#NEXUS [written Fri Aug 26 14:03:34 CEST 2016 by Mesquite version 3.10 (build 765) at wshb-001-114/127.0.1.1] BEGIN TAXA; DIMENSIONS NTAX=115; TAXLABELS 'JF344692.1.1512_uncultivated_environmental_bacteria' 'Symbiont_of_Kentrophoros_LPFa_S313' 'Symbiont_of_Kentrophoros_UNK_BY8' 'Symbiont_of_Kentrophoros_TC_BZ126' 'Symbiont_of_Kentrophoros_LFY_BY7' 'Symbiont_of_Kentrophoros_SD_S127' 'Symbiont_of_Kentrophoros_TUN_BY2' 'Symbiont_of_Kentrophoros_FW_BZ106' 'Symbiont_of_Kentrophoros_FW_BZ131' 'Symbiont_of_Kentrophoros_BT_S243' 'Symbiont_of_Kentrophoros_FM_BZ176' 'Symbiont_of_Kentrophoros_G_BZ185' 'Symbiont_of_Kentrophoros_H_SA2B15' 'Symbiont_of_Kentrophoros_FB_S136' 'Symbiont_of_Kentrophoros_FBG_S435' 'JQ800923.1.1507_uncultivated_environmental_bacteria' 'EU652572.1.1506_uncultivated_environmental_bacteria' 'JQ800972.1.1506_uncultivated_environmental_bacteria' 'JX504483.1.1538_uncultivated_environmental_bacteria' 'DQ513032.1.1504_uncultivated_environmental_bacteria' 'HE817831.1.1534_uncultivated_environmental_bacteria' 'JQ347371.1.1498_uncultivated_environmental_bacteria' 'JN977228.1.1533_uncultivated_environmental_bacteria' 'AB694061.1.1406_uncultivated_environmental_bacteria' 'JF809744.1.1399_uncultivated_environmental_bacteria' 'FN553505.1.1500_uncultivated_environmental_bacteria' 'JF344142.1.1499_uncultivated_environmental_bacteria' 'FJ905747.1.1417_uncultivated_environmental_bacteria' 'JF272102.1.1499_uncultivated_environmental_bacteria' 'KC009908.1.1512_uncultivated_environmental_bacteria' 'GQ857549.1.1488_Diplorickettsia_massiliensis' 'AY359282.1.1482_Aquicella_lusitana' 'HM208383.1.1465_Coxiella_burnetii' 'AF406554.1.1461_Alkalilimnicola_ehrlichii_MLHE-1' 'AF114783.1.1464_Alkalispirillum_mobile' 'AB643473.1.1507_Halorhodospira_neutriphila' 'CP000544.952248.953785_Halorhodospira_halophila_SL1' 'M26631.1.1487_Arhodomonas_aquaeolei' 'HM038001.1.1482_Nitrococcus_mobilis' 'AM404264.1.1448_Aquisalimonas_asiatica' 'EF103127.1.1447_Natronocella_acetinitrilica' 'AF287298.1.1539_Nitrosococcus_halophilus' 'AY690336.1.1541_Nitrosococcus_oceani' 'EU700082.1.1495_Ectothiorhodospira_shaposhnikovii' 'AY298904.1.1445_Ectothiorhodosinus_mongolicus' 'AGFD01000020.25655.27178_Thiorhodospira_sibirica_ATCC_700588' 'AF126545.1.1465_Thioalkalivibrio_denitrificans' 'AF329083.1.1474_Thioalkalivibrio_jannaschii' 'DQ469584.1.1297_Thiohalophilus_thiocyanatoxydans' 'AF481118.1.1433_Thioalkalispira_microaerophila' 'L25709.1.1413_Solemya_reidi_gill_symbiont' 'AJ223234.1.1391_Chromatium_okenii' 'AGFC01000063.14993.16509_Thiocystis_violascens_DSM_198' 'CP001896.2025534.2027048_Allochromatium_vinosum_DSM_180' 'AJ006063.1.1393_Lamprocystis_roseopersicina' 'EF999974.1.1500_Thiodictyon_bacillosum' 'AF112998.1.1494_Thiocapsa_roseopersicina' 'AM748925.1.1440_Thiophaeococcus_mangrovi' 'FN293057.1.1451_Thiorhodococcus_minor' 'FN293055.1.1459_Thiococcus_pfennigii' 'X84316.1.1452_Rhabdochromatium_marinum' 'AB016986.1.1456_Thiorhodovibrio_winogradskyi' 'AJ002796.1.1424_Thiohalocapsa_halophila' 'AJ006212.1.1402_Lamprocystis_purpurea' 'X93472.1.1451_Halochromatium_glycolicum' 'AF328856.1.1497_Olavius_algarvensis_Gamma1_endosymbiont' 'AJ620507.1.1497_Olavius_crassitunicatus_Gamma1_endosymbiont' 'EU439003.1.1869_Candidatus_Thiobios_zoothamnicoli' 'AB214932.1.1414_Alviniconcha_hessleri_gill_endosymbiont' 'AB238964.1.1409_endosymbiont_of_Ifremeria_nautilei' 'AB245479.1.1457_Sulfurivirga_caldicuralii' 'AB266389.1.1525_Thioprofundum_hispidum' 'X87277.1.1516_Leucothrix_mucor' 'FN658699.1.1505_gamma_proteobacterium_ectosymbiont_of_Rimicaris_exoculata' 'AB042545.1.1417_Thiothrix_flexilis' 'AJ620496.1.1501_Olavius_algarvensis_Gamma_3_endosymbiont' 'AM236327.1.1503_thiotrophic_bacterial_endosymbiont_of_Bathymodiolus_heckerae' 'CP000488.1081270.1082807_Candidatus_Ruthia_magnifica_str._Cm_Calyptogena_magnifica' 'FN822779.1.1494_thiotrophic_endosymbiont_of_Bathymodiolus_mauritanicus' 'AY951931.1.1495_Bathymodiolus_azoricus_thioautotrophic_gill_symbiont' 'U77481.1.1459_Lamellibrachia_columna_endosymbiont' 'U77482.1.1452_Escarpia_spicata_endosymbiont' 'U77478.1.1461_endosymbiont_of_Riftia_pachyptila' 'AF432145.1.1540_Sedimenticola_selenatireducens' 'FM211773.1.1500_uncultured_Codakia_orbicularis_gill_symbiont' 'AM418384.1.1521_Pseudoxanthomonas_spadix' 'AB558557.1.1421_Xanthomonas_theicola' 'AB166878.1.1474_Lysobacter_koreensis' 'EF660758.1.1409_Luteimonas_aestuarii' 'FR749910.1.1534_Xanthomonas_perforans' 'U62646.1.1452_Stenotrophomonas_maltophilia' 'AF192343.1.1537_Xylella_fastidiosa' 'DQ239766.1.1488_Arenimonas_malthae' 'AF110274.1.1491_Beggiatoa_alba_B18LD' 'CP000513.1336008.1337539_Dichelobacter_nodosus_VCS1703A' 'AJ717394.1.1486_Suttonella_ornithocola' 'ACKY01000036.4276.5797_Cardiobacterium_hominis_ATCC_15826' 'EU124668.1.1486_Thioalkalibacter_halophilus' 'JN175334.1.1533_Halothiobacillus_neapolitanus' 'AF170419.1.1494_Halothiobacillus_kellyi' 'AY928394.1.1518_Francisella_philomiragia' 'AY102612.1.1544_Caedibacter_taeniospiralis' 'U36941.1.1534_Piscirickettsia_salmonis' 'Z32637.1.1418_Fluoribacter_dumoffii' 'Z49738.1.1472_Legionella_wadsworthii' 'AF227161.1.1474_Tatlockia_maceachernii' 'X72776.1.1468_Methylomonas_aurantiaca' 'AF304196.1.1499_Methylomonas_methanica' 'X72773.1.1470_Methylobacter_whittenburyi' 'X72767.1.1469_Methylomicrobium_agile' 'U67929.1.1451_Methylosphaera_hansonii' 'DQ298025.1.1499_Rheinheimera_chironomi' 'X95460.1.1491_Methylophaga_thalassica' 'U89300.1.1491_Methylocaldum_szegediense' 'X72771.1.1473_Methylococcus_capsulatus' ; END; BEGIN CHARACTERS; DIMENSIONS NCHAR=1734; FORMAT DATATYPE = DNA GAP = - MISSING = ?; MATRIX 'JF344692.1.1512_uncultivated_environmental_bacteria' --------agagtttga-tcctggctcagattgaa-cgctggcggtacgcttaac-acatgc-aagtcgaacggtaacggga-----------------------gaga----------------------------------------------------------------------tttatc-------tcttgccgacgagtggcggacgggtgagtaacgcgtaggaatctgcctagc-agtgggggacaacttggggaaactcgagctaataccgcatatatttctttatctt-----gaaggtagagaaggaaagg-----ggggt--------ctt------t--ggcctctcgctgtta-gatgagcctgcgtcggattagcttgttggtggggtaacggcctacc--aaggctacgatccgtagctggtctgagaggatgatcagccacactgggactgagacacggcccagactcctacggg-aggcagcagtg--gggaa-tattggacaatggacgcaagcctgatccagcaataccgcgtgtgtgaataaggccttcgggttgtaaagcactttcagtggggaagaaaggtccgagg-ttaataccctctgggc-tttgacgttacccaaagaagaagcaccggctaactccgtgccagcagccgcggtaatacggagggtgcgagcgttaatcggaattactgggcgtaaagggc-gcgtaggtggcttggtaagtcgggtgtgaaagccctgggcttaacctgggaatggcattcgatactgctaagct-agagtacggtagagggaagcggaatt-cccggtgtagcggtgaaatgcgtagatatcgggaggaacatcagtggcgaagg--cggcttcctggactgatactgacactgaggcgcgaaagcgtgggg-agcaaacaggattagataccctggcagtccacgccctaaacgatgagaactagccgttgggagcgtt-------a-gagctcttagtggcgaagctaacgcgataagtt-ctccgcctggggagtacggccgc-aaggttaaaactcaaa-ggaattgac-gggggcccgcacaagcggtggagcatgtggtttaattcgatgcaacgcgaagaaccttacctgcttttgac-atccttggaaccccacggagacgtgggggtgccttcgggagcca-agtgacaggtgctgcatggc-tgt-cgtcagctcgtgtcgcg--agatgttgggttaagtc-ccgtaacgagcgcaacccctgtccctagttgccagcg-gttcg-gccgggaactctagggagactgccggtgataaaccggaggaaggtggggatgacgtcaagtcatcatggcctttataagcagggctacacacgtgctacaatggccggtacagagagtcgcgagcc--tgtgagggtgagctaatcccgaaaagccggtcgtagtccggatcggagtctgcaactcgactccgtgaagtcggaatcgctagtaatcgcagatcagaa-cgctgcggtgaatacgttcccgggccttg-tacacaccgcccgtcacaccatgggagtgggttgcaccagaagtaggttgcttaactttc------gagagggcgctt-accacggtgtggttcatgactggggtgaagtcgtaacaaggta------------------------------------ 'Symbiont_of_Kentrophoros_LPFa_S313' ----ctgaagagtttga-tcctggctcagattgaa-cgctggcggtatgcttaac-acatgc-aagtcgaacggtaacggga-----------------------gaga----------------------------------------------------------------------tttatc-------tcttgccgacgagtggcggacgggtgagtaacgcgtaggaatctgcctagc-agtgggggacaacttggggaaactcgagctaataccgcatatatttctttatctt-----gaaggtagagaaggaaagg-----ggggt--------ctt------t--ggcctctcgctgtta-gatgagcctgcgtcggattagcttgttggtggggtaacggcctacc--aaggcgacgatccgtagctggtctgagaggatgatcagccacactgggactgagacacggcccagactcctacggg-aggcagcagtg--gggaa-tattggacaatgggcgcaagcctgatccagcaataccgcgtgtgtgaataaggccttcgggttgtaaagcactttcagtggggaagaaaggtccgagg-ttaataccctctgggc-tttgacgttacccaaagaagaagcaccggctaactccgtgccagcagccgcggtaatacggagggtgcgagcgttaatcggaattactgggcgtaaagggc-gcgtaggtggcttggtaagtcgggtgtgaaagccctgggcttaacctgggaatggcattcgatactgctaagct-agagtacggtagagggaagcggaatt-cccggtgtagcggtgaaatgcgtagatatcgggaggaacatcagtggcgaagg--cggcttcctggactgatactgacactgaggcgcgaaagcgtgggg-agcaaacaggattagataccctggtagtccacgccctaaacgatgagaactagccgttgggagcgtt-------a-gagctcttagtggcgaagctaacgcgataagtt-ctccgcctggggagtacggccgc-aaggttaaaactcaaa-ggaattgac-gggggcccgcacaagcggtggagcatgtggtttaattcgatgcaacgcgaagaaccttacctgcttttgac-atccttggaaccccacggagacgtgggggtgccttcgggagcca-agtgacaggtgctgcatggc-tgt-cgtcagctcgtgtcgtg--agatgttgggttaagtc-ccgtaacgagcgcaacccctgtccctagttgccagcg-gttcg-gccgggaactctagggagactgccggtgataaaccggaggaaggtggggatgacgtcaagtcatcatggcctttataagcagggctacacacgtgctacaatggccggtacagagagtcgcgaacc--tgtgagggtaagctaatcccggaaagccggtcgtagtccggatcggagtctgcaactcgactccgtgaagtcggaatcgctagtaatcgcagatcagaa-cgctgcggtgaatacgttcccgggccttg-tacacaccgcccgtcacaccatgggagtgggttgcaccagaagtaggttgcttaactttc------gagagggcgctt-accacggtgtggttcatgactggggtgaagtcgtaacaaggtagccgtaggggaacctgcggctggatcacctccttt- 'Symbiont_of_Kentrophoros_UNK_BY8' ----ctgaagagtttga-tcctggctcagattgaa-cgctggcggtatgcttaac-acatgc-aagtcgaacggtaacggga-----------------------gaga----------------------------------------------------------------------tttgtc-------tcttgccgacgagtggcggacgggtgagtaacgcgtaggaatctgcctggc-agtgggggacaacttggggaaactcgagctaataccgcatatatttctttatctt-----gaaggtagagaaggaaagg-----ggggt--------ctt------t--ggcctctcgctgtta-gatgagcctgcgtcggattagcttgttggtggggtaacggcctacc--aaggcgacgatccgtagctggtctgagaggatgatcagccacactgggactgagacacggcccagactcctacggg-aggcagcagtg--gggaa-tattggacaatgggcgcaagcctgatccagcaataccgcgtgtgtgaataaggccttcgggttgtaaagcactttcagtggggaagaaaggtccgagg-ttaataccttctgggc-tttgacgttacccaaagaagaagcaccggctaactccgtgccagcagccgcggtaatacggagggtgcgagcgttaatcggaattactgggcgtaaagggc-gcgtaggtggcttggtaagtcgggtgtgaaagccccgggctcaacctgggaatggcattcgatactgctaagct-agagtatggtagagggaagcggaatt-cccggtgtagcggtgaaatgcgtagatatcgggaggaacatcagtggcgaagg--cggcttcctggactgatactgacactgaggcgcgaaagcgtgggg-agcaaacaggattagataccctggtagtccacgccctaaacgatgagaactagccgttgggagcgtt-------a-gagctcttagtggcgaagctaacgcgataagtt-ctccgcctggggagtacggccgc-aaggttaaaactcaaa-ggaattgac-gggggcccgcacaagcggtggagcatgtggtttaattcgatgcaacgcgaagaaccttacctgcttttgac-atccttggaaccccacggagacgtgggggtgccttcgggagcca-agtgacaggtgctgcatggc-tgt-cgtcagctcgtgtcgtg--agatgttgggttaagtc-ccgtaacgagcgcaacccctgtccctagttgccagcg-gttcg-gccgggaactctagggagactgccggtgataaaccggaggaaggtggggatgacgtcaagtcatcatggcctttataagcagggctacacacgtgctacaatggccggtacagagagtcgcgaacc--tgtgagggtaagctaatcccggaaagccggtcgtagtccggatcggagtctgcaactcgactccgtgaagtcggaatcgctagtaatcgcagatcagaa-cgctgcggtgaatacgttcccgggccttg-tacacaccgcccgtcacaccatgggagtgggttgcaccagaagtaggttgcttaactttc------gagagggcgctt-accacggtgtggttcatgactggggtgaagtcgtaacaaggtagccgtaggggaacctgcggctggatcacctccttt- 'Symbiont_of_Kentrophoros_TC_BZ126' -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------agcaatgccgcgtgtgtgaagaaggccttcgggttgtaaagcactttcagtggggaagaaaggtctgggg-ttaataccctctggat-tttgacgttacccaaagaagaagcaccggctaactccgtgccagcagccgcggtaatacggagggtgcgagcgttaatcggaattactgggcgtaaagggc-gcgtaggtggcttggtaagtcgggtgtgaaagccctgggcttaacctaggagttgcattcgatactgccaggct-agagtacggtagagggaggcggaatt-cccggtgtagcggtgaaatgcgtagatatcgggaggaacatcagtggcgaagg--cggcttcctggatcgatactgacactgaggcgcgaaagcgtgggg-agcaaacaggattagataccctggtagtccacgccctaaacgatgagaactagccgttgggagcgtt-------a-gagctcttagtggcgaagctaacgcgataagtt-ctccgcctggggagtacggccgc-aaggttaaaactcaaa-ggaattgac-gggggcccgcacaagcggtggagcatgtggtttaattcgatgcaacgcgaagaaccttacctgcttt-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 