#NEXUS BEGIN TAXA; DIMENSIONS NTAX=11; TAXLABELS Aplosporella_africana_CMW25424 Aplosporella_artocarpi Aplosporella_hesperidica Aplosporella_javeedii_CFCC89657 Aplosporella_longipes_CFCC89661 Aplosporella_papillata_CBS121780 Aplosporella_prunicola_CBS121167 Aplosporella_yalgorensis_MUCC512 Bagnisiella_examinans_CBS551_66 Saccharata_proteae_CBS115206 Aplosporella_thailandica_MFLU_16_0615 ; END; BEGIN CHARACTERS; DIMENSIONS NCHAR=918; FORMAT DATATYPE = DNA GAP = - MISSING = ?; MATRIX Aplosporella_africana_CMW25424 AACAAGGTTTCCGTA-GGTGAACCTGCGGAAGGATCATTACCGAGTTCTGGGTTCTCTCAATCGAGGCCCGCTCTCCCACCCTTTGTGAACTTAACCTCTGTTGCTTTGGCGTGGCCAGCGCT---------GTAAAAGGCGCGGTCGGCGGGGCCTGGCCCCCGCTGGCAAGCTTGCCCGCCAGAGGACTATC---AAACTCTTGTCAGTAAACGATGCAGTCTGA-TCAAACATTTAATTGTTTAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTATGGTATTCCGTAGGGCATGCCTGTTCGAGCGTCATTACACACCTCAAGCTCTGCTTGGTATTGGGCGTCGCCCCCTCTAAATCG-GGGGGCGTGCCTCAAAGACCTCGGCGGTGGCGTCTTTGCCTCAAGCGTAGTAATATTTATTTATAATCTCGCTTTGGAGTCGAAGGCGTCGCCCGCCGGACGAAACCTTTATTATTTTCTATCAAGGTTGACCTCGGATCAGGTAGGGATACCCGCTGAACTTAAGCATATCAATAAGCGGAGGA????-----GAGAAGTTCGAGAAGGTATGCATCGCATTTTTCCCATGGCGGGGTCTTGGTGGGGTCGCTTGGCGCTA-GCCTCATTTGGCTTCGGCAAAGCACACCAACATTTTGCGACCGT-GCTAACTTCCTTCCA-GGAA----------------------------------------------------------------------------------------------------------------------------------------- Aplosporella_artocarpi AACAAGGTTTCCGTA-GGTGAACCTGCGGAAGGATCATTACCGAGTTCTGGGTTCTCTC-TTCGAGGCCCGCTCTCCCACCCTTTGTGAACTTGACCTCTGTTGCTTTGGCGTGGCCAGCGCT---------GTAAAAGGCGCGGCCGGCGGGGCCTGGCCCCCGCTGGCAAGCTTGCCCGCCAGAGGACTATC---AAACTCTTGTCAGTAAACGATGCAGTCTGA-TCAAACATTTAATTGTTTAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTATGGTATTCCGTAGGGCATGCCTGTTCGAGCGTCATTACACACCTCAAGCTCTGCTTGGTATTGGGCGTCGTCCCCCAA-------ACGGACGTGCCTCAAAGACCTCGGCGGTGGCGTCTCTGCCTCAAGCGTAGTAATATTC-----TTATCTCGCTTTGGAGTCGGAGGCGTCGCCCGCCGGACGAAACCTTTATT-ACTTCTATCAAGGTTGACCTCGGATCAGGTAGGGATACCCGCTGAACTTAAGCATATCAA-----------????TCATCGAGAACTTCGAGAAGGTCAGTA------TTTTCTCAAGGCGGGGTCTTGGTGGGGTCCTTTCGCGCTAAACCTCGTTTGGCTCGGCAAACTCCCACCACCATTTTGCGACCGTGGCTAACCCCGCTCCA-GGAAGCCGCCGAGCTCGGCAAGGGTTCCTTCAAGTACGCCTGGGTCCTCGACAAGCTGAAGGCTGAGCGTGAGCGTGGTATCACCATCGACATTGCTCTCTGGAAGTTCGAGACCCCGAAGTACTATGTCACCGTCATCGA