NEXUS
[File created by TreeBASE:  1/16/09  15:32:41]
[Matrix accession#: M3605]

BEGIN TAXA;
	TITLE M3605;
	DIMENSIONS  NTAX=13;
	TAXLABELS
		Argyroxiphium_sandwicense_sandwicense_ITS	Argyroxiphium_sandwicense_macrocephalum_ITS	Dubautia_waianapanapaensis_ITS	Dubautia_scabra_PH_ITS	Dubautia_scabra_OL_ITS	Dubautia_scabra_HV_ITS	Dubautia_reticulata_ITS	Dubautia_platyphylla_ITS	Dubautia_menziesii_ITS	Dubautia_linearis_ITS	Dubautia_laxa_hirsuta_ITS	Dubautia_ciliolata_ITS	Dubautia_arborea_ITS
	;
END;

BEGIN CHARACTERS;
	TITLE M3605;
	DIMENSIONS NCHAR=644;
	FORMAT DATATYPE = DNA MISSING = ? GAP = - ;
	MATRIX
		Argyroxiphium_sandwicense_sandwicense_ITS         TCGAATCCTGCACAGCAGAACGACCCGTGAACACGTACAACAACCTGGCCTCATGAGGACTGATCAATTTTGCTTCGGTCCTTGCGTGGCCATGTCGGCCTGTGTCTGTGAGCTCCTTGGCGGGACTCATGGACATGTTGTCGGCACAACAACAA-CCCCCGGCACGGCACGTGCCAAGGAAAACCAAACTTTAGAAGGTCCATGTAATTGACTCCCAGTTTCTGGTGTGTTCATTGTTCGTGGCTTCTTTTTAATCATAAATGACTCTCGGCAACGGATATCTCGGCTCACGCATCGATGAAGAACGNNNNNNNNNNNNNTACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTTTTTGAACGCAAGTTGCGCCCGAAGCCTTCTGGTTGAGGGCACGTCTGCCTGGGCGTCACGCATCACGTCGCCCCCACCATCCATCCCTGACCGGATGTGTTGAT-GTGGGCGGAGATTGGTCTCCCGTGTCCAGTTTGCGGTTGGCTTAAATACGAGTCTTGTCTAGATGGACGCACGACTAGTGGTGGTTGATTACACAGTCGTCTCGTGTCGTGCCTTCCTATTCTTGAAGCAGAAGACTCTTAAAATACCCCGACGTGTTGTCTTTTGATGGCGCTTTGA
		Argyroxiphium_sandwicense_macrocephalum_ITS       TCGAATCCTGCACAGCAGAACGACCCGTGAACACGTACAACAACCTGGCCTCATGAGGACTGATCAATTTTGCTTCGGTCCTTGCGTGGCCATGTCGGCCTGTGTCTGTGAGCTCCTTGGCGGGACTCATGGACATGTTGTCGGCACAACAACAA-CCCCCGGCACGGCACGTGCCAAGGAAAACCAAACTTTAGAAGGTCCATGTAATTGACTCCCAGTTTCTGGTGTGTTCATTGTTCGTGGCTTCTTTTTAATCATAAATGACTCTCGGCAACGGATATCTCGGCTCACGCATCGATGAAGAACGNNNNAAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTTTTTGAACGCAAGTTGCGCCCGAAGCCTTCTGGTTGAGGGCACGTCTGCCTGGGCGTCACGCATCACGTCGCCCCCACCATCCATCCCTGACYGGATGTGTTGAT-GTGGGCGGAGATTGGTCTCCCGTGTCCAGTTTGCGGTTGGCTTAAATACGAGTCTTGTCTAGATGGACGCACGACTAGTGGTGGTTGATTACACAGTCGTCTCGTGTCGTGCCTTCCTATTCTTGAAGCAGAAGACTCTTAAAATACCCCGACGTGTTGTCTTTTGATGGCGCTTTGA