'Symbiont_of_Kentrophoros_LFY_BY7' ----ctgaagagtttga-tcctggctcagattgaa-cgctggcggcatgcttaac-acatgc-aagtcgaacggtaacgggg-----------------------gaga----------------------------------------------------------------------tttatc-------tcctgccgacgagtggcggacgggtgagtaacgcgtgggaatctacccggc-agtgggggacaactcggggaaactcgagctaataccgcatatatttctttgttcg---aaaggataaagaaggaaaggg-----gggtc--------ttt------g--acctcatcgctgtcgtgatgagcctgcgtcggattagcttgttggtggggtaatggcctacc--aaggcgacgatccgtagctggtctgagaggatgatcagccacactgggactgagacacggcccagactcctatggg-aggcagcagtg--gggaa-tattggacaatgggcgaaagcctgatccagcaatgccgcgtgtgtgaagaaggccttcgggttgtaaagcactttcagtggggaagaagagcctgagg-ttaatatcctt-gggtctttgacgttacccaaagaagaagcaccggctaactccgtgccagcagccgcggtaatacggagggtgcgagcgttaatcggaattactgggcgtaaagggc-gcgtaggtggcttagtaagtcgggtgtgaaagccccgggcttaacctgggaattgcattcgatactgctaggct-agagtacggtagagggaagcggaatt-cccggtgtagcggtgaaatgcgtagatatcgggaggaacatcagtggcgaagg--cggctttctggatcgatactgacactgaggcgcgaaagcgtgggg-agcaaacaggattagataccctggtagtccacgccctaaacgatgagaactagccgttgggggcatt-------a-aagcttttggtggcgtagctaacgcgataagtt-ctccgcctggggagtacggccgc-aaggttaaaactcaaa-ggaattgac-gggggcccgcacaagcggtggagcatgtggtttaattcgatgcaacgcgaagaaccttacctgcttttgac-atccttggaattctgtggaaacgcggaagtgccttcgggagccg-agtgacaggtgctgcatggc-tgt-cgtcagctcgtgtcgtg--agatgttgggttaagtc-ccgtaacgagcgcaacccttgtccctagttgccagcg-attcg-gtcgggaactctagggggactgccggtgataaaccggaggaaggtggggatgacgtcaagtcatcatggcctttataagcagggctacacacgtgctacaatggccggtacagagagttgcgaacc--tgtgagggtaagctaatcccggaaagccggtcgtagtccggatcggagtctgcaactcgactccgtgaagtcggaatcgctagtaatcgcggatcagca-tgccgcggtgaatacgttcccgggccttg-tacacaccgcccgtcacaccatgggagtgggttgcaccagaagtaggttgcttaactttc------gagagggcgctt-accacggtgtggttcatgactggggtgaagtcgtaacaaggtagccgtaggggaacctgcggctggatcacctccttt- 'Symbiont_of_Kentrophoros_SD_S127' ----ctgaagagtttga-tcctggctcagattgaa-cgctggcggcatgcttaac-acatgc-aagtcgaacggtaacggaa-----------------------gaga----------------------------------------------------------------------tttatc-------tcttgccgacgagtggcggacgggtgagtaacgcgtgggaatctgccttgc-agtgggggataactcggggaaactcgagctaataccgcatatatttccttgcttt------agggtgaggaaggaaagg-----ggggc--------ttc------g--gcctcatcgctgtaa-gatgagcctgcgtcggattagcttgttggtggggtaatggcctacc--aaggctgcgatccgtagctggtctgagaggatgatcagccacactgggactgagacacggcccagactcctacggg-aggcagcagtg--gggaa-tattggacaatgggtgaaaacctgatccagcaatgccgcgtgtgtgaagaaggccttcgggttgtaaagcactttcagtggggaagaaatgtccaagg-ttaataccctt-ggat-cttgacgttacccaaagaagaagcaccggctaactccgtgccagcagccgcggtaatacggagggtgcgagcgttaatcggaattactgggcgtaaagggc-gcgtaggtggcttagcaagtcgggtgtgaaagccccgggcttaacctgggaatggcattcgatactgctaggct-agagtacggtagagggaagcggaatt-ctcggtgtagcggtgaaatgcgtagatatcgggaggaacatcagtggcgaagg--cggcttcctggatcgatactgacactgaggcgcgaaagcgtgggg-agcaaacaggattagataccctggtagtccacgccctaaacgatgagaactagccgttggaaacatt-------a-aagtttttggtggcgcagctaacgcgataagtt-ctccgcctggggagtacggccgc-aaggttaaaactcaaa-ggaattgac-gggggcccgcacaagcggtggagcatgtggtttaattcgatgcaacgcgaagaaccttacctgcttttgac-atcctcggaattctgcggaaacgtggaagtgccttcgggagccg-agtgacaggtgctgcatggc-tgt-cgtcagctcgtgtcgtg--agatgttgggttaagtc-ccgtaacgagcgcaacccttgtccctagttgccagcg-gttcg-gccgggaactctagggagactgccggtgataaaccggaggaaggtggggatgacgtcaagtcatcatggcctttatgagcagggctacacacgtgctacaatggccggtacagagagtcgcgaacc--cgtgagggtaagctaatcccgaaaagccggtcgtagtccagatcggagtctgcaactcgactccgtgaagtcggaatcgctagtaatcgcggatcagca-cgctgcggtgaatacgttcccgggccttg-tacacaccgcccgtcacaccatgggagtgggttgcaccagaagtaggttgcttaactttc------gagagggcgctt-accacggtgtggttcatgactggggtgaagtcgtaacaaggtagccgtaggggaacctgcggctggatcacctccttt- 'Symbiont_of_Kentrophoros_TUN_BY2' ----ctgaagagtttga-tcctggctcagattgaa-cgctggcggcatgcttaac-acatgc-aagtcgaacggtaacgga------------------------agag----------------------------------------------------------------------tttact--------cttgccgacgagtggcggacgggtgagtaacgcgtaggaatctacctgac-agtgggggacaactcggggaaactcgagctaataccgcatacgttcctgggcctc---aaatggg-ctgaggaagaaag-----agggg--------ctt------t--agcctcgtgctgtta-gatgagcctgcgtcggattagcttgttggtagggtaatggcctacc--aaggcaacgatccgtagctggtctgagaggatgatcagccacactgggactgagacacggcccagactcctacggg-aggcagcagtg--gggaa-tattggacaatgggcgaaagcctgatccagcaatgccgcgtgtgtgaagaaggcctttgggttgtaaagcacttttagtggggaagaaaggccagcgg-ttaatacccgc-cggt-tttgacgttacccaaagaaaaagcaccggctaactccgtgccagcagccgcggtaatacggagggtgcgagcgttaatcggaattactgggcgtaaagggc-gcgtaggtggcttgataagtcgggtgtgaaagccccgggctcaacctgggaattgcattcgatactgttaagct-agagtacaatagaggggagcggaatt-cccggtgtagcggtgaaatgcgtagatatcgggaggaacatcagtggcgaagg--cggcttcctggattgatactgacactgaggcgcgaaagcgtgggg-agcaaacaggattagataccctggtagtccacgccctaaacgatgagaactagccgttgggagtatt-------g-aaacttttggtggcgtagctaacgcgataagtt-ctccgcctggggagtacggccgc-aaggttaaaactcaaa-ggaattgac-gggggcccgcacaagcggtggagcatgtggtttaattcgatgcaacgcgaagaaccttacctgcttttgac-atcctcggaatcctgcggaaacgtgggagtgccttcgggagccg-agtgacaggtgctgcatggc-tgt-cgtcagctcgtgtcgtg--agatgttgggttaagtc-ccgtaacgagcgcaacccctgtccctagttgccagcg-gtttg-gccgggaactctagggagactgccggtgataaaccggaggaaggtggggatgacgtcaagtcatcatggcctttataagcagggctacacacgtgctacaatggccggtacagagagtcgcgagtt--cgtgagaaggagctaatctcagaaagccggtcgtagtccggatcggagtctgcaactcgactccgtgaagtcggaatcgctagtaatcgcggatcagaa-cgccgcggtgaatacgttcccgggccttg-tacacaccgcccgtcacaccatgggagtgggttgcaccagaagtaggttgcttaactttc------gagagggcgctt-accacggtgtggttcatgactggggtgaagtcgtaacaaggtagccgtaggggaacctgcggctggatcacctccttt- 'Symbiont_of_Kentrophoros_FW_BZ106' ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------gtgaagaaggccttcgggttgtaaagcactttcagtaaggaagaaaggtccgtgg-ttaatacctgc-ggat-tttgacgttacttagagaagaagcaccggctaactccgtgccagcagccgcggtaatacggagggtgcgagcgttaatcggaattactgggcgtaaagggc-gcgtaggtggtttagtaagtcggatgtgaaagccccgggcttaacctgggaactgcgttcgatactgctgagct-agagtacggtagagggaagcggaatt-cccggtgtagcggtgaaatgcgtagatatcgggaggaacatcagtggcgaagg--cggcttcctggactgatactgacactgaggcgcgaaagcgtgggg-agcaaacaggattagataccctggtagtccacgccctaaacgatgagaactagccgttgggagtatt-------g-aagcttttggtggcgtagctaacgcgataagtt-ctccgcctggggagtacggccgc-aaggttaaaactcaaa-ggaattgac-gggggcccgcacaagcggtggagcatgtggtttaattcgatgcaacgcgaagaaccttacctgcttttgac-atcctcggaa----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 'Symbiont_of_Kentrophoros_FW_BZ131' -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------atgccgcgtgtgtgaagaaggccttcgggttgtaaagcactttcagtaaggaagaaaggtccgagg-ttaatacccgc-ggat-tttgacgttacttagagaagaagcaccggctaactccgtgccagcagccgcggtaatacggagggtgcgagcgttaatcggaattactgggcgtaaagggc-gcgtaggtggtttagtaagtcggatgtgaaagccctgggcttaacctgggaactgcgttcgatactgctgagct-agagtacggtagagggaagcggaatt-cccggtgtagcggtgaaatgcgtagatatcgggaggaacatcagtggcgaagg--cggcttcctggactgatactgacactgaggcgcgaaagcgtgggg-agcaaacaggattagataccctggtagtccacgccctaaacgatgagaactagccgttgggagtatt-------g-aagcttttggtggcgtagctaacgcgataagtt-ctccgcctggggagtacggccgc-aaggttaaaactcaaa-ggaattgac-gggggcccgcacaagcggtggagcatgtggtttaattcgatgcaacgcgaagaaccttacctgcttttgac-catc----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 'Symbiont_of_Kentrophoros_BT_S243' -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------tacgtcggattagcttgttggtagggtaatggcctacc--aaggcgacgatccgtagctggtctgagaggatgatcagccacactgggactgagacacggcccagactcctacggg-aggcagcagtg--gggaa-tattggacaatgggcgaaagcctgatccagcaatgccgcgtgtgtgaagaaggccttcgggttgtaaagcactttcaatagggaagaaatgcctgagg-ttaatacccgc-aggt-tttgacgttacctaaagaagaagcaccggctaactccgtgccagcagccgcggtaatacggagggtgcaagcgttaatcggaattactgggcgtaaagggc-gcgtaggtggtttggtaagtcggatgtgaaagccctgggcttaacctaggaattgcatttgatactgccagact-agagtacggtagagggaagtggaatt-cccggtgtagcggtgaaatgcgtagatatcgggaggaacatcagtggcgaagg--cggcttcctggattgatactgacactgaggcgcgaaagcgtgggg-agcaaacaggattagataccctggtagtccacgccctaaacgatgagaactagccgttgggagcatt-------g-aagcttttagtggcgaagctaacgcgataagtt-ctccgcctggggagtacggccgc-aaggttaaaactcaaa-ggaattgac-gggggcccgcacaagcggtggagcatgtggtttaattcgatgcaacgcgaagaaccttacctgcttttgac-atcctcggaatcccacggaaacgtgggagtgccttcgggagccg-agtg-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 'Symbiont_of_Kentrophoros_FM_BZ176' --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------gcaatgccgcgtgtgtgaagaaggccttcgggttgtaaagcactttcagtggggaagaaaagcccgagg-ttaataccctc-gggt-tctgacgttacccacagaagaagcaccggctaactccgtgccagcagccgcggtaatacggagggtgcgagcgttaatcggaattactgggcgtaaagggc-gcgtaggtggtttgataagtcggatgtgaaagccccgggcttaacccgggaattgcattcgatactgtcagact-agagtacagtagagggaggcggaatt-cccggtgtagcggtgaaatgcgtagatatcgggaggaacatcagtggcgaagg--cggcttcctggactgatactgacactgaggcgcgaaagcgtgggg-agcaaacaggattagataccctggtagtccacgccctaaacgatgagaactagccgttggaggcatt-------a-aagcctttagtggcgtagctaacgcgataagtt-ctccgcctggggagtacggccgc-aaggttaaaactcaaa-ggaattgac-gggggcccgcacaagcggtggagcatgtggtttaattcgatgcaacgcgaagaaccttacctgctt--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 'Symbiont_of_Kentrophoros_G_BZ185' ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------tgtgaagaaggccttcgggttgtaaagcactttcagtggggaagaaaagcccgagg-ttaataccctc-gggt-tctgacgttacccacagaagaagcaccggctaactccgtgccagcagccgcggtaatacggagggtgcgagcgttaatcggaattactgggcgtaaagggc-gcgtaggtggtttgataagtcggatgtgaaagccccgggcttaacccgggaattgcattcgatactgtcagact-agagtacagtagagggaggcggaatt-cccggtgtagcggtgaaatgcgtagatatcgggaggaacatcagtggcgaagg--cggcttcctggactgatactgacactgaggcgcgaaagcgtgggg-agcaaacaggattagataccctggtagtccacgccctaaacgatgagaactagccgttggaggcatt-------a-aagcctttagtggcgtagctaacgcgataagtt-ctccgcctggggagtacggccgc-aaggttaaaactcaaa-ggaattgac-gggggcccgcacaagcggtggagcatgtggtttaattcgatgcaacgcgaagaaccttacctgcttttgaccatcctc--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 'Symbiont_of_Kentrophoros_H_SA2B15' ----ctgaagagtttga-tcctggctcagattgaa-cgctggcggcatgcttaac-acatgc-aagtcgaacggtaacgggg-----------------------ggaa--------------------------------------------------------------------gcttgctt-------ccttgccgacgagtggcggacgggtgagtaatgcgtaggaatctacctagc-agtgggggataacccagggaaacccgggctaataccgcatgcgattttccatttaactaaaatagtggggaatgaaaga-----ggggc--------tta------t--gcctcatcgctgttg-gatgagcctacgtcggattagctagttggtagggtaacggcctacc--aaggcggcgatccgtagctggtctgagaggatgatcagccacactgggactgagacacggcccagactcctacggg-aggcagcagtg--gggaa-tattggacaatgggcgaaagcctgatccagcaatgccgcgtgtgtgaagaaggccttcgggttgtaaagcactttcagtggggaagaaaagccaaggg-ttaatatcctt-tggc-cttgacgttacccacaaaagaagcaccggctaactccgtgccagcagccgcggtaatacggagggtgcaagcgttaatcggaattactgggcgtaaagggc-gcgtaggtggtttggtaagtcggatgtgaaatccccgggcttaacctgggaattgcatttgatactgtcagact-agagtacggtagagggaggtggaatt-cccggtgtagcggtgaaatgcgtagatatcggggggaacatcagtggcgaagg--cggcctcctggactgatactgacactgaggcgcgaaagcgtgggg-agcaaacaggattagataccctggtagtccacgccctaaacgatgagaactagccgttgggggcatt-------a-aagcctttagtggcgtagctaacgcgataagtt-ctccgcctggggagtacggccgc-aaggttaaaactcaaa-ggaattgac-gggggcccgcacaagcggtggagcatgtggtttaattcgatgcaacgcgaagaaccttacctgcttttgac-atcctcgggatcctgtagagatgcaggagtgccttcgggaactg-agtgacaggtgctgcatggc-tgt-cgtcagctcgtgtcgtg--agatgttgggttaagtc-ccgtaacgagcgcaacccttgtccctagttgccaacg-gttcg-gccgggaactctagggagactgccggtgataaaccggaggaaggtggggatgacgtcaagtcatcatggcccttatgggcagggctacacacgtgctacaatggccggtacagagggctgcgagcc--cgtgagggggagctaatcccagaaaaccggttgtagtccggatcggagtctgcaactcgactccgtgaagttggaatcgctagtaatcgcggatcagca-tgccgcggtgaatacgttcccgggccttg-tacacaccgcccgtcacaccatgggagtgggctgcaccagaagtgagctgcttaacctcc------gggagggcgctt-accacggtgtggttcatgactggggtgaagtcgtaacaaggtagccgtaggggaacctgtggctggatcacctccttt- 'Symbiont_of_Kentrophoros_FB_S136' ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------gacgggtgagtaatgcgtaggaatctgcccgat-tgtgggggacaacccggggaaacccgggctaataccgcatgcgatcttccaccta--------tgtgggggatgaaagg-----gggg---------ctt------c--ggcctctcgctgtcg-gatgagcctacgtcggattagcttgttggtggggtaatggcctacc--aaggcgacgatccgtagctggtctgagaggatgatcagccacactgggactgagacacggcccagactcctacggg-aggcagcagtg--gggaa-tattggacaatgggcgaaagcctgatccagcaatgccgcgtgtgtgaagaaggccttcgggttgtaaagcactttcagtggggaagaaagatccaagg-ttaataccctc-gggt-tctgacgttacccacagaagaagcaccggctaactccgtgccagcagccgcggtaatacggagggtgcgagcgttaatcggaattactgggcgtaaagggc-gcgtaggtggttcggtaagtcggatgtgaaagccccgggctcaacctgggaattgcattcgatactgccgagct-agagtacggtagagggaggcggaatt-cccggtgtagcggtgaaatgcgtagatatcgggaggaacatcagtggcgaagg--cggcctcctggactgatactgacactgaggcgcgaaagcgtgggg-agcaaacaggattagataccctggtagtccacgccctaaacgatgagaactagccgttgggggtatt-------t-aagcccttagtggcgaagctaacgcgataagtt-ctccgcctggggagtacggccgc-aaggttaaaactcaaa-ggaattgac-gggggcccgcacaagcggtggagcatgtggtttaattcgatgcaacgcgaagaaccttacctgcttttgac-atcctcggaatcctgcagagatgcaggagtgccttcgggaaccg-agtgacaggt-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 'Symbiont_of_Kentrophoros_FBG_S435' -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------cctcgcgctattg-gatgagcctacgtcggattagctagttggtagggtaatggcctWcctaaRRMagaMgatccgtagctggtctgagaggatgatcagccacactgKKactgagacacggcccagactcctacggg-aggcagcagtg--gggaa-tattggacaatgggcgaaagcctgatccagcaatgccgcgtgtgtgaagaaggccttcgggttgtaaagcactttcaatggggaagaaaagctccggg-tcaataccccg-gagt-cttgacgttacctggagaagaagcaccggctaactccgtgccagcagccgcggtaatacggagggtgcgagcgttaatcggaattactgggcgtaaagggc-gcgtaggtggttgtgtaagtcggatgtgaaatccccgggcttaacttgggaactgcattcgatactgctcagct-agagtacggtagaggaaagcggaatt-cccggtgtagcggtgaaatgcgtagatatcgggaggaacaccagtggcgaagg--cggctttctgggccgatactgacactgaggcgcgaaagcgtgggg-agcaaacaggattagataccctggtagtccacgccctaaacgatgagaactagccgttgggggcatt-------t-aagccctttgtggcgtagctaacgcgataagtt-ctccgcctggggagtacgaccgc-aaggttaaaactcaaa-ggaattgac-gggggcccgcacaagcggtggagcatgtggtttaattcgatgcaacgcgaagaaccttacctgcccttgac-atcctcggaacttgccagagatggcgaggcgccttcgggaaccg-agagacaggtgctgcatggc-tgt-cgtcagctcgtgtcgtg--agatgttgggttaagtc-ccgtaacgagcgcaacccttgtccttagttaccagcg-gttcg-g------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 'JQ800923.1.1507_uncultivated_environmental_bacteria' --------agagtttga-tcctggctcagattgaa-cgctggcggcatgcttaac-acatgc-aagtcgaacggcagcgcgg-----------------------ggag----------------------------------------------------------------------cttgct-------ccctggcggcgagtggcggacgggtgagtaatacgtaggaatctgcccagt-agtgggggacaacccggggaaacccgggctaataccgcatacgccctac-----------------gggggaaagcggg-----ggatct-------ttt------a--gacctcgcgctattg-gatgagcctacgtccgattagcttgttggtgaggtaaaagctcacc--aaggcgacgatcggtagctggtctgagaggacgatcagccacactgggactgagacacggcccagactcctacggg-aggcagcagtg--gggaa-tattggacaatgggcgaaagcctgatccagcaatgccgcgtgtgtgaagaaggccctagggttgtaaagcactttcagtggggaagaaaagcagggtg-ttaataccacc-ctgt-gctgacgtaacccacagaagaagcaccggctaactccgtgccagcagccgcggtaatacggagggtgcgagcgttaatcggaattactgggcgtaaagggc-gcgtaggtggtttgataagtcggatgtgaaagccccgggcttaacttgggaattgcattcgatactgtcaggct-agagtgtggtagaggaaagcggaatt-cccggtgtagcggtgaaatgcgtagatatcgggaggaacatcagtggcgaagg--cggctttctggaccaacactgacactgaggcgcgaaagcgtgggg-agcaaacaggattagataccctggtagtccacgccctaaacgatgagaactagccgttgggggtatt-------tgaaaccctttgtggcgcagctaacgcgataagtt-ctccgcctggggagtacggccgc-aaggttaaaactcaaa-ggaattgac-gggggcccgcacaagcggtggagcatgtggtttaattcgatgcaacgcgaagaaccttacctgcttttgac-atcctcggaatcccgcagagatgcgggagtgccttcgggaaccg-agtgacaggtgctgcatggc-tgt-cgtcagctcgtgtcgtg--agatgttgggttaagtc-ccgtaacgagcgcaacccttgtccctagttgccagca-cttcg-ggtgggaactctagggagactgccggtgacaaaccggaggaaggtggggatgacgtcaagtcatcatggcccttatgggcagggctacacacgtgctacaatggtcggtacaaagggttgccaagc--agcaatgcggagctaatcccataaaaccggtcgtagtccggatcgaagtctgcaactcgacttcgtgaagtcggaatcgctagtaatcgcggatcagaa-cgccgcggtgaatacgttcccgggccttg-tacacaccgcccgtcacatcacgaaagtggattgtactagaaatccgtggcctaaccttc------gggggggagcgg-ctgaaggtatgatccatgattggggtgaagtcgtaacaaggtaaccgta------------------------------ 'EU652572.1.1506_uncultivated_environmental_bacteria' --------agagtttga-tcctggctcagattgaa-cgctggcggcatgcttaac-acatgc-aagtcgaacggcagcgcgg-----------------------ggag----------------------------------------------------------------------cttgct-------ccctggcggcgagtggcggacgggtgagtaatacgtaggaatctgcccagt-agtgggggacaacccggggaaacccgggctaataccgcatacgccctac-----------------gggggaaagcggg-----ggatc--------ttc------g--gacctcacgctattg-gatgagcctacgtccgattagcttgttggtgaggtaaaagctcacc--aaggcgacgatcggtagctggtctgagaggacgatcagccacactgggactgagacacggcccagactcctacggg-aggcagcagtg--gggaa-tattggacaatgggcgaaagcctgatccagcaatgccgcgtgtgtgaagaaggccctagggttgtaaagcactttcagtggggaagaaaagcagggtg-ttaataccacc-ctgt-gctgacgtaacccacagaagaagcaccggctaactccgtgccagcagccgcggtaatacggagggtgcaagcgttaatcggaattactgggcgtaaagggc-gcgtaggtggtctgataagtcggatgtgaaagccccgggcttaacttgggaattgcattcgatactgtcaggct-ggagtgtggtagaggaaagcggaatt-cccggtgtagcggtgaaatgcgtagatatcgggaggaacatcagtggcgaagg--cggctttctggaccaacactgacactgaggcgcgaaagcgtgggg-agcaaacaggattagataccctggtagtccacgccctaaacgatgagaactagccgttgggggtatt-------tgaaaccctttgtggcgcagctaacgcgataagtt-ctccgcctggggagtacggccgc-aaggttaaaactcaaa-ggaattgac-gggggcccgcacaagcggtggagcatgtggtttaattcgatgcaacgcgaagaaccttacctgcttttgac-atcctcggaatcccgcagagatgcgggagtgccttcgggaaccg-agtgacaggtgctgcatggc-tgt-cgtcagctcgtgtcgtggaaRatgttgggYtaagtcgccgtaacgagcgcaacccttgtccctagttgccagca-cttcg-ggtgggaactctagggagactgccggtgacaaaccggaggaaggtggggatgacgtcaagtcatcatggcccttatgggcagggctacacacgtgctacaatgggcggtacaaagggtcgccaaag--cgcgagctggagctaatcccaaaaaaccgtcctcagttcggattgcagtctgcaactcgactgcatgaagttggaatcgctagtaatcccggatcagca-tgccggggtgaatacgttcccgggccttg-tacacaccgcccgtcacatcacgaaagtcggctgtaccggaagccggtgggctaaccctc------gggaggcaactg-tccatggtatggtcggcgattggggtgaagtcgtaacaaggtaacc--------------------------------- 'JQ800972.1.1506_uncultivated_environmental_bacteria' --------agagtttga-tcctggctcagattgaa-cgctggcggcatgcttaac-acatgc-aagtcgaacggcagcgcgg-----------------------ggag----------------------------------------------------------------------cttgct-------ccctggcggcgagtggcggacgggtgagtaatacgtaggaatctgcccagt-agtgggggacaacccggggaaacccgggctaataccgcatacgccctac-----------------gggggaaagcggg-----ggatc--------ttc------g--gacctcgcgctattg-gatgagcctacgtccgattagcttgttggtgaggtaaaggctcacc--aaggcgacgatcggtagctggtctgagaggacgatcagccacactgggactgagacacggcccagactcctacggg-aggcagcagtg--gggaa-tattggacaatgggcgaaagcctgatccagcaatgccgcgtgtgtgaagaaggccctagggttgtaaagcactttcagtgaggaagaaaagcaggggg-ttaatacctcc-ctgt-gctgacgttactcacagaagaagcaccggctaactccgtgccagcagccgcggtaatacggagggtgcgagcgttaatcggaattactgggcgtaaagggc-gcgtaggtggtctgataagtcgggtgtgaaagccccgggcttaacttgggaattgcattcgatactgtcaggct-ggagtgtggtagaggaaagcggaatt-cccggtgtagcggtgaaatgcgtagatatcgggaggaacatcagtggcgaagg--cggctttctggaccaacactgacactgaggcgcgaaagcgtgggg-agcaaacaggattagataccctggtagtccacgccctaaacgatgagaactagccgttgggggtatt-------ttaaaccctttgtggcgaagctaacgcgataagtt-ctccgcctggggagtacggccgc-aaggttaaaactcaaa-ggaattgac-gggggcccgcacaagcggtggagcatgtggtttaattcgatgcaacgcgaagaaccttacctgcttttgac-atcctcggaatcccgcagagatgcgggagtgccttcgggaaccg-agtgacaggtgctgcatggc-tgt-cgtcagctcgtgtcgtg--agatgttgggttaagtc-ccgtaacgagcgcaacccttgtccctagttgccagca-cttcg-ggtgggaactctagggagactgccggtgacaaaccggaggaaggtggggatgacgtcaagtcatcatggcccttatgggcagggctacacacgtgctacaatggtcggtacaaagggttgccaagc--agcaatgcggagctaatcccataaaaccgatcgtagtccggatcgaagtctgcaactcgacttcgtgaagtcggaatcgctagtaatcgcggatcagaa-cgccgcggtgaatacgttcccgggccttg-tacacaccgcccgtcacaccatgggagtgggctgcaccagaagtaggtggcttaaccttc------gggagagcgctt-accacggtgtggttcatgactggggtgaagtcgtaacaaggtaaccgta------------------------------ 'JX504483.1.1538_uncultivated_environmental_bacteria' --------agagtttga-tcctggctcagattgaa-cgctggcggcatgcttaac-acatgc-aagtcgaacggcagcgcgg-----------------------ggag----------------------------------------------------------------------cttgct-------ccctggcggcgagtggcggacgggtgagtaatacgtaggaatctgcccagt-agtgggggacaacccggggaaacccgggctaataccgcatacgccctac-----------------gggggaaagcggg-----ggatct-------ttt------a--gacctcgcgctattg-gatgagcctacgtccgattagcttgttggtgaggtaaaggctcacc--aaggcgacgatcggtagctggtctgagaggacgatcagccacactgggactgagacacggcccagactcctacggg-aggcagcagtg--gggaa-tattggacaatgggcgaaagcctgatccagcaatgccgcgtgtgtgaagaaggccctagggttgtaaagcactttcagtagggaagaaaagcagggtg-ttaataccacc-ctgt-gctgacgttacctacagaagaagcaccggctaactccgtgccagcagccgcggtaatacggagggtgcaagcgttaatcggaattactgggcgtaaagggc-gcgtaggtggtctgataagtcggatgtgaaagccccgggcttaacttgggaattgcattcgatactgtcgggct-ggagtgtggtagaggaaagcggaatt-cccggtgtagcggtgaaatgcgtagatatcgggaggaacaccagtgacgaaaggcggcttttctggaccaacactgacactgaggcgcgaaagcgtgggg-agcaaacaggattagataccctggtagtccacgccctaaacgatgagaactagccgttgggggtatt-------tgaaaccctttgtggcgcagctaacgcgataagtt-ctccgcctggggagtacggccgc-aaggttaaaactcaaa-ggaattgac-gggggcccgcacaagcggtggagcatgtggtttaattcgatgcaacgcgaagaaccttacctgcttttgac-atcctcggaatcccgcagagatgcgggagtgccttcgggaaccg-agtgacaggtgctgcatggc-tgt-cgtcagctcgtgtcgtg--agatgttgggttaagtc-ccgtaacgagcgcaacccttgtccctagttgccagca-cttcg-ggtgggaactctagggagactgccggtgacaaaccggaggaaggtggggatgacgtcaagtcatcatggcccttatgggcagggctacacacgtgctacaatggtcggtacaaagggttgccaagc--agtaatgcggagctaatcccacaaaaccggtcgtagtccggatcgaggtctgcaactcgacttcgtgaagtcggaatcgctagtaatcgcggatcagaa-cgccgcggtgaatacgttcccgggccttg-tacacaccgcccgtcacaccatgggagtgggctgcaccagaagtgagtggcttaaccttc------gggagagcgctt-accacggtgtggttcatgactggggtgaagtcgtaacaaggtagccgtaggggaacctgcggctggatcacctcctta- 'DQ513032.1.1504_uncultivated_environmental_bacteria' --------agggtttga-tcctggctcaggttgaa-cgctggcggcatgcttaac-acatgc-aagtcgaacggcagcgcgg-----------------------ggag----------------------------------------------------------------------cttgct-------ccctggcggcgagtggcggacgggtgagtaacgcgtgggaatctgcccagt-agtgggggacaacccgaggaaactcgggctaataccgcatacgccctac-----------------gggggaaagcagg-----ggatc--------ttc------g--gaccttgcgctattg-gatgagcccgcgtcggattagcttgttggtggggtaacggctcacc--aaggcgacgatccgtagctggtctgagaggacgatcagccacactgggactgagacacggcccagactcctacggg-aggcagcagtg--gggaa-tattggacaatgggcgaaagcctgatccggcaatgccgcgtgtgtgaagaaggccttagggttgtaaagcactttcagttgggaagaaacgcagggtg-ctaataccacc-ctgt-aatgacgttaccaacacaagaagcaccggctaactccgtgccagcagccgcggtaatacggagggtgcaagcgttaatcggaattactgggcgtaaagggc-gcgtaggtggtctgataagtcgggtgtgaaagccccgggcttaacttgggaattgcattcgatactgtcagact-agagtgtggtagagggaagcggaatt-cccggtgtagcggtgaaatgcgtagatatcgggaggaacaccagtggcgaagg--cggcttcctggaccaacactgacactgaggcgcgaaagcgtgggg-agcaaacaggattagataccctggtagtccacgccctaaacgatgagaactagccatagggggtatt-------tgaaaccttttgtggcgaagctaacgcgataagtt-ctccgcctggggagtacggccgc-aaggttaaaactcaaa-ggaattgac-gggggcccgcacaagcggtggagcatgtggtttaattcgatgcaacgcgaagaaccttacctgcttttgac-atcctcggaatcccgcagagatgcgggagtgccttcgggaaccg-agtgacaggtgctgcatggc-tgt-cgtcagctcgtgtcgtg--agatgttgggttaagtc-ccgtaacgagcgcaacccttgtccctagttgccagca-cttcg-ggtgggaactctagggagactgccggtgacaaaccggaggaaggtggggatgacgtcaagtcatcatggccctcatgggcagggctacacacgtgctacaatggccggtacagagggttgccaacc--tgcaaaggggagctaatccctcaaaaccggtcgtagtccggatcgaagtctgcaactcgacttcgtgaagtcggaatcgctagtaatcgcggatcagaa-cgccgcggtgaatacgttcccgggccttg-tacacaccgcccgtcacaccatgggagtgggctgcaccagaagtaggtagcttaaccttc------gggagggcgctt-accacggtgtggttcatgactggggtgaagtcgtaacaaggtagccg-------------------------------- 'HE817831.1.1534_uncultivated_environmental_bacteria' --------agagtttga-ttctggctcagattgaa-cgctggcggcatgcttaac-acatgc-aagtcgaacggcagcgcgg-----------------------ggag----------------------------------------------------------------------cttgct-------ccctggcggcgagt-gcggacgggtgagtaacgcgtgggaatctgcccggt-agtgggggacaacccgaggaaactcgggctaataccgcatacgccctac-----------------gggggaaagcggg-----ggatc--------ttc------g--gacctcgcgctattg-gatgagcccgcgtcggattagcttgttggtggggtaatggctcacc--aaggcaacgatccgtagctggtctgagaggacgatcagccacactgggactgagacacggcccagactcctacggg-aggcagcagtg--gggaa-tattggacaatgggcgaaagcctgatccagcaatgccgcgtgtgtgaagaaggccttcgggttgtaaagcactttcagtggggaagaaaagcaggggg-ccaatacccct-ctgt-gctgacgttacccacagaagaagcaccggctaactccgtgccagcagccgcggtaatacggagggtgcgagcgttaatcagaattactgggcgtaaagggc-gagtaggtggtacggtcagtcgggtgtgaaagccccgggctcaacctgggaattgcattcgatactgccgagct-ggagtgtggtagagggaagcggaatt-ccgggtgtagcggtgaaatgcgtagatatccggaggaacaccagtggcgaagg--cggcttcctggaccaacactgacactgagtcgcgaaagcgtgggg-agcaaacaggattagataccctggtagtccacgccctaaacgatgagaactagccgttgggggtatt-------agaaacctttagtggcgcagctaacgcgataagtt-ctccgcctggggagtacggccgc-aaggttaaaactcaaa-ggaattgac-gggggcccgcacaagcggtggagtatgtggtttaattcgatgcaacgcgaagaaccttacctgcccttgac-atgctcggaacttggcagagatgccttggtgccctcgggaaccg-agacacaggtgctgcatggc-tgt-cgtcagctcgtgtcgtg--agatgttgggttaagtc-ccgtaacgagcgcaacccttgtccttagttgccagcg-attcg-gtcgggaactctaaggagactgccggtgacaaaccggaggaaggtggggatgacgtcaagtcctcatggcccttatgggcagggctacacacgtactacaatggccggtacagagggtcgccaacc--cgcgagggggagccaatcccacaaaaccggtcgtagtccggatcggagtctgcaactcgactccgtgaagtcggaatcgctagtaatcgcggatcagga-cgccgcggtgaatacgttcccgggccttg-tacacaccgcccgtcacaccatgggagtgggctgcaaaagaagtaggtagcttaaccttc------gggagggcgctt-accactttgtggttcatgactggggtgaagtcgtaacaaggtagccgtaggggaacctgcggctggatcacctccttt- 