#NEXUS

BEGIN TAXA;
	DIMENSIONS NTAX=43;
	TAXLABELS
		Achromobacter_phage_JWDelta_AHC56597 Bacillus_phage_Basilisk_AGR46580 'Bacillus phage vB_BanS-Tsamsa YP_008873483' 'Bacillus virus SPO1 YP_002300330' 'Brochothrix phage A9 YP_004301396' Burkholderia_virus_Bcep22_AAQ54982 'Burkholderia virus BcepMu YP_024701' 'Clostridium phage c-st YP_398598' 'Enterobacteria phage 933W NP_049511' 'Enterobacteria phage CUS-3 ABQ88401' Enterobacteria_phage_LP7_AAA88220 Enterobacteria_phage_RB49_AAF23757 'Enterobacteria phage T3 NP_523347' 'Enterobacteria phage T4 NP_049776' 'Enterobacteria phage T7 NP_042010' 'Erwinia phage phiEaH2 YP_007237828' 'Erwinia phage vB_EamP-S6 YP_007005834' 'Escherichia phage N4 YP_950546' Escherichia_virus_186_AAC34148 'Escherichia virus HK022 NP_037663' 'Escherichia virus HK97 NP_037698' 'Escherichia virus Lambda NP_040581' 'Escherichia virus Mu NP_050632' 'Escherichia virus N15 NP_046897' Escherichia_virus_P2_AGG36517 'Haemophilus phage SuMu YP_007002934' Hamiltonella_virus_APSE1_AAF03961 'Iodobacteriophage phiPLPE YP_002128452' 'Klebsiella phage JD001 YP_007392855' 'Listeria virus A511 YP_001468454' 'Phage MP22 YP_001469154' 'Pseudomonas phage 201phi2-1 YP_001956731' 'Pseudomonas phage B3 YP_164067' 'Pseudomonas phage D3112 NP_938233' 'Pseudomonas phage phiCTX NP_490600' 'Pseudomonas phage phiKZ NP_803591' 'Rhizobium phage 16-3 YP_002117560' 'Salmonella phage ST64T NP_720326' Salmonella_virus_P22_BAG12600 Shigella_phage_Sf6_AAQ12192 'Vibrio phage KVP40 NP_899601' 'Yersinia phage phiYeO3-12 NP_052122' Yersinia_phage_PY100_CAJ28416 
	;

END;


BEGIN CHARACTERS;
	DIMENSIONS  NCHAR=817;
	FORMAT DATATYPE = Protein GAP = - MISSING = ?;
	MATRIX
	Achromobacter_phage_JWDelta_AHC56597        ---------MSNTLIKQELDEWLDKVDYKV--LNGIHPTERYVPSEFALIFMNFIKLV------NGAQGESNK-TPPVHLKMLDKLTEPNE----YIA-------------------------------------NLCFRGAAKTTLFMEYFVLFLAVFGELP---NFGSIDAMIYVSDSMDNGVKSARKNIEFRYDNSPFL-QEWIPHAIFTDNYL----EFKSKSGHR--LGC----------------------------------KMFGAKTGL----RGSKIFGKRPVLCILDDLVSDDDAKSPAAMQSIKDTVYKGVNHAL-------------DPTRRKVIFNGTPFN-KNDIMI---------EAVESGAWSVNV----WPVCEKFPC-PKEEFVGAWEDRFSYQYVK--DQYDMAVKTGKVSGF--NQELMLRITSEE-----ERLVQEGEIQW----------------YSRQQLLRMKSQYNFYITTDFATSDKQ----------------------TADYTVISVWAYNANGDWF---------------------WVDGSCERETMEK-------TYDRLFRFAQEYR-PQ-SVGVETTGQQFGFVSLLQREMMTR--NIWFTFASSEQSGK-----------PGIRPVTNKLSRFNLVVPWFKMGKMFF-------PSELKTSNIMGIFMGQIRLATTNG------------LKGKDD----------CIDTISQLAYLN--PWKPAMATMAPSSD------------KDELWDEDIGTSDVNPLQSYIV-------------
	Bacillus_phage_Basilisk_AGR46580            ------------MEIKPQVGGISSIDKNRRQYIREVRKGVRRSQIDLIDFIHYYRSHP------VEACYDILGISLMPYQKELLRNSWGKA----FPL-------------------------------------WVMSRGSGKSYLAAIDMGLNAILFPNMR----------IGIIAPSYRQSKFLFLKFKEEVYNKSKIL-RKFVTGNMKEGNEEC---KVQFSNGSF--IQA----------------------------------LPFGDGSTI----RGQRYNTIYIDEYAAIDEQIVRLVVEPMLTVKRGFDPDNPD-----------------DSEGNRVVIFSSAYY-TWNHFYEATQRYLSRIKGGDNDYYVAVVDYRMPLKYGLYDERAIAKAKKDN-----------TEGDFLMEYGSV-----FQSESQGSWI-------PTMIFDRRVVWD---------------QDLEPRLIGQRNKEYGLYCDFSISQQD----------------------SADNTTFLICELEPNGKNKPILVRAEKGLTLDAIHARMRKYDADFNLRHIWM--------DGEKLGLALKGYL-EK-PYTNPETGEEQLPLLDIEGNNPDVVGKKFVKYFRHSAENNH----------NMGLAAKRMVEQRRIVMPVLQ-----------------DRHEDPDIELAYLELLAMKKEITQ--------IKAVPSG---------MYYKFEQEKKST--LKRDRWTVFAYSCMA-----------LEDRLHGEDEDDFIFAVV-----------------
	'Bacillus phage vB_BanS-Tsamsa YP_008873483' -----------------------MSQKKKNNKSGTFDAVKDDFAKMLSFFREYPDYFI------DYIKTDVTRFDLTPFQRVFLRAFFRKKKVG-----------------------------------------IVASRGISKTYIDVMAHYLKCVMYPDAS---------ICLAMPTKTQSAKVVQEKVEELWRDYPILK-NELI--DFKFQKDYV---SLRFRNGAS--LDT----------------------------------LTVG---------ESSRGLRANGIALEEIVDEKMDRDTINNVIL---------------------------PILAQPRMTKHGADP-NEYSKTQAYITTASHKQSYCYEKYMELFGEMVRGEPTIVLGSSYEMGTRFGTLDYADVIE--KKNSATYSPLSFDRE--YGSIFTGSNERSLVTV-EEITRCRTVEEAE--------------FRVDPNSTKKKDKDAIYVLAYDIARAE--------------------GKQTANSSLAVIKAVPRGDGTYQ----------------KFLVNMFTKEGTHFHE-------QALFLKKKVVEYN-AS-ILVLDHNGIGRGVTDILVTEIDANPPYAVVNDDRYDKYKKANSIPMLHLI-SSQSKESKNTDIVNVFMSTIQNGDIFMLKSEANMRGIIRDKDGNRLAEKLMPHIQVDRMIDE--------IMNLEYVQTGNTTNVKQISRSIEKDRYS--ALAYGIFYMYQLEQK-----------NKQRKRQTFDASSFFAVKEAKYKIWN---------
	'Bacillus virus SPO1 YP_002300330'          --------------------------MTKYTKEQIQRALINRTPTLYALRYRYIKGNP------LTFKSTKNPIKHRPWQIAILEDQHP--DKV-----------------------------------------VRKSRQLGLSEMAVTEFIWFLDTHPNVN---------GMYTFPRKEQMEDFSNTRIA-PIFDESPYL-SSRLDKKMNNVRLKK---LV---NGSA--MFL----------------------------------RSAWGSALGEGQAIDILGLDEYDRMKDGVELAFRESMKSSAYGLMRRWST---------------------PTIPGRGVDMLFSDS-DQ--------RYYHHKCDKCGHWQVITLE--DNIVCINEK-GVNLVDETIDDGTYQFQCQKCKQELNRWNKGEYVAK--YPTRKDRR---------GYHISQLDAVWISADE-----------IMRNQFDYKVKQLFYNYVIGMPYASEGLIITDQDVLNCVAFPEPIGYRDNSKYVKIVAGIDWGYFNWMVI----LGLTEDNQVHLLDFHWVEDNPNRPLD---------CVNVFTALLKPYD--P-DVIVADNGFGADRNSYLIQQFPG---RTYACDWDTPRGR------------NMMVDQWNDNAAKVRVDKTVKMKRTLY---------NIKAKALKTFGQGE-KLSMLTKHLKN--------VRTLMEEEEG------EIFERVSRIGDD--HGACALTYGYIALDRIL---------EAHKPKQDMNYDFI---------------------