		Dubautia_waianapanapaensis_ITS                    TCGAATCCTGCACAGCAGAACGACCCGTGAACACGTACAACAACCTGGCCTCATGAGGACTGATCAATTTTGCTTCGGTTCTTGCGTGGCCATGTCGTCCTGTGTCTGTGAGCTCCTTGGCGGGACTCATGGACATGTTTTCGGCACAACAACAA-CCCCCGGCACGGCACGTGCCAAGGAAAACCAAACTTTAGAAGGTCCGTGCAATTGACTCCCAGTTTCTGGTGTGTTCATTGTTCGTTGCTTCTTTATAATCATAAACGACTCTCGGCAACGGATATCTCGGCTCACGCATCGATGAAGAACGTAGCAAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTTTTTGAACGCAAGTTGCGCCCGAAGCCTTCTGGTTAAGGGCACGTCTGCCTGGGCGTCATGCATCACGTCGCCCCCACCATCCATCCCTGACCGGATGTGTTGAT-GTGGGCGGAGATTGGTCTCCCGTGTCCATGATGCGGTTGGCCTAAATACGAGTCTTGTCGAGATGGACGCACGACTAGTGGTGGTTGATTACACAGTCGTCTCGTGTCGTGCCTTCCTATTCTTGAAGCAGAAGACTCTTAAAATACCCCGGCGTGTTGTCTTTTGATGGCGCTTTGA
		Dubautia_scabra_PH_ITS                            TCGAATCCTGCACAGCAGAACGACCCGTGAACACGTACAACAACCTGGCCTCATGAGGACTGATCAATTTTGCTTCGGTTCTTGCGTGGCCATGTCGTCCTGTGTCTGTGAGCTCCTTGGCGGGACTCATGGACATGTTGTCGGCACAACAACAA-CCCCCGGCACGGCACGTGCCAAGGAAAACCAAACTTTAGAAGGTCCGTGCAATTGACTCCCAGTTTCTGGTGTGTTCATTGTTCGTTGCTTCTTTATAATCRTAAACGACTCTCGGCAACGGATATCTCGGCTCACGCATCGATGAAGAACGTAGCAAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTTTTTGAACGCAAGTTGCGCCCGAAGCCTTCTGGTTAAGGGCACGTCTGCCTGGGCGTCATGCATCACGTCGCCCCCACCATCCATCCCTGACCGGATGTGTTGAT-GTGGGCGGAGATTGGTCTCCCGTGTCCATGATGCGGTTGGCCTAAATACGAGTCTTGTCGAGATGGACGCACGACTTGTGGTGGTTGATTACACAGTCGTCTCGTGTCGTGCCTTCCTATTCTTGAAGCAGAAGACTCTTAAAATACCCCGGCGTGTTGTCTTTTGATGGCGCTTTGA
		Dubautia_scabra_OL_ITS                            TCGAATCCTGCACAGCAGAACGACCCGTGAACACGTACAACAACCTGGCCTCATGAGGACTGATCAATTTTGCTTCGGTTCTTGCGTGGCCATGTCGTCCTGTGTCTGTGAGCTCCTTGGCGGGACTCATGGACATGTTGTCGGCACAACAACAA-CACTCGGCACGGCACGTGCCAAGGAAAACCAAACTTTAGAAGGTCCGTGCAATTGACTCCCAGTTTCTGGTGTGTTCATTGTTCGTTGCTTCTTTATAATCATAAACGACTCTCGGCAACGGATATCTCGGCTCACGCATCGATGAAGAACGTAGCAAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTTTTTGAACGCAAGTTGCGCCCGAAGCCTTCTGGTTAAGGGCACGTCTGCCTGGGCGTCATGCATCACGTCGCCCCCACCATCCATCCCTGACCGGATGTGTTGAT-GTGGGCGGAGATTGGTCTCCCGTGTCCATGATGCGGTTGGCCTAAATACGAGTCTTGTCGAGATGGACGCACGACTTGTGGTGGTTGATTACACAGTCGTCTCGTGTCGTGCCTTCCTATTCTTGAAGCAGAAGACTCTTAAAATACCCCGGCGTGTTGTCTTTTGATGGCGCTTTGA