'JQ347371.1.1498_uncultivated_environmental_bacteria' ---------gagtttga-ttctggctcagattgaa-cgctggcggcatgcttaac-acatgc-aagtcgaacggtaacagcg-----------------------ggag----------------------------------------------------------------------cttgct-------cccggctgacgagtggcggacgggtgcgtaacgcgtgggaatctgcctagt-agtgggggataactccgggaaaccggggctaataccgcatacaccctac-----------------ggggaaaagcggg-----ggatc--------ttc------g--gacctcgcgctatta-gatgagcccgcgtccgattagcttgttggtggggtaaaggctcacc--aaggcgacgatcggtagctggtctgagaggacgatcagccacactgggactgagacacggcccagactcctacggg-aggcagcagtg--gggaa-tattggacaatgggcgcaagcctgatccagcaatgccgcgtgtgtgaagaaggccttagggttgtaaagcactttcagtggggaagaaaagctagggg-ttaatacctcc-ttgt-gctgacgttacccacagaagaagcaccggctaactccgtgccagcagccgcggtaatacggagggtgcgagcgttaatcggaattactgggcgtaaagggc-gcgtaggtggctagattagtcgggtgtgaaagccccgggcttaactcgggaattgcattcgatactgtctggct-agagtgcagtagagggaagcggaatt-ccgggtgtagcggtgaaatgcgtagatatccggaggaacaccagtggcgaagg--cggcttcctggactgacactgacactgaggcgcgaaagcgtgggg-agcaaacaggattagataccctggtagtccacgccctaaacgatgagaactagccgttgggggtgtt-------agaaacctttagtggcgcagctaacgcgataagtt-ctccgcctggggagtacggccgc-aaggttaaaactcaaa-ggaattgac-gggggcccgcacaagcggtggagcatgtggtttaattcgatgcaacgcgaagaaccttacctgcccttgac-attgacggaacccgctagagatagcggggtgccttcggg-cctg-gaaaacaggtgctgcatggc-tgt-cgtcagctcgtgtcgtg--agatgttgggttaagtc-ccgtaacgagcgcaacccttgtccttagttgccagca-ctccg-ggtgggaactctaaggagactgccggtgacaaaccggaggaaggtggggatgacgtcaagtcatcatggcccttatgggcagggctacacacgtgctacaatggtcggtacagagggtagccaacc--agcaatggggagccaatcccagaaaaccggtcgtagtccggatcggagtctgcaactcgactccgtgaagtcggaatcgctagtaatcgcagatcagaa-tgctgcggtgaatacgttcccgggccttg-tacacaccgcccgtcacaccatgggagtgggctgcaaaagaagtaggtagcttaaccttc------gggagagcgctt-accactttgtggttcatgactggggtgaagtcgtaacaaggta------------------------------------ 'JN977228.1.1533_uncultivated_environmental_bacteria' --------agagtttga-tcctggctcagattgaa-cgctggcggcatgcttaac-acatgc-aagtcgaacggcagcgcgg-----------------------ggag----------------------------------------------------------------------cttgct-------ccctggcggcgagtggcggacgggtgagtaacgcgtgggaatctgcccagt-agtgggggacaacccgaggaaactcgggctaataccgcatacgccctac-----------------gggggaaagcagg-----ggatc--------ttc------g--gaccttgcgctactg-gatgagcccgcgtcggattagcttgttggtggggtaacggctcacc--aaggcgacgatccgtagctggtctgagaggacgatcagccacactgggactgagacacggcccagactcctacggg-aggcagcagtg--gggaa-tattggacaatgggcgcaagcctgatccagcaatgccgcgtgtgtgaagaaggccctagggttgtaaagcactttcagttgggaagaaacgcagaggg-ttaatacccct-ctgt-aatgacgttaccgacacaagaagcaccggctaactccgtgccagcagccgcggtaatacggagggtgcgagcgttaatcggaattactgggcgtaaagggc-gcgtaggtggctctgtaagtcgggtgtgaaagccccgggctcaacccgggaattgcattcgatactgcagggct-agagtatggtagaggaaagcggaatt-cccggtgtagcggtgaaatgcgtagatatcgggaggaacaccagtggcgaagg--cggctttctggaccaatactgacactgaggcgcgaaagcgtgggg-agcaaacaggattagataccctggtagtccacgccctaaacgatgagaactagccgttgggggtatt-------t-aaacccttcgtggcgcagctaacgcgataagtt-ctccgcctggggagtacggccgc-aaggttaaaactcaaa-ggaattgac-gggggcccgcacaagcggtggagcatgtggtttaattcgatgcaacgcgaagaaccttacctgcccttgac-atcctcggaacttgtcagagatgacttggtgccttcgggaaccg-agagacaggtgctgcatggc-tgt-cgtcagctcgtgtcgtg--agatgttgggttaagtc-ccgtaacgagcgcaacccttgtccctagttgccagcg-attcg-gtcgggaactctagggagactgccggtgacaaaccggaggaaggtggggatgacgtcaagtcatcatggcccttatgggcagggctacacacgtgctacaatggccggtacaaagggttgccaacc--cgcgagggggagctaatcccataaaaccggtcgtagtccggatcggagtctgcaactcgactccgtgaagtcggaatcgctagtaatcgcagatcagca-tgctgcggtgaatacgttcccgggccttg-tacacaccgcccgtcacaccatgggagtgggctgcaccagaagtaggttgcttaaccttc------gggagagcgctt-accacggtgtggttcatgactggggtgaagtcgtaacaaggtagccgtaggggaacctgcggctggatcacctcctt-- 'AB694061.1.1406_uncultivated_environmental_bacteria' -----------------------------------------------------------tgc--agtcgaacggcagcgcgg-----------------------ggag----------------------------------------------------------------------cttgct-------ccctggcggcgagtggcggacgggtgagtaacgcgtgggaatctgcccagt-agtgggggacaacccgaggaaactcgggctaataccgcatacgccctac-----------------gggggaaagcagg-----ggatc--------ttc------g--gaccttgcgctattg-gatgagcccgcgtcggattagcttgttggtagggtaacggcctacc--aaggcgacgatccgtagctggtctgagaggacgatcagccacactgggactgagacacggcccagactcctacggg-aggcagcagtg--gggaa-tattggacaatgggcgcaagcctgatccagcaatgccgcgtgtgtgaagaaggccctagggttgtaaagcactttcagttgggaagaaacgcagagcg-ttaataccgct-ctgt-aatgacgttaccaacacaagaagcaccggctaactccgtgccagcagccgcggtaatacggagggtgcgagcgttaatcggaattactgggcgtaaagggc-gcgtaggcggctctgtaagtcgggtgtgaaagccccgggctcaacccgggaactgcattcgatactgcagggct-agagtatggtagaggaaagcggaatt-cccggtgtagcggtgaaatgcgtagatatcgggaggaacaccagtggcgaagg--cggctttctggaccaatactgacgctgaggcgcgaaagcgtgggg-agcaaacaggattagataccctggtagtccacgccctaaacgatgagaactagccgttgggggtatt-------t-aaaccctttgtggcgcagctaacgcgataagtt-ctccgcctggggagtacggccgc-aaggttaaaactcaaa-ggaattgac-gggggcccgcacaagcggtggagcatgtggtttaattcgatgcaacgcgaagaaccttacctgcccttgac-atcctcggaacttgtcagagatgacttggtgccttcgggaaccg-agtgacaggtgctgcatggc-tgt-cgtcagctcgtgtcgtg--agatgttgggttaagtc-ccgtaacgagcgcaacccttgtccctagttgccagcg-attcg-gtcgggaactctagggagactgccggtgacaaaccggaggaaggtggggatgacgtcaagtcatcatggcccttatgggcagggctacacacgtgctacaatggccggtacaaagggtcgccaacc--cgcgagggggagccaatcccacaaaaccggtcgtagtccggatcggagtctgcaactcgactccgtgaagtcggaatcgctagtaatcgcagatcagaa-tgctgcggtgaatacgttcccgggccttg-tacacaccgcccgtcacaccatgggagtgggctgcaccagaagtaggttgcttaaccttc------gggagagcgct--------------------------------------------------------------------------------- 'JF809744.1.1399_uncultivated_environmental_bacteria' --------agagtttga-tcatggctcagattgaa-cgctggcggcatgcttaac-acatgc-aagtcgaacggcagcgcgg-----------------------ggag----------------------------------------------------------------------cttgct-------ccctggcggcgagtggcggacgggtgagtaacgcgtgggaatctgcccagt-agtgggggacaacccgaggaaactcgggctaataccgcatacgccctac-----------------gggggaaagcagg-----ggatc--------ttc------g--gaccttgcgctattg-gatgagcccgcgtcggattagcttgttggtgaggtaacagctcacc--aaggcgacgatccgtagctggtctgagaggacgatcagccacactgggactgagacacggcccagactcctacggg-aggcagcagtg--gggaa-tattggacaatgggcgcaagcctgatccagcaatgccgcgtgtgtgaagaaggccctagggttgtaaagcactttcagtcgggaagaaacgcagggtg-ttaataccacc-ctgt-aatgacgttaccgacacaagaagcaccggctaactccgtgccagcagccgcggtaatacggagggtgcgagcgttaatcggaattactgggcgtaaagggc-gcgtaggtggttttgtaagtcgggtgtgaaagccccgggcttaacccgggaattgcattcgatactgcagggct-agagtatggtagaggaaagcggaatt-cccggtgtagcggtgaaatgcgtagatatcgggaggaacaccagtggcgaagg--cggctttctggaccaatactgacactgaggcgcgaaagcgtgggg-agcaaacaggattagataccctggtagtccacgccctaaacgatgagaactagccgttgggggtatt-------t-aaacccttcgtggcgcagctaacgcgataagtt-ctccgcctggggagtacggccgc-aaggttaaaactcaaa-ggaattgac-gggggcccgcacaagcggtggagcatgtggtttaattcgatgcaacgcgaagaaccttacctgcctttgac-atcctcggaaccttccagagatggttgggtgccttcgggaaccg-agagacaggtgctgcatggc-tgt-cgtcagctcgtgtcgtg--agatgttgggttaagtc-ccgtaacgagcgcaacccttgtccctagttgccagcg-gttcg-gccgggaactctagggagactgccggtgacaaaccggaggaaggtggggatgacgtcaagtcatcatggcccttatgggcagggctacacacgtgctacaatggccggtacaaagggttgccaacc--cgcaagggggagccaatcccacaaaaccggtcgtagtccggatcggagtctgcaactcgactccgtgaagtcggaatcgctagtaatcgcagatcagca-tgctgcggtgaatacgttcccgggccttg-tacacaccgcccgtc----------------------------------------------------------------------------------------------------------------------------------------------- 'FN553505.1.1500_uncultivated_environmental_bacteria' --------agagtttga-tcctggctcagattgaa-cgctggcggcatgcttaac-acatgc-aagtcgaacggcagcgcgg-----------------------ggag----------------------------------------------------------------------cttgct-------ccctggcggcgagtggcggacgggtgagtaacgcgtgggaatctgcccagt-agcgggggacaacccgaggaaactcgggctaataccgcatacgccctgc-----------------gggggaaagcagg-----ggatc--------ttc------g--gaccttgcactattg-gatgagcctgcgtcggattagcttgttggtgaggtaacggctcacc--aaggcgacgatccgtagctggtctgagaggacgatcagccacactgggactgagacacggcccagactcctacggg-aggcagcagtg--gggaa-tattggacaatgggcgcaagcctgatccagcaatgccgcgtgtgtgaagaaggccctagggttgtaaagcactttcagttgggaagaaacgcagagtg-ttaataccact-ctgt-aatgacgttaccaacacaagaagcaccggctaactccgtgccagcagccgcggtaatacggagggtgcgagcgttaatcggaattactgggcgtaaagggc-gcgtaggtggctgtgtaagtcgggtgtgaaagccccgggctcaacctgggaattgcattcgatactgcagggct-agagtatggtagaggaaagcggaatt-cccggtgtagcggtgaaatgcgtagatatcgggaggaacaccagtggcgaagg--cggctttctggaccaatactgacactgaggcgcgaaagcgtgggg-agcaaacaggattagataccctggtagtccacgccctaaacgatgagaactagccgttgggggtatt-------t-aaacccttcgtggcgaagctaacgcgataagtt-ctccgcctggggagtacggccgc-aaggttaaaactcaaa-ggaattgac-gggggcccgcacaagcggtggagcatgtggtttaattcgatgcaacgcgaagaaccttacctgcccttgac-atcctcggaaccttccagagatggttgggtgccttcgggaaccg-agtgacaggtgctgcatggc-tgt-cgtcagctcgtgtcgtg--agatgttgggttaagtc-ccgtaacgagcgcaacccttgtccctagttgccagcg-gttcg-gccgggaactctagggagactgccggtgacaaaccggaggaaggtggggatgacgtcaagtcatcatggcccttatgggcagggctacacacgtgctacaatggccggtacaaagggctgccaacc--cgcaagggggagccaatcccagaaaaccggtcgtagtccggatcggagtctgcaactcgactccgtgaagtcggaatcgctagtaatcgcagatcagaa-tgctgcggtgaatacgttcccgggccttg-tacacaccgcccgtcacaccatgggagtgggctgcaccagaagtaggttgcttaaccttc------gggagagcgctt-accacggtgtggttcatgactggggtgaagtcgtaacaaggtaa----------------------------------- 'JF344142.1.1499_uncultivated_environmental_bacteria' --------agagtttga-tcatggctcagattgaa-cgctggcggcatgcctaac-acatgc-aagtcgaacggcagcgcgg-----------------------ggag----------------------------------------------------------------------cttgct-------ccctggcggcgagtggcggacgggtgagtaacgcgcaggaatctacccagt-agtgggggacaacccgaggaaactcgggctaataccgcataagccctac-----------------gggggaaagcggg-----ggacc--------ttc------g--ggcctcgcgctattg-gatgagcctacgtcggattagcttgttggtggggtaaaggcctacc--aaggcgacgatccgtagctggtctgagaggacgaccagccacactgggactgagacacggcccagactcctacggg-aggcagcagtg--gggaa-tattggacaatgggggaaaccctgatccagcaatgccgcgtgggtgaagaaggctttcgggttgtaaagccctttcagtggggaagaaaagcggagtg-ataataccact-ctgt-catgacgttacccacagaagaagcaccggctaactccgtgccagcagccgcggtaatacggagggtgcgagcgttaatcggaattactgggcgcaaagggc-gcgtaggtggcctgataagtcggatgtgaaagccccgagcttaacttgggaattgcattcgatactgtcaggct-agagtatggtagaggaaagcggaatt-cccggtgtagcggtgaaatgcgtagatatcgggaggaacaccagtggcgaagg--cggctttctggaccaatactgacactgaggcgcgaaagcgtgggg-agcaaacaggattagataccctggtagtccacgccctaaacgatgagaactagccgttgggggtatt-------t-aaatctctagtggcgcagctaacgcgataagtt-ctccgcctggggagtacggccgc-aaggttaaaactcaaa-ggaattgac-gggggcccgcacaagcggtggagcatgtggtttaattcgatgcaacgcgaagaaccttacctgcctttgac-atcctcggaactttccagagatggattggtgccttcgggaaccg-agtgacaggtgctgcatggc-tgt-cgtcagctcgtgtcgtg--agatgttgggttaagtc-ccgtaacgagcgcaacccttgtccctagttgccagcg-gttcg-gccgggaactctagggagactgccggtgacaaaccggaggaaggtggggatgacgtcaagtcctcatggcccttatgggcagggctacacacgtgctacaatggtaggtacaaagggttgctaacc--cgcgagggggagccaatcccataaaacctgccgtagttcggatcggagtctgcaactcgactccgtgaagtcggaatcgctagtaatcgcggatcagca-cgccgcggtgaatacgttcccgggccttg-tacacaccgcccgtcacaccatgggagtgggctgcaccagaagtaggttgcttaaccttc------gggagggcgctt-accacggtgtggttcatgactggggtgaagtcgtaacaaggta------------------------------------ 