Aplosporella_hesperidica AACAAGGTTTCCGTA-GGTGAACCTGCGGAAGGATCATTACCGAGTTCTGGGTTCTCTC-ATCGAGGCCCGCTCTCCCACCCTTTGTGAACTTGACCTCTGTTGCTTTGGCGTGGCCAGCGCT---------GTAAAAAGCGCGGCCGGCGGGGCCTGGCCCCCGCTGGCAAGCTTGCCCGCCAGAGGACTATC---AAACTCTTGTCAGTAAACGATGCAGTCTGA-TCAAACATTTAATTGTTTAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTATGGTATTCCGTAGGGCATGCCTGTTCGAGCGTCATTACACACCTCAAGCTCTGCTTGGTATTGGGCGTCGTCCCCTAA-------ACGGACGTGCCTCAAAGACCTCGGCGGTGGCGTCTTTGCCTCAAGCGTAGTAATACTT-----TTATCTCGCTTTGGAGTCGAAGGCGTCGCCCGCCGGACGAAACCTTTATT-ATTTCTATCAAGGTTGACCTCGGATCAGGTAGGGATACCCGCTGAACTTAAGCATATCAATAAGCGGAGGA????------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Aplosporella_javeedii_CFCC89657 -----TCCTTCCGTAGGGGGAACCTGCGGAAGGATCATTACCGAGTTCTGGGTTCTCTC-ATCGAGACCCGCTCTCCCACCCTTTGTGAACTTAACCTCTGTTGCTTTGGCGTGGCCAGCGCT---------GTAAAAAGCGCGGTCGGCGGGGCCTGGCCCCCGCTGGCAAGCTTGCCCGCCAGAGGACTATC---AAACTCTTGTCAGTAAACGATGCAGTCTGA-TCAAACATTTAATTGTTTAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTATGGTATTCCGTAGGGCATGCCTGTTCGAGCGTCATTACACACCTCAAGCTCTGCTTGGTATTGGGCGTCGTCCCCTAAA------CGGGACGTGCCTCAAAGACCTCGGCGGTGGCGTCTTTGCCTCAAGCGTAGTAATCTTT-----TTATCTCGCTTTGGAGTCGAAGGCGTCGCCCGCCGGACGAAACCTTTATT-TTTTCTATCAAGGTTGACCTCGGATCAGGTAGGGATACCCGCTGAACTTAAGCATATCAATAGCCCGGAGG????CCATCGAGAAGTTCGAGAAGGTACGCATCTCATTTTTCCCGTGGCGGGGTCTTGGTGGGGTCGCTTGCCGCTA-GCCTCGTTTGGCTTCGGCAAAGCCCACCGACATTTTGCGACTGT-GCTAAC-TCGTCCCA-GGAAGCCGCCGAGCTCGGCAAGGGTTCCTTCAAGTACGCCTGGGTCCTCGACAAGCTGAAGGCTGAGCGTGAGCGTGGTATCACCATCGACATTGCTCTCTGGAAGTTCGAGACCCCGAAGTACTATGTCACCGTCATTGA Aplosporella_longipes_CFCC89661 -----CCCTTCCGTA-GGGGGACCTGCGGAAGGATCATTACCGAGTTCTGGGTTCTCTA-ATCGAGACCCGCTCTCCCACCCTTTGTGAACTTAACCTCTGTTGCTTTGGCGTGGCCAGCGCT---------GTAAAAAGCGCGGCCGGCGGGGCCTGGACCCCGCTGGCAAGCTTGCCCGCCAGAGGACTATC---AAACTCTTGTCAGTAAACGATGCAGTCTGA-TCAAACATTTAATTGTTTAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTATGGTATTCCGTAGGGCATGCCTGTTCGAGCGTCATTACAACCCTCAAGCTCTGCTTGGTATTGGGCGTCGTCCCCTAA-------ACGGACGTGCCTCAAAGACCTCGGCGGTGGCGTCTTTGCCTCAAGCGTAGTAATATTT-----TTATCTCGCTTTGGAGTCGAAGGCGTCGCCCGCCGGACGAAACCTTTATT-TTTTCTATCAAGGTTGACCTCGGATCAGGTAGGGATACCCGCTGAACTTAAGCATATCAATAAGCGGAGGA????CCATCGAGAAGTTCGAGAAGGTATGC-TCTCATTTTTCCCATGGCGGGGCTTTGGTGGGGTCGTTTGGCGCTAGCCCTCGTTTGGCTTGCCGACGCCGCACCGCCATTTTCAACAAAATGCTGAC-CCCGCACA-GGAAGCCGCCGAGCTCGGCAAGGGTTCCTTCAAGTACGCCTGGGTCCTCGACAAGCTGAAGGCTGAGCGTGAGCGTGGTATCACCATCGACATTGCTCTCTGGAAGTTCGAGACCCCGAAGTACTATGTCACCGTCATTGA Aplosporella_papillata_CBS121780 -------------------------------GGATCATTACCGAGTTCTGGGTTCTCTC-ATCGAGGCCCGCTCTCCCACCCTTTGTGAACTTAACCTCTGTTGCTTTGGCGTGGCCAGCGCTCTCTCGTAAAAAAGAAGCGCGGCCGGCGGGGCCTGGCCCCCGCTGGTAAG-TCGCCCGCCAGAGGACTATC---AAACTCTTGTCAGTAAACGATGCAGTCTGATTCAAACATTTAATTGTTTAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTATGGTATTCCGTAGGGCATGCCTGTTCGAGCGTCATTACACACCTCAAGCTCTGCTTGGTATTGGGCGTCGCCCCTCCCTAAACGAGGGGGCGTGCCTCAAAGACCTCGGCGGTGGCGTCTTTGCCTCAAGCGTAGTAATATTC-----TTATCTCGCTTTGGAGTCGAAGGCGTCGCCCGCCGGACGAAACCTTTAT--TTTTCTATCAAGGTTGACCTCGGA-----------------------T-----------------------????-----GAGAAGTTCGAGAAGGTACGCATCTCATTTTTCCCATGGCGGGGTCTTGGTGGGGTGCTTTGACGCTA-GCCTCGTTTGGCTTCGCCAAAGCCCACCGACATTTTGCGACCGT-GCTAAC-TCCTCCCA-GGAA----------------------------------------------------------------------------------------------------------------------------------------- Aplosporella_prunicola_CBS121167 AACAAGGTTTCCGTA-GGTGAACCTGCGGAAGGATCATTACCGAGTTCTGGGTTCTCTC-ATCGAGGCCCGCTCTCCCACCCTTTGTGAACTAAACCTCTGTTGCTTTGGCGTGGCCAGCGCT---------GTAAAAGGCGCGGTCGGCGGGGCCTGGCCCCCGCTGGCAAGCTTGCCCGCCAGAGGACTATC---AAACTCTTGTCAGTAAACGATGCAGTCTGATTCAAACATTTAATTGTTTAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTATGGTATTCCGTAGGGCATGCCTGTTCGAGCGTCATTACACACCTCAAGCTCTGCTTGGTATTGGGCGTCGCCCCCCT--ACACG-GGGGACGTGCCTCAAAGACCTCGGCGGTGGCGTCTTTGCCTCAAGCGTAGTAATATTC-----TTATCTCGCTTTGGAGTCGAAGGCGTCGCCCGCCGGACGAAACCTTTAT--TTTTCTATCAAGGTTGACCTCGGATCAGGTAGGGATACCCGCTGAACTTAAGCATATCAATAAGCGGAGGA????