		Dubautia_scabra_HV_ITS                            TCGAATCCTGCACAGCAGAACGACCCGTGAACACGTACAACAACCTGGCCTCATGAGGACTGATCAATTTTGCTTCGGTTCTTGCGTGGCCATGTCGTCCTGTGTCTGTGAGCTCCTTGGCGGGACTCATGGACATGTTGTCGGCACAACAACAA-CCCCCGGCACGGCACGTGCCAAGGAAAACCAAACTTTAGAAGGTCCGTGCAATTGACTCCCAGTTTCTGGTGTGTTCATTGTTCGTTGCTTCTTTATAATCRTAAACGACTCTCGGCAACGGATATCTCGGCTCACGCATCGATGAAGAACGTAGCAAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTTTTTGAACGCAAGTTGCGCCCGAAGCCTTCTGGTTAAGGGCACGTCTGCCTGGGCGTCATGCATCACGTCGCCCCCACCATCCATCCCTGACCGGATGTGTTGAT-GTGGGCGGAGATTGGTCTCCCGTGTCCATGATGCGGTTGGCCTAAATACGAGTCTTGTCGAGATGGACGCACGACTTGTGGTGGTTGATTACACAGTCGTCTCGTGTCGTGCCTTCCTATTCTTGAAGCAGAAGACTCTTAAAATACCCCGGCGTGTTGTCTTTTGATGGCGCTTTGA
		Dubautia_reticulata_ITS                           TCGAATCCTGCACAGCAGAACGACCCGTGAACACGTACAACAACCTGGCCTCATGAGGACTGATCAATTTTGCTTCGGTTCTTGCGTGGCCATGTCGTCCTGTGTCTGTGAGCTCCTTGGCGGGACTCATGGACATGTTTTCGGCACAACAACAA-CCCCCGGCACGGCACGTGCCAAGGAAAACCAAACTTTAGAAGGTCCGTGCAATTGACTCCCAGTTTCTGGTGTGTTCATTGTTCGTTGCTTCTTTATAATCATAAACGACTCTCGGCAACGGATATCTCGGCTCACGCATCGATGAAGAACGTAGCAAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTTTTTGAACGCAAGTTGCGCCCGAAGCCTTCTGGTTAAGGGCACGTCTGCCTGGGCGTCATGCATCACGTCGCCCCCACCATCCATCCCTGACCGGATGTGTTGAT-GTGGGCGGAGATTGGTCTCCCGTGTCCATGATGCGGTTGGCCTAAATACGAGTCTTGTCGAGATGGACGCACGACTAGTGGTGGTTGATTACACAGTCGTCTCGTGTCGTGCCTTCCTATTCTTGAAGCAGAAGACTCTTAAAATACCCCGGCGTGTTGTCTTTTGATGGCGCTTTGA
		Dubautia_platyphylla_ITS                          TCGAATCCTGCACAGCAGAACGACCCGTGAACACGTACAACAACCTGGCCTCATGAGGACTGATCAATTTTGCTTCGGTTCTTGCGTGGCCATGTCGTCCTGTGTCTGTGAGCTCCTTGGCGGGACTCATGGACATGTTTTCGGCACAACAACAA-CCCCCGGCACGGCACGTGCCAAGGAAAACCAAACTTTAGAAGGTCCGTGCAATTGACTCCCAGTTTCTGGTGTGTTCATTGTTCGTTGCTTCTTTATAATCATAAACGACTCTCGGCAACGGATATCTCGGCTCACGCATCGATGAAGAACGTAGCAAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTTTTTGAACGCAAGTTGCGCCCGAAGCCTTCTGGTTAAGGGCACGTCTGCCTGGGCGTCATGCATCACGTCGCCCCCACCATCCATCCCTGACCGGATGTGTTGAT-GTGGGCGGAGATTGGTCTCCCGTGTCCATGATGCGGTTGGCCTAAATACGAGTCTTGTCGAGATGGACGCACGACTAGTGGTGGTTGATTACACAGTCGTCTCGTGTCGTGCCTTCCTATTCTTGAAGCAGAAGACTCTTAAAATACCCCGGCGTGTTGTCTTTTGATGGCGCTTTGA
