#NEXUS [written Wed Aug 24 15:25:44 AEST 2016 by Mesquite version 3.10 (build 765) at WL7L21562/10.194.176.52] BEGIN TAXA; DIMENSIONS NTAX=20; TAXLABELS Epichloe_festucae_var._lolii_SE Epichloe_festucae_JN167226 Epichloe_typhina_JN182231 Festuca_arundinacea_Taxonomic_Group_5_NEA19 Festuca_arundinacea_Taxonomic_Group_5_NEA18 Festuca_arundinacea_Taxonomic_Group_4_NEA33 Festuca_arundinacea_Taxonomic_Group_2_NEA17_GC1 Festuca_arundinacea_Taxonomic_Group_2_NEA17_GC2 Festuca_arundinacea_Taxonomic_Group_2_NEA32_GC1 Festuca_arundinacea_Taxonomic_Group_2_NEA32_GC2 Epichloe_coenophiala_NEA22_GC1 Epichloe_coenophiala_NEA22_GC2 Epichloe_coenophiala_NEA20_GC1 Epichloe_coenophiala_NEA20_GC2 Epichloe_coenophiala_NEA16_GC1 Epichloe_coenophiala_NEA16_GC2 Epichloe_coenophiala_NEA14_GC1 Epichloe_coenophiala_NEA14_GC2 Epichloe_coenophiala_E34_GC1 Epichloe_coenophiala_E34_GC2 ; END; BEGIN CHARACTERS; DIMENSIONS NCHAR=1362; FORMAT DATATYPE = DNA GAP = - MISSING = ?; MATRIX Epichloe_festucae_var._lolii_SE ATGGTATTGGCAAAGACACTCCACCAGGAAGTTTATCAAACCCTCAGCGAAACATTTGACTTTGCCAACAATGACCAGAGGCTATGGTGGCACAGCACGGCGCCAATGTTCCAAAAGATACTCCAAACTGCTAACTATAGCATTTATGCTCAGTATCAACATCTGAGCATTTATAAAAGCCATATCATTCCTTTTCTTGGTGTCTATCCGACAAGAAGTGGCGAGCGGTGGCTAAGCATTCTTACGAGATACGGAACCCCGTTTGAGCTAAGTCTTAATTGCTCTGACTCCATAGTTCGGTATACATACGAGCCTATTAACGCCGCAACTGGCAGCCATCTGGATCCGTTCAACACTTTCGCTATCTGGGAGGCTCTAAAAAAGCTTATAGATTCCCAGCCAGGCATAGACCTTCAATGGTTTTCCTACTTTAAACAAGAGCTTACACTTGACGCAAACGAGTCCACGTACCTGCACTCTCAAAACTTGGTCAAGGAACAGATCAAAACTCAAAACAAGCTAGCGTTAGACCTTAAAGGTGACAAGTTCGTACTCAAGACCTACATCTACCCCGAATTGAAGTCCGTCGCAACTGGTAAATCGGTCCAGGAGCTTGTGTTTGGCTCCGTCCGCAAGCTAGCGCAGAAGCATAAGAGTATCCGTCCTGCCTTTGAAATGCTAGAAGACTATGTCCAGTCTCGCAATAAAGTCCCTACCACGGATGACAGTCACAATACTCCATTATCTTCACGCCTTCTCTCTTGCGACCTGGTGAGTCCTACCAAGTCTCGTGTCAAGATCTACCTCCTGGAACGAATGGTCTCGTTGCCAGCGATGGAAGATCTTTGGACGCTTGGCGGCCGTCGAGAAGATCAGTCCACTATTGAGGGATTGGAGATGATCCGAGAACTTTGGGGTCTCCTTAACATGTCTCCTGGTTTGCGCGCCTACCCTGAGCCTTACTTGCCCCTCGGCGCCATTCCCAATGAGCAACTTCCGTCCATGGCCAATTACACCTTACACCATAATGATCCGATACCAGAACCGCAAGTGTACTTTACTGTGTTCGGCATGAATGATATGGAGGTGACTAATGCACTCACGAAATTCTTCATGAGGCATGAATGGAGCGATATGGCAAGTAAATACAAAGCCTGCCTTAGGGAATCTTTGTAGGTGATATCCTAGTTCTCACATTGCATGACAAGAATTACTAACAT--AAAAATCGCTTGGCAGCCCGCATCATAATTACGAAGCCCTAAATTATATCCACTCGTACATTTCCTTCTCCTACCGAAATAACAAGCCATATTTAAGTGTGTATCTCCACTCATTTGAAACTGGTGAATGGCCTGTGTGT Epichloe_festucae_JN167226 ATGGTATTGGCAAAGACACTCCACCAGGAAGTTTATCAAACCCTCAGCGAAACATTTGACTTTGCCAACAATGACCAGAGGCTATGGTGGCACAGCACGGCGCCAATGTTCCAAAAGATACTCCAAACTGCTAACTATAGCATTTATGCTCAGTATCAACATCTGAGCATTTATAAAAGCCATATCATTACTTTTCTTGGTGTCTATCCTACAAGAAGTGGCGAGCGGTGGCTAAGCATTCTTACGAGATACGGAACCCCGTTTGAGCTAAGTCTTAATTGCTCTGACTCCATAGTTCGGTATACATACGAGCCTATTAACGCCGCAACTGGCAGCCATCTGGATCCGTTCAACACTTTCGCTATCTGGGAGGCTCTAAAAAAGCTTATAGATTCCCAGCCAGGCATAGACCTTCAATGGTTTTCCTACTTTAAACAAGAGCTTACACTTGACGCAAACGAGTCCACGTACCTGCACTCTCAAAACTTGGTCAAGGAACAGATCAAAACTCAAAACAAGCTAGCGTTAGACCTTAAAGGTGACAAGTTCGTACTCAAGACCTACATCTACCCCGAATTGAAGTCCGTCGCAACTGGTAAATCGGTCCAGGAGCTTGTGTTTGGCTCCGTCCGCAAGCTAGCGCAGAAGCATAAGAGTATCCGTCCTGCCTTTGAAATGCTAGAAGACTATGTCCAGTCTCGCAATAAAGTCCCTACCACGGATGACAGTCACAATACTCCATTATCTTCACGCCTTCTCTCTTGCGACCTGGTGAGTCCTACCAAGTCTCGTGTCAAGATCTACCTCCTGGAACGAATGGTCTCGTTGCCAGCGATGGAAGATCTTTGGACGCTTGGCGGCCGTCGAGAAGATCAGTCCACTATTGAGGGATTGGAGATGATCCGAGAACTTTGGGGTCTCCTTAACATGTCTCCTGGTTTGCGCGCCTACCCTGAGCCTTACTTGCCCCTCGGCGCCATTCCCAATGAGCAACTTCCGTCCATGGCCAATTACACCTTACACCATAATGATCCGATACCAGAACCGCAAGTGTACTTTACTGTGTTCGGCATGAATGATATGGAGGTGACTAATGCACTCACGAAATTCTTCATGAGGCATGAATGGAGCGATATGGCAAGTAAATACAAAGCCTGCCTTAGGGAATCTTTGTAGGTGATATCCTAGTTCTCACATTGCATGACAAGAATTACTAACATATAAAAATCGCTTGGCAGCCCGCATCATAATTACGAAGCCCTAAATTATATCCACTCGTACATTTCCTTCTCCTACCGAAATAACAAGCCATATTTAAGTGTGTATCTCCACTCATTTGAAACTGGTGAATGGCCTGTGTGT Epichloe_typhina_JN182231 ATGGTATTGGCAAAGACACTCCACCAGGAAGTTTATCAAACCCTCAGCGAAACATTTGACTTTGCCAACAATGACCAGAGGCTATGGTGGCACAGCACGGCGCCAATGTTCCAAAAGATACTCCAAACTGCTAACTATAGCATTTATGCTCAGTATCAACATCTAAGCATTTATAAAAGCCATATCATTCCTTTTCTTGGTGTCTATCCTACAAGAAGTGGCGAGCGGTGGCTAAGCATTCTTACGAGATACGGAACCCCGTTTGAGCTAAGTCTTAATTGCTCTGACTCCATAGTTCGGTATACATACGAGCCTATTAACGCCGCAACTGGCAGCCATCTTGATCCGTTTAACACTTTCGCTATCTGGGAGGCTCTAAAAAAGCTTATAGATTCCCAGCCAGGCATAGACCTTCAATGGTTTTCCTACTTTAAACAAGAGCTTACACTTGACGCAAACGAGTCCACGTACCTGCACTCTCAAAACTTGGTCAAGGAACAGATCAAAACTCAAAACAAGCTAGCGTTAGACCTTAAAGGTGACAAGTTCGTACTCAAGACCTACATCTATCCCGAATTGAAGTCCGTCGCAACTGGTAAATCGGTCCAGGAGCTTGTGTTTGGCTCCGTCCGCAAGCTAGCGCAGAAGCATAAGAGTATCCGTCCTGCCTTTGAAATGCTAGAAGACTATGTCCAGTCTCGCAATAAAGTCTCTACCACGGATGACAGTCACAATACTCTATTATCTTCACGCCTTCTCTCTTGCGACCTGGTGAGTCCTACCAAGTCTCGTGTCAAGATCTACCTCCTGGAACGAATGGTCTCGTTGCCAGCGATGGAAGATCTTTGGACGCTTGGCGGCCGTCGAGAAGATCAGTCCACTATTGAGGGATTGGAGATGATCCGAGAACTTTGGGGTCTCCTTAACATGTCTCCTGGTTTGCGCGCCTACCCTGAGCCTTACTTGCCCCTCGGCGCCATTCCCAATGAGCAACTTCCGTCCATGGCCAATTACACCTTACACCATAATGATCCGATACCAGAACCGCAAGTGTACTTTACTGTGTTCGGCATGAATGATATGGAGGTGACTAATGCACTCACGACATTCTTCATGAGGCATGAATGGAGCGATATGGCAAGTAAATACAAAGCCTGCCTTAGGGAATCTTTCC------------------------------------------------------------------CGCATCATAATTACGAAGCCCTAAATTATATCCACTCGTACATTTCCTTCTCCTACCGAAATAACAAGCCATATTTAAGTGTGTATCTCCACTCATTTGAAACTGGTGAATGGCCAGTGTTT