'FJ905747.1.1417_uncultivated_environmental_bacteria' -----------------------------------------------------------tgc-aagtcgaacggcagcgcgg-----------------------ggag----------------------------------------------------------------------cttgct-------ccctggcggcgagtggcggacgggtgagtaatacgtaggaatctacccagt-agtgggggacaactcgaggaaactcgagctaataccgcatacgccctac-----------------gggggaaagcggg-----ggacc--------ttc------g--ggcctcgcgctattg-gatgagcctacgtctgattagcttgttggtggggtaatggcctacc--aaggcgacgatcagtagctggtctgagaggacgatcagccacactgggactgagacacggcccagactcctacggg-aggcagcagtg--gggaa-tattggacaatgggcgaaagcctgatccagcaatgccgcgtgtgtgaagaaggccttcgggttgtaaagcactttcagtagggaagaaacaccgggtg-ccaataccacc-cggg-aatgacgttacctacagaagaagcaccggctaactctgtgccagcagccgcggtaatacagagggtgcgagcgttaatcggaattactgggcgtaaagcgc-gcgtaggtggcttggtaagtcggatgtgaaagccccgggctcaacctgggaatgccattcgatactgccaggct-ggagtatggtagagggaagcggaatt-ccgggtgtagcggtgaaatgcgtagatatccggaggaacaccagtggcgaagg--cggcttcctggaccaatactgacactgaggcgcgaaagcgtgggg-agcaaacaggattagataccctggtagtccacgccctaaacgatgagaactagccgttgggggtatt-------g-aaacctttagtggcgcagctaacgcgataagtt-ctccgcctggggagtacggccgc-aaggttaaaactcaaa-ggaattgac-gggggcccgcacaagcggtggagcatgtggtttaattcgatgcaacgcgaagaaccctacctgcctttgac-atccttggaatctcccggaaacgggagagtgccttcgggaaccg-agtgacaggtgctgcatggc-tgt-cgtcagctcgtgtcgtg--agatgttgggttaagtc-ccgtaacgagcgcaacccttgtccctagttgccagcg-gttcg-gccgggaactctagggagactgccggtgacaaaccggaggaaggtggggatgacgtcaagtcctcatggcccttatgggcagggctacacacgtgctacaatggccggtacagagggttgccaacc--cgcgagggggagctaatcccacaaagccggtcgtagtccggatcggagtctgcaactcgactccgtgaagtcggaatcgctagtaatcgcggatcagca-cgccgcggtgaatacgttcccgggccttg-tacacaccgcccgtcacaccatgggagtgggctgtaccagaagtaggtagtctaaccttc------gggggggcgctt-accacggta---------------------------------------------------------------------- 'JF272102.1.1499_uncultivated_environmental_bacteria' --------agagtttga-tcctggctcagattgaa-cgctggcggcatgcttaac-acatgc-aagtcgaacggtaacagc------------------------agag----------------------------------------------------------------------cttgct--------ctggctgacgagtggcggacgggtgagtaacgcgtaggaatctgcccttt-ggtgggggacaactggaggaaactccagctaataccgcataagccttac-----------------gagggaaagcggg-----ggatc--------ttc------g--gacctcgcgccgatg-gatgagcctgcgtcggattagcttgttggtggggtaatggcctacc--aaggcgacgatccgtagctggtctgagaggatgatcagccacactgggactgagacacggcccagactcctacggg-aggcagcagtg--gggaa-tattggacaatgggcgaaagcctgatccagcaatgccgcgtgtgtgaagaaggccctagggttgtaaagcactttcagtagagaagaaaagcttaggg-ttaataccctt-gagt-cttgacgtaacctacagaagaagcaccggctaactctgtgccagcagccgcggtaatacagagggtgcgagcgttaatcggaattactgggcgtaaagggc-gcgtaggcggcctgataagtcggatgtgaaagccctgggcttaacctgggaattgcattcgatactgtcaagct-agagtacggtagaggaaagcggaatt-ccgggtgtagcggtgaaatgcgtagatatccggaggaacatcagtggcgaagg--cggctttctggactgatactgacgctgaggcgcgaaagcgtgggg-agcaaacaggattagataccctggtagtccacgccctaaacgatgagaactagccgttgggagcatc-------t-aagctcttagtggcgcagctaacgcgttaagtt-ctccgcctggggagtacggccgc-aaggttaaaactcaaa-ggaattgac-gggggcccgcacaagcggtggagcatgtggtttaattcgatgcaacgcgaagaaccttacctgcccttgac-attgacagaaccctggagagatccgggggtgccttcggg-cctg-gaaaacaggtgctgcatggc-tgt-cgtcagctcgtgtcgtg--agatgttgggttaagtc-ccgtaacgagcgcaacccttatccttagttgccagcg-gttag-gccgggaactctagggagactgccggtgacaaaccggaggaaggtggggatgacgtcaagtcatcatggcccttacgggcagggctacacacgtgctacaatggacggtacagacggtcgcgaacc--cgcgaggggaagctaatctgataaagccgttcgtagtccggattggagtctgcaactcgactccatgaagtcggaatcgctagtaatcgcagatcagaa-cgctgcggtgaatacgttcccgggccttg-tacacaccgcccgtcacaccatgggagtgggctgcaaaagaagtaggtagcttaaccttc------gggagggcgctt-accactttgtggttcatgactggggtgaagtcgtaacaaggtagcc--------------------------------- 'KC009908.1.1512_uncultivated_environmental_bacteria' tagagtttagagtttga-tcttggctcagattgaa-cgctggcggcatgcctaac-acatgc-aagtcgaacgggaacg-ag-----------------------ggag----------------------------------------------------------------------cttgct-------cccaggcgtcgagtggcggacgggtgagtaatacttaggaatctgcccatt-agtgggggacaactagaagaaattctagctaataccgcatacgccctac-----------------gggggaaagcggg-----ggatc--------ttc------g--gacctcgcgctaatg-gatgagcctaagtcggattagcttgttggtgaggtaacggcctacc--aaggcgacgatccgtagctggtctgagaggacgatcagccacaccgggactgagacacggcccagactcctacggg-aggcagcagtg--gggaa-tattggacaatgggcgcaagcctgatccagcaatgccgcgtgtgtgaagaaggcctgcgggttgtaaagcactttcagtagagaagaaaagcctacgg-ttaatacccgt-gagt-cttgacgtaacctacagaagaagcaccggctaactccgtgccagcagccgcggtaatacggagggtgcgagcgttaatcggaattactgggcgtaaagcgc-gcgtaggcggctttgtaagtcggatgtgaaagccccgggcttaacctgggaattgcattcgatactgcagggct-agagtatggtagaggaaagcggaatt-cccggtgtagcggtgaaatgcgtagatatcgggaggaacaccagtggcgaagg--cggctttctggaccaatactgacgctgaggcgcgaaagcgtgggg-agcaaacaggattagataccctggtagtccacgccctaaacgatgagaactagccgttgggggtatt-------t-aaacccttcgtggcgcagctaacgcgttaagtt-ctccgcctggggagtacggccgc-aaggttaaaactcaaa-ggaattgac-ggggacccgcacaagcggtggagcatgtggtttaattcgatgcaacgcgaagaaccttacctgcccttgac-atcctcggaaccttccagagatggttgggtgccttcgggaaccg-agagacaggtgctgcatggc-tgt-cgtcagctcgtgtcgtg--agatgttgggttaagtc-ccgtaacgagcgcaacccttgtccctagttgccagcg-gttcg-gccgggaactctagggagactgccggtgacaaaccggaggaaggtggggatgacgtcaagtcatcatggcccttatgggcagggctacacacgtgctacaatggccggtacaaagggctgccaacc--cgcgagggggagccaatcccacaaaaccggtcgtagtccggatcggagtctgcaactcgactccgtgaagtcggaatcgctagtaatcgcagatcagca-cgctgcggtgaatacgttcccgggccttg-tacacaccgcccgtcacaccatgggagtgggctgcaaaagaagtaggtagcttaaccttc------gggagggcgctt-accactttgtggttcatgactggggtgaagtcgtaacaaggtacccgta------------------------------ 'GQ857549.1.1488_Diplorickettsia_massiliensis' -----------------------------attgaa-cgctggcggcatgcctaac-acatgc-aagtcgaacggcagcacagt----------------------aaaggtt-----------------------------------------------------------------tcggcctt-------tatgggtggcgagtggcggacgggtgagtaataggtaggaatctgtcctag-tgaccgggacaacccgaggaaactcgggctaataccgggcgatatcgaa-----------------agatcaaagcagg-----ggactttacgaaagta------a--ggccttgcgcactgg-ggtgagcctacgtcggattagctagttggtggggtaaaggcctacc--aaggcaacgatccgtagctggtctgagaggatgatcagccacattgggactgagacacggcccaaactcctacggg-aggcagcagtg--gggaa-tattggacaatgggggcaaccctgatccagcaatgccgcgtgtgtgaagaaggccttcgggttgtaaagcactttaggtggggaagaaaagtaacggg-tgaataatctg-ttat-tttgacggtacccgcagaataagcaccggctaactctgtgccagcagccgcggtaatacagagggtgcgagcgttaatcagaatgactgggcgtaaagggc-gtgtaggtggttgactaggtttgatgtgaaatccccgggcttaacctgggaatggcgtcgaaaacgggtcgact-cgagtgagacagagggttgtggaatt-tccggtgtagcggtgaaatgcgtagatatcggaaagaacatcagtggcgaagg--cgacaacctgggtcttaactgacactgaggcgcgaaggcgtgggg-agcaaacaggattagataccctggtagtccacgcggtaaacgatgagaactagctgtgaggtgtggggcattgct-ctgcgcgacgtagcgaagctaacgcgttaagtt-ctccgcctggggagtacggccgc-aaggttaaaactcaaa-ggaattgac-gggggcccgcacaagcggtggagcatgtggtttaattcgatgcaacccgaagaaccttacctacccttgac-atccttggaagggcgcagagatgtgcctgtgccgaaaggaacca-agagacaggtgctgcatggc-tgt-cgtcagctcgtgtcgtg--agatgttgggttaagtc-ccgtaacgagcgcaacccttatcctttgttgccacca-ggtcaagctgggaacttaaaggagactgccggtgataaaccggaggaaggtggggacgacgtcaagtcatcatggcctttatgggtagggctacacacgtgctacaatggggcgtacaataggaagccaacc--cgcgagggggagccaatcct-taaaacgtctcgcagtccggattggagtctgcaactcgactccatgaagttggaatcgctagtaatcgcagatcagca-agctgcggtgaatacgttctcgggccttg-tacacaccgcccgtcacaccatgggagtgggttttaccagaaggcggtagattaacctcgt--aagaggaggtcgccg-accacggtaagattcatgactggggtg---------------------------------------------------- 'AY359282.1.1482_Aquicella_lusitana' ----------------------------------------ggcggcacgcctaac-acatgc-aagtcgagcggtaacaggat--------------------ctgtag---------------------------------------------------------------------caataca-------gattgctgacgagcggcggacgggtgaggaacacgtaggaacttgcctggg-agagggggataaccaagggaaactttggctaataccgcgtaaactcgag-----------------agagcaaagctgccccgcacttg--------ttg------c--ggggtggcgcttcca-gagaggcctgcgtccgattagctagttggtggggtaagagctcacc--aaggcgatgatcggtaactggtctgagaggacgaccagtcacactgggactgagacacggcccagactcctacggg-aggcagcagtg--gggaa-tcttggacaatgggggcaaccctgatccagcgatgccgcgtgagtgaagaaggccttcgggtcgtaaagctctttaggttgggaagaagtgtgtatga-ggataattcat-gcac-attgacggtaccgacagaataagcaccggcaaactctgtgccagcagccgcggtaatacagagggtgcaagcgttgatcggagttactgggcgtaaagggc-gcgtaggcggatgagtgtgtgtgatgtgaaagccccgggcttaacctgggaagcgcatcgcaaactactgatct-ggagtatgggagagggtgatggaatt-tccggtgtagcggtgaaatgcgtagagatcggaaggaacgtcaatggcgaagg--cagtcacctggcccaatactgacgctgagg?gcgaaagcgtgggg-agcgaacaggattagataccctggtagtccacgctgtaaacgatgaggactagatgttgattgggg----------aaccaagcagtatcgaagctaacgcgataagtc-ttccgcctgggaagtacggccgc-aaggttgaaactcaaa-ggaattgac-gggggcccgcacaagcggtggagcatgtggtttaattcgatgcaacgcgaagaaccttacctacccttgac-atcctgcgaatcccgatgagagttgggagtgccgaaaggaacgc-agagacaggtgctgcatggc-tgt-cgtcagctcgtgttgtg--agatgttgggttaagtc-ccgtaacgagcgcaacccttgtccttagttgccagca---ttaagttggggactctaaggagactgccggtgaggaaccggaggaaggcggggacgacgtcaagtcatcatggcctttatgggtagggctacacacgtgctacaatggggcgtacagagggtagccaacc--cgcgagggggagccaatctcagaaagcgtctcgtagtccggattggagtctgcaactcgactccatgaagttggaatcgctagtaatcgcgaatcagcaacgtcgcggtgaatacgttcccgggccttg-tacacaccgcccgtcacgtcatgggagtggatggtaccagaagtgggtagttgaaccgaa------agggtgacgcct-accacggtatgattcatgactgggacgaagtcgtaacaaggtagccgta------------------------------ 'HM208383.1.1465_Coxiella_burnetii' ----------------------------gattgaa-cgctagcggcatgcttaac-acatgc-aagtcgaacggcagcgcgg-----------------------ggag----------------------------------------------------------------------cttgct-------ccctggcggcgagtggcggacgggtgagtaatgcgtaggaatctaccttgt-agtgggggataacctggggaaactcgggctaataccgcataatctcttt-----------------ggagcaaagcggg-----ggatc--------ttc------g--gacctcgtgctataa-gatgagcctacgtcggattagcttgttggtggggtaatggcctacc--aaggcgacgatccgtagctggtctgagaggacgatcagccacactgggactgagacacggcccagactcctacggg-aggcagcagtg--gggaa-tattggacaatgggggaaaccctgatccagcaatgccgcgtgtgtgaagaaggccttcgggttgtaaagcactttcggtggggaagaaattctcaagg-gtaatatcctt-gggc-gttgacgttacccacagaagaagcactggctaactctgtgccagcagccgcggtaatacagagagtgcaagcgttaatcggaatcactgggcgtaaagcgc-gcgtaggtggatatttaagtcggatgtgaaagccctgggcttaacctgggaattgcacccgatactgggtatct-tgagtatggtagagggaagtggaatt-tccggtgtagcggtgaaatgcgtagatatcggaaagaacaccagtggcgaagg--cgacttcctggaccaatactgacactgaggcgcgaaagcgtgggg-agcaaacaggattagagaccctggtagtccacgccgtcaacgatgagaactagctgttgggaagttc----------acttcttagtagcgaagctaacgcgttaagtt-ctccgcctggggagtacggccgc-aaggttaaaactcaaa-gaaattgac-gggggcccgcacaagcggtggagcatgtggtttaattcgatgcaacgcgaaaaaccttacctacccttgac-atcctcggaacttgtcagagatgatttggtgccttcgggaaccg-agtgacaggtgctgcatggc-tgt-cgtcagctcgtgtcgtg--agatgttgggttaagtc-ccgtaacgagcgcaaccctcgtccttagttgccagcg-agtcaagtcgggaactctaaggagactgccggtgataaaccggaggaaggtggggatgatgtcaagtcatcatggcccttacgggtagggctacacacgtgctacaatgggcagtacaaagggttgccaagc--cgcgaggtggagctaatcccagaaaactgctcgtagtccggattggagtctgcaactcgactccatgaagttggaatcgctagtaatcgcgaatcagca-tgtcgcggtgaatacgttctcgggccttg-tacacaccgcccgtcacaccatgggagtgaattgtaccagaagcgggtaggctaaccttc------gggaggccgctc-accacggtatgatccatgactggggtgaa-------------------------------------------------- 'AF406554.1.1461_Alkalilimnicola_ehrlichii_MLHE-1' -----------------------------attgaa-cgctggcggcatgcctaac-acatgc-aagtcgagcggtaaca---------------------------ggc----------------------------------------------------------------------ccttcg-------gggtgctgacgagcggcggacgggtgagtaacgcgtgggaatctgcccttc-ggtgggggatagcccggggaaactcggattaataccgcatacgccctac-----------------ggggcaaagtggc-----cctctg-------att------c--aaggtcacgccgagg-gatgagcccgcgtccgattagctagttggtggggtaaaggcctacc--aaggcgacgatcggtagctggtttgagaggatgatcagccacactgggactgagacacggcccagactcctacggg-aggcagcagtg--gggaa-tattggacaatgggcgaaagcctgatccagcaatgccgcgtgtgtgaagaaggcctgcgggttgtaaagcactttcagcagggaggaaaagcttacgg-ttaatagccgt-gggt-cttgacgttacctgcagaagaagcaccggctaactccgtgccagcagccgcggtaatacggagggtgcgagcgttaatcggaattactgggcgtaaagcgc-gcgtaggcggttcggtaagtcgggtgtgaaagccccgggctcaacctgggaattgcatccgatactgtcgggct-agagtctggtagagggca?tggaatt-ccgggtgtagcggtgaaatgcgtagatatccggaggaacaccagtggcgaagg--cgactgcctggaccaagactgacgctgaggtgcgaaagcgtgggt-agcaaacaggattagataccctggtagtccacgccgtaaacgatgagaactagccgttgggttcatt-------t-atggacttagtggcgcagctaacgcattaagtt-ctccgcctggggagtacggccgc-aaggttaaaactcaaa-ggaattgac-gggggcccgcacaagcggtggagcatgtggtttaattcgatgcaacgcgaagaaccttacctgcccttgac-atcctcggaaccagccagagatggctgggtgccttcgggaaccg-agtgacaggtgctgcatggc-tgt-cgtcagctcgtgtcgtg--agatgttgggttaagtc-ccgcaacgagcgcaacccttgtccctagttgccagcg-attcg-gtcgggaactctagggagactgccggtgacaaaccggaggaaggtggggatgacgtcaagtcatcatggcccttatgggcagggctacacacgtgctacaatggccggtacagagggttgccaagc--cgcgaggtggagctaatcccagaaagccggtcgtagtccggatcggagtctgcaactcgactccgtgaagtcggaatcgctagtaatcgcagatcagcaatgctgcggtgaatacgttcccgggccttg-tacacaccgcccgtcacaccatgggagttggctgcaccagaagcaggtagtctaaccttc------gggagggcgcct-gccacggtgtggtcgatgactggggtg---------------------------------------------------- 