		Dubautia_menziesii_ITS                            TCGAATCCTGCACAGCAGAACGACCCGTGAACACGTACAACAACCTGGCCTCATGAGGACTGATCAATTTTGCTTCGGTTCTTGCGTGGCCATGTCGTCCTGTGTCTGTGAGCTCCTTGGCGGGACTCATGGACATGTTTTCGGCACAACAACAA-CCCCCGGCACGGCACGTGCCAAGGAAAACCAAACTTTAGAAGGTCCGTGCAATTGACTCCCAGTTTCTGGTGTGTTCATTGTTCGTTGCTTCTTTATAATCATAAACGACTCTCGGCAACGGATATCTCGGCTCACGCATCGATGAAGAACGTAGCAAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTTTTTGAACGCAAGTTGCGCCCGAAGCCTTCTGGTTAAGGGCACGTCTGCCTGGGCGTCATGCATCACGTCGCCCCCACCATCCATCCCTGACCGGATGTGTTGAT-GTGGGCGGAGATTGGTCTCCCGTGTCCATGATGCGGTTGGCCTAAATACGAGTCTTGTCGAGATGGACGCACGACTAGTGGTGGTTGATTACACAGTCGTCTCGTGTCGTGCCTTCCTATTCTTGAAGCAGAAGACTCTTAAAATACCCCGGCGTGTTGTCTTTTGATGGCGCTTTGA
		Dubautia_linearis_ITS                             TCGAATCCTGCACAGCAGAACGACCCGTGAACACGTACAACAACCTGGCCTCATGAGGACTGATCAATTTTGCTTCGGTTCTTGCGTGGCCATGTCGTCCTGTGTCTGTGAGCTCCTTGGCGGGACTCATGGACATGTTGTCGGCACAACAACAA-CCCCCGGCACGGCACGTGCCAAGGAAAACCAAACTTTAGAAGGTCCGTGCAATTGACTCCCAGTTTCTGGTGTGTTCATTGTTCGTTGCTTCTTTATAATCATAAACGACTCTCGGCAACGGATATCTCGGCTCACGCATCGATGAAGAACGTAGCAAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTTTTTGAACGCAAGTTGCGCCCGAAGCCTTCTGGTTAAGGGCACGTCTGCCTGGGCGTCATGCATCACGTCGCCCCCACCATCCATCCCTGACCGGATGTGTTGAT-GTGGGCGGAGATTGGTCTCCCGTGTCCATGATGCGGTTGGCCTAAATACGAGTCTTGTCGAGATGGACGCACGACTTGTGGTGGTTGATTACACAGTCGTCTCGTGTCGTGCCTTCCTATTCTTGAAGCAGAAGACTCTTAAAATACCCCGGCGTGTTGTCTTTTGATGGCGCTTTGA
		Dubautia_laxa_hirsuta_ITS                         