------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Aplosporella_yalgorensis_MUCC512 ---------------------------GGAAGGATCATTACCGAGTTCTGGGTTCTCTC-ATCGAGGCCCGCTCTCCCACCCTTTGTGAACTAAACCTCTGTTGCTTTGGCGTGGCCAGCGCT---------GTAAAAGGCGCGGTCGGCGGGGCCTGGCCCCCGCTGGCAAGCTTGCCCGCCAGAGGACTATC---AAACTCTTGTCAGTAAACGATGCAGTCTGATTCAAACATTTAATTGTTTAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTATGGTATTCCGTAGGGCATGCCTGTTCGAGCGTCATTACACACCTCAAGCTCTGCTTGGTATTGGGCGTCGCCCCCCT--ACACG-GGGGACGTGCCTCAAAGACCTCGGCGGTGGCGTCTTTGCCTCAAGCGTAGTAATATTC-----TTATCTCGCTTTGGAGTGGAAGGCGTCGCCCGCCGGACGAATCATTTA-------------------------GAGGAAGTAAGCAT-----------T-----------------------????-------GAAGTTCGAGAAGGTATGCATTGCATTTTTCCCATGGCGGGGTCTTGGTGGGGTCGCTTGGCGCTA-GCCTCGTTTGGCTTCGCCAAAGCCCACCAACATTTTGCGACCGT-GCTAATAGCCTCCCA-GGAAGCCGCCGAGCTCGGCAAGGGTCC------------------------------------------------------------------------------------------------------------------ Bagnisiella_examinans_CBS551_66 AACAAGGTTTCCGTA-GGTGAACCTGCGGAAGGATCATTACCGAGTTCTGGGTTCTCTC-TTCGAGGCCCGCTCTCCCACCCTTTGTGAACTTGACCTCTGTTGCTTTGGCGTGGCCAGCGCT---------GTAAAAGGCGCGGCCGGCGGGGCCTGGCCCCCGCTGGCAAGCTTGCCCGCCAGAGGACTATC---AAACTCTTGTCAGTAAACGATGCAGTCTGA-TCAAACATTTAATTGTTTAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTATGGTATTCCGTAGGGCATGCCTGTTCGAGCGTCATTACACACCTCAAGCTCTGCTTGGTATTGGGCGTCGTCCCCCAA-------ACGGACGTGCCTCAAAGACCTCGGCGGTGGCGTCTCTGCCTCAAGCGTAGTAATATTC-----TTATCTCGCTTTGGAGTCGGAGGCGTCGCCCGCCGGACGAAACCTTTATT-ACTTCTATCAAGGTTGACCTCGGATCAGGTAGGGATACCCGCTGAACTTAAGCATATCAATAAGCGGAGGA????GAGAAGGAGACCAAGACCAAGTCCACC---GGCAAGACCCTCCTCGAGGCCATCGACAACATCGACGCCCCCGGCCCCTCCGCGATTGGCGGCATTGGCACGGT-CCCCGTCGGCCGTGTCGAGACCGGTACCATCAAGGCCGGCATGGTCGTCACCTTCGCCCTCAAGTCCGTCGAGATGCACCACGAGCAGCTCACCGAGGGTGTCCCCGGTGACAACGTCGGCTTCAACGTCAAGAAGAACGACCCCCCCAAGGGCTGCGTCATCGTCCTCAA Saccharata_proteae_CBS115206 