'AF114783.1.1464_Alkalispirillum_mobile' -----------------------------attgaa-cgctggcggcatgcctaac-acatgc-aagtcgagcggcagcagca-----------------------ggag----------------------------------------------------------------------cttgct-------cctggctggcgagcggcggacgggtgagtaacgcgtgggaatctgcccttc-ggtgggggatagcccggggaaactcggattaataccgcatacgccctac-----------------ggggcaaagtggc-----cctctg-------att------c--aaggtcacgccgaag-gatgagcccgcgtccgattagctagttggtggggtaaaggcctacc--aaggcgacgatcggtagctggtttgagaggatgatcagccacactgggactgagacacggcccagactcctacggg-aggcagcagtg--gggaa-tattggacaatgggcgaaagcctgatccagcaatgccgcgtgtgtgaagaaggcctgcgggttgtaaagcactttcagcagggaggaaaagcttacgg-ttaatacccgt-gagt-cttgacgttacctgcagaagaagcaccggctaactccgtgccagcagccgcggtaatacggagggtgcgagcgttaatcggaattactgggcgtaaagcgc-gcgtaggcggttcgataagtcgggtgtgaaagccccgggctcaacctgggaattgcatccgatactgtcgggct-agagtctggtagagggaagtggaatt-ccgggtgtagcggtgaaatgcgtagatatccggaggaacaccagtggcgaagg--cgacttcctggaccaagactgacgctgaggtgcgaaagcgtgggt-agcaaacaggattagataccctggtagtccacgccgtaaacgatgagaactagccgttgggctcatt-------t-atgggcttagtggcgcagctaacgcattaag-t-ctccgcctggggagtacggccgc-aaggttaaaactcaaa-ggaattgac-gggggcccgcacaagcggtggagcatgtggtttaattcgatgcaacgcgaagaaccttacctgcccttgac-atcctcggaaccagccagagatggctgggtgccttcgggaaccg-agtgacaggtgctgcatggc-tgt-cgtcagctcgtgtcgtg--agatgttgggttgagtc-ccgcaacgagcgcaacccttgtccctagttgccagcg-attcg-gtcgggaactctagggagactgccggtgacaaaccggaggaaggtggggatgacgtcaagtcatcatggcccatatgggcagggctacacacgtgctacaatggccggtacagagggttgccaagc--cgcgaggtggagctaatcccagaaagccggtcgtagtccggatcggagtctgcaactcgactccgtgaagtcggaatcgctagtaatcgcagatcagcaatgctgcggtgaatacgttcccgggccttg-tacacaccgcccgtcacaccatgggagttggctgcaccagaagcaggtagtctaaccttc------gggagggcgcct-gccacggtgtggtcgatgactggggtg---------------------------------------------------- 'AB643473.1.1507_Halorhodospira_neutriphila' --------agagtttga-tcctggctcagattgaa-cgctggcggcatgcctaac-acatgc-aagtcgagcggcagcgcgg-----------------------agag----------------------------------------------------------------------cctagct------ctctggcggcgagcggcggacgggtgagtaacgcgtgggtatctgcccttc-ggtgggggacagcccggggaaacccggattaataccgcatacgccctac-----------------gggggaaagtggg-----cctctg-------atc------c--aagctcacgccgaag-gatgagcccgcgtccgattagctagttggtagggtaaaggcctacc--aaggcgacaatcggtagctggtttgagaggacgatcagccacactgggactgagacacggcccagactcctgcggg-aggcagcagtg--gggaa-tattggacaatgggcgaaagcctgatccagcaatgccgcgtgtgtgaagaaggcctgcgggttgtaaagcactttcatcggggaggaaaagcgtcggg-ctaataccttg-gcgt-cttgacgttacccgaagaagaagcgccggcaaacttcgtgccagcagccgcggtaatacgaagggcgcaagcgttaatcggaatcactgggcgtaaagggc-gcgcaggcggtcgggtaagtcgggtgtgaaagccctgggctcaacctaggaattgcatccgatactgctcggct-agagtccggtagagggtagtggaatt-cccggtgtagcggtgaaatgcgtagatatcgggaggaacaccagtggcgaagg--cgactgcctggaccgagactgacgctgaggcgcgaaagcgtgggt-agcaaacaggattagataccctggtagtccacgccgtaaacgatgaggactagccgttggccccatt-------t-aaggggttagtggcgtagctaacgcgttaagtc-ctccgcctggggagtacggccgc-aaggctaaaactcaaa-ggaattgac-gggggcccgcacaagcggtggagcatgtggtttaattcgatgcaacgcgaagaaccttaccggcccttgac-atcctcggaaccttcctgagagggaagggtgccttcgggagccg-agtgacaggtgctgcatggc-tgt-cgtcagctcgtgtcgtg--agatgttgggttaagtc-ccgcaacgagcgcaacccttgtccctagttgccagcg-gtccg-gccgggaactctagggagactgccggtgacaaaccggaggaaggtggggacgacgtcaagtcatcatggcccttatgggccgggctacacacgtgctacaatggcaggtacaaagggtcgcgaagc--cgcgaggtggagctaatcctcgaaagcctgtcctagtccggatcggagtctgcaactcgactccgtgaagctggaatcgctagtaatcgcagatcagcaatgctgcggtgaatacgttcccgggccttg-tacacaccgcccgtcacaccatgggagtcggctgcaccagaagtgcgtagcctaacccgca----agggagggcgcgt-accacggtgtggtcggcgactggggtgaagtcgtaacaaggtaacc--------------------------------- 'CP000544.952248.953785_Halorhodospira_halophila_SL1' --------agagtttga-tcctggctcagattgaa-cgctggcggcatgcctaac-acatgc-aagtcgagcggcagcgcgga----------------------ggag----------------------------------------------------------------------cttgctc------ctctggcggcgagcggcggacgggtgagtaacgcgtgggaatttacccttc-ggtgggggatagcccggggaaactcggattaataccgcatacgccctac-----------------gggggaaagtggg-----cctctg-------att------c--aagctcacgccgaag-gatgagcccgcgtccgattagctagttggtggggtaaaggcctacc--aaggcgacgatcggtagctggtttgagaggatgatcagccacactgggactgagacacggcccagactcctacggg-aggcagcagtg--gggaa-tattggacaatgggcgaaagcctgatccagcaatgccgcgtgtgtgaagaaggcctgcgggttgtaaagcactttcatcggggaggaaaagcgttggg-ttaataccctg-gcgt-cttgacgttacccgaagaagaagcgccggcaaacttcgtgccagcagccgcggtaatacgaagggcgcaagcgttaatcggaatcactgggcgtaaagggc-gcgtaggcggtcaggtaagtcgggtgtgaaagccctgggctcaacctaggaattgcatccgatactgcttgact-agagttcggtagagggtagtggaatt-cccggtgtagcggtgaaatgcgtagatatcgggaggaacaccagtggcgaagg--cgactgcctggaccgaaactgacgctgaggcgcgaaagcgtgggt-agcaaacaggattagataccctggtagtccacgccgtaaacgctgagaactagccgttgggcctatt-------t-ataggcttagtggcgcagctaacgcattaagtt-ctccgcctggggagtacggccgc-aaggctaaaactcaaa-ggaattgac-gggggcccgcacaagcggtggagcatgtggtttaattcgatgcaacgcgaagaaccttaccggcccttgac-atcctcggaaccttctggagacagaggggtgccttcgggagccg-agtgacaggtgctgcatggc-tgt-cgtcagctcgtgtcgtg--agatgttgggttaagtc-ccgcaacgagcgcaacccttgtccctagttgccagcg-gttcg-gccgggaactctagggagactgccggtgacaaaccggaggaaggtggggacgacgtcaagtcatcatggcccttatgggccgggctacacacgtgctacaatggcgggtacagagggttgccaatc--cgcgaggtggagctaatccctgaaagcccgtcctagtccggatcggagtctgcaactcgactccgtgaagcaggaatcgctagtaatcgcagatcagcaatgctgcggtgaatacgttcccgggccttg-tacacaccgcccgtcacaccatgggagtcggctgcaccagaagtgcgtagtctaaccttc------gggaggacgcgt-accacggtgtggtcggcgactggggtgaagtcgtaacaaggtagccgtaggggaacctgcggctggatcacctccttt- 'M26631.1.1487_Arhodomonas_aquaeolei' -?aactgaagagtttga-tcctggctcagattgaa-cgctggcggcatgcctaac-acatgc-aagtcgagcggcagcagct?------------------------------------------------------------------------------------------------?cttcg-------ggaggctggcgagcggcggacgggtgagtaacgcgtgggaatctgcccttt-ggtgggggatagcccggggaaactcggattaataccgcatacgccctgc-----------------ggggcaaagtggc-----cctct--------gaa------t--atggtcacgccgaag-gatgagcccgcgtccgattagcttgttggtagggtaaaggcctacc--aaggcgacgatcggtagct?gtcttagcggacgatcagccacaccgggactgagacacggccc???ctcctacggg-aggcagcagtg--gggaa-tattggacaatgggggaaaccc??atccagcaatgccgcgtgggtgaagaaggcttgcgggttgtaaagccc?ttcagccgggaggaaaagcattcgg-ttaatacccgg-atgt-attgacgttaccggcagaagaagcaccggctaactccgtgccagcagccgcggtaatacggagggtgc?agcgttaatcggaattactgggcgtaaagcgc-gcgtaggcggtcggataagtcgggtgtgaaagccccgggctcaacctggg?attgcattcgatactgtctggct-agagtctggcagagggaggtggaatt-tccggtgtagcggtgaaatgcgtagatatcggaaggaacaccagtggcgaagg--cgacctcctgggccaagactgacgctgaggtgcg?aagcgtgggg-agcaaacaggattagataccctggtagtccacgccgtaaacgatgagaactagccgttggcctcatt-------t-atgaggctcgtggcgcagctaacgcgataagtt-ctc?gcctggggagtacggccgc-aaggttaaaactcaaa-ggaattgac-gggggcc?gcacaagcggtggagcatgtggtttaattcgatg?aacgcgaagaaccttacctgcccttgac-atcctcggaacttgtcagagatgacttggtgccttcgggaaccg-agtgacaggtgctgcatggc-tgt-cgtcagctcgtgtcgtg--agatgttgggttaagtc-ccgcaacgagcgcaacccttgtccctggttgccagcg-gttcg-gccgggaactccagggagactgccggtgacaaaccggaggaaggtggggatgacgtcaagtcatcatggcccttatgggcagggctacacacgtgctacaatggccggtacagtcggttgccaacc--cgcgagggggagccaatctgctaaagccggtcccagtccggattggagtctgcaactcgactccatgaagtcggaatcgctagtaatcgcggatcagca?tgccgcggtgaatacgttcccgggccttg-tacacaccgcccgtcacaccatgggagtcggct?caccagaagtcggtagtctaaccttc------gggaggacg?cg-cc?acggtgtggtcga?g?c??ggg------------------------------------------------------ 'HM038001.1.1482_Nitrococcus_mobilis' --------agagtttgatttatggctcagattgaa-cgctggcggcaWgccWaac-Mcatgcgaagtcgagcggcagcagcgc------------------------------------------------------------------------------------------------ctttcttcggaaaggtggctggcgagcggcggacgggtgagtaacgcgtgggaatctacccttc-ggtgggggatagcccggggaaactcggattaataccgcatacgccctat-----------------gggggaaagcggg-----cctctg------cttg------c--aagctcgcaccgatg-gatgagcccgcgtccgattagctagttggtggggtaaaggcctacc--aaggcgacgatcggtagctggtctgagaggacgatcagccacactgggactgagacacggcccagactcctacggg-aggcagcagtg--gggaa-tattggacaatgggcgaaagcctgatccagcaatgccgcgtgggtgaagaaggcttgcgggttgtaaagccctttcagccgggaggaaaagcatcggg-ttaatacctcg-atgt-tttgacgttaccggcagaagaagcaccggctaactccgtgccagcagccgcggtaatacggagggtgcaagcgttaatcggaattactgggcgtaaagcgc-atgtaggcggtcgaataagtcgggtgtgaaagccccgggctcaacctgggaattgcatccgatactgtttggct-agagtctggtagagggaggcggaatt-cccggtgtagcggtgaaatgcgtagatatcgggaggaacaccagtggcgaagg--cggtctcctggatcYtgactg-cgctgagg-gcgaaagcgtgggg-agcaaacaggattagataccctggtagtccacgccgtaaacgatggggactagScgttggattcatt-------t-atgagtctagtggcgcagctaacgctttaagttcctccScctggggagtacggccgc-Daggttaaaactcaaa-Rgaattgac-gggggcccgcacaagcggtggagcatgtggtttaattcgatgcaacgcgaagaaccttacctgctcttgac-atctccggaaccttgcagagatgtgagggtgccttcgggaaccg-gatgacaggtgctgcatggc-tgt-cgtcagctcgtgtcgtg--agatgttgggttaagtc-ccgcaacgagcgcaacccttgcccttagttaccagcg-gttcg-gccggggactctagggggactgccggtgacaaaccggaggaaggtggggatgacgtcaagtcatcatggcccttatgggcagggctacacacgtgctacaatggccggtacaaagggttgcaaacc--cgtaagggggagctaatcccaaaaagccggtcccagtccggattgcagtBtgcaactcgactgcatgaaatSggaatcgctagtaatcgcgRatcagcaatgccgcggtgaatacgttccBgggccttg-tacacaccgcccgtcacaccatgggagtcggctgSaccagaagtcggtagttagaccttcttagaaaggggggcgctg-cccacggtgggt------------------------------------------------------------------- 'AM404264.1.1448_Aquisalimonas_asiatica' ------ttagagtttga-tcctggctcagattgaa-cgctggcggcatgcctaac-acatgc-aagtcgagcggcagcatca-----------------------ggag----------------------------------------------------------------------cttgct-------cctggatggcgagcggcggacgggtgagtaacacgtgggaatctgcccttt-ggcgggggatagcccggggaaactcggattaataccgcatactccctac-----------------ggggaaaagtagg-----cctctg-------ttt------c--atgcttacaccaaag-gatgagcccgcgcccgattagctagttggtaaggtaacggcttacc--aaggcgacgatcggtagctggtctgagaggatgatcagccacactgggactgagacacggcccagactcctacggg-aggcagcagtg--gggaa-tattggacaatgggggaaaccctgatccagcaatgccgcgtgtgtgaagaaggcctgcgggttgtaaagcactttcagcagggaggaaaatctcacgg-ttaatacccgt-gagc-cttgacgttacctgcagaagaagcaccggctaactccgtgccagcagccgcggtaatacggagggtgcaagcgttaatcggaattactgggcgtaaagggc-acgtaggcggccaggtaagttagctgtgaaagccccgggctcaacctgggaattgcagttaatactgcttggct-agagtttggtagagggtggtggaatt-cccggtgtagcggtgaaatgcgtagatatcgggaggaacaccagtggcgaagg--cggccacctggaccaaaactgacgctgaggtgcgaaagcgtgggg-agcaaacaggattagataccctggtagtccacgccgtaaacgctgagaactagccgttggacccatt-------c-aagggtttagtggcgcagctaacgcgttaagtt-ctccgcctggggagtacggccgc-aaggttaaaactcaaa-ggaattgac-gggggcccgcacaagcggtggagcatgtggtttaattcgatgcaacgcgaagaaccttacctgcccttgac-atcctcggaacttgtcagagatgacttggtgccttcgggaaccg-agtgacaggtgctgcatggc-tgt-cgtcagctcgtgtcgtg--agatgttgggttaagtc-ccgcaacgagcgcaacccttgtccctagttgccagcg-attcg-gtcgggaactctagggagactgccggtgacaaaccggaggaaggtggggatgacgtcaagtcatcatggcccttatgggcagggctacacacgtgctacaatggccggtacaacgggttgccaagc--cgcgaggtggagccaatctcgcaaagccggtcgtagtccggattggagtctgcaactcgactccatgaagtcggaatcgctagtaatcgcagatcagcattgctgcggtgaatacgttcccgggccttg-tacacaccgcccgtcacaccatgggagttggctgcaccagaagcgggtagtctaaccttc-------------------------------------------------------------------------------------------------- 