Festuca_arundinacea_Taxonomic_Group_5_NEA19 ATGGTAATGGCAAAGACACTCCACCAGGAAGTTTATCATACCCTTAGCGAAACATTCGACTTTGCCAACAATGACCAGAGGCTATGGTGGCACAGCACGGCGCCAATGTTCGAAAAGATGCTCCAAACTGCTAACTATAGCATTGATGCCCAGTATCGACATCTGGGCATTTATAAGAGCCATGTCATTCCTTTTCTTGGTGTCTATCCTACAAGAAGTGGCGAGCGGTGGCTAAGCATTCTTACGAGATACGGAACCCCGTTTGAGCTAAGTCTTAATTGCTCGGACTCCGTAGTTCGGTATACATACGAGCCTATTAACGCCGCAACTGGCAGTCATCTGGATCCGTTTAACACTTTCGCTATCTGGGAGGCCCTGAAAAAGCATATTGAGTCCCAGCCAGGCATAGACCTTGAATGGTTTTCTTACTTTAAACAAGAGCTTACACTTGACGCAAACGAGTCCACGTACCTGCACTCGCAAAACTTGGTTAAGGAACAGATCAAAACTCAAAACAAGCTCGCTTTGGACCTTAAAGGTGACAAGTTCGTACTGAAGACCTACATCTACCCCGAATTGAAGTCCGTCGCAACTGGTAAATCGGTCCAGGAGCTCGTGTTTGGCTCCGTCCGCAAGCTAGCGCAGAAGCACAAGAGTATCCGTCCTGCCTTTGAAATGCTAGAAGACTATGTCCAGTCTCGCAATAAATTCTCTACCACGGATGACAGTCACAATACTCTATTATCTTCACGCCTTCTCTCTTGCGACCTGATAAGTCCTACCAAGTCTCGTGTCAAGATCTACCTCCTGGAACGAATGGTCTCGTTGCTAGCGATGGAAGATCTTTGGACGCTTGGCGGCCGTCGAGAAGATCAGTCCACTATTGAGGGATTGGAGATGATCCGAGAACTTTGGGGTCTCCTCAACATGTCTCCTGGTTTGCGCGCCTACCCTGAGCCTTACTTGCCCCTCGGCGCCATTCCCAATGAGCAACTTCCGTCCATGGCCAATTACACCTTACACCATAATGATCCCATACCAGAACCGCAAGTGTACTTTACTGTGTTCGGCATGAATGATATGGAGGTGACTAATGCACTCACGACATTCTTCATGAGGCATGAATGGAGCGATATGGCAAGTAAATACAAAGCCTGCCTCAGGGAATCTTTGTAAGTGATATCCCAGCTCTCACATTGCATGACAAGAGTTACTAACATA--AAAATCGCTTGGCAGCCCGCATCATAATTACGAAGCCCTGAATTATATCCACTCGTACATTTCCTTCTCCTACCGAAAGAACAAGCCATATTTAAGTGTGTATCTCCACTCCTTTGAAACTGGTAAATGGCCAGTGTGT Festuca_arundinacea_Taxonomic_Group_5_NEA18 ATGGTAATGGCAAAGACACTCCACCAGGAAGTTTATCATACCCTTAGCGAAACATTCGACTTTGCCAACAATGACCAGAGGCTATGGTGGCACAGCACGGCGCCAATGTTCGAAAAGATGCTCCAAACTGCTAACTATAGCATTGATGCCCAGTATCGACATCTGGGCATTTATAAGAGCCATGTCATTCCTTTTCTTGGTGTCTATCCTACAAGAAGTGGCGAGCGGTGGCTAAGCATTCTTACGAGATACGGAACCCCGTTTGAGCTAAGTCTTAATTGCTCGGACTCCGTAGTTCGGTATACATACGAGCCTATTAACGCCGCAACTGGCAGTCATCTGGATCCGTTTAACACTTTCGCTATCTGGGAGGCCCTGAAAAAGCATATTGAGTCCCAGCCAGGCATAGACCTTGAATGGTTTTCTTACTTTAAACAAGAGCTTACACTTGACGCAAACGAGTCCACGTACCTGCACTCGCAAAACTTGGTTAAGGAACAGATCAAAACTCAAAACAAGCTCGCTTTGGACCTTAAAGGTGACAAGTTCGTACTGAAGACCTACATCTACCCCGAATTGAAGTCCGTCGCAACTGGTAAATCGGTCCAGGAGCTCGTGTTTGGCTCCGTCCGCAAGCTAGCGCAGAAGCACAAGAGTATCCGTCCTGCCTTTGAAATGCTAGAAGACTATGTCCAGTCTCGCAATAAATTCTCTACCACGGATGACAGTCACAATACTCTATTATCTTCACGCCTTCTCTCTTGCGACCTGATAAGTCCTACCAAGTCTCGTGTCAAGATCTACCTCCTGGAACGAATGGTCTCGTTGCTAGCGATGGAAGATCTTTGGACGCTTGGCGGCCGTCGAGAAGATCAGTCCACTATTGAGGGATTGGAGATGATCCGAGAACTTTGGGGTCTCCTCAACATGTCTCCTGGTTTGCGCGCCTACCCTGAGCCTTACTTGCCCCTCGGCGCCATTCCCAATGAGCAACTTCCGTCCATGGCCAATTACACCTTACACCATAATGATCCCATACCAGAACCGCAAGTGTACTTTACTGTGTTCGGCATGAATGATATGGAGGTGACTAATGCACTCACGACATTCTTCATGAGGCATGAATGGAGCGATATGGCAAGTAAATACAAAGCCTGCCTCAGGGAATCTTTGTAAGTGATATCCCAGCTCTCACATTGCATGACAAGAGTTACTAACATA--AAAATCGCTTGGCAGCCCGCATCATAATTACGAAGCCCTGAATTATATCCACTCGTACATTTCCTTCTCCTACCGAAAGAACAAGCCATATTTAAGTGTGTATCTCCACTCCTTTGAAACTGGTAAATGGCCAGTGTGT Festuca_arundinacea_Taxonomic_Group_4_NEA33 ATTGTAATGGCAAAGACACTCCACCAGGAAGTTTATCATACCCTTAGCGAAACATTTGACTTTGCCAACAATGACCAGAGGCTATGGTGGCACAGCACGGCGCCAATGTTCGAAAAGATGCTCCAAACTGCTAACTATAGCATTGATGCTCAGTATCGACATCTGGGCATTTATAAGAGCCATGTCATTCCTTTTCTTGGTGTCTATCCTACAAGAAGTGGCGAGCGGTGGCTAAGCATTCTTACGAGATACGGAACCCCGTTTGAGCTAAGTCTTAATTGCTCGGACTCCGTAGTTCGGTATACATACGAGCCTATTAACGCCGCAACTGGCAGTCATCTGGATCCGTTTAACACTTTCGCTATCTGGGAGGCCCTGAAAAAGCATATTGAGTCCCAGCCAGGCATAGACCTTGAATGGTTTTCTTACTTTAAACAAGAGCTTACACTTGACGCAAACGAGTCCACGTACCTGCACTCGCAAAACTTGGTTAAGGAACAGATCAAAACTCAAAACAAGCTCGCTTTGGACCTTAAAGGTGACAAGTTCGTACTGAAGACCTACATCTACCCCGAATTGAAGTCCGTCGCAACTGGTAAATCGGTCCAGGAGCTCGTGTTTGGCTCCGTCCGCAAGCTAGCGCAGAAGCACAAGAGTATCCGTCCTGCCTTTGAAATGCTAGAAGACTATGTCCAGTCTCGCAATAAATTCTCTACCACGGATGACAGTCACAATACTCTATTATCTTCACGCCTTCTCTCTTGCGACCTGATAAGTCCTACCAAGTCTCGTGTCAAGATCTACCTTCTGGAACGAATGGTCTCGTTGCCAGCGATGGAAGATCTTTGGACGCTTGGCGGCCGTCGAGAAGATCAGTCCACTATTGAGGGATTGGAGATGATCCGAGAACTTTGGGGTCTCCTCAACATGTCTCCTGGTTTGCGCGCCTACCCTGAGCCTTACTTGCCCCTCGGCGCCATTCCCAATGAGCAACTTCCGTCCATGGCCAATTACACCTTACACCATAATGATCCCATACCAGAACCGCAAGTGTACTTTACTGTGTTCGGCATGAATGATATGGAGGTGACTAATGCACTCACGACATTCTTCATGAGGCATGAATGGAGCGATATGGCAAGTAAATACAAAGCCTGCCTCAGGGAATCTTTGTAAGTGATATCCCAGCTCTCACATTGCATGACAAGAGTTACTAACATA--AAAATCGCTTGGCAGCCCGCATCATGATTACGAAGCCCTGAATTATATCCACTCGTACATTTCCTTCTCCTACCGAAAGAACAAGCCATATTTAAGTGTGTATCTCCACTCCTTTGAAACTGGTAAATGGCCAGTGTGT