	'Brochothrix phage A9 YP_004301396'         ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MAIVARDIENTL-REDMPDMLHSRG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DYTSVVVGIDW---------------------------GEHFHWVVVMGRRANG-------------------------------------------------------LVDIMRVFNVKSSKSNTKDI-------EADIKSLIAQVDLYSP-DLILADIGFSGNYIAKLINAFGKH--RTFGVQVNPAKSN------------GQVHPVWNENGNKVTIDKLTQNTIFIE-------AIKTKRVGLWSNKTAERNMFTEHWTNVV--------IRDVEDERTG------EIQKEITRKGDD--HWAQASVYANVAMNHIID--------NVTSRSNAFNYTDVSGQDNLGF-------------
	Burkholderia_virus_Bcep22_AAQ54982          -------------------MTAASTLEHDDAPLTEDELARCLSDPMWRICSGRLYKIIIKGDDQDDDEGLVLPFRPNRAQRRLLRRLWHRNL-------------------------------------------ILKARQLGFTTLICIIWLDHALFNANSR---------CGIIAQDRETAEALFRDKVKFAYDNLPEAL-REAMPLANCTKAELL---FAHNNSSIR--VAT----------------------------------SVRGGTIHRLHISEFGKICAKYP-DKAAEVVTGSIPAVPKSGILVIES-----------------------TAEGREGEFYNITMQ-AEAIAQAGKPLTARDYRFHFFPWWQAPEYRMDSAHVIITEKDRQYFETIEAKHGITI-----DAEQRAWYVATRDAD--FSGNEERMWQE---------------------------------YPSTPDEPFKVSTEGTYYAQQLAAARK------------QGRIKPSLPVLFNVPCFTFWDIGNSDGTAIW-----------------------VLQRVEHEW----------RAIRFKEGWG-EP-YSYFVKWLQGLGL---VWDTMFLPHDADHVRQGQTTNKSP-----------KQMLEELMPGVRFEIVPRIDDVNWGIQQTRDAFPLLWFDETECKDGII-HIENYRKKWSVQQ--------QRWMTE----------PDKTGGHSEAAD--ALRQFAQAYAGGLI------------NVRKPAGKSKRPRSWRTA-----------------
	'Burkholderia virus BcepMu YP_024701'       --------------------------------MTTVETRADRAPAVLLPYQQKWCADT------SPVKV------------------------------------------------------------------CEKSRRVGLSWGEAADSALLAASQRGMD----------VWYVGYNKDMA-------QEFIRDCADWA-KFYSLAADEIEETEE---VFQDKDGDKSILAF----------------------------------VIRFASGFRVTALSSRPSNLRGKQGRVIIDEAAFHEQLGELLKAAMALLMWG-------------------GQVHIISTHDGVDNA---------FNELVTDVRSGKKPYSLHRITFADAVQDGLYQRICLRKGEAWTAEGEAKWV---KDIRASYGADAEEELDCVPKNSGGAWL-------SRALIESRM------------------SADTPVLRWACKQGFEVLPDHIRAAEC-------RDWLEATLGPLLTALPVDARSYNGEDFGRTGDLTVHVPLIEQQNLVRRVPFIVELRNVPFRQ-------------QEQIAFYLLDRLPRFT-GGAFDARGNGQYLAEV-----------------------------------AMQRYGASRIQQVMLSESWYREHMPPV--------KAAFEDGTIDGLPKDADVLADLRAVQV--------IKGVPRIPDVRA----TGQDDGKRHGDA--AVAVALAYYASRELNK----------GPVTAKSRRRRSSVRMTEGYA--------------
	'Clostridium phage c-st YP_398598'          -MGTYNHFSKKKRMKQDGDY-QNVDSKHSY--DPIKDKKDGLHTEEWEKYISYYRKYI------DKFCIEVLGLKLYLFQRLILRAMARNQ----YVM-------------------------------------LICCRGLGKSWLSAVFFVASCILYKGLK--------CGI-ASGQGQQARNVIIQKVKGELAKNPSIA-REIVFPIKTGADDCV----VNFRNGSE--IRA----------------------------------IVLGRNQG-----DGARSWRFHYLLVDECRLVSDKVINTILIPMTKTKRAVAIHHN---------------KREKGKVIFISSAYL-KTSDLYKRFKYFCDKMSSGANNYFVCSLDYRVGIEAGIFD-QDDIDEERNKPDMTIEEFQ--YEYEGIFVGSSGESY--FPYETTTPARVL-----GRGEITQPKKSKSEYIIT---------HDVAISGASDSDNACTHVIKLKPKPNG-----TYVKEVVYTKTHNGISLPEQ-RDFLRELYHLKFPNAVKIVIDMRGNGEPLPSLFYETW-EYTNSKTGEKI-------EFPPLVLDNDDKG-KS-LNNALPILRGITATVGSNNKMYTYMKASFEN--------------------GSLRLLKDSVEVDDLFKNKEMPIEEFQ---------FFKQTDRLIRELSNIKQVETDHNNIK------------------------YERIDKGTKRDR--ATSLMYGLSVVQEME-----------EENRMSLNDEYEDDDPLVYYI--------------
	'Enterobacteria phage 933W NP_049511'       ----------------MTFRKNEPRCDEPSEMTEAEQRLFIMTKLSNPWWRLNHLYKI------QNEKGELVTFRMRPAQRQLFRSMHNKNI-------------------------------------------ILKARQLGFSTAIDIYLLDQALFIPHLK---------CGIVAQDKQAASEIFRTKIAVPFDHLPDWL-RASFT-------------IVERRSGAS--GGY----------------------------------ILFGHGSSIQVATSFRSGTVQRLHISEHGKICAKYPAKAKELRTGTLNAVSDECIIFDES-----------TAEGVGGDFYEMSNR-AQEITASGLLLTAQDYKFHFYAWWQDPKYSARVPESGLKL-SREKMTYFSAVEKAMNITL--TDEQKQWYINKETEQ--REEMKQEFPSTPQ----EAFLTSGRRVFSA--------------ESTLQAESFCSPPMIVYDIEPVTGAKT----------------KAQSLREGNKNELQRTLMNYLLVWELP-----------DPDEEYVCGADTAEGLEHGDR-------SSLDVVKRSNGEQ-VA-HWF-------GHLDAELFAHLISQVCRMYNNAFVGPERNNHGHAVILK---LRELYPTRYIYNEQHLDQAYDDDTPRL--------GWLTTRQSKPVLTEGMKTLLNNGISG---------IRWSGTLSEMNT----YVYDAKGSMNAQEGCFDDQLMSYMIAQE------------MRARMPVRVKQKTDKRRTTHWMAH-----------
	'Enterobacteria phage CUS-3 ABQ88401'       --------------------------------------MTSINPIFEPFIEAHR-----------------------------------------YKV-------------------------------------AKGGRGSGKSWAIARLLVEAARRQPVRI-------------------------LCARELQNSISDSV-IRLLEDTIEREGYTA---EFEIQRSMI--RHL----------------------------------G--TNAEFMFYGIKNNPTKIKSLEGIDICWVEEAEAVTKESWDILIPTIR---------------------KPFSEIWVSFNPKNI-LDDTYQRFVVNPPDDICLLTVNYTDNPHF---------------PEVLRLEMEECKRRNP--TLYRHIWLGEPVSAS--DMAIIKREWLE------AATDAHKKLGWKA----------------KGAVVSAHDPSDTGPDAKGYASRHG-----------------------SVVKRIAEGLLMDINEGADW-----ATSLAIEDGADHYLWDGDGVGAGLRRQ-------TTEAF----------S-GKKITATMFKGSESPFDEDAPYQA--GAWADEVVQGDNVRTI---------GDVFRNKRAQFYYALADRLYLTYRAVVHGEYADPDDMLSFDKEAIGEKMLEKLFAELTQIQR--------KFNNNGKLELM-----TKVEMKQKLGIP--SPNLADALMMCMHCP-----------ESAAQPDYSSYSIPCGVG-----------------