'EF103127.1.1447_Natronocella_acetinitrilica' -----------gtttga-tcctggctcagattgaa-cgctggcggcatgcctaac-acatgc-aagtcgagcggtaaca---------------------------ggc----------------------------------------------------------------------ccttcg-------gggcgctgacgagcggcggacgggtgagtaacgcgtaggaatctgcccatt-ggtgggggacaacccggggaaactcgggctaataccgcatacgccctac-----------------gggggaaagcggg-----ggatc--------ttc------g--gacctcgcgccaatg-gatgagcctgcgtccgattagctagttggtagggtaaaagcctacc--aaggcgacgatcggtagctggtctgagaggatgatcagccacactgggactgagacacggcccagactcctacggg-aggcagcagtg--gggaa-tattggacaatgggggcaaccctgatccagcaatgccgcgtgtgtgaagaaggcctgcgggttgtaaagcactttcagtagggaggaaaagcttatgg-ttaatagctgt-gagt-cttgacgttacctacagaagaagcaccggctaactccgtgccagcagccgcggtaatacggagggtgcgagcgttaatcggaattactgggcgtaaagcgc-gcgtaggcggttcgttaagttagctgtgaaagccccgggcttaacctgggaattgcagttaatactggcgaact-agagtctggcagagggcagtggaatt-cccggtgtagcggtgaaatgcgtagatatcgggaggaacaccagtggcgaagg--cgactgcctgggccaagactgacgctgaggtgcgaaagcgtgggg-agcaaacaggattagataccctggtagtccacgccgtaaacgatgagaactagccgttgggt?catt-------t-aagggcttagtggcgcagctaacgcattaagtt-ctccgcctggggagtacggccgc-aaggttaaaactcaaa-ggaattgac-gggggcccgcacaagcggtggagcatgtggtttaattcgatgcaacgcgaagaaccttacctgcccttgac-atcctcggaacttgtcagagatgacttggtgccttcgggaaccg-agtgacaggtgctgcatggc-tgt-cgtcagctcgtgtcgtg--agatgttgggttaagtc-ccgcaacgagcgcaacccttgtccctagttgccagcg-attcg-gtcgggaactctagggagactgccggtgacaaaccggaggaaggtggggatgacgtcaagtcatcatggcccttatgggcagggctacacacgtgctacaatggtcggtacagagggttgccaagc--cgcgaggtggagctaatcccagaaagccgatcgtagtccggatcgcagtctgcaactcgactgcgtgaagtcggaatcgctagtaatcgcagatcagcactgctgcggggaatacgttcccgggccttg-tacacaccgcccgtcacaccatgggagttggctgcaaaagaagcaggtagtctaaccttc------gggaggacg----------------------------------------------------------------------------------- 'AF287298.1.1539_Nitrosococcus_halophilus' --------agagtttga-tcatggctcagattgaa-cgctggcggcatgcttaac-acatgc-aagtcggacggcagcagcgc---------------------ttaag----------------------------------------------------------------------cttgctt-----aggcggctggcgagtggcggacgggtgagtaacgcgtaggaatctggcctct-agagggggataactcggggaaactcgggctaataccgcatatactctga-----------------ggaggaaagcggg-----ggact--------ttc------g--ggcctcgcgctaggg-gatgagcctgcgtccgattagctagttggtggggtaagggcctacc--aaggcgacgatcggtagctggtctgagaggacgatcagccacactgggactgagacacggcccagactcctacggg-aggcagcagtg--gggaa-tattggacaatgggcgcaa?cctgatccagcaatgccgcgtgggtgaagaaggccttcgggttgtaaagccctttcagtggggaagaaaagcggtgtg-tgaatagcgca-tcgt-attgacgttacccacagaagaagcaccggctaactccgtgccagcagccgcggtaatacggagggtgcgagcgttaatcggaattactgggcgtaaagggc-gcgtaggcggcttagtaagttgggtgtgaaagccctgggctcaacctgggaattgcacttgatactgctgagct-agagtgtggtagagggaggcggaatt-tccggtgtagcggtgaaatgcgtagatatcggaaggaacaccagtggcgaagg--cggcctcctggaccataactgacgctgaggtgcgaaagcgtgggg-agcgaacaggattagataccctggtagtccacgccctaaacgatgagaactagacgttgggagggta---------agcctttcagtgttgtagccaacgcgataagtt-ctccgcctggggagtacggccgc-aaggttgaaactcaaa-tgaattgac-gggggcccgcacaagcggtggagcatgtggtttaattcgatgcaacgcgaagaaccttacctggttttgac-atcctcggaaccctgcagagatgcgggggtgccttcgggagccg-ggagacaggtgctgcatggc-tgt-cgtcagctcgtgtcgtg--agatgttgggttaagtc-ccgcaacgagcgcaacccttacctctagttgccagcg-gttag-gccgggcactctagggggactgccgttgacaaaacggaggaaggtggggatgacgtcaagtcatcatggcccttatggccagggctacacacgtgctacaatggccggtacagagggtggccaagc--agcgatgcggagctaatctcagaaagccggtcgtagtccggattgcagtctgcaactcgactgcatgaagtcggaatcgctagtaatcgcggatcagcaatgccgcggtgaatacgttcccgggccttg-tacacaccgcccgtcacaccatgggagttggctgcaccagaagtaggtggcttaaccttc------gggggggcgctt-accacggtgtggtcaatgactggggtgaagtcgtaacaaggtagccgtaggggaacctgcggctggatcacctccttt- 'AY690336.1.1541_Nitrosococcus_oceani' -----------gtttga-tcatggctcagattgaa-cgctggcggcatgcttaac-acatgc-aagtcgaacggcagcagcac---------------------ctaag----------------------------------------------------------------------cttgctt-----aggtggctggcgagtggcggacgggtgagtaacgcgtgggaatctggcctct-agagggggataactcggggaaactcgggctaataccgcataatctctaa-----------------ggaggaaagcggg-----ggacc--------gaa------a--ggcctcgcgctgggg-gatgagcctgcgtccgattagctagttggtggggtaagggcctacc--aaggcgatgatcggtagctggtctgagaggacgatcagccacactgggactgagacacggcccagactcctacggg-aggcagcagtg--gggaa-tattggacaatgggggcaaccctgatccagcaatgccgcgtgggtgaagaaggctttcgggttgtaaagccctttcagtggggaagaaaagcgatgtg-tgaatagcaca-tcgt-gttgacgttacctacagaagaagcaccggctaactccgtgccagcagccgcggtaatacggagggtgcgagcgttaatcggaattactgggcgtaaagggc-gcgtaggcggtttggtaagttgggtgtgaaagccccgggctcaacctgggaatggcacttgatactgcctggct-agagtatggttgagggaggcggaatt-tccggtgtagcggtgaaatgcgtagatatcggaaggaacaccagtggcgaagg--cggcctcctggaccactactgacgctgaggtgcgaaagcgtgggg-agcaaacaggattagataccctggtagtccacgccctaaacgatgagaactagacgttgggagggat---------agcctttcagtgttgcagctaacgcgttaagtt-ctccgcctggggagtacggccgc-aaggttgaaactcaaa-tgaattgac-gggggcccgcacaagcggtggagcatgtggtttaattcgatgcaacgcgaagaaccttacctggccttgac-atccccggaactttgctgagaggcgaaggtgccttcgggagccg-ggagacaggtgctgcatggc-tgt-cgtcagctcgtgtcgtg--agatgttgggttaagtc-ccgcaacgagcgcaacccttatctctagttgccagcg-gttcg-gccgggcactctagagggactgccgttgacaaaacggaggaaggtggggatgacgtcaagtcatcatggcccttatggccagggctacacacgtgctacaatggccggtacagagggtggccaagc--agcgatgcggagctaatctcagaaaaccggtcgtagtccggattgcagtctgcaactcgactgcatgaagtcggaatcgctagtaatcgcggatcagcaatgccgcggtgaatacgttcccgggccttg-tacacaccgcccgtcacaccatgggagttggttgcaccagaagtgggtagtttaaccttc------gggaggacgctt-actacggtgtggtcaatgactggggtgaagtcgtaacaaggtagccgtaggggaacctgcggctggatcacctcctaa- 'EU700082.1.1495_Ectothiorhodospira_shaposhnikovii' ------ttgagttttga-tcctggctcagattgaa-cgctggcggcatgcttaac-acatgc-aagtcgaacggtaac-----------------------------ag----------------------------------------------------------------------gccttc-------gggcgctgacgagtggcggacgggtgagtaacgcgtaggaatctgcctggt-agtgggggacaacccggggaaactcgggctaataccgcatacgccctaa-----------------gggggaaagcggg-----ggctc--------ttc------g--gacctcgcgctatca-gatgagcctgcgtccgattagctagttggtggggtaatggcccacc--aaggcgacgatcggtagctggtctgagaggatgatcagccacactgggactgagacacggcccagactcctacggg-aggcagcagtg--gggaa-tattggacaatgggcgcaagcctgatccagcaatgccgcgtgtgtgaagaaggcctgcgggttgtaaagcactttcagtggggaggaaaagcgggtgc-ctaatacgtgc-ctga-cttgacgttacccacagaagaagcaccggctaactccgtgccagcagccgcggtaatacggagggtgcaagcgttaatcggaattactgggcgtaaagcgc-acgtaggtggtgatgtcagtcagatgtgaaagccctgggctcaacctgggaactgcatctgatactgcatggct-agagtttggtagaggagagtggaatt-tccggtgtagcggtgaaatgcgtagatatcggaaggaacaccagtggcgaagg--cgactctctggactaaaactgacactgaggtgcgaaagcgtgggg-agcaaacaggattagataccctggtagtccacgccgtaaacgatgagaactagccgttgggagggtt-------t-aacctcttagtggcgcagcaaacgcgttaagtt-ctccgcctggggagtacggccgc-aaggttgaaactcaaa-ggaattgac-gggggcccgcacaagcggtggagcatgtggtttaattcgatgcaacgcgaagaaccttacctgcccttgac-atcctcggaatcctgcagagatgtgggagtgccttcgggaaccg-agtgacaggtgctgcatggc-tgt-cgtcagctcgtgtcgtg--agatgttgggttaagtc-ccgcaacgagcgcaacccttgtccctagttgccaaca-ctttg-ggtgggaactctagggagactgccggtgacaaaccggaggaaggtggggatgacgtcaagtcatcatggcccttatgggcagggctacacacgtgctacaatggccagtacagtgggttgccaagc--cgcgaggtggagctaatcccaaaaagctggtcgtagtccggattggagtctgcaactcgactccatgaagtcggaatcgctagtaatcgcagatcagcattgctgcggtgaatacgttcccgggccttg-tacacaccgcccgtcacaccatgggagttggctgcaccagaagtggatagtctaaccttc------gggaggacgttc-accacggtgtggtcaatgactggggtgaagtcgta-cagtaca------------------------------------ 'AY298904.1.1445_Ectothiorhodosinus_mongolicus' -------------------------------------gctggcggcatgcttaac-acatgc-aagtcgaacggtaac-----------------------------ag----------------------------------------------------------------------gccttc-------gggcgctgacgagtggcggacgggtgagtaacgcgtaggaatctgcccagt-agtgggggacaacccggggaaactcgggctaataccgcatacgccctac-----------------gggggaaagcagg-----ggatc--------ttc------g--gaccttgcgctattg-gatgagcctgcgtcggattagcttgttggtggggtaatggcccacc--aaggcgacgatccgtagctggtctgagaggatgatcagccacactgggactgagacacggcccagactcctacggg-aggcagcagtg--gggaa-tattggacaatgggcgcaagcctgatccagcaatgccgcgtgtgtgaagaaggcctgcgggttgtaaagcactttcagtggggaggaaaagcgggtac-ctaatacgtac-ttgt-cttgacgttacccacagaagaagcaccggctaactccgtgccagcagccgcggtaatacggagggtgcaagcgttaatcggaattactgggcgtaaagcgc-acgtaggtggctacatccgtcagatgtgaaagccccgggctcaacctgggaattgcatctgatactgtgtagct-agagtttggtagaggagagtggaatt-tccggtgtagcggtgaaatgcgtagatatcggaaggaacaccagtggcgaagg--cgactctctggactaaaactgacactgaggtgcgaaagcgtgggg-agcaaacaggattagataccctggtagtccacgccgtaaacgatgagaactagccgttgggggga?t-------t-aaccccttagtggcgcagctaacgcgataagtt-ctccgcctggggagtacggccgc-aaggttgaaactcaaa-ggaattgac-gggggcccgcacaagcggtggagcatgtggtttaattcgatgcaacgcgaagaaccttacctgcccttgac-atgctaggaatcccacagagatgtgggagtcccttcgggaacct-agacacaggtgctgcatggc-tgt-cgtcagctcgtgtcgtg--agatgttgggttaagtc-ccgcaacgagcgcaacccttgtccctagttgccagcg-attcg-gtcgggaactctagggagactgccggtgacaaaccggaggaaggtggggatgacgtcaagtcatcatggcccttatgggcagggctacacacgtgctacaatggtcggtacagagggttgccaagc--cgcgaggtggagctaatcccagaaagccgatcgtagtccggattggagtctgcaactcgactccatgaagtcggaatcgctagtaatcgcggatcagcattgccgcggtgaatacgttcccgggccttg-tacacaccgcccgtcacaccatgggagttggttgcaccagaagtagctagtctaaccttc------gggaggacggtt-accacggtgtggtcaatgact---------------------------------------------------------- 'AGFD01000020.25655.27178_Thiorhodospira_sibirica_ATCC_700588' --------agagtttga-tcctggctcagattgaa-cgctggcggcatgcctaac-acatgc-aagtcgaacggtaac-----------------------------ag----------------------------------------------------------------------gccttc-------gggcgctgacgagtggcggacgggtgagtaacgcgtaggaatctgcctggt-agtgggggataacccggggaaactcgggctaataccgcatacgccctac-----------------gggggaaagcggg-----ggatc--------ttc------g--gacctcgcgttatca-gatgagcctgcgtccgattagctagttggtgaggtaatggctcacc--aaggcgacgatcggtagctggtctgagaggacgatcagccacactgggactgagacacggcccagactcctacggg-aggcagcagtg--gggaa-tattggacaatgggcgcaagcctgatccagcaatgccgcgtgtgtgaagaaggcctgcgggttgtaaagcactttcagtggggaggaaaagctcaatg-ttaataccatt-gggt-cttgacgtaacccacagaagaagcaccggctaactccgtgccagcagccgcggtaatacggagggtgcaagcgttaatcggaattactgggcgtaaagcgc-acgtaggtggttgtgtcagtcagatgtgaaagccccgggcttaacctgggaactgcatctgatactgcacggct-agagtttggtagaggagggcggaatt-cccggtgtagcggtgaaatgcgtagatatcgggaggaacaccagtggcgaagg--cggctctctggactaaaactgacactgaggtgcgaaagcgtgggg-agcaaacaggattagataccctggtagtccacgccgtaaacgatgagaactagccgttgggaggatt-------t-agcctcttagtggcgcagcaaacgcattaagtt-ctccgcctggggagtacggccgc-aaggttgaaactcaaa-ggaattgac-gggggcccgcacaagcggtggagcatgtggtttaattcgatgcaacgcgaagaaccttacctacccttgac-atcctcggaacttgtcagagatgacttggtgccttcgggaaccg-agagacaggtgctgcatggc-tgt-cgtcagctcgtgtcgtg--agatgttgggttaagtc-ccgcaacgagcgcaacccttatccttagttgccagcg-attcg-gtcgggaactctagggagactgccggtgacaaaccggaggaaggtggggatgacgtcaagtcatcatggcccttatgggtagggctacacacgtgctacaatggccagtacaaagggttgccaacc--cgcgagggggagctaatctcaaaaagctggtcgtagtccggattggagtctgcaactcgactccatgaagtcggaatcgctagtaatcgcagatcagcattgctgcggtgaatacgttcccgggccttg-tacacaccgcccgtcacaccatgggagttggttgcaccagaagtaggtagtctaaccttc------gggagggcgctt-accacggtgtggtcaatgactggggtgaagtcgtaacaaggtagccgtaggggaacctgcggctggatcacct------ 'AF126545.1.1465_Thioalkalivibrio_denitrificans' --------------------ctggctcagattgaa-cgctggcggcatgcctaac-acatgc-aagtcgaacgctaacgcg------------------------ggag----------------------------------------------------------------------cttgct--------cctggcgacgagtggcggacgggtgagtaacgcgtaggaatctgcctggt-ggtgggggacaa-ctggggaaactcgagctaataccgcatacg-cctac-----------------gggggaaagcggg-----ggatc--------ttc------g--gacctcgcgccatca-gatgagcctgcgtccgattagcttgttggtagggtaacggcctacc--aaggcgacgatcggtagctggtctgagaggatgatcagccacactgggactgagacacggcccagactcctacggg-aggcagcagtg--gggaa-tattggacaatgggcgaaagcctgatccagc?atgccgcgtgtgtgaagaaggcctgcgggttgtaaagcactttcagtagggaagaaaagcctggcg-ccaataacgcc-gggt-cttgacgttacctacagaagaagcaccggctaactccgtgccagcagccgcggtaatacggagggtgcaagcgttaatcggaattactgggcgtaaagcgc-acgtaggcggccttgtaagtcggatgtgaaagccccgggcttaacctgggaattgcatccgatactgcagggct-agagtttggtagaggagagtggaatt-cccggtgtagcggtgaaatgcgtagatatcgggaggaacaccagtggcgaagg--cgactctctggaccaaaactgacgctgaggtgcgaaagcgtgggg-agcaaacaggattagataccctggtagtccacgccgtaaacgatgagaactagccgttgggaggatta------t-gtcctcYtagtggcgcagctaacgcattaagtt-ctccgcctggggagtacggccgc-aaggttgaaactcaaa-ggaattgac-gggggcccgcacaagcggtggagcatgtggtttaattcgatgcaacgcgaagaaccttacctgcccttgac-atcctcggaacttgtcagagatgacttggtgccttcgggaaccg-agtgacaggtgctgcatggc-tgt-cgtcagctcgtgtcgtg--agatgttgggttaagtc-ccgcaacgagcgcaacccttgtccctagttgccagca-cttcg-ggtgggaactctagggagactgccggtgacaaaccggaggaaggtggggatgacgtcaagtcatcatggcccttatgggtagggctacacacgtgctacaatggccggtacagagggtcgccaacc--cgcgagggggagccaatcccagaaagctggtcgtagtccggatcggagtctgcaactcgactccgtgaagtcggaatcgctagtaatcgcggatcagcattgccgcggtgaatacgttcccgggccttg-tacacaccgcccgtcacaccatgggagttggctgcaccagaagtggatagtctaaccttc------gggaggacgtttcaccacggtgtggtcaatgatc---------------------------------------------------------- 