Festuca_arundinacea_Taxonomic_Group_2_NEA17_GC1 ATGGTAATGGCAAAGACACTCCACCAGGAAGTTTATCATACCCTTAGCGAAACATTCGACTTTGCCAACAATGACCAGAGGCTATGGTGGCACAGCACGGCGCCAATGTTCGAAAAGATGCTCCAAACTGCTAACTATAGCATTGATGCCCAGTATCGACATCTGGGCATTTATAAGAGCCATGTCATTCCTTTTCTTGGTGTCTATCCTACAAGAAGTGGCGAGCGGTGGCTAAGCATTCTTACGAGATACGGAACCCCGTTTGAGCTAAGTCTTAATTGCTCGGACTCCGTAGTTCGGTATACATACGAGCCTATTAACGCCGCAACTGGCAGTCATCTGGATCCGTTTAACACTTTCGCTATCTGGGAGGCCCTGAAAAAGCATATTGAGTCCCAGCCAGGCATAGACCTTGAATGGTTTTCTTACTTTAAACAAGAGCTTACACTTGACGCAAACGAGTCCACGTACCTGCACTCGCAAAACTTGGTTAAGGAACAGATCAAAACTCAAAACAAGCTCGCTTTGGACCTTAAAGGTGACAAGTTCGTACTGAAGACCTACATCTACCCCGAATTGAAGTCCGTCGCAACTGGTAAATCGGTCCAGGAGCTCGTGTTTGGCTCCGTCCGCAAGCTAGCGCAGAAGCACAAGAGTATCCGTCCTGCCTTTGAAATGCTAGAAGACTATGTCCAATCTCGCAATAAATTCTCTACCACGGATGACAGTCACAATACTCTATTATCTTCACGCCTTCTCTCTTGCGACCTGATAAGTCCTACCAAGTCTCGTGTCAAGATCTACCTCCTGGAACGAATGGTCTCGTTGCTAGCGATGGAAGATCTTTGGACGCTTGGCGGCCGTCGAGAAGATCAGTCCACTATTGAGGGATTGGAGATGATCCGAGAACTTTGGGGTCTCCTCAACATGTCTCCTGGTTTGCGCGCCTACCCTGAGCCTTACTTGCCCCTCGGCGCCATTCCCAATGAGCAACTTCCGTCCATGGCCAATTACACCTTACACCATAATGATCCCATACCAGAACCGCAAGTGTACTTTACTGTGTTCGGCATGAATGATATGGAGGTGACTAATGCACTCACGACATTCTTCATGAGGCATGAATGGAGCGATATGGCAAGTAAATACAAAGCCTGCCTCAGGGAATCTTTGTAAGTGATATCCCAGCTCTCACATTGCATGACAAGAGTTACTAACATA--AAAATCGCTTGGCAGCCCGCATCATAATTACGAAGCCCTGAATTATATCCACTCGTACATTTCCTTCTCCTACCGAAAGAACAAGCCATATTTAAGTGTGTATCTCCACTCCTTTGAAACTGGTAAATGGCCAGTGTGT Festuca_arundinacea_Taxonomic_Group_2_NEA17_GC2 ATGGTATTGGCAAAGACACTCCACCAGGAAGTTTATCAAACCCTCAGCGAAACATTTGACTTTGCCAACAATGACCAGAGGCTATGGTGGCACAGCACGGCGCCAATGTTCCAAAAGATACTCCAAACTGCTAACTATAGCATTTATGCTCAGTATCAACATCTGAGCATTTATAAAAGCCATATCATTCCTTTTCTTGGTGTCTATCCGACAAGAAGTGGCGAGCGGTGGCTAAGCATTCTTACGAGATACGGAACCCCGTTTGAGCTAAGTCTTAATTGCTCTGACTCCATAGTTCGGTATGCATACGAGCCTATTAACGCCGCAACTGGCAGCCATCTGGATCCGTTCAACACTTTCGCTATCTGGGAGGCTCTAAAAAAGCTTATAGATTCCCAGCCAGGCATAGACCTTCAATGGTTTTCCTACTTTAAACAAGAGCTTACACTTGACGCAAACGAGTCCACGTACCTGCACTCTCAAAACTTGGTCAAGGAACAGATCAAAACTCAAAACAAGCTAGCGTTAGACCTTAAAGGTGACAAGTTCGTACTCAAGACCTACATCTACCCCGAATTGAAGTCCGTCGCAACTGGTAAATCGGTCCAGGAGCTTGTGTTTGGCTCCGTCCGCAAGCTAGCGCAGAAGCATAAGAGTATCCGTCCTGCCTTTGAAATGCTAGAAGACTATGTCCAGTCTCGCAATAAAGTCCCTACCACGGATGACAGTCACAATACTCCATTATCTTCACGCCTTCTCTCTTGCGACCTGGTGAGTCCTACCAAGTCTCGTGTCAAGATCTACCTCCTGGAACGAATGGTCTCGTTGCTAGCGATGGAAGATCTTTGGACGCTTGGCGGCCGTCGAGAAGATCAGTCCACTATTGAGGGATTGGAGATGATCCGAGAACTTTGGGGTCTCCTCAACATGTCTCCTGGTTTGCGCGCCTACCCTGAGCCTTACTTGCCCCTCGGCGCCATTCCCAATGAGCAACTTCCGTCCATGGCCAATTACACCTTACACCATAATGATCCCATACCAGAACCGCAAGTGTACTTTACTGTGTTCGGCATGAATGATATGGAGGTGACTAATGCACTCACGACATTCTTCATGAGGCATGAATGGAGCGATATGGCAAGTAAATACAAAGCCTGCCTTAGGGAATCTTTGTAGGTGATATCCTAGTTCTCACATTGCATGACAAGAATTACTAACAT--AAAAATCGCTTGGCAGCCCGCATCATAATTACGAAGCCCTAAATTATATCCACTCGTACATTTCCTTCTCCTACCGAAATAACAAGCCATATTTAAGTGTGTATCTCCACTCATTTGAAACTGGTGAATGGCCTGTGTGT Festuca_arundinacea_Taxonomic_Group_2_NEA32_GC1 ATGGTAATGGCAAAGACACTCCACCAGGAAGTTTATCATACCCTTAGCGAAACATTCGACTTTGCCAACAATGACCAGAGGCTATGGTGGCACAGCACGGCGCCAATGTTCGAAAAGATGCTCCAAACTGCTAACTATAGCATTGATGCCCAGTATCGACATCTGGGCATTTATAAGAGCCATGTCATTCCTTTTCTTGGTGTCTATCCTACAAGAAGTGGCGAGCGGTGGCTAAGCATTCTTACGAGATACGGAACCCCGTTTGAGCTAAGTCTTAATTGCTCGGACTCCGTAGTTCGGTATACATACGAGCCTATTAACGCCGCAACTGGCAGTCATCTGGATCCGTTTAACACTTTCGCTATCTGGGAGGCCCTGAAAAAGCATATTGAGTCCCAGCCAGGCATAGACCTTGAATGGTTTTCTTACTTTAAACAAGAGCTTACACTTGACGCAAACGAGTCCACGTACCTGCACTCGCAAAACTTGGTTAAGGAACAGATCAAAACTCAAAACAAGCTCGCTTTGGACCTTAAAGGTGACAAGTTCGTACTGAAGACCTACATCTACCCCGAATTGAAGTCCGTCGCAACTGGTAAATCGGTCCAGGAGCTCGTGTTTGGCTCCGTCCGCAAGCTAGCGCAGAAGCACAAGAGTATCCGTCCTGCCTTTGAAATGCTAGAAGACTATGTCCAGTCTCGCAATAAATTCTCTACCACGGATGACAGTCACAATACTCTATTATCTTCACGCCTTCTCTCTTGCGACCTGATAAGTCCTACCAAGTCTCGTGTCAAGATCTACCTCCTGGAACGAATGGTCTCGTTGCTAGCGATGGAAGATCTTTGGACGCTTGGCGGCCGTCGAGAAGATCAGTCCACTATTGAGGGATTGGAGATGATCCGAGAACTTTGGGGTCTCCTCAACATGTCTCCTGGTTTGCGCGCCTACCCTGAGCCTTACTTGCCCCTCGGCGCCATTCCCAATGAGCAACTTCCGTCCATGGCCAATTACACCTTACACCATAATGATCCGATACCAGAACCGCAAGTGTACTTTACTGTGTTCGGCATGAATGATATGGAGGTGACTAATGCACTCACGACATTCTTCATGAGGCATGAATGGAGCGATATGGCAAGTAAATACAAAGCCTGCCTCAGGGAATCTTTGTAAGTGATATCCCAGCTCTCACATTGCATGACAAGAGTTACTAACATA--AAAATCGCTTGGCAGCCCGCATCATAATTACGAAGCCCTGAATTATATCCACTCGTACATTTCCTTCTCCTACCGAAAGAACAAGCCATATTTAAGTGTGTATCTCCACTCCTTTGAAACTGGTAAATGGCCAGTGTGT Festuca_arundinacea_Taxonomic_Group_2_NEA32_GC2 