	Enterobacteria_phage_LP7_AAA88220           --------------------------------MELDAILDNLSDEEQIELLE-----------------------------------------------------------------------------------LLEEEENYRNTHLLYEFTPYSKQRE---------------FIDAGHDYQSDVLWLVTSLVSHLLALL-KSRFTLPGDTRERKV--------------IRL----------------------------------MVNMAESGKVSVSMSQLSSGIGGETNETV------------------------------------------TKTTQRILCGRIEEN----------DEPGYGSPKEDSSWEKSSVLLILLIIFSLSH-HRLMVLKMHSICYFKH-----TRRHRHAAGDTITAYGLTKRLPYSIY--------AEGLTRTNKYGQFSILTFTPLMG----MSDGVTKFLKNPSKSQKVVNMTIYDAEHYTDEQKEQIIASYPEHEREARARGIPTMGSGRIFQIPEETIKCQPFECPDHFYVIDAQDFGWNHPQAHIQLWWD-------KDADVFYLARVWKKSE-NTAVQAWGAVKSWANKIP--------VAWPHDGHQHEKGG-----------GEQLKTQYADAGFSMLPDH---------------ATFPDGGNSVESGISELRDLMLEGRFKV--------FNTCEPFFEEFR----LYHRDENGKIVK--TNDDVLDATRYGY-------------MMRLRQDDARY------------------------
	Enterobacteria_phage_RB49_AAF23757          --------------MSVIEGINAMATDEHPLHLAHPSTLETKIDSNGIEWILSKHDDK------WYPKKFSDYLKLNRP?KIRMQSTDPTN----YKF-------------------------------------FKDSDNIRTRYMRLKNLRRANIKTQYTPEMIAEWKRCRKDIVYFAETYCAITHIDYGTIKVQLRDYQ-KDMLKIMHENRMSAH---KLSRQLGKT--TAV----------------------------------AIFLAHYVCFNKDKAVGILAHKGSMAVEVLERTKQAIELLPDFLQPGIVEWNKKSIVL-------------ENGSSIGAYASSPDAVRGNSFSFIYID----ECAFIQNWTDCFLAIQPVISSGRES-KMIMTTTPNGLNHFYDIWQ--SAIDGKSGYVPYEAV--WHSVKERLYN-------KADIFDDGYEWSSQA------------IAGSSLEQFLQEHNAEFFGSSGTLIRATTLSRLSFIDVVNDNGFYQFEKPKEGRKYVATLDCSEGRGQDY----HALQIIDITEFPYKQVAVYHSNTTSHFI-------LPDIVFKYLMMYNECPVYIELNSTGVSIAKSLAMDLEYDNIICDSFIDLGMKQSKRSKA---------MGCSALKDLIEKDKLIINHKGTIQELR--------TFSEKGVSWAAEEGFHDDLVMSLVI----------FGWLTTQEKFAE----YAGKDEMRIASE--IFRKELDELGEEYAPV----------VIYDGANGIEEYRPREGLTMI--------------
	'Enterobacteria phage T3 NP_523347'         ---------------------MSTQSNRNA--LVVAQLKGDFVAFLFVLWKALNLPVP------TKCQIDMAKVLANGDNK--------------KFI-------------------------------------LQAFRGIGKSFITCAFVVWTLWRDPQLK----------I-LIVSASKERADANSIFIKNIIDLLPFL-AELKPRPGQRDSVISFD-VGPAKPDHS--PSV----------------------------------KSVGITGQL----TGSRADIIIADDVEIPSNSATQGAREKLWTLVQEFAALLK------------------PLPTSRVIYLGTPQT-EMTLY---------KELEDNRGYTTII----WPALYPRSREEDLYYGERLAPMLREEF----NDGFEMLQGQPTDPV--RFDMEDLRERELEY---GKAGFTLQFMLNPNLSDAEKYPLRLRDAIVCGLDFEKAPMHYQWLPNRQNRNEELPNVGLKGDDIHSYHSCSQNTGQYQQRILVIDPSGRGKDETGY------AVLFTLNGYIYLMEAGGFRD-------------GYSDKTLESLAKK-AK-QWKVQTVVFESNFGDGMFGKVFSPVLLKHHAAALEEIRARGMKELRICDTLEPVLSTHRLVIRDEVIREDYQTAR----------DADGKHDVRYSLFYQLTRMAREKGAVAH--------DDRLDALALGVE----FLRSTMELDAVK--VEAEVLEAFLEEHME-----------HPIHSAGHVVTAMVDGMELYWEDDDVNGDRFINW-
	'Enterobacteria phage T4 NP_049776'         ------------MEQPINVLNDFHPLNEAGKILIKHPSLAERKDEDGIHWIKSQ----------WDGKWYPEKFSDYLRLHKIVKIPNNSDKPELFQT-------------------------------------YKDKNNKRSRYMGLPNLKRANIKTQWTREMVEEWKKCRDDIVYFAETYCAITHIDYGVIKVQLRDYQ-RDMLKIMSSKRMTVC---NLSRQLGKT--TVV----------------------------------AIFLAHFVCFNKDKAVGILAHKGSMSAEVLDRTKQAIELLPDFLQPGIVEWNKGSIEL-------------DNGSSIGAYASSPDAVRGNSFAMIYIDECAFIPNFHDSWLAIQ-----PVISSGRRSKIIITTTPNGLNHFYDIWT--AAVEGKSGFEPYTAI--WNSVKERLYN-------DEDIFDDGWQWSIQTINGSSLAQ----FRQEHTAAFEGTSGTLISGMKLAVMDF-------IEVTPDDHGFHQFKKPEPDRKYIATLDCSEGRGQDY-------HALHIIDVTDDVWEQVGVLHSNTISHLI----LPDIVMRYLVEYNECPVYIELNSTGVSVAKSLYMDLEYEGVICDSYTDLGMKQTKRTKA---------VGCSTLKDLIEKDKLIIHHRATIQEFR--------TFSEKGVSWAAEEGYHDDLVMSLVI----------FGWLSTQSKFID----YADKDDMRLASE--VFSKELQDMSDDY-------------APVIFVDSVHSAEYVPVSHGMSMV-----------
	'Enterobacteria phage T7 NP_042010'         ---------------------MSTQSNRNA--LVVAQLKGDFVAFLFVLWKALNLPVP------TKCQIDMAKVLANGDNK--------------KFI-------------------------------------LQAFRGIGKSFITCAFVVWSLWRDPQLK----------I-LIVSASKERADANSIFIKNIIDLLPFL-SELKPRPGQRDSVISFD-VGPANPDHS--PSV----------------------------------KSVGITGQL----TGSRADIIIADDVEIPSNSATMGAREKLWTLVQEFAALLK------------------PLPSSRVIYLGTPQT-EMTLY---------KELEDNRGYTTII----WPALYPRTREENLYYSQRLAPMLRAEY----DENPEALAGTPTDPV--RFDRDDLRERELEY---GKAGFTLQFMLNPNLSDAEKYPLRLRDAIVAALDLEKAPMHYQWLPNRQNIIEDLPNVGLKGDDLHTYHDCSNNSGQYQQKILVIDPSGRGKDETGY------AVLYTLNGYIYLMEAGGFRD-------------GYSDKTLELLAKK-AK-QWGVQTVVYESNFGDGMFGKVFSPILLKHHNCAMEEIRARGMKEMRICDTLEPVMQTHRLVIRDEVIRADYQSAR----------DVDGKHDVKYSLFYQMTRITREKGALAH--------DDRLDALALGIE----YLRESMQLDSVK--VEGEVLADFLEEHMM-----------RPTVAATHIIEMSVGGVDVYSEDDEGYGTSFIEW-
	'Erwinia phage phiEaH2 YP_007237828'        ----------MILRESDWGY-YPGSLPDDTTPNKSFKKFASLLNQLGVKHYYVHLALH------NRDLLGVDPFSPDLTLEQKAAIITECAENPWYFFRECVRVPADGMKNGLPFRIDRGNFSMYWIFFNNIDAAVEFLRQHGKTVGMSALLLWLMRFLENSR---------TI-LVTKGPALREETINKMKQLRNGLPDYL---WPHHPDDPDNRET---FACLAQGNKLITGIGQNDAESANGVGRGLTAGRLFGDEGPFTKNIHHILPAALASGTAARRINEAEGVPYGNVFATTPGDLATEEGAYMYELMTSGIMWDERYIDI--------------PSRTQLIDIIRKGSTAKIPRIMFYVKYNHRQLGTTDEELADM----IANAPGTPDQIRRDFGGEWTTGGFNKPFS--GDDARRMNASRMRAV--YKDISPSNYVTDWYYT-EEEMITKLHDRHIIGLDTSEAVG-----RDAIAMSIVNSMNGEYAGKLTVNETN-------VIGFAIHLADFMVRYPNTVLILERRSTGSSVADAII-----LQLQSKVPDLHRRLYVKVTQDYARTHE-------LYKEYHRGPVGSA-ER-FWDKFRKYIGFSTDQDKRRKLYGEVFTMALRLTADTLRSGELIDQILSLVERNGRIDHKASGHDDLVVSWLLAMWLIL-----------FGNNLGHYGISNSRLMMRNRNL----------LENKGDFDEEEQ----VEEEEKQQKLMG--EIEEAIRYSAGLSDPVQQMASRNRL-QSLIAQLNTDTRNVASMESLKELIQRQRMK-----