AACAAGGTTTCCGTA-GGTGAACCTGCGGAAGGATCATTAACGAGTTCTGGGTCC-----TTCGGGGCCCGTCCTCCAACCCTTTGTCTAC--AAACCACGTTGCTTCGGCG---------------------GGCAGCCGGGGGTCCGCCCCGCGCGGCTTCCCCGGGTCCA-CTGCCCGCCGGAGGATTACCACAAAACCCTTGCTTTGAAACAATGCAGTCTGA-CCGAATATCAAATATTCTAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTATTCCGAGGGGCATGCCTGTTCGAGCGTCATTACACCCCTCAAGCACTGCTTGGTATTGGGCCCCGTCCTCAC---------CGGGCGGGCCTTAAAGACCTCGGCGGCGGCGTCGTAGCCTCAAGCGTAGTAATTCTT--------TCTCGCTTTGGAGGCCGCGGCGTCTCCCGCCGGACGAACCTTTTTA--CTTTCTATCAAGGTTGACCTCGGATCAGGTAGGAATACCCGCTGAACTTAAGCATATCAATAAGCGGAGGA????GAGGGGCAGTGTTGGTGGGGTTTCGCA---CGCTTTTCTCATTTCGGGGCTCGGCAAAACACCATGAGCTCTGGCCCCGACACTGCTTCATGTCTTGGTCCTCT-CTCTCTCAACGATGCTAACTCTCGCCACA-GGAAGCCGCCAAGCTCGGCAAGGGTTCCTTCAAGTACGCCTGGGTCCTCGACAAGCTGAAGGCTGAGCGTGAGCGCGGTATCACC-------------------------------------------------------- Aplosporella_thailandica_MFLU_16_0615 AACAAGGTTTCCGTA-GGTG-ACCTGCGGAAGGATCATTACCGAGTTCTGGGTTCTCTC-ATCGAGGCCCGCTCTCCCACCCTTTGTGAACTAAACCTCTGTTGCTTTGGCGTGGCCAGCGCT---------GTAAAAGGCGCGGCCGGCGGGGCCTGGCCCCCGCTGGCAAGCTTGCCCGCCAGAGGACTATC---AAACTCTTGTCAGTAAACGATGCAGTCTGA-TCAAACATTTAATTGTTTAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTATGGTATTCCGTAGGGCATGCCTGTTCGAGCGTCATTACACACCTCAAGCTCTGCTTGGTATTGGGCGTCGTCCCCTAA-------ACGGACGTGCCTCAAAGACCTCGGCGGTGGCGTCTCTGCCTCAAGCGTAGTAATATTC-----TTATCTCGCTTTGGAGTCGGAGGCGTCGCCCGCCGGACGAAACCTTTATT-ACTTCTATCAAGGTTGACCTCGGATCAGGTAGGGATACCCGCTGAACTTAAGCATATCATAAGGCCGGAGG????TCATCGAGAAGTTCGAGAAGGTCAGT-----ATTTTTCCCATGGCGGGGTCTTGGTGGGGCCCGCCCGCGCTAGGCCTCGTCTGGCTCGGCAAACGCCCACCGA-ATTTTGCGACCGTGGCTAACCCCGCCCCA-GGAAGCCGCCGAGCTCGGTAAGGGTTCCTTCAAGTA--------------------------------------------------------------------------------------------------------- ; END; BEGIN TREES; Title Ekanayaka_MP_analysis; LINK Taxa = Taxa; TRANSLATE [0] 1 Aplosporella_africana_CMW25424, [1] 2 Aplosporella_artocarpi, [2] 3 Aplosporella_hesperidica, [3] 4 Aplosporella_javeedii_CFCC89657, [4] 5 Aplosporella_longipes_CFCC89661, [5] 6 Aplosporella_papillata_CBS121780, [6] 7 Aplosporella_prunicola_CBS121167, [7] 8 Aplosporella_yalgorensis_MUCC512, [8] 9 Bagnisiella_examinans_CBS551_66, [9] 10 Saccharata_proteae_CBS115206, [10] 11 Aplosporella_thailandica_MFLU_16_0615; TREE PAUP_1 = (10:66.5,(9:82,((2:11,11:9):13,((3:3,(4:17,5:28):5):3,(6:10,(1:9,(7:0.0,8:8):7):7):7):14):59):66.5):0.0; END;