ATGGTATTGGCAAAGACACTCCACCAGGAAGTTTATCAAACCCTCAGCGAAACATTTGACTTTGCCAACAATGACCAGAGGCTATGGTGGCACAGCACGGCGCCAATGTTCCAAAAGATACTCCAAACTGCTAACTATAGCATTTATGCTCAGTATCAACATCTGAGCATTTATAAAAGCCATATCATTCCTTTTCTTGGTGTCTATCCGACAAGAAGTGGCGAGCGGTGGCTAAGCATTCTTACGAGATACGGAACCCCGTTTGAGCTAAGTCTTAATTGCTCTGACTCCATAGTTCGGTATACATACGAGCCTATTAACGCCGCAACTGGCAGCCATCTGGATCCGTTCAACACTTTCGCTATCTGGGAGGCTCTAAAAAAGCTTATAGATTCCCAGCCAGGCATAGACCTTCAATGGTTTTCCTACTTTAAACAAGAGCTTACACTTGACGCAAACGAGTCCACGTACCTGCACTCTCAAAACTTGGTCAAGGAACAGATCAAAACTCAAAACAAGCTAGCGTTAGACCTTAAAGGTGACAAGTTCGTACTCAAGACCTACATCTACCCCGAATTGAAGTCCGTCGCAACTGGTAAATCGGTCCAGGAGCTTGTGTTTGGCTCCGTCCGCAAGCTAGCGCAGAAGCATAAGAGTATCCGTCCTGCCTTTGAAATGCTAGAAGACTATGTCCAGTCTCGCAATAAAGTCCCTACCACGGATGACAGTCACAATACTCCATTATCTTCACGCCTTCTCTCTTGCGACCTGGTGAGTCCTACCAAGTCTCGTGTCAAGATCTACCTCCTGGAACGAATGGTCTCGTTGCTAGCGATGGAAGATCTTTGGACGCTTGGCGGCCGTCGAGAAGATCAGTCCACTATTGAGGGATTGGAGATGATCCGAGAACTTTGGGGTCTCCTTAACATGTCTCCTGGTTTGCGCGCCTACCCTGAGCCTTACTTGCCCCTCGGCGCCATTCCCAATGAGCAACTTCCGTCCATGGCCAATTACACCTTACACCATAATGATCCGATACCAGAACCGCAAGTGTACTTTACTGTGTTCGGCATGAATGATATGGAGGTGACTAATGCACTCACGAAATTCTTCATGAGGCATGAATGGAGCGATATGGCAAGTAAATACAAAGCCTGCCTTAGGGAATCTTTGTAGGTGATATCCTAGTTCTCACATTGCATGACAAGAATTACTAACAT--AAAAATCGCTTGGCAGCCCGCATCATAATTACGAAGCCCTAAATTATATCCACTCGTACATTTCCTTCTCCTACCGAAATAACAAGCCATATTTAAGTGTGTATCTCCACTCATTTGAAACTGGTGAATGGCCTGTGTGT Epichloe_coenophiala_NEA22_GC1 ATGGTAATGGCAAAGACACTCCACCAGGAAGTTTATCATACCCTTAGCGAAACATTTGACTTTGCCAACAATGACCAGAGGCTATGGTGGCACAGCACGGCGCCAATGTTCGAAAAGATGCTCCAAACTGCTAACTATAGCATTGATGCTCAGTATCGACATCTGGGCATTTATAAGAGCCATGTCATTCCTTTTCTTGGTGTCTATCCTACAAGAAGTGGCGAGCGGTGGCTAAGCATTCTTACGAGATACGGAACCCCGTTTGAGCTAAGTCTTAATTGCTCGGACTCCGTAGTTCGGTATACATACGAGCCTATTAACGCCGCAACTGGCAGTCATCTGGATCCGTTTAACACTTTCGCTATCTGGGAGGCCCTGAAAAAGCATATTGAGTCCCAGCCAGGCATAGACCTTGAATGGTTTTCTTACTTTAAACAAGAGCTTACACTTGACGCAAACGAGTCCACGTACCTGCACTCGCAAAACTTGGTTAAGGAACAGATCAAAACTCAAAACAAGCTCGCTTTGGACCTTAAAGGTGACAAGTTCGTACTGAAGACCTACATCTACCCCGAATTGAAGTCCGTCGCAACTGGTAAATCGGTCCAGGAGCTCGTGTTTGGCTCCGTCCGCAAGCTAGCGCAGAAGCACAAGAGTATCCGTCCTGCCTTTGAAATGCTAGAAGACTATGTCCAGTCTCGCAATAAATTCTCTACCACGGATGACAGTCACAATACTCTATTATCTTCACGCCTTCTCTCTTGCGACCTGATAAGTCCTACCAAGTCTCGTGTCAAGATCTACCTCCTGGAACGAATGGTCTCGTTGCCAGCGATGGAAGATCTTTGGACGCTTGGCGGCCGTCGAGAAGATCAGTCCACTATTGAGGGATTGGAGATGATCCGAGAACTTTGGGGTCTCCTCAACATGTCTCCTGGTTTGCGCGCCTACCCTGAGCCTTACTTGCCCCTCGGCGCCATTCCCAATGAGCAACTTCCGTCCATGGCCAATTACACCTTACACCATAATGATCCCATACCAGAACCGCAAGTGTACTTTACTGTGTTCGGCATGAATGATATGGAGGTGACTAATGCACTCACGACATTCTTCATGAGGCATGAATGGAGCGATATGGCAAGTAAATACAAAGCCTGCCTCAGGGAATCTTTGTAAGTGATATCCCAGCTCTCACATTGCATGACAAGAGTTACTAACATA--AAAATCGCTTGGCAGCCCGCATCATGATTACGAAGCCCTGAATTATATCCACTCGTACATTTCCTTCTCCTACCGAAAGAACAAGCCATATTTAAGTGTGTATCTCCACTCCTTTGAAACTGGTAAATGGCCAGTGTGT Epichloe_coenophiala_NEA22_GC2 ATGGTATTGGCAAAGACACTCCACCAGGAAGTTTATCAAACCCTCAGCGAAACATTTGACTTTGCCAACAATGACCAGAGGCTATGGTGGCACAGCACGGCGCCAATGTTCCAAAAGATACTCCAAACTGCTAACTATAGCATTTATGCTCAGTATCAACATCTGAGCATTTATAAAAGCCATATCATTCCTTTTCTTGGTGTCTATCCTACAAGAAGTGGCGAGCGGTGGCTAAGCATTCTTACGAGATACGGAACCCCGTTTGAGCTAAGTCTTAATTGCTCTGACTCCATAGTTCGGTATACATACGAGCCTATTAACGCCGCAACTGGCAGCCATCTGGATCCGTTCAACACTTTCGCTATCTGGGAGGCTCTAAAAAAGCTTATAGATTCCCAGCCAGGCATAGACCTTCAATGGTTTTCCTACTTTAAACAAGAGCTTACACTTGACGCAAACGAGTCCACGTACCTGCACTCTCAAAACTTGGTCAAGGAACAGATCAAAACTCAAAACAAGCTAGCGTTAGACCTTAAAGGTGACAAGTTCGTACTCAAGACCTACATCTACCCCGAATTGAAGTCCGTCGCAACTGGTAAATCGGTCCAGGAGCTTGTGTTTGGCTCCGTCCGCAAGCTAGCGCAGAAGCACAAGAGTATCCGTCCTGCCTTTGAAATGCTAGAAGACTATGTCCAGTCTCGCAATAAAGTCCCTACCACGGATGACAGTCACAATACTCCATTATCTTCACGCCTTCTCTCTTGCGACCTGGTGAGTCCTACCAAGTCTCGTGTCAAGATCTACCTCCTGGAACGAATGGTCTCGTTGCCAGCGATGGAAGATCTTTGGACGCTTGGCGGCCGTCGAGAAGATCAGTCCACTATTGAGGGATTGGAGATGATCCGAGAACTTTGGGGTCTCCTTAACATGTCTCCTGGTTTGCGCGCCTACCCTGAGCCTTACTTGCCCCTCGGCGCCATTCCCAATGAGCAACTTCCGTCCATGGCCAATTACACCTTACACCATAATGATCCCATACCAGAACCGCAAGTGTACTTTACTGTGTTCGGCATGAATGATATGGAGGTGACTAATGCACTCACGAAATTCTTCATGAGGCATGAATGGAGCGATATGGCAAGTAAATACAAAGCCTGCCTTAGGGAATCTTTGTAGGTGATATCCTAGTTCTCACATTGCATGACAAGAATTACTAACATATAAAAATCGCTTGGCAGCCCGCATCATAATTACGAAGCCCTAAATTATATCCACTCGTACATTTCCTTCTCCTACCGAAATAACAAGCCATATTTAAGTGTGTATCTCCACTCATTTGAAACTGGTGAATGGCCTGTGTGT Epichloe_coenophiala_NEA20_GC1 ATGGTAATGGCAAAGACACTCCACCAGGAAGTTTATCATACCCTTAGCGAAACATTTGACTTTGCCAACAATGACCAGAGGCTATGGTGGCACAGCACGGCGCCAATGTTCGAAAAGATGCTCCAAACTGCTAACTATAGCATTGATGCTCAGTATCGACATCTGGGCATTTATAAGAGCCATGTCATTCCTTTTCTTGGTGTCTATCCTACAAGAAGTGGCGAGCGGTGGCTAAGCATTCTTACGAGATACGGAACCCCGTTTGAGCTAAGTCTTAATTGCTCGGACTCCGTAGTTCGGTATACATACGAGCCTATTAACGCCGCAACTGGCAGTCATCTGGATCCGTTTAACACTTTCGCTATCTGGGAGGCCCTGAAAAAGCATATTGAGTCCCAGCCAGGCATAGACCTTGAATGGTTTTCTTACTTTAAACAAGAGCTTACACTTGACGCAAACGAGTCCACGTACCTGCACTCGCAAAACTTGGTTAAGGAACAGATCAAAACTCAAAACAAGCTCGCTTTGGACCTTAAAGGTGACAAGTTCGTACTGAAGACCTACATCTACCCCGAATTGAAGTCCGTCGCAACTGGTAAATCGGTCCAGGAGCTCGTGTTTGGCTCCGTCCGCAAGCTAGCGCAGAAGCACAAGAGTATCCGTCCTGCCTTTGAAATGCTAGAAGACTATGTCCAGTCTCGCAATAAATTCTCTACCACGGATGACAGTCACAATACTCTATTATCTTCACGCCTTCTCTCTTGCGACCTGATAAGTCCTACCAAGTCTCGTGTCAAGATCTACCTCCTGGAACGAATGGTCTCGTTGCCAGCGATGGAAGATCTTTGGACGCTTGGCGGCCGTCGAGAAGATCAGTCCACTATTGAGGGATTGGAGATGATCCGAGAACTTTGGGGTCTCCTCAACATGTCTCCTGGTTTGCGCGCCTACCCTGAGCCTTACTTGCCCCTCGGCGCCATTCCCAATGAGCAACTTCCGTCCATGGCCAATTACACCTTACACCATAATGATCCCATACCAGAACCGCAAGTGTACTTTACTGTGTTCGGCATGAATGATATGGAGGTGACTAATGCACTCACGACATTCTTCATGAGGCATGAATGGAGCGATATGGCAAGTAAATACAAAGCCTGCCTCAGGGAATCTTTGTAAGTGATATTCCAGCTCTCACATTGCATGACAAGAGTTACTAACATA--AAAATCGCTTGGCAGCCCGCATCATGATTACGAAGCCCTGAATTATATCCACTCGTACATTTCCTTCTCCTACCGAAAGAACAAGCCATATTTAAGTGTGTATCTCCACTCCTTTGAAACTGGTAAATGGCCAGTGTGT