	'Erwinia phage vB_EamP-S6 YP_007005834'     ----------------MEAQKEKTVDDWLNQVDYAYLNAGDYKPSEFSLNFTNFVKLV------NGTEGESNK-TPVVHLRMLDEIAGQKKRIA-----------------------------------------NLCSRGLGKTTLMFEYLAPYIAVFEGIE---GFGEISGLIYVSDSMDNGVKSARQNLEFRYNNSDWL-QHWLPQAKFTDNYI----EFTNRNGHR--LGI----------------------------------KMFGAKTGL----RGTKIYGKRPVMAILDDLVSDDDAKSKAAMGAIKDTVYKGVNYAL-------------DPTRRKIIFNGTPFN-KNDILY---------EAVESGGWHVNV----WPICEKFPC-SREEFRGAWEDRFTYEFIL--DEYETSLKNGKLAAF--NQELMLRISSDE-----ERIIQDDDIQW----------------YERKNLLKNQGKFNFYITTDFATSDKE----------------------TADFSVISVWAYNAHGDWF---------------------WVDGVCARQTMDK-------SIDELFRLVSEYQ-PQ-AVGIETSGQQGAFIQWLRNEQMNR--NIWFNFAIEKGKTQ-----------AGIRPVSNKYSRFQLVVPLFKAGKVYF-------PKEMKTSNIIGEFMSELTMVTVNG------------FKSKHDD---------CLDTVSMLMYLN--PWKPSEDSPMVR--------------KDDHWDMDDGPDDVIGISSYLV-------------
	'Escherichia phage N4 YP_950546'            ----------MSELIKQELDEWLDQVDYSV------LNTPTYIPTEFALTFANFIKLV------NGKEGESNK-TPPVHLKMLDKITSKNQ----YIA-------------------------------------NLCFRGAAKTTLFMEYFTLFLAVFGHLP---SLGKVEGMIYVSDSMDNGVKSARKNIEFRYNNSPFL-QQWIPKATFTDNYL----EFVNAEGHR--LGV----------------------------------KMFGAKTGL----RGTKIFGKRPVLCVLDDLVSDDDARSRTSMEAIKDTVYKGVNHAL-------------DPTRRKVIFNGTPFN-KEDILI---------EAVESGAWDVNV----WPVCEKFPC-TREEFQGAWEDRFSYDYIN--DQYQMALKTGKLASF--YQELMLRISSED-----ERLIQDSEIKW----------------YSRTQLLRLRSCYNFYITTDFATSEKQ----------------------VSDYSVISVWAYGSNGDWF---------------------WVDGIACRQTMDK-------NFDDLFRLVQEYQ-PQ-QVGVETTGQQGGFISLLQKEMLNR--NVFFNFASSRGGQ------------PGIHPVTSKLSRFNLVVPWFKAGKMYF-------PAEMKDSPIMTLFMGQIRLATING------------LKGKDD----------CIDTISMLGYLN--PWKPQAGMVPVNTS------------GDPLWDDGDDTGSVNPLSSYIV-------------
	Escherichia_virus_186_AAC34148              ------MTISTDTTLLHDPR-RQASLLYWQ--GFSVPQIAEMLQVKRPTVQSWKQRDG------WDGIAPISRVESSLEARLIQLIAKPQKSGGDFKE-------------------------------------IDLLGRQIERLARVNRYSQTGNEADLNP-NVANRNKGER-KKPKKNFFSDEAIEKLEELFFD-QSFE-YQLQWYRAGLAHRIR---DILKSR---------------------------------------------QIGATFYFSREALLRALKTGHNQIFLSASKTQAYVFREYIIQFARLVDVDLTGDPIVI----------GNNGAKLIFLGTNSN-TAQ-------SHNGDLYVDEIFWIPNFQKLRKVASGMASQ-KHLRSTYFSTPSTLA------HGAYPFWSGELFNKG--RSRIADRIEIDISHRALAGGQLCDDGQWRQIVTIEDALAGGCTLFDLDQLKRENSDEDFKNLFMCEFVDDK--ASVFPFEELQRCMVDVMEEW-EDFAPFADHPFGSRPVWIGYDPSHTGDSAGCVVLAPPVVSGGKFRMLERHQWKGMDFAAQADGIRKLTEKYS-VE-YIGIDATGLGLGV--------------------------------------FQLVRSFYPAARGIRYTPEMKTAMVLK-------AKDTIRRGCLEYDAGATDVTQSFMSIRK--------TMTSSGRSATYE----ASRTEEASHADI--AWATMHALLN----------------EPLSAGSGIQPKSILEFN-----------------
	'Escherichia virus HK022 NP_037663'         ----------------------------MTRGERVIAFIERFCIVPEGKLIGQPMRLD------TFQKEFILAVYDNPAGTDMAI--------------------------------------------------LSIARKNGKTGLIAGILLAHLVGPEAVQ--------NTQIVSGALSREQAAIVFNLAVKMVNLNPKL-QEIVHITPSGKKLIGLPCNVEYKALSA--EGK----------------------------------TTHGLSPILAI--LDETGQVRGPQDDFIDAITTAQGAHENPLLIVISTQAAND------------------ADLLSIWIDDAVKSK-DPHIVCHVYEAPKDADISKRESWLAAN------PALGTFR-SEKDMARQAEKAGRMPSFE--NTFRNLNLNQRVSTV--SPFISRSVWELC-----GEMPINTPRKWYA-------------------GLDLSARNDLTALVIAGEADDG----------------------------------VWDVFPFFWTPQKTLEERTKTDRAPYDVWVREGLLRTTPGA-------SVDYSFVVADIAEIIG-DFDLTSIAFDRWRIDQFRKDADAI---------------------------GLSLPLVEFGQGFKDMGPAVDTLESLM-----------LNGRVRHGMHPVLTMCAVNAVV----------VKDAAGNRK-------LDKSKATGRIDG--MVAMTMSVGAANG-------------EVTEQGGDFDDFIFRPLSM----------------
	'Escherichia virus HK97 NP_037698'          ----------------------------MTRGERVIAFIERFCIVPEGKLIGQPMRLD------PFQKDFILAVYDNPAGTDMAI--------------------------------------------------LSIARKNGKTGLIAGILLAHLVGPEAVQ--------NTQIVSGALSREQAAIVFNLAVKMVNLNPKL-QEIVHITPSGKKLIGLPCNVEYKALSA--EGK----------------------------------TTHGLSPILAI--LDETGQVRGPQDDFIDAITTAQGAHENPLLIVISTQAAND------------------ADLLSIWIDDAVKSK-DPHIVCHVYEAPKDADISKRESWLAAN------PALGTFR-SEKDMARQAEKAGRMPSFE--NTFRNLNLNQRVSTV--SPFISRSVWELC-----GEMPINTPRKWYA-------------------GLDLSARNDLTALVIAGEADDG----------------------------------VWDVFPFFWTPQKTLEERTKTDRAPYDVWVREGLLRTTPGA-------SVDYSFVVADIAEIIG-DFDLTSMAFDRWRIDQFRKDADAI---------------------------GLSLPLVEFGQGFKDMGPAVDTLESLM-----------LNGRVRHGMHPVLTMCAVNAVV----------VKDAAGNRK-------LDKSKATGRIDG--MVAMTMSVGAANG-------------EVTEQGGDFDDFIFRPLSM----------------
	'Escherichia virus Lambda NP_040581'        -----------------MNISNSQVNRLRHFVRAGLRSLFRPEPQTAVEWADANYYLP------KESAYQEGRWETLPFQRAIMNAMGSDYIREVN---------------------------------------VVKSARVGYSKMLLGVYAYFIEHKQRNT----------LIWLPTDGDAENFMKTHVEPTIRDIPSLL-ALAPWYGKKHRDN-----TLTMKRFTN--GRG----------------------------------FWCLGGKAAKNYREKSVDVAGYDELAAFDDDIEQEGSPTFLGDKRIEGSVWPKSIRGSTPKVRGTCQIERAASESPHFMRFHVACP---HCGEEQYLKFGDKETPFGLKWTPDDPSSVFYLCEHNACVIRQQELDFTDARYICEKTGIWTRDGILWFSSSGEEIEPPDSVTFHIWTAYSP---FTTWVQIVKDWMKTKGDTGKRKTF---VNTTLGETWEAKIGERPDAEVMAERKE-----HYSAPVPDRVAYLTAGIDSQLDRYEMRVWGWGPGEESW-LIDRQIIMGRHDDEQTLLRVDEAINKTYTRR-------NGAEMSISRICWD-TG-GID-PTIVYERSKKHGLFRVIPIKGASVYGKPVASMPRKR-----------NKNGVYLTEIGTDTAKEQIYNRFTLTPEGDEPLPGAVHFPNNPDIFDLTEAQQLTAEEQV----------EKWVDGRKKIL-----WDSKKRRNEALD--CFVYALAALRISISRWQLDLSALLASLQEEDGAATNKKTLADYARALSGEDE---------
