACGGAAGCTTTTCT--AACCAACG-------CAAAA-T---------CAAGATCTTT-TTACCAA-----AAAATGA-TTAGAGAATAAAGAGAGAGTCCTTTTCTACATGTAAAC---ATGTACAGTAATGAAATTTT-CAGT--AGGAA-GAAAATCCGTCGATTTG-------AAAAATCGTGAGGGTTCAAGTCCCTCTATCCCCAAAACCC------CTGTTGGTACTTGGT---------TCAAATGGGAAA------TTGCCTTT-------------TTAGTGTGCAATCCCCTTC-------------------TTATTGGTTTCATTTATCTTCAATA--------------AAATTT-AGGATTAGAATC-------------------TATAGTGGGAAATG-GGTCGGGATAGCTCAGTCGGTAGAGCAGAGGACTGAAAATCCT------------------ Cuscuta_gronovii_latiflora_703 -------------------AGACTTAATTGGATTGAGCCTTGGTATGGAAACTTAC-TAAGTGATAACTTTCAAATTCAGAGAAACCCTGGAAT-TAATAGAAA----GGGCAATCCTGAGCCAAATC--------------------------TTT-------------ATAAAAAAC--TTAAGGA---------GAGGTGCAGAGACTCAACGGAAGCTTTTCT--AACCAACA-------CAAAA-T---------CAA----------ACCAA-----AAACTGA-TTAGAGAATAAAGAGAGAGTCCTTTTCTACATGTAAAC---ATGTACAGTAATGAAATTTT-CAGT--AGGAA-GAAAATCCGTCGATTTG-------AAAAATCATGAGGGTTCAAGTCCCTCTATCCCCAAAACCC------CTGTTGGTACTTGGT---------TCAAATGGGAAA------TTGCCTTT-------------TTARCGTGCAACCCCCTTC-------------------TTATTGGTTTCATTTATCTTCAATA--------------AAATTT-AGGATTAGAATC-------------------TATAGTGGGAAATG-GGTCGGGATAGCTCAGTCGGTAGAGCAGAGGACTGAAAATCCTCGTGTCAC---------- Cuscuta_gronovii_calyptrata ------------------------TAATTGGATTGAGCCTTGGTATGGAAACTTAC-TAAGTGATCACTTTCAAATTCAGAGAAACCCTGGAAT-TAATAGAAA----GGGCAATCCTGAGCCAAATC--------------------------TTT-------------ATAAAAAAC--TTAAGGA---------GAGGTGCAGAGACTCAACGGAAGCTTTTCT--AACCAACG-------CAAAA-T---------CAAGATCTTT-TTACCAA-----AAAATGA-TTAGAGAATAAAGAGAGAGTCCTTTTCTACATGTAAAC---ATGTACAGTAATGAAATTTT-CAGT--AGGAA-GAAAATCCGTCGATTTG-------AAAAATCATGAGGGTTCAAGTCCCTCTATCCCCAAAACCC------CTGTTGGTACTTGGT---------TCAAATGGGAAA------TTGCCTTT-------------TTAGTGTGCAATCCCCTTC-------------------TTATTGGTTTCATTTATCTTCAATA--------------AAATTT-AGGATTAGAATC-------------------TATAGTGGGAAATG-GGTCGGGATAGCTCAGTCGG----------------------------------------- Cuscuta_gronovii_702 ------------------------------GATTGAGCCTTGGTATGGAAACTTAC-TAAGTGATAACTTTCAAATTCAGAGAAACCCTGGAAT-TAATAGAAA----GGGCAATCCTGAGCCAAATCC---TTTTT------------ATAATTTT-------------ATAAAAAAC--TTAAGGA---------GAGGTGCAGAGACTCAACGGAAGCTTTTCT--AACCAACG-------CAAAA-T---------CAAGATCTTT-TTACCAA-----AAACTGA-TTAGAGAATAAAGAGAGAGTCCGTTTCTACATGTAAAC---ATGGACAGTAATGAAATTTT-CAGT--AGGAA-GAAAATCCGTCGATTTG-------AAAAATCGTGAGGGTTCAAGTCCCTCTATCCCCAAAAGCCT-----CTGTTGGTACTTGGT---------TCAAATGGGAAA------TTGCCTTT-------------TTAGCGTGCAATCCCCTTC-------------------TTATTGGTTTCATTTCTCTTCAATA--------------AAATTT-AGGATTAGAATC-------------------TATAGTGGGAAATG-GGTCGGGATAGCTCAGTCGGTAGAGCAGAGGACTGAAAATCCTC----------------- Cuscuta_gronovii_343 ------------ACGCTACGGACTTAATTGGATTGAGCCTTGGTATGGAAACTTAC-TAAGTGATAACTTTCAAATTCAGAGAAACCCTGGAAT-TAATAGAAA----GGGCAATCCTGAGCCAAATCC---TTTTT------------ATAATTTT-------------ATAAAAAAC--TTAAGGA---------GAGGTGCAGAGACTCAACGGAAGCTTTTCT--AACCAACG-------CAAAA-T---------CAAGATCTTT-TTACCAA-----AAACTGA-TTAGAGAATAAAGAGAGAGTCCGTTTCTACATGTAAAC---ATGGACAGTAATGAAATTTT-CAGT--AGGAA-GAAAATCCGTCGATTTG-------AAAAATCGTGAGGGTTCAAGTCCCTCTATCCCCAAAAACCT-----CTGTTGGTACTTGGT---------TCAAATGGGAAA------TTGCCTTT-------------TTAGCGTGCAATCCCCTTC-------------------TTATTGGTTTCATTTCTCTTCAATA--------------AAATTT-AGGATTAGAATC-------------------TATAGGGGGAAATG-GGTCGGGATAGCTCAGTCGGTAGAGCAGAGGACTGAAAATCCTC----------------- Cuscuta_gronovii_194_453_467_705 -----------GACGGTACGGACTTAATTGGATTGAGCCTTGGTATGGAAACTTAC-TAAGTGATAACTTTCAAATTCAGAGAAACCCTGGAAT-TAATAGAAA----GGGCAATCCTGAGCCAAATCC---TTTTT------------ATAATTTT-------------ATAAAAAAC--TTAAGGA---------GAGGTGCAGAGACTCAACGGAAGCTTTTCT--AACCAACG-------CAAAA-T---------CAAGATCTTT-TTACCAA-----AAACTGA-TTAGAGAATAAAGAGAGAGTCCGTTTCTACATGTAAAC---ATGGACAGTAATGAAATTTT-CAGT--AGGAA-GAAAATCCGTCGATTTG-------AAAAATCGTGAGGGTTCAAGTCCCTCTATCCCCAAAAACCT-----CTGTTGGTACTTGGT---------TCAAATGGGAAA------TTGCCTTT-------------TTAGCGTGCAATCCCCTTC-------------------TTATTGGTTTCATTTCTCTTCAATA--------------AAATTT-AGGATTAGAATC-------------------TATAGGGGGAAATG-GGTCGGGATAGCTCAGTCGGTAGAGCAGAGGACTGAAAATCCTCGTGTCACCA-------- Cuscuta_gracillima_621 --------------GCTACGGACTTAATTGGATTGAGCCTTGGTATGGAAACTTAC-TAAGTGATCACTTTCAAATTCAGAGAAACCCTGGAAG-AAAGAAAAG----GGGCAATCCTGAGCCAAATCCCTTTTTATTTC---------ATAAAATT-------------ATAAAAAA---CTAAGGA---------TAGGTGCAGAGACTCAACGGAAGCTTTTCT--AACAAATG-------GAAAA-AATAGGTTG-ATAAATATTT-TTAA--------AAACTTA-TTTGAGAATAAAGAGAGAGTCCTTTTCCACATATCAAT---ACAGATACCAATGAAATTTT-CAGT--AAGAA-GAAAATCCGTGGATTTT-------AAAAATCGTGAGGGTTCAAGTCCCTCTATCCCCAAAGGTGT-----GACAAACTGATATTATGCTGGCCCCCTTTTTTCAT-TTGGTTAG-GAATTG-------TTCAAAT-TTATACTCCCCTTTT---------------------------AGTTTTTTCATTGCCT-----------------------AAAATTTAC-------------------------ATTAGGAAATGAAGTCGGGATAGCTCAGCCGGTAGAGCAGAGGACTGAAAATCCTCGTGTCAC---------- Cuscuta_gracillima_599_600_620 ----------TGACGCTACGGACTTAATTGGATTGAGCCTTGGTATGGAAACTTAC-TAAGTGATCACTTTCAAATTCAGAGAAACCCTGGAAT-AAAGAAAAG----GGGCAATCCTGAGCCAAATCCCTTTTTATTTT---------ATAAAATT-------------ATAAAAAA---CTAAGGA---------TAGGTGCAGAGACTCAACGGAAGCTTTTCT--AACAAATG-------GAAAA-AATAGGTTG-ATAAATATTT-TTAA--------AAACTTA-TTTGAGAATAAAGAGAGAGTCCTTTTCTACATATCAAT---ACAGATACCAATGAAATTTT-CAGT--AAGAA-GAAAATCCGTGGATTTT-------AAAAATCGTGAGGGTTCAAGTCCCTCTATCCCCAAAGGTGT-----GACAAACTGATATTATGCTCGCCCCCTTTTTTCAT-TTGGTTAG-GAATTG-------TTCAAAT-TTATACTCCCCTTTT---------------------------AGTTTTTTCATTGCCT-----------------------AAAATTTAC-------------------------ATTAGGAAATGAAGTCGGGATAGCTCAGCCGGTAGAGCAGAGGACTGAAAATCCTCGTGTCACCAA------- Cuscuta_glomerata_597_598 -------------CGCTACGGACTTAATTGGATTGAGCCTTGGTATGGAAACTTAC-TAAGTGATCACTTTCAAATTCAGAGAAACCCTGGAAT-TAATAGAAA----GGGCAATCCTGAGCCAAATCC---TTTTT------------ATAATTTT-------------ATAAAAAAC--TTAAGGA---------GAGGTGCAGAGACTCAACGGAAGCTTTTCT--AACCAACG-------TAAAA-T---------AAAGATCTTT-TTACCAA-----AAACTGA-TTAGAGAATAAAGAGAGAGTCCGTTTCTACATGTAAAC---ATGGACAGTAATGAAATTTT-CAGT--AGGAA-GAAAATCCGTCGATTTG-------AAAAATCGTGAGGGTTCAAGTCCCTCTATCCCCAAAAACCT-----CTGTTGGTACTTGGT---------TCAAATGGGAAA------TTGCCTTT-------------TTATCGTGCAATCCCCTTC-------------------TTATTGGTTTCATTTCTCTTCAATA--------------AAATTG-AGGATTAGAATC-------------------TATAGTGGGAAATG-GGTCGGGATAGCTCAGTCGGTAGAGCAGAGGACTGAAAATCCTCGTGTCACCAA------- Cuscuta_glomerata_462_619 -----------GACGCTACGGACTTAATTGGATTGAGCCTTGGTATGGAAACTTAC-TAAGTGATCACTTTCAAATTCAGAGAAACCCTGGAAT-TAATAGAAA----GGGCAATCCTGAGCCAAATCC---TTTTT------------ATAATTTT-------------ATAAAAAAC--TTAAGGA---------GAGGTGCAGAGACTCAACGGAAGCTTTTCT--AACCAACG-------CAAAA-T---------AAAGATCTTT-TTACCAA-----AAACTGA-TTAGAGAATAAAGAGAGAGTCCGTTTCTACATGTAAAC---ATGGACAGTAATGAAATTTT-CAGT--AGGAA-GAAAATCCGTCGATTTG-------AAAAATCGTGAGGGTTCAAGTCCCTCTATCCCCAAAAACCT-----CTGTTGGTACTTGGT---------TCAAATGGGAAA------TTGCCTTT-------------TTATCGTGCAATCCCCTTC-------------------TTATTGGTTTCATTTCTCTTCAATA--------------AAATTG-AGGATTAGAATC-------------------TATAGTGGGAAATG-GGTCGGGATAGCTCAGTCGGTAGAGCAGAGGACTGAAAATCCTCGTGTCACCAAATAAA-- Cuscuta_globulosa ----------------------------TGGATTGAGCCTTAGTATGGAAACTTAC-TATGTGATCACTTTCAAATTCAGAGAAACCCTGGAAT-GAATACAAA----GGGCAATCCTGAGCCAAATCC---TTATTT-----------ATA-ATTTATAAAA-------ATAAAAAAA--CTAAGGA---------GAGGTGCAGAGACTCAACGGAAGCTTTTCT--AACCAATG-------CAAAA-AAAGAATCTGATAGATCTCT-TTACCAC-----AAACTGA-TTAGAGAATAAAGAGAGAGTCCTTTTCTACATGTCAAT---ATGGGCAGTAATGAAATTTT-CAGT--ATGAA-GAAAATCCGTCGATTTG-------AAAAATCGTGAGGGTTCAAGTCCCTCTATCCCCACAAACTG-----------CTCT-CTGC----TTTTTTTCAT-TTGCTTGGTGCATGGTTC-------------AAA--------CAATCTTTTTGT--------------------------TATGGGTTTCATTTCCC--------------GTAAT-ATAATTAATAATTAGAATC------------TACAGTGGGAAATG-GGTCGGGATAGCTCAGTCGGTAGAGCAGAGGACTGAAAATCCTCGTGTCACCA-------- Cuscuta_glabrior_825 ----------TGACGCTACGGACTTAATTGGATTGAGCCTTGGTATGGAAACTTAC-TAAGTGATCACTTTCAAATTCAGAGAAACCCTGGAAT-TAATAAAAA----GGGCAATCCTGAGCCAAATCC---TTTTT------------AGAAT-----------------AAAAAAAA--CTAAGGA---------AAGGTGCAGAGACTCAACGGAAGCTTTTCT--AACCAATG-------TGAAA-----------ATATATTTTT-TTACC-------AAGCTGA-TTAAAGAATAAAGAGAGAGTCCGTTTCTACATGTCAAT---ATGGACAGTAATGAAATTTT-CAGT--AAGAA-GAAAATCCGTCGATTTG-------AAAAATTGTGAGGGTTCAAGTCCCTCTATCCCCAAAAGCCC-----AACAAACTACTCTCT-----------GCTTGGTACTTT-TGTC--------------------TCAACGTGCACTCCCCTT---------------------TATTGGTTTCATTTCCCTTCAATC--------------TAATCT-CGAATTTGAATC-------------------TACAGTGGGAAATG-GGTCGGGATAGCTCAGGCGGTAGAGCAGAGGACTGAAAATCCTCGTGTCACCAA------- Cuscuta_glabrior_742 ----------TGACGCTACGGACTTAATTGGATTGAGCCTTGGTATGGAAACTTAC-TAAGTGATCACTTTCAAATTCAGAGAAACCCTGGAAT-TAATAAAAA----GGGCAATCCTGAGCCAAATCC---TTTTT------------AGAAT-----------------AAAAAAAA--CTAAGGA---------AAGGTGCAGAGACTCAACGGAAGCTTTTCT--AACCAATG-------TGAAA-----------ATATATTTTT-TTACC-------AAGCTGA-TTAAAGAATAAAGAGAGAGTCCGTTTCTACATGTCAAT---ATGGACAGTAATGAAATTTT-CAGT--AAGAA-GAAAATCCGTCGATTTG-------AAAAATTGTGAGGGTTCAAGTCCCTCTATCCCCAAAAGCCC-----AACAAACTACTCTCT-----------GCTTGGTACTTT-TGTC--------------------TCAACGTGCACTCCCCTT---------------------TATTGGTTTCATTTCCCTTCAATC--------------TAATCT-CGAATTTGAATC-------------------TACAGTGGGAAATG-GGTCGGGATAGCTCAGGCGGTAGAGCAGAGGACTGAAAATCCTCGTGTCACCAA------- Cuscuta_glabrior_596 ----------TGACGCTACGGACTTAATTGGATTGAGCCTTGGTATGGAAACTTAC-TAAGTGATCACTTTCAAATTCAGAGAAACCCTGGAAT-TAATAAAAA----GGGCAATCCTGAGCCAAATCC---TTTTT------------AGAAT-----------------AAAAAAAA--CTAAGGA---------AAGGTGCAGAGACTCAACGGAAGCTTTTCT--AACCAATG-------TGAAA-----------ATATATTTTT-TTACC-------AAGCTGA-TTAAAGAATAAAGAGAGAGTCCGTTTCTACATGTCAAT---ATGGACAGTAATGAAATTTT-CAGT--AAGAA-GAAAATCCGTCGATTTG-------AAAAATTGTGAGGGTTCAAGTCCCTCTATCCCCAAAAGCCC-----AACAAACTACTCTCT-----------GCTTGGTACTTT-TGTC--------------------TCAACGTGCACTCCCCTT---------------------TATTGGTTTCATTTCCCTTCAATC--------------TAATCT-CGAATTTGAATC-------------------TACAGTGGGAAATG-GGTCGGGATAGCTCAGGCGGTAGAGCAGAGGACTGAAAATCCTCGTGTCACCAA------- Cuscuta_desmouliniana_571 ----------------TACGGACTTAATTGGATTGAGCCTTGGTATGGAAACTTAC-TAAGTGATCACTTTCAAATTCAGAGAAACCCTGGAAC-AAATAAATG----GGGCAATCCTGAGCCAAATCC---TTTATT-----------CTTTTATT-------------CTAAAAAA---CTAAGGA---------TAGGTGCAGAGACTCAACGGAAGCTTTTCT--AACAAAGG-------CAAAA-AGAGCGTAT---------TT-TTAC--------AAA-----TTCGAGAATAAAGAGAGAGTCCTTTTCTACATGTCAAT---ATAGACAGCAATGAAATTTTTACGT--AATAA-GAAAATCCGTGGATTTG-------AAAAATCGTGAGGGTTCAAGTCCCTCTATCCCCATAGGCTA-----CTATGCCTTTAG-T-TGC------------------------ATTTAGTTTAGGA------AATTTGAAAAAACCCTTTCT-------AATTTGTACTTCCCTTTTAGTTTATTGATTGCCTTTCCTTGTCC---------ATAAT-AAAATTTAATTT-------------------TCGATTAGGAAATC-GGTCGGGATAGCTCAGCCGGTAGAGCAGAGGACTGAAAATCCTCGTGTCAC---------- Cuscuta_desmouliniana_1161 ----------------TACGGACTTAATTGGATTGAGCCTTGGTATGGAAACTTAC-TAAGTGATCACTTTCAAATTCAGAGAAACCCTGGAAC-AAATAAATG----GGGCAATCCTGAGCCAAATCC---TTTATT-----------CTTTTATT-------------CTAAAAAA---CTAAGGA---------TAGGTGCAGAGACTCAACGGAAGCTTTTCT--AACAAAGG-------CAAAA-AGAGCGTAT---------TT-TTAC--------AAA-----TTCGAGAATAAAGAGAGAGTCCTTTTCTACATGTCAAT---ATAGACAGCAATGAAATTTTTACGT--AATAA-GAAAATCCGTGGATTTG-------AAAAATCGTGAGGGTTCAAGTCCCTCTATCCCCATAGGCTA-----CTATGCCTTTAG-T-TGC------------------------ATTTAGTTTAGGA------AATTTGAAAAAACCCTTTCT-------AATTTGTACTTCCCTTTTAGTTTATTGATTGCCTTTCCTTGTCC---------ATAAT-AAAATTTAATTT-------------------TCGATTAGGAAATC-GGTCGGGATAGCTCAGCCGGTAGAGCAGAGGACTGAAAATCCTCGTGTCAC---------- Cuscuta_denticulata_668 -----------------------TTAATTGGATTGAGCCTTGGTATGGAAACTTAC-TAAGTGATAACTTTCAAATTCAGAGAAACCCTGGAAT-TAATACAAA----GGGCAATCCTGAGCCAAATCCTTTTTTTATATTGATAATTGATAATTTT-------------CGAAAAAAC--CTAAGGA---------GAGGTGCAGAGACTCAACGGAAGCTTTTCT--AACCAATG-------CAAAA-A-----------ATAGTTTT-TTACTACC----AATATGA-TTAGAGAATAAAGAGAGAGTCCTTTTCGACATGTCCAT---GTCGACAGTAATGAAATTTT-CAGTTAAAGAA-GAAAATCCGTCGATTTT-------TAAAATCATGAGGGTTCAAGTCCCTCTATCCCCAAAAGCCT-----CAAACACTACTCTCG----TTG-----------AAAGAGGAAACAACTTT-------------TGAATGTGCAATCCCC------------------------------ATATTATTACTTCAATA--------------AAATTT-AGAATTAGAATC-------------------AAGAGTAGGAAATG-AGTCGGGATAGCTCAGTCGGTAGAGCAGAGGA----------------------------- Cuscuta_denticulata_485 --------------------GACTTAATTGGATTGAGCCTTGGTATGGAAACTTAC-TAAGTGATAACTTTCAAATTCAGAGAAACCCTGGAAT-TAATACAAA----GGGCAATCCTGAGCCAAATCCTTTTTTTATATTGATAATTGATAATTTT-------------CGAAAAAAC--CTAAGGA---------GAGGTGCAGAGACTCAACGGAAGCTTTTCT--AACCAATG-------CAAAA-A-----------ATAGTTTT-TTACTACC----AATATGA-TTAGAGAATAAAGAGAGAGTCCTTTTCGACATGTCCAT---GTCGACAGTAATGAAATTTT-CAGT--AAGAA-GAAAATCCGTCGATTTT-------TAAAATCATGAGGGTTCAAGTCCCTCTATCCCCAAAAGCCT-----CAAACACTACTCTCG----TTG-----------AAAGAGGAAACAACTTT-------------TTAATGTGCAATCCCC------------------------------ATATTATTCCTTCAATA--------------AAATTT-AGAATTAGAATC-------------------AAGAGTAGGAAATG-AGTCGGGATAGCTCAGTCGGTAGAGCAGAGGACTGAAAATCCTCG---------------- Cuscuta_denticulata_165 --------------------GACTTAATTGGATTGAGCCTTGGTATGGAAACTTAC-TAAGTGATAACTTTCAAATTCAGAGAAACCCTGGAAT-TAATACAAA----GGGCAATCCTGAGCCAAATCCTTTTTTTATATTGATAATTGATAATTTT-------------CGAAAAAAC--CTAAGGA---------GAGGTGCAGAGACTCAACGGAAGCTTTTCT--AACCAATG-------CAAAA-A-----------ATAGTTTT-TTACTACC----AATATGA-TTAGAGAATAAAGAGAGAGTCCTTTTCGACATGTCCAT---GTCGACAGTAATGAAATTTT-CAGT--AAGAA-GAAAATCCGTCGATTTT-------TAAAATCATGAGGGTTCAAGTCCCTCTATCCCCAAAAGCCT-----CAAACACTACTCTCG----TTG-----------AAAGAGGAAACAACTTT-------------TTAATGTGCAATCCCC------------------------------ATATTATTCCTTCAATA--------------AAATTT-AGAATTAGAATC-------------------AAGAGTAGGAAATG-AGTCGGGATAGCTCAGTCGGTAGAGCAGAGGACTGAAAATCCTCG---------------- Cuscuta_decipiens_981_1014 -----------GACGCTACGGACTTAATTGGATTGAGCCTTGGTATGGAAACGTAC-TAAGTGATTACTTTCAAATTCAGAGAAACCCTGGAAT-TAATAAAAT----GGGCAATCCTGAGCCAAATCC---TTTTT------------ATAAGCTT-------------CTAAAAAAA--CGAAGGA---------GAGGTGCAGAGACTCAACGGAAGCTTTTCTCTAACCAATG-------TGAAA-CGAGAGTCTGCTACATCTTT-TTACC-------AGACTCA-TTAGAGAATAAAGAGAGAGTCCGTTTCTACATGTCAAT---ATGGACAGTAATGAAATTTT-CAGT--AAGAA-GAAAATCCGTCGATTTC-------AAAAATCGTGAGGGTTCAAGTCCCTCTATCCCCAAAAGCCT-----AACAAATTACGCTCT-------------------------------------------------------GCAACGCCCTT-------------------------------TTTTCCCTTC------------------------------TCGAATC-------------------TACAGTGGGAAATT-GGTCGGGATAGCTCAGTTGGTAGAGCAGAGGACTGAAAATCCTCGTGTCACC--------- Cuscuta_decipiens_458 ------------------------------GATTGAGCCTTGGTATGGAAACGTAC-TAAGTGATTACTTTCAAATTCAGAGAAACCCTGGAAT-TAATAAAAT----GGGCAATCCTGAGCCAAATCC---TTTTT------------AGAAGCTT-------------CTAAAAAAA--CGAAGGA---------GAGGTGCAGAGACTCAACGGAAGCTTTTCTCTAACCAATG-------TGAAA-CGAGAGTCTGCTACATCTTT-TTACC-------AGACTCA-TTAGAGAATAAAGAGAGAGTCCGTTTCTACATGTCAAT---ATGGACAGTAATGAAATTTT-CAGT--AAGAA-GAAAATCCGTCGATTTC-------AAAAATCGTGAGGGTTCAAGTCCCTCTATCCCCAAAAGCCT-----AACAAATTACGCTCT-------------------------------------------------------GCAACGCCCTT-------------------------------TTTTCCCTTC------------------------------TCGAATC-------------------TACAGTGGGAAATC-GGTCGGGATAGCTCAGTTGGTAGAGCAGAGGACTGAAAATCCTC----------------- Cuscuta_cuspidata ------------------------------GATTGAGCCTTGGTATGGAAACTTAC-TAAGTGATCACTTTCAAATTCAGAGAAACCCTGGAAT-TAATAGAAA----GGGCAATCCTGAGCCAAATCC---TTTTTATATTTT-----ATAATTTT-------------ATAAAAAAC--TTAAGGA---------GAGGTGCAGAGACTCAACGGAAGCTTTTCT--AACCAACG-------CAAAA-T---------CAAGATCTTT-TTACCAA-----AAACTGA-TTAGAGAATAAAGAGAGAGTCCATTTCTACATGTAAAC---ATGGACAGTAATGAAATTTT-CAGT--AGGAA-GAAAATCCGTCGATTTG-------AAAAATCGTGAGGGTTCAAGTCCCTCTATCCCCAAAACCCT-----CTGTTGGTACTTGGT---------TCAAATGGGAAA------TTGCCTTT-------------TTATCGTGCAATCCCCTTC-------------------TTATTGGTTTCATTTCTCTTCAATA--------------AAATTT-AGGATTAGAATC-------------------TATAGTGGGAAATG-GGTCGGGATAGCTCAGTCGGTAGAGCAGAGGACTGAAAATCCTCGTGTCACCA-------- Cuscuta_cozumeliensis ----------------TACGGACTTAATTGGATTGAGCCTTGGTATGGAAACTTAC-TATGTGATCACTTTCAAATTCAGAGAAACCCTGGAAT-GAATACAAA----GGGCAATCCTGAGCCAAATCC---TTATTT-----------ATA-ATTTATAAAA-------ATAAAAAAA--CTAAGGA---------GAGGTGCAGAGACTCAACGGAAGCTTTTCT--AACCAATG-------CAAAA-AAAGAATCTGATAGATCTCT-TTACCAC-----AAACTGA-TTAGAGAATAAAGAGAGAGTCCTTTTCTACATGTCCAT---ATGGACAGTAATGAAATTTT-CAGT--ATGAA-GAAAATCCGTCGATTTG-------AAAAATCGTGAGGGTTCAAGTCCCTCTATCCCCACAAACTG-----------CTCT-CTGC----TTTTTTTCAT-TTGCTTGGTGCATGGTTC-------------AAA--------CAATCTTTTTGT--------------------------TATGGGTTTCATTTCCC--------------GTAAT-ATAATTAATAATTAGAATC------------TACAGTGGGAAATG-GGTCGGGATAGCTCAGTCGGTAGAGCAGAGGACTGAAAATCCTCGTG-------------- Cuscuta_costaricensis ---------------------------TTTGATTGAGCCTTGGTATGGAAACTTAC-TAAGTGATCACTTTCAAATTCAGAGAAACCCTGGAAT-GAATACACG----GGGCAATCCTGAGCCAAATCC---TTTTT---------------------------------ATAAAAAA-------GGA---------TAGGTGCAGAGACTCAACGGAAGCTTTTCT--AACCAATG-------CA----------TCTGATATATCTTT-TTATCAA-----AACTTGA-TTCGAGAATAAAGAGAGAGTCCATTTCTACATGTCAAT---ATGGACAGTAATGAAATTTT-AAGT--AAGAA-GAAAATCCATCGATTTT-------GAAAATCGTGAGGGTTCAAGTCCCTCTATCCCCAAATGCCT-----AACAAACCG--ATCTTACACTCTCCGCTTTTTT-CATTTGGTT---------------TAAATGGGAACCGCCTT-------GCTTGTACCCACTATATAAATCTTATATTTTCAGACCCAGT------------------------ATTATTAGAATCT------------------TAACGTAGGAAATG-GGTCGGGATAGCTCAGCCGGTAGAGCAGAGGACTGAAAATCCT------------------ Cuscuta_corymbosa_stylosa ----------------------------------------TGGTATGGAAACTTAC-TAAGTGATCACTTTCAAATTCAGAGAAACCCTGGAAT-GAATACAAG----GGGCAATCCTGAGCCAAATCT---TTTTTT---------------TTTTA-----------------------CTAAGGATAAGGAGGATAGGTGCAGAGACTCAACGGAAGCTTTTCT--AACCAATG-------CAAAA-AGAGAGTCTGATAGATCTTT-TTATCAA-----AAACTGA-TTAGAGAATAAAGAGAGAGTCCTTTTTTACATGTCAAT---ATGGACAGTAATGAAATTTT-TAGT--AAGAA-GAAAATCCGTTGATTTG-------AAAAATCGTGAGGGTTCAAGTCCCTCTATCCCCAAATGCCT-----AACAAACTCCTATC--ACGCTCTCCGCTTTTTTTCATTTGGTTGGTGCTTGGTTCAAATGAGAAACGCCTTTTTTTAATTTGCAATCCCCT-TTATTAGTTTCATTTCCCTTCCTTGCCCCTAATC----------------------TAATTCGAAGC-------------------TACAGTAAGAAATG-GGTCGGGATAGCTCAGCCGGTAGAGCAGAGGACTGAAAATCCTC----------------- Cuscuta_corymbosa_grandiflora_959 ----------------TACGGACTTAATTGGATTGAGCCTTGGTATGGAAACTTAC-TAAGTGATCACTTTCAAATTCAGAGAAACCCTGGAAT-AAATACAAG----GGGCAATCCTGAGCCAAATCT---TTTTTT---------------TTTT-------------ATAAAAAAAA-CTAAGGATAAGGAGGATAGGTGCAGAGACTCAACGGAAGCTTTTCT--AACCAATG-------TAAAA-AGAGAGTCTGATAGATCTTT-TTATTATTAT--AAACTGA-TTAGAGAATAAAGAGAGAGTCCTTTTTTACATGTCAATT--ATGGACAGTAATGAAATTTT-GAGT--AAGAA-GAAAATCCGTTGATTTG-------AAAAATCGTGAGGGTTCAAGTCCCTCTATCCCCAAACGCCT-----AAAAAACTCCTATC--ATGCTCTCCGCTTTTTTT------------------------------------------AATTTGCAATCCCC--TTATTAGTTTCATTTGCCTTCCTTGTCCCTAATC----------------------TAATTCGAAGC-------------------TACAGT------------CGGGATAGCTCACCCGGTA--------------------------------------- Cuscuta_corymbosa_grandiflora_695_696 ------------------------TAATTGGATTGAGCCTTGGTATGGAAACTTAC-TAAGTGATCACTTTCAAATTCAGAGAAACCCTGGAAT-GAATACAAG----GGGCAATCCTGAGCCAAATCT---TTTTTT----------------TT--------------ATAAAAAAAA-CTAAGGATAAGGAGGATAGGTGCAGAGACTCAACGGAAGCTTTTCT--AACCAATG-------TAAAA-AGAGAGTCTGATAGATCTTT-TTATTAT-----AAACTGA-TTAGAGAATAAAGAGAGAGTCCTTTTTTACATGTCAATT--ATGGACAGTAATGAAATTTT-GAGT--AAGAA-GAAAATCCGTTGATTTG-------AAAAATCGTGAGGGTTCAAGTCCCTCTATCCCCAAACGCCT-----AAAAAACTCCTATC--ATGCTCTCCGCTTTTT------------------------------------------TTAATTTGCAATCCCC--TTATTAGTTTCATTTGCCTTCCTTGTCCCTAATC----------------------TAATTCGAAGC-------------------TACAGT------------CGGGATAGCTCAGCCGGTAGAGCAGAGGACTGAAAATCCTCGT--------------- Cuscuta_coryli --------------------GACTTAATTGGATTGAGCCTTAGTATGGAAACTTAC-TAAGTGATCACTTTCAAATTCAGAGAAACCCTGGAATTAAAGAAAAT----GGGCAATCCTGAGCCAAATC----TTT-----------------------------------------------TAAGGA---------TAGGTGCAGAGACTCAAAGGAAGCTTTTCT--AACAAATG-------CAAGT-----------------------------------CACTAA-TTTGAGAATAAAGAGAGAGTCCTTTTCTACGTGTCAAT---ACAGATAGTAATGAAATTTT-CAGT--AAGAA-GAAAATCCGTGGATTTT-------AAAAATCGTGAGGGTTCAAGTCCCTCTATCCCCACAAAATA-----CTATTCCGCTCACCA--CCTTTCTTTTATTTTCAG-TTGGTT------------------CAAATAAAAAAAAGCCCTTCT--------------------------CAGTTTTGTTTTACTCTCCTA--------------------------------------------TTAGTTACCTAAAGGAAATGAAGTCGGGATAGCTCAGCCGGTAGAGCAGAGGACTGAAAATCCTCGTGTCACCA-------- Cuscuta_corniculata -----------------------TTAATTGGATTGAGCCTTGGTATGGAAACTTAC-TAAGTGATCACTTTCAAATTCAGAGAAACCCTGGAAT-TAATAAAAA----GGGCAATCCTGAGCCAAATCC---TTGTT------------AGAATTTT-------------ATAAAAAAA--CTAAGGA---------AAGGTGCAGAGACTCAACGGGAGCTTTTCT--AACCAATT-------TAAAA-AAAGAGTCTGATATATCTTT-TTACC-------AAACTGA-TTAGAGAATAAAGAGAGAGTCCGTTTCTACATGTCAAT---ATGGACAGTAATGAAATTTT-CAGT--AAGAA-GAAAATCCGTTGATTTT-------AAAAATCGTGAGGGTTCAAGTCCCTCTATCCCCAAAAACCT-----AACAAATTACGCTCT-----------GCTTGGTACTTT--------------GGTT----CAAATGGGAACCGCCTTTTTTTAATGTGCACTCCCCTTT---TA--------------------------------------------------------------------------------------TG-GGTCGGGATAGCTCAGTCGGTAGAGCAGAGGACTGAAAATCCTCGTG-------------- Cuscuta_compacta CGAAATCGGTAGACGCTACGGACTTAATTGGATTGAGCCTTGGTATGGAAACTTAC-TAAGTGATCACTTTCAAATTCAGAGAAACCCTGGAAT-TAATAGAAA----GGGCAATCCTGAGCCAAATCC---TTTTT------------CTAATTTT-------------ATAAAAAAC--TTAAGGA---------GAGGTGCAGAGACTCAACGGAAGCTTTTCT--AACCAACG-------CAAAA-T---------CAAGATCTTT-TTACCAA-----AAACTGA-TTAGAGAATAAAGAGAGAGTCCGTTTCTACATGTAAAC---ATGGACAGTAATGAAATTTT-CAGT--AGGAA-GAAAATCCGTTGATTTGAAAATTGAAAAATCGTGAGGGTTCAAGTCCCTCTATCCCCAAAAC------------TGGTACT-----------------ATGGGAAA-------TGCCTTT-------------TTAGCGTGCAATCCCCTTC-------------------TTATTGGTTTTATTTCTCTTCAATA--------------AAATTT-AGGATTAGAATC-------------------TATAGTGGGAAATG-GGTCGGGATAGCTCAGTCGGTAGAGCAGAGGACTGAAAATCCTCGTGTCACCAGTTCAAAT Cuscuta_colombiana ----------TGACGCTACGGACTTAATTGGATTGAGCCTTGGTATGGAAACTTAA-TAAGTGATCACTTTCAAATTCAGAGAAACCCTGGAAT-AAAGAAAAG----GGGCAATCCTGAGCCAAATTCTTTTTTATTTT------------------------------ATAAAAAA---CTAAGGA---------TAGGTGCAGAGACTCAACGGAAGTTTTTCT--AACAAATG-------GAAAA-AATAGGTTG-ATAAATATTT-TTAA--------AAACTTA-TTTGAGAATAAAGAGAGAGTCCTTT---------CAAT---ACAGATACCAATGAAATTTT-CAGT--AAGAA-GAAAATCCGTGGATTTT-------AAAAATCGTGAGGGTTCAAGTCCCTCTATCCCCAAAGGTGT-----GACAAACTTATATTAAGCTCGCCCCCTTTTTTCAT-TTGGTTTCGAAAAAG---GCCTTTCAAAT-TTATACTCCCATTTT---------------------------AGTTTTTTCATTGCCT-----------------------AAAATTTAC-------------------------ATTAGGAAATGAAGTCGGGATAGCTCAGCCGGTACAKCATAGGACTGAAAATCCTCGTGTCACCAATTAAGT- Cuscuta_chinensis_837 -----------------------------------------------------------AGTGATCACTTTCAAATTCAGAGAAACCCTGGAAT-GAATACAAA----GGGCAATCCTGAGCCAAATCC---TTCTT------------ATACTCTT-------------ATAAAAAAA--CTAAGGA---------GAGGTGCAGAGACTCAACGGAAGCTTTTCT--AACCAATG-------CAAAA-AGAGAGTCTGATAGATCTTT-TTACC-------AAACTGA-TTAGAGAATAAAGAGAGAGTCCTTTTCTACATGTCAAT---ATGGGCAGTAATGAAATTTT-CAGT--AAGAA-GAAAATCCGTCGATTTG-------AAAAATCATGAGGGTTCAAGTCCCTCTATCCCCAAACGCCT-----AAAAAATTGCTCTCT---CTATTTTTTTTTTT-CAT-TTGGTTGGTGATCGGTTT------AAATGGGAAACGTCCCTTTTTAACTTACAATTTCC-GGTTTCATTTCCTTTGCTTGTCCCTAATC--------------TAATTT-AGAATTAAAATAGAAAATA------------TGCAATAGGAGATG-GGTCGGGATAG-------------------------------------------------- Cuscuta_chinensis_459 -----------------------TTAATTGGATTGAGCCTTGGTATGGAAACTTAC-TAAGTGATCACTTTCAAATTCAGAGAAACCCTGGAAT-GAATACAAA----GGGCAATCCTGAGCCAAATCC---TTCTT------------ATACTCTT-------------ATAAAAAAA--CTAAGGA---------GAGGTGCAGAGACTCAACGGAAGCTTTTCT--AACCAATG-------CAAAA-AGAGAGTCTGATAGATCTTT-TTACC-------AAACTGA-TTAGAGAATAAAGAGAGAGTCCTTTTCTACATGTCAAT---ATGGACAGTAATGAAATTTT-CAGT--AAGAA-GAAAATCCGTCGATTTG-------AAAAATCATGAGGGTTCAAGTCCCTCTATCCCCAAACGCCT-----AAAAAATTGCTCTCT---CTATTTTTTTTTTT-CAT-TTGGTTGGTGATCGGTTT------AAATGGGAAACGTCCCTTTTTAACTTACAATTTCC-GGTTTCATTTCCTTTGCTTGTCCCTAATC--------------TAATTT-AGAATTAAAATAGAAAATA------------TGCAATAGGAGATG-GGTCGGGATAGCTCAGTGGGTAAAGCAAAGGACTGAAAATC-------------------- Cuscuta_chapalana ----------------TACGGACTTAATTTTATTGAGCCTTGGTATGGAAACTTAC-TAAGTGATCACTTTCAAATTCAGAGAAACCCTGGAAT-GAATACACG----GGGCAATCCTGAGCCAAATCC---TTTTTT-----------TATATTTT-------------ATATCAAA-----AAGGA---------TAGGTGCAGAGACTCAACGGAAGCTTTTCT--AACCAATG-------CAAAA-AGAGAGTCTGATAGATATTT-TTATCAAACTTGATTCAAGAATAAAGAATAAAGAGAGAGTCCTTTTCTACATGTCAAT---ATGGACAGTAATGAAATTTTTTAGT--AAAAA-GAAAATCCGTTGATTTT-------GAAAATCGTGAGGGTTCAAGTCCCTCTATCCCCAAATGACT-----AACAAAATG--TTATCACGCTCTCCGCTTTTTTTTTT-CATTTGGTTGGTACTTGGTTCAAATGGGAAACGCCTTTATTTT-------GATTTGCAATCCCCATTTATGGATTTCATTTCCCTTGCTTGTCC---------CTAAT-ATAATTAGAGTA-------------------TACAGTAGGAGATG-AGTCGGGATAGCTCAGCCGGTACAGCAGAGGACTGAAAA---------------------- Cuscuta_cf._cozumeliensis -----------GACGCTACGGACTTAATTGGATTGAGCCTTGGTATGGAAACTTAC-TATGTGATCACTTTCAAATTCAGAGAAACCCTGGAAT-GAATACAAA----GGGCAATCCTGAGCCAAATCC---TTATTT-----------ATATATTTATAATAGATATTTATAAAAAAA--CTAAGGA---------GAGGTGCAGAGACTCAACGGAAGCTTTTCT--AACCAATG-------CAAAA-AAAGAATCTGATAGATCTCT-TTACCAC-----AAACTGA-TTAGAGAATAAAGAGAGAGTCCTTTTCTACATGTCAAT---ATAGACAGTAATGAAATTTT-CAGT--ATGAA-GAAAATCCGTTGATTTG-------AAAAATCGTGAGGGTTCAAGTCCCTCTATCCCCACAA------------------------------------------TTTGGTGCATGGTTC-------------AAA--------CAATCTTTTTGT--------------------------TATGGGTTTCATTTCCCGTAATA--TA----GTAAT-ATAATTAATAATTAGAATCT-----------TACAGTAGGAAATG-GGTCGGGATAGCTCAGTCGGTAGAGCAGAGGACTGAAAATCCTCGTGTCACC--------- Cuscuta_cephalanthi ----------TGACGCTACGGACTTAATTGGATTGAGCCTTGGTATGGAAACTTAC-TAAGTGATCACTTTCAAATTCAGAGAAACCCTGGAAT-TAATAGAAA----GGGCAATCCTGAGCCAAATC--------------------------TTT-------------ATAAAAAAC--TTAAGGA---------GAGGTGCAGAGACTCAACGGAAGCTTTTCT--AACCAACG-------CAAAA-T---------CAAGATCTTT-TTACCAA-----AAAATGA-TTAGAGAATAAAGAGAGAGTCCTTTTCTACATGTAAAC---ATGTACAGTAATGAAATTTT-CAGT--AGGAA-GAAAATCCGTCGATTTG-------AAAAATCATGAGGGTTCAAGTCCCTCTATCCCCAAAACCC------CTGTTGGTACTTGGT---------TCAAATGGGAAA------TTGCCTTT-------------TTAGTGTGCAATCCCCTTC-------------------TTATTGGTTTCATTTATCTTCAATA--------------AAATTT-AGGATTAGAATC-------------------TATAGTGGGAAATG-GGTCGGGATAGCTCAGTCGGTAGAGCAGAGGACTGAAAATCCTCGTGTCACC--------- Cuscuta_campestris_894 -------------------------------ATTGAGCCTTGGTATGGAAACTTAC-TAAGTGATCACTTTCAAATTCAGAGAAACCCTGGAAT-TAATAAAAA----GGGCAATCCTGAGCCAAATCC---TTTTT------------AGAAT----------------AAAAAAAAA--CTAAGGA---------AAGGTGCAGAGACTCAACGGAAGCTTTTCT--AACCAATG-------TGAAA-----------ATATATTTTT-TTACC-------AAGCTGA-TTAAAGAATAAAGAGAGAGTCCGTTTCTACATGTCAAT---ATGGACAGTAATGAAATTTT-CAGT--AAGAA-GAAAATCCGTCGATTTG-------AAAAATTGTGAGGGTTCAAGTCCCTCTATCCCCAAAAGCCC-----AACAAACTACTCTCT-----------GCTTGGTACTTT-TGGC--------------------TCAACGTGCACTCCCCTT---------------------TATTGGTTTCATTTCCGTTCAATC--------------TAATCT-CGAATTTGAATC-------------------TACAGTGGGAAATG-GGTCGGGATAGCTCAGGCGGTAGAGCAGAGGACTGAAAATCC------------------- Cuscuta_campestris_487 --------------------GACTTAATTGGATTGAGCCTTGGTATGGAAACTTAC-TAAGTGATCACTTTCAAATTCAGAGAAACCCTGGAAT-TAATAAAAA----GGGCAATCCTGAGCCAAATCC---TTTTT------------AGAAT----------------AAAAAAAAA--CTAAGGA---------AAGGTGCAGAGACTCAACGGAAGCTTTTCT--AACCAATG-------TGAAA-----------ATATATTTTT-TTACC-------AAGCTGA-TTAAAGAATAAAGAGAGAGTCCGTTTCTACATGTCAAT---ATGGACAGTAATGAAATTTT-CAGT--AAGAA-GAAAATCCGTCGATTTG-------AAAAATTGTGAGGGTTCAAGTCCCTCTATCCCCAAAAGCCC-----AACAAACTACTCTCT-----------GCTTGGTACTTT-TGGC--------------------TCAACGTGCACTCCCCTT---------------------TATTGGTTTCATTTCCGTTCAATC--------------TAATCT-CGAATTTGAATC-------------------TACAGTGGGAAATG-GGTCGGGATAGCTCAGGCGGTA--------------------------------------- Cuscuta_campestris_483 -------------------GGACTTAATTGGATTGAGCCTTGGTATGGAAACTTAC-TAAGTGATCACTTTCAAATTCAGAGAAACCCTGGAAT-TAATAAAAA----GGGCAATCCTGAGCCAAATCC---TTTTT------------AGAAT----------------AAAAAAAAA--CTAAGGA---------AAGGTGCAGAGACTCAACGGAAGCTTTTCT--AACCAATG-------TGAAA-----------ATATATTTTT-TTACC-------AAGCTGA-TTAAAGAATAAAGAGAGAGTCCGTTTCTACATGTCAAT---ATGGACAGTAATGAAATTTT-CAGT--AAGAA-GAAAATCCGTCGATTTG-------AAAAATTGTGAGGGTTCAAGTCCCTCTATCCCCAAAAGCCC-----AACAAACTACTCTCT-----------GCTTGGTACTTT-TGGC--------------------TCAACGTGCACTCCCCTT---------------------TATTGGTTTCATTTCCGTTCAATC--------------TAATCT-CGAATTTGAATC-------------------TACAGTGGGAAATG-GGTCGGGATAGCTCAGGCGGTAGAGCAGAGGACTGAAAATCCTCT---------------- Cuscuta_campestris_411 -GAAATCGGTAGACGCTACGGACTTAATTAGATTGAGCCTTGGTATGGAAACTTAC-TAAGTGATCACTTTCAAATTCAGAGAAACCCTGGAAT-TAATAAAAA----GGGCAATCCTGAGCCAAATCC---TTTTT------------AGAAT----------------AAAAAAAAA--CTAAGGA---------AAGGTGCAGAGACTCAACGGAAGCTTTTCT--AACCAATG-------TGAAA-----------ATATATTTTT-TTACC-------AAGCTGA-TTAAAGAATAAAGAGAGAGTCCGTTTCTACATGTCAAT---ATGGACAGTAATGAAATTTT-CAGT--AAGAA-GAAAATCCGTCGATTTG-------AAAAATTGTGAGGGTTCAAGTCCCTCTATCCCCAAAAGCCC-----AACAAACTACTCTCT-----------GCTTGGTACTTT-TGGC--------------------TCAACGTGCACTCCCCTT---------------------TATTGGTTTCATTTCCGTTCAATC--------------TAATCT-CGAATTTGAATC-------------------TACAGTGGGAAATG-GGTCGGGATAGCTCAGGCGGTAGAGCAGAGGACTGAAAATCCTCGTGTCACCA-------- Cuscuta_campestris_202 ------------------CGGACTTAATTGGATTGAGCCTTGGTATGGAAACTTAC-TAAGTGATCACTTTCAAATTCAGAGAAACCCTGGAAT-TAATAAAAA----GGGCAATCCTGAGCCAAATCC---TTTTT------------AGAAT----------------AAAAAAAAA--CTAAGGA---------AAGGTGCAGAGACTCAACGGAAGCTTTTCT--AACCAATG-------TGAAA-----------ATATATTTTT-TTACC-------AAGCTGA-TTAAAGAATAAAGAGAGAGTCCGTTTCTACATGTCAAT---ATGGACAGTAATGAAATTTT-CAGT--AAGAA-GAAAATCCGTCGATTTG-------AAAAATTGTGAGGGTTCAAGTCCCTCTATCCCCAAAAGCCC-----AACAAACTACTCTCT-----------GCTTGGTACTTT-TGGC--------------------TCAACGTGCACTCCCCTT---------------------TATTGGTTTCATTTCCGTTCAATC--------------TAATCT-CGAATTTGAATC-------------------TACAGTGGGAAATG-GGTCGGGATAGCTCAGGCGGTAGAGCAGAGGACTGAAAATCCTCGTGTCACCAGTTCAAAT Cuscuta_californica_occidentalis ----------------------CTTAATTGGATTGAGCCTTGGTATGGAAACATACGTAAGTGAGCACTTTCAAATTCAGAGGAACCCTGGAAT-TAATGAAAT----GGGCAATCCTGAGCCAAATCC---TTTTT------------CGAATCTTATAAAAAA-----ATAAAAAAA--CGAAGGA---------GAGGTGCAGAGACTCAACGGAAGCTTTTCT--AACCTATA-------TGAAA-AAAGAGTCTGCTACATTTTT-ATACC-------AGACTTA-TGAGAGAATAAAGAGAGAGTCCGTTTTTACATGTCAAT---CTGGACAGTAATGGAATTTT-CAGT--AAGAA-GAAAATCCGTTGATTTG-------AAAAATCGTGAGGGTTCAAGTCCCTCTATCCCCAAAAGTCTCCTTACACAAATTATGCTAT-----------ACTTGGGAAA---CGCCTTT----------------TTTAACATGCACTGCCCTT--------------------TTATTGATTTCATTTTCCTTAAACA--------------AGATCT-ATCATCCGAATC-------------------TACAAGGGGAAATG-GGTCGGGATAGCTCAGTCGGTAGAGCAGAGGACTGAAAATC-------------------- Cuscuta_californica_brachycalyx ------------------------------GATTGAGCCTTGATATGGAAACATAA-TAAGTGATCACTTTCAAATTCAGAGAAACCCTGGAAT-TAATGAAAT----GGGCAATCCTGAGCCAAATCC---TTTTT------------AGAATCTT-------------CTAAAAAAA--CGAAGGA---------GAGGTGCAGAGACTCAACGGAAGCTTTTCT--AACCAATG-------TGAAA-AAAGAGTCTGCTACATCTTT-CTACC-------AGACTTA-TTAGAGAATAAAGAGAGAGTCCGTTTTTACATGTCAAT---CTGGACAGTAATGGAATTTT-CAGT--AAGAA-GAAAATCCGTTGATTTG-------AAAAATCGTGAGGGTTCAAGTCCCTCTATCCCCAAAAGCCT-----AACAAATTATGCTCT-----------GCTTGGGAAA---CGCCTTT--------------------------------------------------------TTTTGATTTCATTTTCCTTCAACA--------------AGATCT-ATGATCCGAATC-------------------TACAAGGGGAAATG-GGTCGGGATAGCTCAGTCGGTAGAGCAGAGGACTGAAAATCCTCGTGTCACC--------- Cuscuta_californica_637 ---------------------ACTTAATTGGATTGAGCCTTGGTATGGAAACATACGTAAGTGAGCACTTTCAAATTCAGAGGAACCCTGGAAT-TAATGAAAT----GGGCAATCCTGAGCCAAATCC---TTTTT------------CGAATCTTATAAAAAA-----ATAAAAAAA--CGAAGGA---------GAGGTGCAGAGACTCAACGGAAGCTTTTCT--AACCTATA-------TGAAA-AAAGAGTCTGCTACATTTTT-ATACC-------AGACTTA-TGAGAGAATAAAGAGAGAGTCCGTTTTTACATGTCAAT---CTGGACAGTAATGGAATTTT-CAGT--AAGAA-GAAAATCCGTTGATTTG-------AAAAATCGTGAGGGTTCAAGTCCCTCTATCCCCAAAAGTCT-------------------------------ACTTGGGAAA---CGCCTTT----------------TTTAACATGCACTGCCCTT--------------------TTATTGATTTCATTTTCCTTAAACA--------------AGATCT-ATCATCCGAATC-------------------TACAAGGGGAAATG-GGTCGGGATAGCTCATTCGGTAGAGCATAGGACTGA------------------------- Cuscuta_californica_147_499_645 -----------------------TTAATTGGATTGAGCCTTGATATGGAAACATAA-TAAGTGATCACTTTCAAATTCAGAGAAACCCTGGAAT-TAATGAAAT----GGGCAATCCTGAGCCAAATCC---TTTTT------------AGAATCTT-------------CTAAAAAAA--CGAAGGA---------GAGGTGCAGAGACTCAACGGAAGCTTTTCT--AACCAATG-------TGAAA-AAAGAGTCTGCTACATCTTT-CTACC-------AGACTTA-TTAGAGAATAAAGAGAGAGTCCGTTTTTACATGTCAAT---CTGGACAGTAATGGAATTTT-CAGT--AAGAA-GAAAATCCGTTGATTTG-------AAAAATCGTGAGGGTTCAAGTCCCTCTATCCCCAAAAGCCT-----AACAAATTATGCTCT-----------GCTTGGGAAA---CGCCTTT--------------------------------------------------------TTTTGATTTCATTTTCCTTCAACA--------------AGATCT-ATGATCCGAATC-------------------TACAAGGGGAAATG-GGTCGGGATAGCTCAGTCGGTAGAGCAGAGGACTGAAAATCCTCGTGTCACCAGTTCAAAT Cuscuta_burrelli ------------------------------GATTGAGCCTTGGTATGGAAACTTAC-TAAGTGATCACTTTCAAATTCAGAGAAACCCTGGAAT-AAATATAAA----GGGCAATCCTGAGCCAAATCC---TTTTTA------------GACTTTT-------------ATAAAAAAA--CTAAGGA---------GAGGTGCAGAGACTCAACGGAAGCTTTTCT--AACCAATG-------CAAAA-AA-GAA---------------------------AACCTGA-TTAGAGAATAAAGATAGAGTCCTTTTCGACATGTCAAT---ATGGACAGTAATGAAATTTT-CAGT--AAAAA-GAAAATCCGTCGATTTA-------AAAAATCGTGAGGGTTCAAGTCCCTCTATCCCCAAAAGCCT-----AAAAAACTAC----------TATTCTGCTTTCAACTAGG------AAA-------CGCCTTTTTTTAACTTGCAATCCCCTTA------------------TTATGGGTTTCATTTCCCTTC-------------------------ATAATTAGAATC-------------------TACAATA-GAAATG-GGTCGGGATAGCTCAGTCGGTAGAGCAGAGGACTGAAAATCCTCGGTC------------- Cuscuta_bifurcata -------------------GGAGTTAATTGTATTGAGCCTTTGTATGGAAACTTAC-TAAGTGATCACTTTCAAATTCAGAGAAACCCTGGAATTAATTAATAAAAAGGGGCAATCCTGAGCCAAATCC---TTTTT------------AGAAT-----------------AAAAAAAA--CTAAGGA---------GAGGTGCAGAGACTCAACGGAAGCTTTTCT--AACCAATG-------TGAAA-----------ATATATTTTT-TTACC-------AAGCTGA-TTAAAGAATAAAGAGAGAGTCCGTTTCTACATGTCAAT---ATGGACAGTAATGAAATTTT-CAGT--AAAAA-GAAAATCCGTCGATTTG-------AAAAATCATGAGGGTTCAAGTCCCTCTATCCCCAAAAGCCC-----AACAAACTACTCTCT-----------GCTTGGTACTTT-TGGCTCAAATTTT-----------TTAACGTGCACTACCCTT---------------------TATTGGTTTCATTTCCCTTCAATC--------------TAATCT-ACAATTTGAATC-------------------TCCAGTGGGAAATG-GGTCGGGATAGCTCAGTCGGTAGAGCAGAGGACTGAAAATCCTCGTGTCACCA-------- Cuscuta_australis_tinei_640 --------------GCTACGGACTTAATTGTATTGAGCCTTTGTATGGAAACTTAC-TAAGTGATCACTTTCAAATTCAGAGAAACCCGGGAAT-TAATAAAAA---GGGGCAATCCTGAGCCAAATCC---TTTTT------------AGAAT-----------------AAAAAAAA--CTAAGGA---------GAGGTGCAGAGACTCAACGGAAGCTTTTCT--AACCAATG-------TGAAA-----------ATATATTTTT-TTACC-------AAGCTGA-TTAAAGAATAAAGAGAGAGTCCGTTTCTACATGTCAAT---ATGGACAGTAATGAAATTTT-CAGT--AAAAA-GAAAATCCGTCGATTTG-------AAAAATCATGAGGGTTCAAGTCCCTCTATCCCCAAAAGCCC-----AACAAACTACTCTCT-----------GCTTGGTACTTT-TGGCTCAAATTTT-----------TTAACGTGCACTACCCTT---------------------TATTGGTTTCATTTCCCTTCAATC--------------TAATCT-ACAATTTGAATC-------------------TCCAGTGGGAAATG-GGTCGGGATAGCTCAGTCGGTAGAGCAGAGGACTGAAAATCCTCGTGT------------- Cuscuta_australis_tinei_639 --------------GCTACGGACTTAATTGTATTGAGCCTTTGTATGGAAACTTAC-TAAGTGATCACTTTCAAATTCAGAGAAACCCGGGAAT-TAATAAAAA---GGGGCAATCCTGAGCCAAATCC---TTTTT------------AGAAT-----------------AAAAAAAA--CTAAGGA---------GAGGTGCAGAGACTCAACGGAAGCTTTTCT--AACCAATG-------TGAAA-----------ATATATTTTT-TTACC-------AAGCTGA-TTAAAGAATAAAGAGAGAGTCCGTTTCTACATGTCAAT---ATGGACAGTAATGAAATTTT-CAGT--AAAAA-GAAAATCCGTCGATTTG-------AAAAATCATGAGGGTTCAAGTCCCTCTATCCCCAAAAGCCC-----AACAAACTACTCTCT-----------GCTTGGTACTTT-TGGCTCAAATTTT-----------TTAACGTGCACTACCCTT---------------------TATTGGTTTCATTTCCCTTCAATC--------------TAATCT-ACAATTTGAATC-------------------TCCAGTGGGAAATG-GGTCGGGATAGCTCAGTCGGTAGAGCAGAGGACTGAAAATCCTCGTGT------------- Cuscuta_australis_792 -------------CGCTACGGACTTAATTGTATTGAGCCTTTGTATGGAAACTTAC-TAAGTGATCACTTTCAAATTCAGAGAAACCCTGGAAT-TAATAAAAA---GGGGCAATCCTGAGCCAAATCC---TTTTT------------AGAAT------------------AAAAAAA--CTAAGGA---------GAGGTGCAGAGACTCAACGGAAGCTTTTCT--AACCAATG-------TGAAA-----------ATATATTTTT-TTACC-------AAGCTGA-TTAAAGAATAAAGAGAGAGTCCGTTTCTACATGTCAAT---ATGGACAGTAATGAAATTTT-CAGT--AAAAA-GAAAATCCGTCGATTTG-------AAAAATCATGAGGGTTCAAGTCCCTCTATCCCCAAAAGCCC-----AACAAACTACTCTCT-----------GCTTGGTACTTT-TGGCTCAAATTTT-----------TTAACGTGCACTACCCTT---------------------TATTGGTTTCAGTTCCCTTCAATC--------------TAATCT-ACAATTGGAATC-------------------TCCAGTGGGAAATG-GGTCGGGATAGCTCAGTCGGTAGAGCAGAGGACTGAAAATCCT------------------ Cuscuta_australis_679 ------------------CGGACTTAATTGTATTGAGCCTTTGTATGGAAACTTAC-TAAGTGATCACTTTCAAATTCAGAGAAACCCTGGAAT-TAATAAAAA---GGGGCAATCCTGAGCCAAATCC---TTTTT------------AGAAT------------------AAAAAAA--CTAAGGA---------GAGGTGCAGAGACTCAACGGAAGCTTTTCT--AACCAATG-------TGAAA-----------ATATATTTTT-TTACC-------AAGCTGA-TTAAAGAATAAAGAGAGAGTCCGTTTCTACATGTCAAT---ATGGACAGTAATGAAATTTT-CAGT--AAAAA-GAAAATCCGTCGATTTG-------AAAAATCATGAGGGTTCAAGTCCCTCTATCCCCAAAAGCCC-----AACAAACTACTCTCT-----------GCTTGGTACTTT-TGGCTCAAATTTT-----------TTAACGTGCACTACCCTT---------------------TATTGGTTTCAGTTCCCTTCAATC--------------TAATCT-ACAATTGGAATC-------------------TCCAGTGGGAAATG-GGTCGGGATAGCTCAGTCGGTAGAGCAGAGGACTGAAAATCCTCGTGT------------- Cuscuta_australis_547 ------------------CGGACTTAATTGTATTGAGCCTTTGTATGGAAACTTAC-TAAGTGATCACTTTCAAATTCAGAGAAACCCTGGAAT-TAATAAAAA---GGGGCAATCCTGAGCCAAATCC---TTTTT------------AGAAT------------------AAAAAAA--CTAAGGA---------GAGGTGCAGAGACTCAACGGAAGCTTTTCT--AACCAATG-------TGAAA-----------ATATATTTTT-TTACC-------AAGCTGA-TTAAAGAATAAAGAGAGAGTCCGTTTCTACATGTCAAT---ATGGACAGTAATGAAATTTT-CAGT--AAAAA-GAAAATCCGTCGATTTG-------AAAAATCATGAGGGTTCAAGTCCCTCTATCCCCAAAAGCCC-----AACAAACTACTCTCT-----------GCTTGGTACTTT-TGGCTCAAATTTT-----------TTAACGTGCACTACCCTT---------------------TATTGGTTTCAGTTCCCTTCAATC--------------TAATCT-ACAATTGGAATC-------------------TCCAGTGGGAAATG-GGTCGGGATAGCTCAGTCGGTAGAGCAGAGGACTGAAAATCCTCGTGT------------- Cuscuta_aurea ---------------------ACTTAATTGGATTGAGCCTTGGTATGGAAACTTAC-TAAGTGATCACTTTCAAATTCAGAGAAACCCTGGAAT-GAAGACAAT----GGGCAATCCTGAGCCAAATCC---TTTTT---------------------------------CGAAAAAAA--CTAAGGA---------GAGGTGCAGAGACTCAACGGAAGCTTTTCT--AACCAATA-------CAAGA-AGGGAGTCT-----------------------------TA-TTAGAGAATAAAGAGAGAGTCCTTTTCTACATGTCAAT---ATGGACAGTAATGAAATTTT-CAGT--AAGAA-GAAAATCCGTCGATTTT-------AAAAATCATGAGGGTTCAAGTCCCTCTATCCCCAAAGAATT-------------CCTCTCT--GCTTGG---------------GGGAACAGCTTTTT-----------TTAACTTGCAATCCCCT----------------------------TTTCTTGTTCCTTCAATA-------TACAATAGAATTT-ATAATTAGAATCTGCAA--------------TAGGAAAGGAAATA-GGTCGGGATAGCTCAGTCGGTAGAGCAGAGGACTGAAAATCCTC----------------- Cuscuta_ariesteguietae ----------TGACGCTACGGACTTAATTGGATTGAGCCTTGGTATGGAAACTTAA-TAAGTGATCACTTTCAAATTCAGAGAAACCCTGGAAT-AAAGAAAAG----GGGCAATCCTGAGCCAAATTCTTTTTTATTTT------------------------------ATAAAAAA---CTAAGGA---------TAGGTGCAGAGACTCAACGGAAGTTTTTCT--AACAAATG-------GAAAA-AATAGGTTG-ATAAATATTT-TTAA--------AAACTTA-TTTGAGAATAAAGAGAGAGTCCTTT---------CAAT---ACAGATACCAATGAAATTTT-CAGT--AAGAA-GAAAATCCGTGGATTTT-------AAAAATCGTGAGGGTTCAAGTCCCTCTATCCCCAAAGGTGT-----GACAAACTTATATTAAGCTCGCCCCCTTTTTTCAT-TTGGTTTCGAAAAAG---GCCTTTCAAAT-TTATACTCCCATTTT---------------------------AGTTTTTTCATTGCCT-----------------------AAAATTTAC-------------------------ATTAGGAAATGAAGTCGGGATAGCTCAGCCGGTACAKCATAGGACTGAAAATCCTCGTGTCACCAATTAAGT- Cuscuta_applanata_674 -------------------------------------------------------------------------AATTCAGAGAAACCCTGGAAT-GAATACAAA----GGGCAATCCTGAGCCAAATCC---TTCTT------------ATACTCTT-------------ATCAAAAAA--CTAAGGA---------GAGGTGCAGAGACTCAACGGAAGCTTTTCT--AACCAATG-------CAAAA-AGAGAGTCTGATAGATCTTT-TTACC-------AAACTGA-TTCGAGAATAAAGAGAGAGTCCTTTTCTACATGTCAAT---ATGGACAGTAATGAAATTTT-CAGT--AAGAA-GAAAATCCGTCGATTTG-------AAAAATCATGAGGGTTCAAGTCCCTCTATCCCCAAACGCCT-----AAAAAATTGCTCTCT---CTATTTTTTTTT---CAT-TTGGTTGGTGATCGGTTT------AAATGGGAAACGTCCCTTTTTAACTTGCAATTTCC-GGTTTCATTTCCTTTGCTTGTCCCTAATC--------------TAATTT-AGAATTAAAATAAAAAATA------------TGCAATAGGAGATG-GGTCGGGATAGCTCAGTGGGTAGAGCAGAGGACTGAAAATCCTCGTGTCACCA-------- Cuscuta_applanata_535 ----------------------------TGGATTGAGCCTTGGTATGGAAACTTAC-TAAGTGATCACTTTCAAATTCAGAGAAACCCTGGAAT-GAATACAAA----GGGCAATCCTGAGCCAAATCC---TTCTT------------ATACTCTT-------------ATAAAAAAA--CTAAGGA---------GAGGTGCAGAGACTCAACGGAAGCTTTTCT--AACCAATG-------CAAAA-AGAGAGTCTGATAGATCTTT-TTACC-------AAACTGA-TTCGAGAATAAAGAGAGAGTCCTTTTCTACATGTCAAT---ATGGACAGTAATGAAATTTT-CAGT--AAGAA-GAAAATCCGTCGATTTG-------AAAAATCATGAGGGTTCAAGTCCCTCTATCCCCAAACGCCT-----AAAAAATTGCTCTCT---CTATTTTTTTTTTT-CAT-TTGGTTGGTGATCGGTTT------AAATGGGAAACGTCCCTTTTTAACTTGCAATTTCC-GGTTTCATTTCCTTTGCTTGTCCCTAATC--------------TAATTT-AGAATTAAAATAAAAAATA------------TGCAATAGGAGATG-GGTCGGGATAGCTCAGTGGGTAAAGCAAAGGACTGA------------------------- Cuscuta_applanata_508 ---------------CTACGGACTTAATTGGATTGAGCCTTGGTATGGAAACTTAC-TAAGTGATCACTTTCAAATTCAGAGAAACCCTGGAAT-GAATACAAA----GGGCAATCCTGAGCCAAATCC---TTCTT------------ATACTCTT-------------ATAAAAAAA--CTAAGGA---------GAGGTGCAGAGACTCAACGGAAGCTTTTCT--AACCAATG-------CAAAA-AGAGAGTCTGATAGATCTTT-TTACC-------AAACTGA-TTCGAGAATAAAGAGAGAGTCCTTTTCTACATGTCAAT---ATGGACAGTAATGAAATTTT-CAGT--AAGAA-GAAAATCCGTCGATTTG-------AAAAATCATGAGGGTTCAAGTCCCTCTATCCCCAAACGCCT-----AAAAAATTGCTCTCT---CTATTTTTTTTTTT-CAT-TTGGTTGGTGATCGGTTT------AAATGGGAAACGTCCCTTTTTAACTTGCAATTTCC-GGTTTTATTTCCTTTGCTTGTCCCTAATC--------------TAATTT-AAAATTAAAATAAAAAATA------------TGCAATAGGAGATG-GGTCGGGATAGCTCAGTGGGTAAAGCAAAGGACTGAAAATCCTCGTGTC------------ Cuscuta_applanata_507 ----------------------------------------TGGTATGGAAACTTAC-TAAGTGATCACTTTCAAATTCAGAGAAACCCTGGAAT-GAATACAAA----GGGCAATCCTGAGCCAAATCC---TTCTT------------ATACTCTT-------------ATAAAAAAA--CTAAGGA---------GAGGTGCAGAGACTCAACGGAAGCTTTTCT--AACCAATG-------CAAAA-AGAGAGTCTGATAGATCTTT-TTACC-------AAACTGA-TTCGAGAATAAAGAGAGAGTCCTTTTCTACATGTCAAT---ATGGACAGTAATGAAATTTT-CAGT--AAGAA-GAAAATCCGTCGATTTG-------AAAAATCATGAGGGTTCAAGTCCCTCTATCCCCAAATGCCT-----AAAAAATTGCTCTCT---CTATTTTTTTTTTTTCAT-TTGGTTGGTGATCGGTTT------AAATGGGAAACGTCCCTTTTTAACTTGCAATTTCC-GGTTTCATTTCCTTTGCTTGTCCCTAATC--------------TAATTT-AGAATTAAAATAAAAAATA------------TGCAATAGGAGATG-GGTCGGGATAGCTCAGTGG------------------------------------------ Cuscuta_americana ---------------------------TTGTATTGAGCCTTGGTATGGAAACTTAC-TATGTGATCACTTTCAAACTCAGAGAAACCCTGGAAT-GAATACAAT----GGGCAATCCTGAGCCAAATCC---TTATTT-----------ATAAATTT-------------AGAAAAAAA--CTAAGGA---------GAGGTGCAGAGACTCAACGGAAGCTTTTCT--AACCTATG-------CAAAA-AAAGAATCTGATAGATCTTT-TTACCACACCCCAAGCTGA-TTAGAGAATAAAGAGAGAGTCCATTTCTACATGTCAAT---ATGGACAGTAATGAAATTTT-CAGT--AAGAA-GAAAATCCGTCGATTTG-------AAAAATCGTGAGGGTTCAAGTCCCTCTATCCCCAAAAGCCT-----AACAAACTGCTCTAT---GCTTTT----------TTGGTGCATGATTC-------------AAATGGGAAACGCCCCATTTCCCTTCCGTTAAT---ATCTT--------------------AAT----------------ATAAT-ACAATTTATAATTAGAATC------------TATAGTGGGAGAT--GGTCGGGATAGCTCAGTTGGTAGAGCAGAGGACTGAAAATCCTCG---------------- Cuscuta_aff._floribunda -----------------ACGGACTTAATTGGATTGAGCCTTGGTATGGAAACTTAC-TAAGTGATCACTTTCAAATTCAGAGAAACCCTGGAAT-GAAGACAAT----GGGCAATCCTGAGCCAAATCC---TTTTT---------------------------------CGAAAAAAA--CTAAGGA---------GAGGTGCAGAGACTCAACGGAAGCTTTTCT--AACCAATA-------CAAGA-AGGGAGTCT-----------------------------TA-TTAGAGAATAAAGAGAGAGTCCTTTTCTACATGTCAAT---ATGGACAGTAATGAAATTTT-CAGT--AAGAA-GAAAATCCGTCGATTTT-------AAAAATCATGAGGGTTCAAGTCCCTCTATCCCCAAAGAATT-------------ACTCTCT--GCTTGG---------------GGGAACAGCTTTTT-----------TTAACTTGCAATCCCCT----------------------------TTTCTTGTTCCTTCAAT-------------------------------------AA--------------TAGGAAAGGAAATA-GGTCGGGATAGCTCAGTCGGTAGAGCAGAGGACTGAAAATCCTCGTGTCAC---------- Cuscuta_acuta ----------------TACGGACTTAATTGGATTGAGCCTTGGTATGGAAACTTAC-TAAGTGATCACTTTCAAATTCAGAGAAACCCTGGAAC-AAATAAATG----GGGCAATCCTGAGCCAAATCC---TTTATT-----------CTTTTATT-------------CTAAAAAA---CTAAGGA---------TAGGTGCAGAGACTCAACGGAAGCTTTTCT--AACAAAGG-------CAAAA-AGAGCGTCT---------TT-TTAC--------AAA-----TTCGAGAATAAAGAGAGAGTCCTTTTCTACATGTCAAT---ATAGACAGCAATGAAATTTTTACGT--AATAA-GAAAATCCGTGGATTTG-------AAAAATCGTGAGGGTTCAAGTCCCTCTATCCCCATAGGCTA-----CTATGCCTTTAG-T-TGC------------------------ATTTTGTTTAGGA------AATTTGAAAAAACCCTTTCT-------AATTTGTACTTCCCTTTTACTTTATTGATTGCCTTTCCTTGTCC---------ATAAT-AAAATTTAATTT-------------------TCGATTAGGAAATC-GGTCGGGATAGCTCAGCCGGTAGAGCAGAGGACTGAAAATCCTCGTGTCACCA-------- ; END; BEGIN CODONS; CODONPOSSET * CodonPositions = N: 1 - 689 ; CODESET * UNTITLED = Universal: all ; END; BEGIN ASSUMPTIONS; OPTIONS DEFTYPE = unord PolyTcount = MINSTEPS ; END;