Epichloe_coenophiala_NEA20_GC2 ATGGTATTGGCAAAGACACTCCACCAGGAAGTTTATCAAACCCTCAGCGAAACATTTGACTTTGCCAACAATGACCAGAGGCTATGGTGGCACAGCACGGCGCCAATGTTCCAAAAGATACTCCAAACTGCTAACTATAGCATTTATGCTCAGTATCAACATCTGAGCATTTATAAAAGCCATATCATTCCTTTTCTTGGTGTCTATCCTACAAGAAGTGGCGAGCGGTGGCTAAGCATTCTTACGAGATACGGAACCCCGTTTGAGCTAAGTCTTAATTGCTCTGACTCCATAGTTCGGTATACATACGAGCCTATTAACGCCGCAACTGGCAGCCATCTGGATCCGTTCAACACTTTCGCTATCTGGGAGGCTCTAAAAAAGCTTATAGATTCCCAGCCAGGCATAGACCTTCAATGGTTTTCCTACTTTAAACAAGAGCTTACACTTGACGCAAACGAGTCCACGTACCTGCACTCTCAAAACTTGGTCAAGGAACAGATCAAAACTCAAAACAAGCTAGCGTTAGACCTTAAAGGTGACAAGTTCGTACTCAAGACCTACATCTACCCCGAATTGAAGTCCGTCGCAACTGGTAAATCGGTCCAGGAGCTTGTGTTTGGCTCCGTCCGCAAGTTAGCGCAGAAGCATAAGAGTATCCGTCCTGCCTTTGAAATGCTAGAAGACTATGTCCAGTCTCGCAATAAAGTCCCTACCACGGATGACAGTCACAATACTCCATTATCTTCACGCCTTCTCTCTTGCGACCTGGTGAGTCCTACCAAGTCTCGTGTCAAGATCTACCTCCTGGAACGAATGGTCTCGTTGCCAGCGATGGAAGATCTTTGGACGCTTGGCGGCCGTCGAGAAGATCAGTCCACTATTGAGGGATTGGAGATGATCCGAGAACTTTGGGGTCTCCTTAACATGTCTCCTGGTTTGCGCGCCTACCCTGAGCCTTACTTGCCCCTCGGCGCCATTCCCAATGAGCAACTTCCGTCCATGGCCAATTACACCTTACACCATAATGATCCGATACCAGAACCGCAAGTGTACTTTACTGTGTTCGGCATGAATGATATGGAGGTGACTAATGCACTCACGAAATTCTTCATGAGGCATGAATGGAGCGATATGGCAAGTAAATACAAAGCCTGCCTTAGGGAATCTTTGTAGGTGATATCCTAGTTCTCACATTGCATGACAAGAATTACTAACATATAAAAATCGCTTGGCAGCCCGCATCATAATTACGAAGCCCTAAATTATATCCACTCGTACATTTCCTTCTCCTACCGAAATAACAAGCCATATTTAAGTGTGTATCTCCACTCATTTGAAACTGGTGAATGGCCTGTGTGT Epichloe_coenophiala_NEA16_GC1 ATGGTAATGGCAAAGACACTCCACCAGGAAGTTTATCATACCCTTAGCGAAACATTTGACTTTGCCAACAATGACCAGAGGCTATGGTGGCACAGCACGGCGCCAATGTTCGAAAAGATGCTCCAAACTGCTAACTATAGCATTGATGCTCAGTATCGACATCTGGGCATTTATAAGAGCCATGTCATTCCTTTTCTTGGTGTCTATCCTACAAGAAGTGGCGAGCGGTGGCTAAGCATTCTTACGAGATACGGAACCCCGTTTGAGCTAAGTCTTAATTGCTCGGACTCCGTAGTTCGGTATACATACGAGCCTATTAACGCCGCAACTGGCAGTCATCTGGATCCGTTTAACACTTTCGCTATCTGGGAGGCCCTGAAAAAGCATATTGAGTCCCAGCCAGGCATAGACCTTGAATGGTTTTCTTACTTTAAACAAGAGCTTACACTTGACGCAAACGAGTCCACGTACCTGCACTCGCAAAACTTGGTTAAGGAACAGATCAAAACTCAAAACAAGCTCGCTTTGGACCTTAAAGGTGACAAGTTCGTACTGAAGACCTACATCTACCCCGAATTGAAGTCCGTCGCAACTGGTAAATCGGTCCAGGAGCTCGTGTTTGGCTCCGTCCGCAAGCTAGCGCAGAAGCACAAGAGTATCCGTCCTGCCTTTGAAATGCTAGAAGACTATGTCCAGTCTCGCAATAAATTCTCTACCACGGATGACAGTCACAATACTCTATTATCTTCACGCCTTCTCTCTTGCGACCTGATAAGTCCTACCAAGTCTCGTGTCAAGATCTACCTCCTGGAACGAATGGTCTCGTTGCCAGCGATGGAAGATCTTTGGACGCTTGGCGGCCGTCGAGAAGATCAGTCCACTATTGAGGGATTGGAGATGATCCGAGAACTTTGGGGTCTCCTCAACATGTCTCCTGGTTTGCGCGCCTACCCTGAGCCTTACTTGCCCCTCGGCGCCATTCCCAATGAGCAACTTCCGTCCATGGCCAATTACACCTTACACCATAATGATCCCATACCAGAACCGCAAGTGTACTTTACTGTGTTCGGCATGAATGATATGGAGGTGACTAATGCACTCACGACATTCTTCATGAGGCATGAATGGAGCGATATGGCAAGTAAATACAAAGCCTGCCTCAGGGAATCTTTGTAAGTGATATTCCAGCTCTCACATTGCATGACAAGAGTTACTAACATA--AAAATCGCTTGGCAGCCCGCATCATGATTACGAAGCCCTGAATTATATCCACTCGTACATTTCCTTCTCCTACCGAAAGAACAAGCCATATTTAAGTGTGTATCTCCACTCCTTTGAAACTGGTAAATGGCCAGTGTGT Epichloe_coenophiala_NEA16_GC2 ATGGTATTGGCAAAGACACTCCACCAGGAAGTTTATCAAACCCTCAGCGAAACATTTGACTTTGCCAACAATGACCAGAGGCTATGGTGGCACAGCACGGCGCCAATGTTCCAAAAGATACTCCAAACTGCTAACTATAGCATTTATGCTCAGTATCAACATCTGAGCATTTATAAAAGCCATATCATTCCTTTTCTTGGTGTCTATCCTACAAGAAGTGGCGAGCGGTGGCTAAGCATTCTTACGAGATACGGAACCCCGTTTGAGCTAAGTCTTAATTGCTCTGACTCCATAGTTCGGTATACATACGAGCCTATTAACGCCGCAACTGGCAGCCATCTGGATCCGTTCAACACTTTCGCTATCTGGGAGGCTCTAAAAAAGCTTATAGATTCCCAGCCAGGCATAGACCTTCAATGGTTTTCCTACTTTAAACAAGAGCTTACACTTGACGCAAACGAGTCCACGTACCTGCACTCTCAAAACTTGGTCAAGGAACAGATCAAAACTCAAAACAAGCTAGCGTTAGACCTTAAAGGTGACAAGTTCGTACTCAAGACCTACATCTACCCCGAATTGAAGTCCGTCGCAACTGGTAAATCGGTCCAGGAGCTTGTGTTTGGCTCCGTCCGCAAGTTAGCGCAGAAGCATAAGAGTATCCGTCCTGCCTTTGAAATGCTAGAAGACTATGTCCAGTCTCGCAATAAAGTCCCTACCACGGATGACAGTCACAATACTCCATTATCTTCACGCCTTCTCTCTTGCGACCTGGTGAGTCCTACCAAGTCTCGTGTCAAGATCTACCTCCTGGAACGAATGGTCTCGTTGCCAGCGATGGAAGATCTTTGGACGCTTGGCGGCCGTCGAGAAGATCAGTCCACTATTGAGGGATTGGAGATGATCCGAGAACTTTGGGGTCTCCTCAACATGTCTCCTGGTTTGCGCGCCTACCCTGAGCCTTACTTGCCCCTCGGCGCCATTCCCAATGAGCAACTTCCGTCCATGGCCAATTACACCTTACACCATAATGATCCCATACCAGAACCGCAAGTGTACTTTACTGTGTTCGGCATGAATGATATGGAGGTGACTAATGCACTCACGACATTCTTCATGAGGCATGAATGGAGCGATATGGCAAGTAAATACAAAGCCTGCCTTAGGGAATCTTTGTAGGTGATATCCTAGTTCTCACATTGCATGACAAGAATTACTAACATATAAAAATCGCTTGGCAGCCCGCATCATAATTACGAAGCCCTAAATTATATCCACTCGTACATTTCCTTCTCCTACCGAAATAACAAGCCATATTTAAGTGTGTATCTCCACTCATTTGAAACTGGTGAATGGCCTGTGTGT