	'Escherichia virus Mu NP_050632'            --------------------MNTRENNLKALHAPRKINLREEAGLLGVDIVTDIGEAQ------PRNEPVFLGYQRRWFEDESQICI------------------------------------------------AEKSRRTGLTWAEAGRNVMTAAKPKRRG-------GRNVFYVGSRQEMALEYIAACALFARAFNQLA-KADVWEQTFW--------DSDKKEEIL--TYM----------------------------------IRFPNSGFKIQALSSRPSNLRGLQGDVVIDEAAFHEALDELLKAAFALNMWG-------------------ASVRIISTHNGVDNL---------FNQYIQDAREGRKDYSVHRITLDDAIADGLYRRICYVTNQPWS-----------PEAEKAWRDGLYRNAPNKESADE-----------EYGCIPKKSGGAY--------------LSRVLIEAAMTPARDIPVLRFEAPDDF----------------------------ESLTPQMRHGIVQDWCEQELLPLLDALSPLNKHVLGEDFARRGDLT--------VFVPLAITPDLRKRECFRVELRNVTYDQQRQILLF--ILSRLPRFTGAAFDATGNGGYLAEA------ARLIYGPEMIDCISLTPAWYQEWMPKL-------KGEFEAQNITIARHQTTLDDLLHIKV----------DKGIPQIDKGR-----TKDEGGKGRRHGDFAVALCMAVRASYMNGFVIDEDSIQALPPRHRGDDVDNDDFDDYHQFERGGW----------
	'Escherichia virus N15 NP_046897'           -----------------MIISTSQVANLRTAVKAGLKSLYRPEPMTAVEWADAHYYLP------KESAYQEGRWETLPFQRAIMNAMGSDYIRIVN---------------------------------------VIKSARVGYSKMLLGVIAYFIEHKQRNE----------LLWLPTDGDADNFMKSHVEPTIRDVPSLL-SLAPWYGKKHRDN-----TLSMKRFTN--GRG----------------------------------FWCLGGKAAKNYREKSVDVVGYDELAAFDADIEKEGSPTFLGDKRIEGSVWPKSIRGSTPKLRGTCQIERAAKESGHFMRFHVACP---HCGEEQYLKFGDRDTPFGFKWEPEQAETVYYLCEHNACVIKQHELDFSNARYICELTGIWTRDGLRWFSSSNAEIDPPESVTFHIWTAYSP---FTTWVQIVKDWFKTKGDTGKRKTF---VNTTLGETWEAKIGDRPDADVLAERKE-----HFDAAVPERVAYLTAGIDSQLDRYEMRVWGWGPGEESW-LIDRQIIMGRHDDESTLARVDEAINKTYTRR-------NGVEMSISRICWD-IG-GID-PTIVYNRSKKHGLFRVIPIKGASVYGKPVANMPRKR-----------NKNGVYLTEVGTDTAKEQIYNRFTLIVEGDEPLAGAVHFPNNPDIYDLSEAQQLTAEELV----------EKWVDGKRKII-----WDSKKRRNEALD--CFVYALAALRISISRWQLNLDSLLASLLEEEGTRNNNKTLADYARALSGEE----------
	Escherichia_virus_P2_AGG36517               ----------------------------------MTRPYEKLEQIFFEQSFDYQLH--------WYRAGLEHRIRD-----------------------------------------------------------ILKSRQIGATFYFSREALLRALKTGHNQ----------------------IFLSASKTQAYVFREYI-IEFARL-----------------------VDV----------------------------------DLTGDPIVL--------------------------------------------------------------GNNGAKLIFLGTNSN--------TAQSHNGDLYVDEIFWIPNFQILRKVASGMASQ-SHLRSTYFSTPSTLA------HDAYPFWSGELFNKG--RSRIAERVEIDVSHNALAGGLLCADGQWRQIVTIEDALKGGCTLFDLDQLKRENSADDFKNLFMCEFVDDK--ASVFPFEELQRCMVDTLEEW-EDYAPFAANPFGSRPVWIGYDPSHRGDSAGCVVLAPPVVAGGKFRILERHQWKGMDFATQAESIRKLTEKYN-VE-YIGIDATGLGVGV--------------------------------------FQLVRSFYPAARDIRYTPEMKTAMVLK-------AKDVIRRGCLEYDVSATDITSSFMAIRK--------TMTSSGRSATYE----ASRSEEASHADL--AWATMHAL------------------LNEPLTAGISTPLTSTILEFY--------------
	'Haemophilus phage SuMu YP_007002934'       --------------------MAGDGFCLQLCSLGEVVKSKEFLQQLSAYAESMRAKIE----------AAFDGWDDSPQAVAERRK-------------------------------------------------QVSDPVNGLAFFINHYFPHYVRSPSKSQLHRYLFERLPKVFASEKSCLEAIAAPRGEAKSTIVTQLS-TLWCLVTQKK--------RYALLVMDS--IDQ----------------------------------AYPMLEAIKSELEFNQRLRIDFPEIAGAGRVWQSGTIITRANQKVQVAGSG--------------------KKLRGLRHGAYRPDLVILDDIENDEQVRNPEQRDKLHNWLKKTVLPLGSADGKLDVIYIGTILHYDSVLSR-------TLASKAWNTAHFKAVLKMPDNMVLWDKWEHFYLTEGEAVADAFYFANQAE-----------MDKGAVVSWEARPILALMKIRARDGHA------------------TFDSEYQNDPVSGDDAIFANSLQYW--------TELPDDLIYFGALDPSMGKAGASR---------DPSAILVGGYHRASGKLYVVEAQIKKRLPDLIIEDVIRLHTQYQCHKW------------------FVETVQFQEFLQTELVKRSAQRGKPVP-------AMAVKPNTDKMLRIESLQPHIANGLILI--------HRSQSTLESQLR----HFPKADHDDGPD--ALEMLWRNAVTASAPIE---------WESIEDEDWEYRSKWRH------------------
	Hamiltonella_virus_APSE1_AAF03961           --------------------------------MFKPKRIKVYFGGRGGMKTVSFAKIA-----------------------------------------------------------------------------LITASMHKRRFLCLREFMNSIEDSGHAV------------------LQAEVETLGLQNRFRILNTYI-------------------EGINDSIFK--YGQ----------------------------------L------------ARNIASIKSKHDFDVAWVEEAETVSEKSLDSLIPTIR---------------------KPGSELWFSFNPAEE-DGAVYKRFVKPY--KELIDTQGYYEDDDLYVGKVSYLDNPWLPAELKNDAQKMKRENY----KKWRHVYGGECDANY--EDALIQPEWVE---------------------------------AAIDAHIKLGFKPSGIRVVTFDPADSG-----------------------QDEKALSKRYGVLIEDCVSWSEGDVADATMTAFDDAFDYRADDFIYDNIGLG-------AGTVKTHLRHSND----GNKMVVTGFGAGDSPDYPDEIYVPGNGEYLPSSNNDDRTH-----------RDTFRNKRAQYWVYLADRFYKTWRAVE------KGEYLDPDALISLSSKIAKLSQLKSEL----------IKQQRKRTPGNRLIQLMSKDEMRLKGIK--SPNMADTLMMS---------------FANPLRITEDTEIVVPSSSSWS-------------
	'Iodobacteriophage phiPLPE YP_002128452'    --------------------------MESINGSHLIQRIRERCEEDFKFFVRYFFKSV------KGTKFVLSDHHDVICDALEDVFYGRTSYLI-----------------------------------------INMPPRYSKTEIAVKMFTAWCYVKNPKC----------DFIHLSYADILALDNSETVKQIIKSTEFK-QLWPDLVIKPNK------DSKKAWGTE--QGG----------------------------------VFYATSAGGPITGFGAGKMNDFVDGNGFGGAIIID------------------------------------DPLKPDDAYSDPKRE------------------SVNRRWDETI-----KSRFNSRKTPCIVIMQRIHELDFCGMLL--KDSEYKFKHLVLPAIV------------------DEGKVTERPLWPAK-------------HDLPALYAMRAKNSYMFASQMQQMPAP------------------------------LGGGIIKGAWFKR--------YSVLPPIKYKAVFVDTAQKAGEHN-------DYQVAELWALGED--G-NLYMVDILRDKFMAYELETRIP----DFWNKHKADKNGR------------LRYMAVEDKSSGTELIQKIQHKLKPRI---------PIRAIPRGPKSNKLTRVMDVQGYIESGYIYLPDNAPWVSEFIAECE----SFTADDTHAHDD--QIDPMC--------------------DAISQMLHNTRPNIADIL-----------------