TCGAATCCTGCACAGCAGAACGACCCGTGAACACGTACAACAACCTGGCCACATGAGGACTGATCAATTTTGCTTCGGTTCTTGCGTGGCCATGTCGGCCTGTGTCTGTGAGCTCCTCGGCGGGACTCATGGGCATGTTGTCGGCACAACAACAA-CCCCCGGCACGGCAYGTGCCAAGGAAAACCAAACTTTAGAAGGTCCGTGCAATTGATTCCCAGTTTCTGGTGTGTTCATTGTTCGTGGCTTCTTTATAATCATAAACGACTCTCGGCAACGGATATCTCGGCTCATGCATCGATGAAGAACGTAGCAAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTTTTTGAACGCAAGTTGCGCCCGAAGCCTTCTGGTTGAGGGCACGTCTGCCTGGGCGTCACGCGTCACGTCGCCCCCACCATCCATCCCTGACCGGATGTGTTGAT-GTGGGCGGAGATTGGTCTCCCGTGTCCATGATGCGGTTGGCCTAAATACGAGTCTTGTCGAGATGGACGCACGACTAGTGGTGGTTGATTACACAGTCGTCTCGTGTTGTGCCTTCCTACTCTTGAAGCAGAAGACTCTTAAAATACCCTGACGTGTTGTCTTTGGATGGTGCTTTGA
		Dubautia_ciliolata_ITS                            TCGAATCCTGCACAGCAGAACGACCCGTGAACACGTACAACAACCTGGCCTCATGAGGACTGATCAATTTTGCTTCGGTTCTTGCGTGGCCATGTCGTCCTGTGTCTGTGAGCTCCTTGGAGGGACTCATGGACATGTTGTCGGCACAACAACAA-CCCCCGGCACGGCACGTGCCAAGGAAAACCAAACTTTAGAAGGTCCGTGCAATTGACTCCCAGTTTCTGGTGTGTTCATTGTTCGTTGCTTCTTTATAATCATAAACGACTCTCGGCAACGGATATCTCGGCTCACGCATCGATGAAGAACGTAGCAAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTTTTTGAACGCAAGTTGCGCCCGAAGCCTTCTGGTTAAGGGCACGTCTGCCTGGGCGTCATGCATCACGTCGCCCCCACCATCCATCCCTGACCGGATGTGTTGAT-GTGGGCGGAGATTGGTCTCCCGTGTCCATGATGCGGTTGGCCTAAATACGAGTCTTGTCGAGATGGACGCACGACTTGTGGTGGTTGATTACACAGTCGTCTCGTGTCGTGCCTTCCTATTCTTGAAGCAGAAGACTCTTAAAATACCCCGGCATGTTGTCTTTTGATGGCGCTTTGA
		Dubautia_arborea_ITS                              TCGAATCCTGCACAGCAGAACGACCCGTGAACACGTACAACAACCTGGCCTCATGAGGACTGATCAATTTTGCTTCGGTTCTTGCGTGGCCATGTCGTCCTGTGTCTGTGAGCTCCTTGGCGGGACTCATGGACATGTTGTCGGCACAACAACAA-CCCCCGGCACGGCACGTGCCAAGGAAAACCAAACTTTAGAAGGTCCGTGCAATTGACTCCCAGTTTCTGGTGTGTTCATTGTTCGTTGCTTCTTTATAATCATAAACGACTCTCGGCAACGGATATCTCGGCTCACGCATCGATGAAGAACGTAGCAAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTTTTTGAACGCAAGTTGCGCCCGAAGCCTTCTGGTTAAGGGCACGTCTGCCTGGGCGTCATGCATCACGTCGCCCCCACCATCCATCCCTGACCGGATGTGTTGAT-GTGGGCGGAGATTGGTCTCCCGTGTCCATGATGCGGTTGGCCTAAATACGAGTCTTGTCGAGATGGACGCACGACTTGTGGTGGTTGATTACACAGTCGTCTCGTGTCGTGCCTTCCTATTCTTGAAGCAGAAGACTCTTAAAATACCCCGGCGTGTTGTCTTTTGATGGCGCTTTGA
	;
END;

BEGIN CODONS;
CODONPOSSET * CodonPositions = 
 N: 1 - 644 ; 
 CODESET * UNTITLED = Universal: all ; 
 END;

BEGIN ASSUMPTIONS;
OPTIONS DEFTYPE = unord PolyTcount = MINSTEPS ; 
 END;