Epichloe_coenophiala_NEA14_GC1 ATGGTAATGGCAAAGACACTCCACCAGGAAGTTTATCATACCCTTAGCGAAACATTTGACTTTGCCAACAATGACCAGAGGCTATGGTGGCACAGCACGGCGCCAATGTTCGAAAAGATGCTCCAAACTGCTAACTATAGCATTGATGCTCAGTATCGACATCTGGGCATTTATAAGAGCCATGTCATTCCTTTTCTTGGTGTCTATCCTACAAGAAGTGGCGAGCGGTGGCTAAGCATTCTTACGAGATACGGAACCCCGTTTGAGCTAAGTCTTAATTGCTCGGACTCCGTAGTTCGGTATACATACGAGCCTATTAACGCCGCAACTGGCAGTCATCTGGATCCGTTTAACACTTTCGCTATCTGGGAGGCCCTGAAAAAGCATATTGAGTCCCAGCCAGGCATAGACCTTGAATGGTTTTCTTACTTTAAACAAGAGCTTACACTTGACGCAAACGAGTCCACGTACCTGCACTCGCAAAACTTGGTTAAGGAACAGATCAAAACTCAAAACAAGCTCGCTTTGGACCTTAAAGGTGACAAGTTCGTACTGAAGACCTACATCTACCCCGAATTGAAGTCCGTCGCAACTGGTAAATCGGTCCAGGAGCTTGTGTTTGGCTCCGTCCGCAAGCTAGCGCAGAAGCATAAGAGTATCCGTCCTGCCTTTGAAATGCTAGAAGACTATGTCCAGTCTCGCAATAAATTCTCTACCACGGATGACAGTCACAATACTCTATTATCTTCACGCCTTCTCTCTTGCGACCTGATAAGTCCTACCAAGTCTCGTGTCAAGATCTACCTCCTGGAACGAATGGTCTCGTTGCCAGCGATGGAAGATCTTTGGACGCTTGGCGGCCGTCGAGAAGATCAGTCCACTATTGAGGGATTGGAGATGATCCGAGAACTTTGGGGTCTCCTTAACATGTCTCCTGGTTTGCGCGCCTACCCTGAGCCTTACTTGCCCCTCGGCGCCATTCCCAATGAGCAACTTCCGTCCATGGCCAATTACACCTTACACCATAATGATCCGATACCAGAACCGCAAGTGTACTTTACTGTGTTCGGCATGAATGATATGGAGGTGACTAATGCACTCACGAAATTCTTCATGAGGCATGAATGGAGCGATATGGCAAGTAAA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Epichloe_coenophiala_NEA14_GC2 ---------------------------------------------AGCGAAACATTTGACTTTGCCAACAATGACCAGAGGCTATGGTGGCACAGCACGGCGCCAATGTTCCAAAAGATACTCCAAACTGCTAACTATAGCATTTATGCTCAGTATCAACATCTGAGCATTTATAAAAGCCATATCATTCCTTTTCTTGGTGTCTATCCTACAAGAAGTGGCGAGCGGTGGCTAAGCATTCTTACGAGATACGGAACCCCGTTTGAGCTAAGTCTTAATTGCTCTGACTCCATAGTTCGGTATACATACGAGCCTATTAACGCCGCAACTGGCAGCCATCTGGATCCGTTCAACACTTTCGCTATCTGGGAGGCTCTAAAAAAGCTTATAGATTCCCAGCCAGGCATAGACCTTCAATGGTTTTCCTACTTTAAACAAGAGCTTACACTTGACGCAAACGAGTCCACGTACCTGCACTCTCAAAACTTGGTCAAGGAACAGATCAAAACTCAAAACAAGCTAGCGTTAGACCTTAAAGGTGACAAGTTCGTACTCAAGACCTACATCTACCCCGAATTGAAGTCCGTCGCAACTGGTAAATCGGTCCAGGAGCTTGTGTTTGGCTCCGTCCGCAAGCTAGCGCAGAAGCATAAGAGTATCCGTCCTGCCTTTGAAATGCTAGAAGACTATGTCCAGTCTCGCAATAAAGTCCCTACCACGGATGACAGTCACAATACTCCATTATCTTCACGCCTTCTCTCTTGCGACCTGGTGAGTCCTACCAAGTCTCGTGTCAAGATCTACCTCCTGGAACGAATGGTCTCGTTGCCAGCGATGGAAGATCTTTGGACGCTTGGCGGCCGTCGAGAAGATCAGTCCACTATTGAGGGATTGGAGATGATCCGAGAACTTTGGGGTCTCCTTAACATGTCTCCTGGTTTGCGCGCCTACCCTGAGCCTTACTTGCCCCTCGGCGCCATTCCCAATGAGCAACTTCCGTCCATGGCCAATTACACCTTACACCATAATGATCCGATACCAGAACCGCAAGTGTACTTTACTGTGTTCGGCATGAATGATATGGAGGTGACTAATGCACTCACGAAATTCTTCATGAGGCATGAATGGAGCGATATGGCAAGTAAATACAAAGCCTGCCTTAGGGAATCTTTGTAGGTGATATCCTAGTTCTCACATTGCATGACAAGAATTACTAACATATAAAAATCGCTTGGCAGCCCGCATCATAATTACGAAGCCCTAAATTATATCCACTCGTACATTTCCTTCTCCTACCGAAATAACAAGCCATATTTAAGTGTGTATCTCCACTCATTTGAAACTGGTGAATGGCCTGTGTGT Epichloe_coenophiala_E34_GC1 ATGGTAATGGCAAAGACACTCCACCAGGAAGTTTATCATACCCTTAGCGAAACATTTGACTTTGCCAACAATGACCAGAGGCTATGGTGGCACAGCACGGCGCCAATGTTCGAAAAGATGCTCCAAACTGCTAACTATAGCATTGATGCTCAGTATCGACATCTGGGCATTTATAAGAGCCATGTCATTCCTTTTCTTGGTGTCTATCCTACAAGAAGTGGCGAGCGGTGGCTAAGCATTCTTACGAGATACGGAACCCCGTTTGAGCTAAGTCTTAATTGCTCGGACTCCGTAGTTCGGTATACATACGAGCCTATTAACGCCGCAACTGGCAGTCATCTGGATCCGTTTAACACTTTCGCTATCTGGGAGGCCCTGAAAAAGCATATTGAGTCCCAGCCAGGCATAGACCTTGAATGGTTTTCTTACTTTAAACAAGAGCTTACACTTGACGCAAACGAGTCCACGTACCTGCACTCGCAAAACTTGGTTAAGGAACAGATCAAAACTCAAAACAAGCTCGCTTTGGACCTTAAAGGTGACAAGTTCGTACTGAAGACCTACATCTACCCCGAATTGAAGTCCGTCGCAACTGGTAAATCGGTCCAGGAGCTCGTGTTTGGCTCCGTCCGCAAGCTAGCGCAGAAGCACAAGAGTATCCGTCCTGCCTTTGAAATGCTAGAAGACTATGTCCAGTCTCGCAATAAATTCTCTACCACGGATGACAGTCACAATACTCTATTATCTTCACGCCTTCTCTCTTGCGACCTGATAAGTCCTACCAAGTCTCGTGTCAAGATCTACCTCCTGGAACGAATGGTCTCGTTGCCAGCGATGGAAGATCTTTGGACGCTTGGCGGCCGTCGAGAAGATCAGTCCACTATTGAGGGATTGGAGATGATCCGAGAACTTTGGGGTCTCCTCAACATGTCTCCTGGTTTGCGCGCCTACCCTGAGCCTTACTTGCCCCTCGGCGCCATTCCCAATGAGCAACTTCCGTCCATGGCCAATTACACCTTACACCATAATGATCCCATACCAGAACCGCAAGTGTACTTTACTGTGTTCGGCATGAATGATATGGAGGTGACTAATGCACTCACGACATTCTTCATGAGGCATGAATGGAGCGATATGGCAAGTAAATACAAAGCCTGCCTCAGGGAATCTTTGTAAGTGATATCCCAGCTCTCACATTGCATGACAAGAGTTACTAACATA--AAAATCGCTTGGCAGCCCGCATCATGATTACGAAGCCCTGAATTATATCCACTCGTACATTTCCTTCTCCTACCGAAAGAACAAGCCATATTTAAGTGTGTATCTCCACTCCTTTGAAACTGGTAAATGGCCAGTGTGT Epichloe_coenophiala_E34_GC2 