	'Klebsiella phage JD001 YP_007392855'       ---------------------------MNFDSPKELKLLRLALEEDFTLFARFFFKVL------KGTKFVFSDHHHVICDALMDVFYGRTTHLI-----------------------------------------INMPPRYSKTELAVKLFSAWCYVKNPKC----------EFIHLSYADILALDNSESIKSVLKSEEFQ-KLWPHVAIKANK------DSKKAWGTD--QGG----------------------------------VFYATAAGGPITGFGAGKLDDFENGNGFGGAIIID------------------------------------DPLKPDDAYSDPKRN------------------GVNRRWDETI-----KSRFNSTKTPCIVIMQRLHEEDFCGTLL--KDEEYNFRHLVLPAIV------------------DEGLPTERALW---PQK----------HSLEALKAMQKKNSYMFSGQMQQRPSP------------------------------LGGGILKGSWFGR--------YTVVPKLKYKAVFIDTAQKAKEHN-------DYQVAELWGLGED--G-YLYLLDVMRDKFEAYELEVKIP----DFWNKHRNDKNGR------------LRYMAVEDKSSGTELIQKIRRKIKPVI---------PVREIPRGPAANKLTRVMDVQGYIESGYVKIPEDAPWVHDFVTECE----AFTADDTHAHDD--QIDPMC--------------------DAISQMLHNGKATVSEIL-----------------
	'Listeria virus A511 YP_001468454'          -----------------------------------------------------------------------------------------------------------------------------------------MGVGSMIHFADTHSYAAVKCLY----------------TFPTGEQMRKFVQSRLD------PVLE-SSYYSSILDKDNNSL---NYKRIRNSH--LYF----------------------------------RTSSKPGAVEGVDIDYLSMDEYDRVPVFSEASALESMASSPFKIVRRWST---------------------PSAPGMGIHRLFENS-DQHWYLHKCEKCNHWNQLDYEDYDSSSVEAGGNILCVNPQ-GVDTLAKTVVEGSFQFVCKKCGAPLDRWYNGEWVAK--HPDRTKNGDGIR-----GYMISQMNAVWISADD-----------LKRKELNSLSKQAFFNYTLGYPFEDAKLAVYSEDIIENPSPRVKVPMHSRGDYKYISVGIDWGNTHWVSV----HGMTERGEIDLIRLFSVEKSRGVGNIES-------DLDKIILEVSMYN--P-DMIVADVGDSGNYVDKLVKHFGED--RVFGCIYKSSPKST-----------GQLKPQWNEAGNVVTVDKLMQNKRYII-------EMKTKKVNFYSFIDPMLKLLVDHWRNVV--------IQDEEDEKDG------TFYQVIGRRGDD--HLAQASVYSFIGLDRLADMYLRGSKYEFNSTFVTSNYQDVSSTPPDIFSKY----------
	'Phage MP22 YP_001469154'                   ---------------------------MNAEEKEFLRELSAMAQQLRRDIEAQQIGLD------SSPEARAERRRRVLVDRDFEFFAYTY-----FPH-------------------------------------HIRPPASLFHAHFFKRFPQLISSSSGLK----------EWWVAPRGEAKSSLLTKVGPCYVVVQGLLQRPEIRAELGMTGPAPYFVDYITLLGAE--TRL----------------------------------PTKLLEVVKTELLVNASLSLDFPEVCGKGSVWKIGEFVSLSGVKLEAFGAE--------------------QAIRGTFHGASRPKLLLGDDLITDKEAKSPTERNNRWDWLEKAIDYLGPPDGSVKYLGVGTVLNKDDPISRAKRTVGHLVHHFRAIETFPTHMDLWAHCEEVMLNDDKPVM-EQYAERGSVAPDSALPSFQFYQDNREQMELGAVTSWPGVRSLYWLMRQRAKNKA------------AFATELQGDPRSDEDKTFTNPRFWVMRSGRW---------------QMFGACDPSVGASA----------QSDPSAIIVGGWDTEKQVLNVIEAAIKRRVPSKLESDLIKAQREYQMRAIGFENN-------------GAFEIQRQNIAKAALMQRVALPLIGVT--------SMADQSVRIDAMEPFINDAFAPR------------ILFSPGLVALLDELDSWPEPQTGHHYDGLCALSILWMIASTRAGSFEFTAVPNRRNALEAGGLDDSFDTGGRFGGAW--------------
	'Pseudomonas phage 201phi2-1 YP_001956731'  ---------MDIVLFESDWERFRVYADFNTKNETFLKLAHLYRDELKVKNWKFHLALM------QPELSGVDPFADNLDRVTKAKIAYECKYNPWYYFREVARVPISGPVPSP-FLANRGNIALYWSFFNHINFGLLQPRQTGKSVSTDILMVGLMFIWGFKT---------EINLITKDARLRDANIRRLKGMRDLLPDYI---DMIDRNDVDNNEA---LSCIRLGNRYGTSVARNDVIAADKLGRGLTVPIMQFDEFAYISLIGTSLPVALAAGSAARRIARANRQFFGNIFTTTAGDITTRDGKFAHRFMTGGAVWTEAYLDLK------------DQATLELIIEKGTSGETPLIYG----AFNHRQLGFDDMWLYKT----LRESASSGEIADRDFFNIWTVGGEGSPLL--DHHKKILKEAMSEPMANISDENGYLLRWYI----PEHMIADRMARCKVV------------MGCDPSELLGAGNDSTGIVGIDTETHEVLFTGRYNETSVPILASFIANLLIKYENIT-WVPERKSTGISLIDMVILVLHSKGICPFRRIFNRVVDESNILETEYEILR-TTPVSQRTPQFYDRFKRHFGFNTSGGGRYSRNALFKDSLSNSIDVGGRVMNDNQLITELLGLVI----KNGRIDHDTDKHDDMVVSMLLAHWTCIRGQNLDYYGINPKTIFVKARTRDVEPTNVEVFRDNQNAKYRAEFDDLIVRLKGEPNRMLATKLEMRLRAIS--RWIDVDEAHGMGIDAMIQQVHDERVRRVRSNRFGDSSRNAPARFTGQRAIV----------
	'Pseudomonas phage B3 YP_164067'            ---------------------------MKR--KGNAKVIPANPDAIFLPYQSRWITDP------SR-----------------------------LKL-------------------------------------MQKSRQIGLSWSTAYAAGERTAAESARV------------------DQWVSSRDDLQARLFLEDCKM-WAGIMNQAAKDLGEI---VIDVKNKIS--AYV----------------------------------LEFANGRRIHS-MSSNPDAQAGKRGGRILDEFALHPDPRKLWSIAYPGITWGGAME-IISTHRGS------QNFFNQLVREIVEGG-NPKNISLHTVTLQDALNQGFLFKLQQMLP------------ADDEIQGMDEAQYFDFIRAGCADEESFQQEYMCNPA--DDDVAFLEYDLI-----ASAEYPQTANWQQ-------------------------PEGGRLFAGVDIGRKK--------------------------DLTVLWILELLGD---------------------VLYTRHVERLQNMRK-------SAQEAILWPWFQR-CE-RICIDATGLGIGWADDAQDQFGEH---------------------------RVEAVTFTPRVKEALAYPIRGAMEDHK-------VRIPYDPKIRAALREVTKQTTAAGNIRFTA------ERTADGHADEF-----WALGLAIHAASG--LVDMPIDYQSAGTRTQLN--------DYVSTPGGIIVPHGFGAVRGNNDFGGY--------
	'Pseudomonas phage D3112 NP_938233'         --------------------------------------MKGSTRDFLADIAQLAGEFR------RQIEAEVAGFDPDPKASAARRERASADY-------------------------------------------EYFARTYFPHYVKRGNALLHDYLYKRLP----------ELVDHPDGQHEAIAAPRGNAKSTLVSQIF-VIWCVLTGRK--------HYPLIIMDA--FEQ----------------------------------AATMLEAIKAELEFNPRLAMDFPQGAGKGRVWQVGTIVTANDAKVQVFGSG--------------------KRMRGLRHGPHRPDLVVGDDLENDENVRSPEQRDKLENWLKKTVLSLGSADDTMDVIIIGTILHYDSVLSR-------LLKNPLWKRRKFKAIIEWPHRMDLWEKW------EELLLNSDDEGVAALEFYQERAAA---MEDGAIICWPDGQPLYKLMVKRARDGH----------SAFDSEQQNDPVQGENAPFAACITFWVNRLAQW---------------MFYGACDPSLGKQGSSR-------DPSAILVGGFNRE-TG-VLDVVEAAIRKRLPDKIIEDIIAMQRAYHCLVW------------------GVEAVQFQEFLRTELVKRSAKAGCPVP-------ARAITPHADKLLRIESLQPHMANGLIRL--------HPSQTVLEQQLR----HFPAADHDDGPD--ALHMLWMLATTGFASMEFALVGRQG-TTSSGGFDDSFDVGGRMGGDW--------------
	'Pseudomonas phage phiCTX NP_490600'        MGGSICAMNAAVEIPIRDNR-RQAKFLYWM--GWRVCDIADHLGEKDKTLHSWKDRDG------WDRADSVERIGGALEARLVQLILKDGKTGGDYKE-------------------------------------IDLLHRQLERQARIQRYQGGGTETDLNPELAKRNEGPKR-KPKRNDISEELTEKLVEAFLDGCFDYQ-KDWYRAGNQRTRVIL---KSR------------------------------------------------QIGATFYFAREALIDALETGRNQIFLSASKAQAHIFKAYIQAFARDAVGVELKGDPIIL---------PNGAELHFLGTNART-AQ--------GYHGNFYFDEFFWTFKFKELNKVASGMAMQ-KRYRRTYFSTPSSMA------HEAYTFWTGERFNKG--KPAADRIKIDVSHDAL-QQGRLCEDRIWRQIVTILDAEARGCDLFDIDELRLEYDAEAFQNLLMCQFVDDG--ASIFPLTMLQPCMVDSWDLWSEDYKPFALRPFGDRQVWLGYDPAETGDTAGLVVVAPPAVPGGKFRVLERHQFRGKDFAEQAEFIRKVTQRYW-VT-YIGVDTTGMGSGV--------------------------------------AQLVRQFFPGVRTFSYSPEVKTQLVMK-------AWSVIKNGRLEFDAGWTDLAQALMAIRK--------TITAGGRQFTYT----AGRNDNTGHADL--AWALFHALQNEP--------------LEGQTPANTGRMEIFG-------------------
	'Pseudomonas phage phiKZ NP_803591'         ---------MDVILFNSDWDKYYSASVDLTTKNKSFIKLALTYKKMGIKNYKFILAIL------DQGLIGVDPYDPNLSEEMKFRINMECKYNPWYFFREVARIPPNSGNNPIPFQANRGNIALFWCYFNHVDFGLLQPRQTGKSVSTDVLNTGMMYIWGENT---------KINLITKDNKLRNANIERLKVMRDLLPEYI---HYTDPLDADNSEL---MTCIRLGNRYLTAVGRNDVNAADKLGRGLTVPNMHFDELAYINLIGVSLPVALASGSAARDEARRENQPYGNIYTTTAGNITTRDGEFAYHFLTGGCPWSEEFFDLP------------DQKTLHRVVEKGTTGKKPLVYG----AFNHRQLGRTDEWLYNT----LRESGSFGEIADRDFFNIWTVGGEGSPLS--SDEKDKLKNNMREPS--WTEITDDGYTLRWYIPKEEVASRMMKGRFV--------------MGTDPSELLGEDNDATGTVVVDVETHEVMCVGRYNESSVPSMGNFFATMLLRYPNIL-WIPERKSIGISLIDHVILILHTKGVDPFRRIFNRIVNESSERENDFRDI--QTPLSARQPSFYDRFKRYFGYATSGTGEYSRDNLFKVALPSAMHYGVRTIYDKPLSTELLALTI----RNGRIDHAKGNHDDLVVSLLLAHWLLIQGK----NLSYYGINVPILGKSKLRDKEPSQLEKYHE------EKEQQGRKEFEE----IIEQLRGEKNPM--IAAKLEMRLKQLSKRVNIDDSSGVGIDAMLNQARAERTRRVRINRYSRNSWY---------
	'Rhizobium phage 16-3 YP_002117560'         -----------------------MAKKPMTRGERVIAFIERYCLVPEGTLLGKPVKLL------PFQRKFILAVYDNPAGTSRAY--------------------------------------------------LSIARKNGKTGLIACLLLAHIVGPEAYQ--------NGRIVSGARSRKQAAEVFNYAAKMVMMSTEL-SKLARIVPSAKMIVGLAKNVEYQASSA--EAK----------------------------------SAHGGSPILAI--LDEVGQIKGPTDDFVEAIETSQGAYEGRAMLFAISTQAATD-----------------NDLFSRWIDDAETSK-DPRIVSHIYTAPADCELDDREAWAAAN------PALGVFR-SVKDVEDFSLLASRMPTKE--ASFRWLFLNQRIDAS--APFVSPAVWRA------CDAPIVESFDG----------------LPVFGGLDLSEVSDLTSLVLMAPKESD-------------------------------AGTIWHVKPTFWLPGDALREKAKADRVPYDVWHGNGQLETTPGP-------TVDYEFVAHHLRGLFD-TLDIRKIAFDRWNWRHL---------KPWLQKAGFTEEQLD----------GDAAVFEQFGQGFASMSPALRDLESLI-----------LNRKIAHGGHPVLTMCMMNATV----------KPDPSGNRK-------LDKQKSRGRIDG--AVALAMAAAMAGTYE-----------GASAVYSPWDDPNFSIVAG----------------
	'Salmonella phage ST64T NP_720326'          -----------------------------------------------------MIREI-----------------------------------------------------------------------------AISAALVSRSYSTVELDAILDNLSDEEQ-------------IELLELLEEEENYRNTHLLYEFTPYS-KQREFIDAGHDYP-----ERCFMAGNQ--LGK----------------------------------SFTGAAEVAFHLTGRYPGTKGYPADGKYGGEWKGKRFYEPVVFWVGGETNETV------------------TKTTQRILCGRIEENDEP--------GYGSIPKEDIISWKKSPFFPNLVDHLLVKHHTPEGVEDGISICYFKPY----SQGRARWQGDTIHGV--WFDEEPPYSIY------GEGLTRTNKYGQFSILTFTPLMG----MSDVVTKFLKNPSKSQKVVNMTIYDAEHYTDEQKEQIIASYPEHEREARARGIPTMGSGRIFQIPEETIKCQPFECPDHFYVIDAQDFGWNHPQAHIQLWWD-------KDADVFYLARVWKKSE-NTAVQAWGAVKSWANKIP--------VAWPHDGHQHEKGG-----------GEQLKTQYADAGFSMLPEH---------------ATFPDGGNSVESGIGELRDLMLEGRFKV--------FNTCEPFFEEFR----LYHRDENGKIVK--TNDDVLDATRYGYMMRRFARMMR---DIRKPKEKKIPAPIRPVRRGR--------------
	Salmonella_virus_P22_BAG12600               ------------------------------------MELDAILDSLSDEEQIELLELL-----------------------------------------------------------------------------------------------------------------------------EEEENYRNTHLLYEFAPYS-KQREFIDAGHDYP-----ERCFMAGNQ--LGK----------------------------------SFTGAAEVAFHLTGRYPGTKGYPADGKYGGEWKGKRFYEPVVFWIGGETNETV------------------TKTTQRILCGRIEENDEP--------GYGSIPKEDIISWKKSPFFPNLVDHLLVKHHTPEGVEDGISICYFKPY----SQGRARWQGDTIHGV--WFDEEPPYSIY------GEGLTRTNKYGQFSILTFTPLMG----MSDVVTKFLKNPSKSQKVVNMTIYDAEHYTDEQKEQIIASYPEHEREARARGIPTMGSGRIFQIPEEAIKCQPFECPDHFYVIDAQDFGWNHPQAHIQLWWD-------KDADVFYLARVWKKSE-NTAVQAWGAVKSWANKIP--------VAWPHDGHQHEKGG-----------GEQLKTQYADAGFSMLPEH---------------ATFSDGGNSVESGISELRDLMLEGRFKV--------FNTCEPFFEEFR----LYHRDENGKIVK--TNDDVLDATRYGYMMRRFARMMR---DIRKPKEKKIPAPIRPVRRGR--------------
	Shigella_phage_Sf6_AAQ12192                 --------------------------------------MTSINPIFEPFIEAHRYKV------------------------------------------------------------------------------AKGGRGSGKSWAIARLLVEAARRQPVRI-------------------------LCARELQNSISDSV-IRLLEDTIEREGY-----SAEFEIQRS--MIR----------------------------------HLGTNAEFMFYGIKNNPTKIKSLEGIDICWVEEAEAVTKESWDILIPTIR---------------------KPFSEIWVSFNPKNI-LDDTYQRFVVNPPDDICLLTVNYTDNPHFPEVLRLEMEECKRRNP-----------------TLYRHIWLGEPVSAS--DMAIIKREWLE------AATDAHKKLGWKA----------------KGAVVSAHDPSDTGPDAKGYASRHG-----------------------SVVKRIAEGLLMDINEGADW-----ATSLAIEDGADHYLWDGDGVGAGLRRQ-------TTEAFS-----------GKKITATMFKGSESPFDEDAPYQA--GAWADEVVQGDNVRTI---------GDVFRNKRAQFYYALADRLYLTYRAVVHGEYADPDDMLSFDKEAIGEKMLEKLFAELTQIQR--------KFNNNGKLE-------LMTKVEMKQKLG--IPSPNLADALMMC-------------MHCPALVREETEIYVPSSSGW--------------
	'Vibrio phage KVP40 NP_899601'              --------------------MSSQKKKFKKKTINGIKYVQSNEDMQWYPRYLDDWKVL------NRMDKAHKLRIQSTDPSDFKTYKDKGNRRSRYMN-------------------------------------IPNLRRANAPIRFGAPLSEIKAEFQKCR----------DDIVYFAENYCSIVHIDLGNIKMVPRPYQ-KEMLEVADRSRFSIF---LLPRQLGKT--TIM----------------------------------GIFLAHYLVFNEDKEAGILAHKGSMSMEVLERVKNVIENLPDFLQPGIEEWNKGNITF-------------DNGCKLGAYASGSDAVRGKSFSMIYVDECAFVPGFDDFWKATF-----PVISSGEESKVVLTSTPNGLNHYHDMWN--AAVQGISTFEPYTTT--WRAVQNRLY--------KDGEFDDGEAFKRETIGNTSREA----FSQEHLCNFLGTAGTLINGFKLSKMKG-------IDVVKDSDGWCVYKKPEEGHKYILTVDTSEGRGQDY----HALHMIDVTSYPFEQVAVFHDNKTSHLL-------LPAIIMKQAYRYN-EA-YVYCEIASTGELVMNELFRDLEYE--NVIMEERASGGRRGLGLKPNKKTKAIGCSTLKDLIEKDQLKINHIPTLKEFH--------TFVEKGKSWEAEEGFHDDLVMSLTLLAY-------LSTQDRFSDFVEKEYNVSYDIFKQEVHD--MMDDDVPFLMIAD-------------GIENYGTDFSTNSFGMF------------------