ATGGTATTGGCAAAGACACTCCACCAGGAAGTTTATCAAACCCTCAGCGAAACATTTGACTTTGCCAACAATGACCAGAGGCTATGGTGGCACAGCACGGCGCCAATGTTCCAAAAGATACTCCAAACTGCTAACTATAGCATTTATGCTCAGTATCAACATCTGAGCATTTATAAAAGCCATATCATTCCTTTTCTTGGTGTCTATCCTACAAGAAGTGGCGAGCGGTGGCTAAGCATTCTTACGAGATACGGAACCCCGTTTGAGCTAAGTCTTAATTGCTCTGACTCCATAGTTCGGTATACATACGAGCCTATTAACGCCGCAACTGGCAGCCATCTGGATCCGTTCAACACTTTCGCTATCTGGGAGGCTCTAAAAAAGCTTATAGATTCCCAGCCAGGCATAGACCTTCAATGGTTTTCCTACTTTAAACAAGAGCTTACACTTGACGCAAACGAGTCCACGTACCTGCACTCTCAAAACTTGGTCAAGGAACAGATCAAAACTCAAAACAAGCTAGCGTTAGACCTTAAAGGTGACAAGTTCGTACTCAAGACCTACATCTACCCCGAATTGAAGTCCGTCGCAACTGGTAAATCGGTCCAGGAGCTTGTGTTTGGCTCCGTCCGCAAGCTAGCGCAGAAGCATAAGAGTATCCGTCCTGCCTTTGAAATGCTAGAAGACTATGTCCAGTCTCGCAATAAAGTCCCTACCACGGATGACAGTCACAATACTCCATTATCTTCACGCCTTCTCTCTTGCGACCTGGTGAGTCCTACCAAGTCTCGTGTCAAGATCTACCTCCTGGAACGAATGGTCTCGTTGCCAGCGATGGAAGATCTTTGGACGCTTGGCGGCCGTCGAGAAGATCAGTCCACTATTGAGGGATTGGAGATGATCCGAGAACTTTGGGGTCTCCTTAACATGTCTCCTGGTTTGCGCGCCTACCCTGAGCCTTACTTGCCCCTCGGCGCCATTCCCAATGAGCAACTTCCGTCCATGGCCAATTACACCTTACACCATAATGATCCGATACCAGAACCGCAAGTGTACTTTACTGTGTTCGGCATGAATGATATGGAGGTGACTAATGCACTCACGAAATTCTTCATGAGGCATGAATGGAGCGATATGGCAAGTAAATACAAAGCCTGCCTTAGGGAATCTTTGTAGGTGATATCCTAGTTCTCACATTGCATGACAAGAATTACTAACATATAAAAATCGCTTGGCAGCCCGCATCATAATTACGAAGCCCTAAATTATATCCACTCGTACATTTCCTTCTCCTACCGAAATAACAAGCCATATTTAAGTGTGTATCTCCACTCATTTGAAACTGGTGAATGGCCTGTGTGT ; END; BEGIN ASSUMPTIONS; TYPESET * UNTITLED = unord: 1 - 1362; END; BEGIN CODONS; CODESET * UNTITLED = universal: 1 - 1362; END; BEGIN MESQUITECHARMODELS; ProbModelSet * UNTITLED = 'Jukes-Cantor': 1 - 1362; END; BEGIN TREES; Title MLanalysis_for_copies_of_the_dmaW_gene; ID 0156bafc016112; LINK Taxa = Taxa; TRANSLATE [0] n0 Epichloe_festucae_var._lolii_SE, [1] n1 Epichloe_festucae_JN167226, [2] n2 Epichloe_typhina_JN182231, [3] n3 Festuca_arundinacea_Taxonomic_Group_5_NEA19, [4] n4 Festuca_arundinacea_Taxonomic_Group_5_NEA18, [5] n5 Festuca_arundinacea_Taxonomic_Group_4_NEA33, [6] n6 Festuca_arundinacea_Taxonomic_Group_2_NEA17_GC1, [7] n7 Festuca_arundinacea_Taxonomic_Group_2_NEA17_GC2, [8] n8 Festuca_arundinacea_Taxonomic_Group_2_NEA32_GC1, [9] n9 Festuca_arundinacea_Taxonomic_Group_2_NEA32_GC2, [10] n10 Epichloe_coenophiala_NEA22_GC1, [11] n11 Epichloe_coenophiala_NEA22_GC2, [12] n12 Epichloe_coenophiala_NEA20_GC1, [13] n13 Epichloe_coenophiala_NEA20_GC2, [14] n14 Epichloe_coenophiala_NEA16_GC1, [15] n15 Epichloe_coenophiala_NEA16_GC2, [16] n16 Epichloe_coenophiala_NEA14_GC1, [17] n17 Epichloe_coenophiala_NEA14_GC2, [18] n18 Epichloe_coenophiala_E34_GC1, [19] n19 Epichloe_coenophiala_E34_GC2; TREE tree_1 = ((((((n1:0.00090945,n19:0.0)0.2860:0.0,n17:0.0)0.3660:0.0,(n0:0.0,n9:0.00090904)0.4280:0.00090945)0.2100:0.0,n13:0.00090889)0.3640:0.0,(n11:0.00090826,(n7:0.00273379,n15:0.00090681)0.5440:0.0018235)0.2760:0.00091058)0.8940:0.00269335,n2:0.00368789,(n16:0.0,((((n4:0.0,n6:0.00090857)0.3340:0.0,n3:0.0)0.6420:0.0,n8:0.00090906)0.8280:0.00272806,((n5:0.00090849,n18:0.0)0.1500:0.0,(n10:0.0,(n12:0.0,n14:0.0)0.1380:0.0)0.0820:0.0)0.7600:0.0)0.9780:0.00455656)1.0000:0.02415989)root; END; Begin MESQUITE; MESQUITESCRIPTVERSION 2; TITLE AUTO; tell ProjectCoordinator; timeSaved 1472016344394; getEmployee #mesquite.minimal.ManageTaxa.ManageTaxa; tell It; setID 0 3870044254704049466; tell It; attachments ; endTell; endTell; getEmployee #mesquite.charMatrices.ManageCharacters.ManageCharacters; tell It; setID 0 7946699366242580711; mqVersion 310; checksumv 0 3 3735633733 null getNumChars 1362 numChars 1362 getNumTaxa 20 numTaxa 20 short true bits 15 states 15 sumSquaresStatesOnly 572697.0 sumSquares 572697.0 longCompressibleToShort false usingShortMatrix true NumFiles 1 NumMatrices 1; mqVersion; endTell; getWindow; tell It; suppress; setResourcesState false false 100; setPopoutState 300; setExplanationSize 0; setAnnotationSize 0; setFontIncAnnot 0; setFontIncExp 0; setSize 1160 614; setLocation 148 311; setFont SanSerif; setFontSize 10; getToolPalette; tell It; endTell; desuppress; endTell; getEmployee #mesquite.minimal.ManageTaxa.ManageTaxa; tell It; showTaxa #3870044254704049466 #mesquite.lists.TaxonList.TaxonList; tell It; setTaxa #3870044254704049466; getWindow; tell It; newAssistant #mesquite.lists.TaxonListCurrPartition.TaxonListCurrPartition; setExplanationSize 30; setAnnotationSize 20; setFontIncAnnot 0; setFontIncExp 0; setSize 1060 542; setLocation 148 311; setFont SanSerif; setFontSize 10; getToolPalette; tell It; endTell; endTell; showWindow; getEmployee #mesquite.lists.ColorTaxon.ColorTaxon; tell It; setColor Red; removeColor off; endTell; getEmployee #mesquite.lists.TaxonListAnnotPanel.TaxonListAnnotPanel; tell It; togglePanel off; endTell; endTell; endTell; getEmployee #mesquite.trees.BasicTreeWindowCoord.BasicTreeWindowCoord; tell It; makeTreeWindow #3870044254704049466 #mesquite.trees.BasicTreeWindowMaker.BasicTreeWindowMaker; tell It; suppressEPCResponse; setTreeSource #mesquite.trees.StoredTrees.StoredTrees; tell It; setTreeBlock 1; setTreeBlockID 0156bafc016112; toggleUseWeights off; endTell; setAssignedID 2139.1472016170141.5728019853049142236; getTreeWindow; tell It; setExplanationSize 