	'Yersinia phage phiYeO3-12 NP_052122'       -------------------M-SDTQANRNA--LIIAQLKGDFVAFLFVLWKALALPPP------TKCQIDMARCLANGDNK--------------KFI-------------------------------------LQAFRGIGKSFITCAFVVWTLWRDPQLK----------I-LIVSASKERADANSIFIKNIIDLLPFL-AELKPRPGQRDSVISFD-VGPAKPDHS--PSV----------------------------------KSVGITGQL----TGSRADIIIADDVEIPSNSATQGAREKLWTLVQEFAALLK------------------PLPTSRVIYLGTPQT-EMTLY---------KELEDNRGYTTII----WPALYPRSREEDLYYGDRLAPMLREEF----NDGFEMLQGQPTDPV--RFDMEDLRERELEY---GKAGFTLQFMLNPNLSDAEKYPLRLRDAIVCGLDFEKAPMHYQWLPNRQNRNEELPNVGLKGDDIHSYHSCSQNTGQYQQRILVIDPSGRGKDETGY------AVLFTLNGYIYLMEAGGFRD-------------GYSDKTLESLAKK-AK-QWKVQTVVFESNFGDGMFGKVFSPVLLKHHAAAMEEIRARGMKELRICDTLEPVLSTHRLVIRDEVIREDYQTAR----------DADGKHDVRYSLFYQLTRMAREKGAVAH--------DDRLDALALGVE----FLRSTMELDAVK--VEAEVLEAFLEEHME-----------HPIHSAGHVVTSMVDGMELYWEDDDVNSNRFIDW-
	Yersinia_phage_PY100_CAJ28416               ----------------MNEK-HLSNAIRFA--LMKEAQIRKARTCFLTFRRVMHPEQI------WDAPF-----PQAVCAKLQDFYEKWMNGERPKMI-------------------------------------LSTPPQHGKSVAVTDFCCWIAGKHPDKK----------------------AIYASFSERLGRRANMA-IQQMMDSEKFKEIFP---DSRIKTKGE--PET----------------------------------ADAQRGVDLIE-----YISPVTGKHGGYFRNVTIKGAVT--------------------------------GESLDIGIIDDPLRD-RKE-------ANSELVRDNIWEWYTDAFL----TRFHKDA-PLLMILTRWHIDDLAGRIL---EKEKNVDYVRFPA-----------------------IAEKDEGWRK-----------------EGEALFEEWKPLSFLLERKSVTPP-----------------ANWEALYQQNPIIAGGEMFRDEWWQY-----YDQSTPLPEFEYRIIYADTAQKVKEHN---------DYSVFQCWGYH-QG-KIYLLDMLRGKWEAPDLLVKAK----EFWQKHRDPTNRGY-----------LRAFKVEDKASGTGLIQQLQRNGGVPV--------VGIPRGTDKVSRANDVIPQVQAGNVILPAN-----APWLDDMMAELT----AFPNGVHDDTVD--PLMDAITDMLMS--------------GWVNWLSQWG-------------------------
;
END;


BEGIN TREES;
	Title Phamerator;
	LINK Taxa = Taxa;
	TRANSLATE
[0] 		1 Achromobacter_phage_JWDelta_AHC56597,
[1] 		2 Bacillus_phage_Basilisk_AGR46580,
[2] 		3 'Bacillus phage vB_BanS-Tsamsa YP_008873483',
[3] 		4 'Bacillus virus SPO1 YP_002300330',
[4] 		5 'Brochothrix phage A9 YP_004301396',
[5] 		6 Burkholderia_virus_Bcep22_AAQ54982,
[6] 		7 'Burkholderia virus BcepMu YP_024701',
[7] 		8 'Clostridium phage c-st YP_398598',
[8] 		9 'Enterobacteria phage 933W NP_049511',
[9] 		10 'Enterobacteria phage CUS-3 ABQ88401',
[10] 		11 Enterobacteria_phage_LP7_AAA88220,
[11] 		12 Enterobacteria_phage_RB49_AAF23757,
[12] 		13 'Enterobacteria phage T3 NP_523347',
[13] 		14 'Enterobacteria phage T4 NP_049776',
[14] 		15 'Enterobacteria phage T7 NP_042010',
[15] 		16 'Erwinia phage phiEaH2 YP_007237828',
[16] 		17 'Erwinia phage vB_EamP-S6 YP_007005834',
[17] 		18 'Escherichia phage N4 YP_950546',
[18] 		19 Escherichia_virus_186_AAC34148,
[19] 		20 'Escherichia virus HK022 NP_037663',
[20] 		21 'Escherichia virus HK97 NP_037698',
[21] 		22 'Escherichia virus Lambda NP_040581',
[22] 		23 'Escherichia virus Mu NP_050632',
[23] 		24 'Escherichia virus N15 NP_046897',
[24] 		25 Escherichia_virus_P2_AGG36517,
[25] 		26 'Haemophilus phage SuMu YP_007002934',
[26] 		27 Hamiltonella_virus_APSE1_AAF03961,
[27] 		28 'Iodobacteriophage phiPLPE YP_002128452',
[28] 		29 'Klebsiella phage JD001 YP_007392855',
[29] 		30 'Listeria virus A511 YP_001468454',
[30] 		31 'Phage MP22 YP_001469154',
[31] 		32 'Pseudomonas phage 201phi2-1 YP_001956731',
[32] 		33 'Pseudomonas phage B3 YP_164067',
[33] 		34 'Pseudomonas phage D3112 NP_938233',
[34] 		35 'Pseudomonas phage phiCTX NP_490600',
[35] 		36 'Pseudomonas phage phiKZ NP_803591',
[36] 		37 'Rhizobium phage 16-3 YP_002117560',
[37] 		38 'Salmonella phage ST64T NP_720326',
[38] 		39 Salmonella_virus_P22_BAG12600,
[39] 		40 Shigella_phage_Sf6_AAQ12192,
[40] 		41 'Vibrio phage KVP40 NP_899601',
[41] 		42 'Yersinia phage phiYeO3-12 NP_052122',
[42] 		43 Yersinia_phage_PY100_CAJ28416;
	TREE Tree1 = ((((((((14:0.00311,13:0.00284)1000:0.22637,38:0.22502)1000:0.22661,((17:0.26732,7:0.26481)1000:0.16143,32:0.42681)975:0.0199)666:0.00629,((21:0.05771,10:0.06186)1000:0.14854,36:0.20514)1000:0.248)767:0.00814,((((24:0.15672,22:0.15567)1000:0.08382,41:0.24039)1000:0.19738,((37:0.20335,33:0.20084)1000:0.12949,27:0.33411)1000:0.10386)999:0.02425,((15:0.06412,18:0.064)1000:0.38037,((31:0.28499,5:0.27987)1000:0.12083,3:0.40607)996:0.04226)990:0.01861)576:0.00367)773:0.00439,((8:0.43521,2:0.43011)919:0.01701,4:0.44719)977:0.01855)639:0.00436,(11:0.38205,6:0.38455)1000:0.0819)348:0.00135,(((23:0.0106,42:0.01158)1000:0.06104,25:0.07377)1000:0.36748,((12:0.01536,40:0.01449)1000:0.2925,9:0.30205)1000:0.1347)980:0.02134,(((((19:0.11926,1:0.11848)1000:0.06109,26:0.17988)1000:0.24502,((34:0.22174,28:0.22229)1000:0.09561,35:0.3225)1000:0.09656)973:0.01743,((29:0.12188,30:0.11671)1000:0.26658,43:0.38989)1000:0.0481)1000:0.02526,((20:0.00664,39:0.00739)1000:0.10238,16:0.1085)1000:0.3534)520:0.00507);
END;