30; setAnnotationSize 20; setFontIncAnnot 0; setFontIncExp 0; setSize 1060 542; setLocation 148 311; setFont SanSerif; setFontSize 10; getToolPalette; tell It; endTell; setActive; getTreeDrawCoordinator #mesquite.trees.BasicTreeDrawCoordinator.BasicTreeDrawCoordinator; tell It; suppress; setTreeDrawer #mesquite.trees.SquareLineTree.SquareLineTree; tell It; setNodeLocs #mesquite.trees.NodeLocsStandard.NodeLocsStandard; tell It; branchLengthsToggle off; toggleScale on; toggleBroadScale off; toggleCenter on; toggleEven on; setFixedTaxonDistance 0; endTell; setEdgeWidth 4; showEdgeLines on; orientUp; endTell; setBackground White; setBranchColor Black; showNodeNumbers off; showBranchColors on; labelBranchLengths off; centerBrLenLabels on; showBrLensUnspecified on; showBrLenLabelsOnTerminals on; setBrLenLabelColor 0 0 255; setNumBrLenDecimals 6; desuppress; getEmployee #mesquite.trees.BasicDrawTaxonNames.BasicDrawTaxonNames; tell It; setColor Black; toggleColorPartition off; toggleColorAssigned on; toggleShadePartition off; toggleShowFootnotes on; toggleNodeLabels on; toggleCenterNodeNames off; toggleShowNames on; namesAngle ?; endTell; endTell; setTreeNumber 1; setDrawingSizeMode 0; toggleLegendFloat on; scale 0; toggleTextOnTree off; togglePrintName on; showWindow; endTell; desuppressEPCResponse; getEmployee #mesquite.trees.ColorBranches.ColorBranches; tell It; setColor Red; removeColor off; endTell; getEmployee #mesquite.ornamental.BranchNotes.BranchNotes; tell It; setAlwaysOn off; endTell; getEmployee #mesquite.ornamental.ColorTreeByPartition.ColorTreeByPartition; tell It; colorByPartition off; endTell; getEmployee #mesquite.ornamental.DrawTreeAssocDoubles.DrawTreeAssocDoubles; tell It; setOn on; setDigits 4; writeAsPercentage off; toggleCentred off; toggleHorizontal on; toggleWhiteEdges on; toggleShowOnTerminals on; setFontSize 10; setOffset 0 0; endTell; getEmployee #mesquite.ornamental.DrawTreeAssocStrings.DrawTreeAssocStrings; tell It; setOn on; toggleCentred on; toggleHorizontal on; setFontSize 10; setOffset 0 0; toggleShowOnTerminals on; endTell; getEmployee #mesquite.trees.TreeInfoValues.TreeInfoValues; tell It; panelOpen false; endTell; endTell; endTell; getEmployee #mesquite.charMatrices.BasicDataWindowCoord.BasicDataWindowCoord; tell It; showDataWindow #7946699366242580711 #mesquite.charMatrices.BasicDataWindowMaker.BasicDataWindowMaker; tell It; getWindow; tell It; setExplanationSize 30; setAnnotationSize 20; setFontIncAnnot 0; setFontIncExp 0; setSize 1060 542; setLocation 148 311; setFont SanSerif; setFontSize 10; getToolPalette; tell It; endTell; setTool mesquite.charMatrices.BasicDataWindowMaker.BasicDataWindow.arrow; colorCells #mesquite.charMatrices.ColorByState.ColorByState; tell It; setStateLimit 9; toggleUniformMaximum on; endTell; colorRowNames #mesquite.charMatrices.TaxonGroupColor.TaxonGroupColor; colorColumnNames #mesquite.charMatrices.CharGroupColor.CharGroupColor; colorText #mesquite.charMatrices.NoColor.NoColor; setBackground White; toggleShowNames on; toggleShowTaxonNames on; toggleTight off; toggleThinRows off; toggleShowChanges off; toggleSeparateLines off; toggleShowStates on; toggleAutoWCharNames off; toggleAutoTaxonNames off; toggleShowDefaultCharNames off; toggleConstrainCW on; toggleBirdsEye off; toggleShowPaleGrid off; toggleShowPaleCellColors off; toggleShowPaleExcluded off; togglePaleInapplicable on; toggleShowBoldCellText off; toggleAllowAutosize off; toggleColorsPanel off; toggleLinkedScrolling on; toggleScrollLinkedTables off; endTell; showWindow; getWindow; tell It; forceAutosize; endTell; getEmployee #mesquite.charMatrices.AlterData.AlterData; tell It; toggleBySubmenus off; endTell; getEmployee #mesquite.charMatrices.ColorCells.ColorCells; tell It; setColor Red; removeColor off; endTell; getEmployee #mesquite.categ.StateNamesStrip.StateNamesStrip; tell It; showStrip off; endTell; getEmployee #mesquite.charMatrices.AnnotPanel.AnnotPanel; tell It; togglePanel off; endTell; getEmployee #mesquite.charMatrices.CharReferenceStrip.CharReferenceStrip; tell It; showStrip off; endTell; getEmployee #mesquite.charMatrices.QuickKeySelector.QuickKeySelector; tell It; autotabOff; endTell; getEmployee #mesquite.charMatrices.SelSummaryStrip.SelSummaryStrip; tell It; showStrip off; endTell; getEmployee #mesquite.align.AlignToDropped.AlignToDropped; tell It; gapCosts 8 3 2 2; subCosts 10 5 10 10 10 5 5 10 10 10 5 10; endTell; getEmployee #mesquite.molec.ColorByAA.ColorByAA; tell It; emphasizeDegeneracy off; endTell; getEmployee #mesquite.molec.SequenceInfoEditor.SequenceInfoEditor; tell It; panelOpen false; endTell; endTell; endTell; endTell; end;