'AF329083.1.1474_Thioalkalivibrio_jannaschii' ------tgattgtttga-tcctggctcagattgaa-cgctcgcggtatgcttaYY-tcattt-tYYtctaacggtaacgcg------------------------ggag----------------------------------------------------------------------cttgct--------cctggcgacgagtggcggacgggtgagtaacgcgtaggaatctgcctggt-agcggaggacaactc-gggaaactcgagctaatactgcatacgccctac-----------------gggggaaagcggg-----ggatc--------ttc------g--gacctcgcactatca-gatgagcctgcgtccaattagcttgttggtgaggtaacggctcacc--aaggcgacgattggtagctggtctgagaggatgatcagccacactgggactgagacacggcccagactcctacggg-aggcagcagtg--gggaa-tattggacaatgggggaaaccctgatccagcaatgccgcgtgtgtgaagaaggcctgcgggttgtaaagcactttcagtagggaagaaaagccgacgg-ccaataccctt-cggt-cttgacatcacctacagaagaagcaccggctaactccgtgccagcagccgcggtaatacggagggtgcaagcgttaatcggaattactgggcgtaaagggc-acgcaggcggtcgtgtaagttagatgtgaaagccccgggcttaacctgggaaWtgcacctaatactatacgact-agagtttgataggggagagcggaattccccggtgtagcggtgaaatgcgtagatatcgggaggaacaccagtggcgaagg--cggctctctggatcaaaactgacgctgaggtgcgaaaSSKKgggt-agcaaacaggattagataccctggtagtccacgccctaaacgatgagaactagttgttggtcggaat-------t-tgccggtcagtgacgcagctaacgcattaagtt-ctccgcctggggagtacggccgc-aaggttgaaactcaaa-ggaattgac-gggggcccgcacaagcggtggagcatgtggtttaattcgatgcaacgcgaagaaccttacctacccttgac-atcctcggaacttgtcagagatgacttggtg-cttcgggaaccg-agtgacaggtgctgcatggc-tgt-cgtcagctcgtgtcgtg--agatgttgggttaagtc-ccgcaacgagcgcaacccttatccctagttgccagcg-gttcg-gccgggaactctagggagactgccggtgacaaaccggaggaaggtggggatgacgccaagtcatcatggcccttatgggtagggctacacacgtgctacaatggccggtacagagggctgccaacc--cgcgagggggagctaatcccacaaaaccggtcctagtccagattggagtctgcaactcgactccatgaagtcggaatcgctagtaatcgtggatcagcactgccacggtgaatacgttcccgggccttg-tacacaccgcccgtcacaccatgggagttgactgcaccagaagtggatagtctaacctcc------gggaggacgttc-accacggtgtggttaata------------------------------------------------------------- 'DQ469584.1.1297_Thiohalophilus_thiocyanatoxydans' -----------------------------------------------------------------------cagcagcag-------------------------agag----------------------------------------------------------------------cttgctc------tctggctggcgagtggcggacgggtgagtaatgcataggaatctgcccagt-agtgggggacaacctggggaaactcaggctaataccgcatacgacctac-----------------gggtgaaagtggg-----ggatc--------ttc------g--gacctcacgctactg-gatgagcctatgtcagattagcttgttggtgaggtaaaggctcacc--aaggcaacgatctgtagctggtctgagaggacgatcagccacactgggactgagacacggcccagactcctacggg-aggcagcagtg--gggaa-tattggacaatgggggcaaccctgatccagcaatgccgcgtgtgtgaagaaggcctgcgggttgtaaagcactttcaacagtgaagaaaagctgacgg-ttaatacccgt-cagt-cttgacattaactgtagaagaagcaccggctaactccgtgccagcagccgcggtaatacggagggtgcaagcgttaatcggaattactgggcgtaaagcgc-gcgtaggcggtttgataagtcggatgtgaaagccccgggctcaacctgggaattgcattcgatactgtcaggct-agagtatggtagagggaagtggaatt-ccaggtgtagcggtgaaatgcgtagagatctggaggaacatcagtggcgaagg--cgacttcctggaccaatactgacgctgaggtgcgaaagcgtgggg-agcaaacaggattagataccctggtagtccacgccgtaaacgatgtcaactagccgttggggatatt---------aaatctttagtggcgtagctaacgcgataagtt-gaccgcctggggagtacgg-cgc-aaggttaaaactcaaa-ggaattgac-gggggcccgcacaagcggtggagcatgtggtttaattcgatgcaacgcgaagaaccttacctacccttgac-atcctcagaacttgtcagagatgacttggtgccttcgggaactg-agtgacaggtgctgcatggc-tgt-cgtcagctcgtgtcgtg--agatgttgggttaagtc-ccgtaacgagcgcaacccttgtccctagttgctaaca-ttt---attgagaactctagggagactgccggtgacaaaccggaggaaggtggggatgacgtcaagtcatcatggcccttacgggtagggctacacacgtgctacaatggacggtacagagggccgcaaacc--cgcgagggggagcaaatctcataaaaccgttcgtagtccggatcggagtctgcaactcgactccgtgaagtcggaatcgctagtaatcgcgaatcagaa-tgtcgc-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 'AF481118.1.1433_Thioalkalispira_microaerophila' -----------------------------------------gcggcatgcctaac-acatgc-aagtcga?cggt??ca--------------------------gggg----------------------------------------------------------------------cttcgg-------gcccgctgacgagtggcggacgggtgagtaatgcataggaatctgtc?agt-agtgggggacaacctggggaaactcaggctaataccgcatacgccctac-----------------gggggaaagtggg-----ggacc--------ttg------g--gacctcacgctattg-gatgagcctatgtcagattagctagttggtggggtaaaggcctacc--aaggcgacgatctgtagctggtctgagaggatgatcagcaacactggtactgagacacggcccagactcctacggg-aggcagcagtg--gggaa-tattggacaatgggcgcaagcctgatccagcaatgccgcgtgtgtgaagaagg-ctgcgggttgtaaagcactttcagttgggaggaaaagctgaggc-ttaatacgcct-tagt-cttgac???accttcagaagaagcaccggctaactccgtgccagcagccgcggtaatacggagggtgcaa-cgttaatcggaattactgggcgtaaagcgc-gcgtaggtggtttgttaagtcggatgtgaaagccccgggctcaacctgggaattgcattcgatactggcagact-agagtatggtagagggaagtggaatt-ccaggtgtagcggtgaaatgcgtagagatctggaggaacaccagtggcgaagg--cggcttcctggaccaatactgacactgaggtgcgaaagcgtgggt-agcaaacaggattagataccctggtagtccacgccgtaaacgatgtcaactagttgttggagaggta---------gacctcttagtaccgcagctaacgcgataagtt-?accgcctagggagtacggccgc-aaggttRaaactcaaa-ggaattgac-gggggcccgcacaagcggtggagcatgtggtttaattcgatgcaacgcgaagaaccttacctactcttgac-atcctcagaacttgtcagagatgacttggtgccttcgggaactg-agagacaggtgctgcatggc-tgt--gtcagctcgtgtcgtg--agatgttgggttaagtc-ccgtaacgagcgcaacccttatccatagttgccagcg-agtaatgtcgggaactctatggagactgccggtgacaaaccggaggaaggtggggatgacgtcaagtcatcatggcccttacgagtagggctacacacgtgctacaatggtcggtacagagggttgccaaac--cgcaaggtggagctaatctcttaaaaccgatcgtagtccggattggagtctgcaactcgactccatgaagtcggaatcgctagtaatcgcagatcagca-tgctgcggtgaatacgttcccgggccttg-tacacaccgcccgtcacaccatgggagttggttgtaccagaagtcgctagtctaaccttc------gggaggacggtg-cccacggtgtggtc----------------------------------------------------------------- 'L25709.1.1413_Solemya_reidi_gill_symbiont' ------------tttga-tcctggctcagattgaa-cgctggcggcatgcctaac-acatgc-aagtcgaacggtaacaggc-----------------------ggag----------------------------------------------------------------------cttgct-------ctgcgctgacgagtggcggacgggtgagtaatgcatgggaatctgccatat-agtgggggacaacctggggaaacccaggctaataccgcataatctctac-----------------ggaggaaag-------------------------------g--cttcggccgctattt-gatgagctcatgtcggattagcttgttggtggggtaatggcctacc--aaggcgacgatccgtagctggtctgagaggatgatcagccacactgggactgagacacggcccagactcctacggg-aggcagcagtg--gggaa-tattggacaatgggcgaaagcctgatccagcaatgccgcgtgtgtgaagaaggcctgcgggttgtaaagcactttcagaggggaggataa----------------------------tgacgttaccctcagaagaagcaccggctaactccgtgccagcagccgcggtaatacggagggtgcaagcgttaatcggaattactgggcgtaaagcgc-gcgtaggcggttcaataagttggatgtgaaagccccgggctcaacctgggaattgcattcaaaactRttgggct-agagtttRggagaggagagcggaatt-ccaggtgtagcggtgaaatgcgtagatatctggaggaacatcagtggcgaagg--cggctctctggcctaaaactgacgctgaggtgcgaaagcgtgggt-agcgaacaggattagataccctggtagtccacgccgtaaacgatgtcaactagccgttgggaagctt---------gacttcttagtggcgcagctaacgcgataagtt-gaccgcctggggagtacggccgc-aaggctaaaactcaaa-ggaattgac-gggggcccgcacaagcggtggagcatgtggtttaattcgatgcaacgcgaagaaccttacctgcccttgac-atcctcagaacttgttagagataacttggtgccttcgggaactg-agtgacaggtgctgcatggc-tgt-cgtcagctcgtgtcgtg--agatgttgggttaagtc-ccgtaacgagcgcaacccttgtccctagttgccagca-cataatggtgggaactctagggagactgccggtgacaaaccggaggaaggtggggacgacgtcaagtcatcatggcccttatgggcagggctacacacgtgctacaatggccggtacagagggttgccaacc--tgcgaaggggagctaatctcagaaaaccggtcgtagtcYggattggagtctgcaactcgactccatgaagtcggaatcgctagtaatcgcggatcagaa-tgccgcggtgaatacgttcccgggccttg-tacacaccgcccgtcacaccatgggagtgggttgcaaaagaagtgggta??ctaaccttc------gggaggac?c---------------------------------------------------------------------------------- 'AJ223234.1.1391_Chromatium_okenii' --------agagtttga-tcatggctcagattgaa-cgctggcggtatgcctaac-acatgc-aagtcgaacgtcaa------------------------------ag----------------------------------------------------------------------gtcttc-------ggattgagtagcgtggcggacgggtgagtaaagcgtgggaatctgccttgc-agtgggggataacccggggaaactcgggctaataccgcatacgccctac-----------------gggggaaagggggc-----------------ttt----------ggctctcgttgcaa-gatgagcccacgtccgattagctagttggtagggtaaaggcctacc--aaggcgacgatcggtcgctggtctgagaggatgaccagccacactgggactgagacacggcccagactcctacggg-aggcagcagtg--gggaa-tattggacaatgggggaaaccctgatccagcaataccgcgtgtgtgaagaaggcctgcgggttgtaaagcactttcagtgggaaagaaaacctggtgg-ttaatacccat-cggc-tttgacgttactcacaaaagaagcaccggctaactccgtgccagcagccgcggtaatacggagggtgcaagcgttaatcggaattactgggcgtaaagcgc-acgtaggcggcgccgtcagtccgatgtgaaagccctgggcttaacctgggaactgcattggatactgcggcgct-agaatgtgaaagaggggagtggaatt-ccaggtgtagcggtgaaatgcgtagagatctggaggaacaccagtggcgaagg--cggctccctggttcaacattgacgctgaggtgcgaaagcgtgggt-agcaaacaggattagataccctggtagtccacgcggtaaacgatgtcgactagccgttgggtccatt-------t-aagggcttagtggcgcagctaacgcgataagtc-gaccgcctggggagtacggccgc-aaggttaaaactcaaa-ggaattgac-gggggcccgcacaagcggtggagcatgtggtttaattcgatgcaacgcgaaaaaccttaccagcccttgac-atcctcggaatcttgcagagatgtgagagtgccttcgggaaccg-agagacaggtgctgcatggc-tgt-cgtcagctcgtgtcgtg--agatgttgggttaagtc-ccgtaacgagcgcaacccttgtccttagttgccagcg-cgtcaaggcgggaactctaaggagactgccggtgataaaccggaggaaggtggggatgacgtcaagtcatcatggcccttatgggctgggctacacacgtgctacaatggccggtacagagcgtcgcgaccc--cgcgagggtgagccaatcgcagaaaaccggtcgtagtccggatcgcagtctgcaactcgactgcgtgaagtcggaatcgctagtaatcgcgaatcagca-tgtcgcggtgaatacgttcccgggccttg-tacacaccgcccgtcacac------------------------------------------------------------------------------------------------------------------------------------------- 'AGFC01000063.14993.16509_Thiocystis_violascens_DSM_198' --------agagtttga-tcctggctcagattgaa-cgctggcggcatgcctaac-acatgc-aagtcgaacgcgaa------------------------------aa----------------------------------------------------------------------ggcttt-------ggcctgagtagcgtggcggacgggtgagtaatgcgtgggaatctgcctggc-agtgggggataacccggggaaactcgggctaataccgcatacgccctac-----------------gggggaaagggggc-----------------ttc----------ggctctcgttgcca-gatgagcccacgtccgattagcttgttggcggggtaacggcccacc--aaggccgcgatcggtcgctggtctgagaggatgaccagccacactgggactgagacacggcccagactcctacggg-aggcagcagtg--gggaa-tattggacaatgggcgcaagcctgatccagcaatgccgcgtgtgtgaagaaggcctgcgggttgtaaagcactttcagtgggaaagaaaagcggctgg-ttaatacccag-tcgt-cttgacgttactcacaaaagaagcaccggctaactccgtgccagcagccgcggtaatacggagggtgcaagcgttaatcggaattactgggcgtaaagcgc-gcgtaggcggcccggtcagtccgctgtgaaagccctgggcttaacctgggaactgcagtggatactgccgcgct-agagtgtgaaagaggggggtggaatt-ccaggtgtagcggtgaaatgcgtagagatctggaggaacaccagtggcgaagg--cggccccctggttcaacactgacgctgaggtgcgaaagcgtgggg-agcaaacaggattagataccctggtagtccacgcggtaaacgatgtcgactagccgtggggtccatt-------t-aagggcttcgtggcgcagctaacgcgataagtc-gaccgcctggggagtacggccgc-aaggttaaaactcaaa-ggaattgac-gggggcccgcacaagcggtggagcatgtggtttaattcgatgcaacgcgaagaaccttaccagcccttgac-atcctcggaatcctgcggagacgcgggagtgccttcgggagccg-agagacaggtgctgcatggc-tgt-cgtcagctcgtgtcgtg--agatgttgggttaagtc-ccgtaacgagcgcaacccttgtccttagttgccagcg-cgtcatggcgggaactctaaggagactgccggtgataaaccggaggaaggtggggatgacgtcaagtcatcatggcccttatgggctgggctacacacgtgctacaatggccggtacagagggttgcgagcc--cgcgagggggagccaatcccagaaaaccggtcgtagtccggatcgcagtctgcaactcgactgcgtgaagtcggaatcgctagtaatcgcgaatcagca-tgtcgcggtgaatacgttcccgggccttg-tacacaccgcccgtcacaccatgggagttggttgcaccagaagtcgatagcctaaccttc------gggagggcgttg-accacggtgtggtcaatgactggggtgaagtcgtaacaaggtagccgtaggggaacctgcggctggatcacct------ 'CP001896.2025534.2027048_Allochromatium_vinosum_DSM_180' --------agagtttga-tcctggctcagattgaa-cgctggcggcatgcctaac-acatgc-aagtcgaacgcgaa------------------------------ag----------------------------------------------------------------------ggcttc-------ggcctgagtagagtggcggacgggtgagtaacgcatgggaatctgcctggc-agagggggataacccggggaaactcgggctaataccgcatacgccctac-----------------gggggaaagggggc-----------------ttc----------ggctctcgttgcca-gatgagcccatgtccgattagctagttggcggggtaaaggcccacc--aaggcgacgatcggtagctggtctgagaggatgaccagccacactgggactgagacacggcccagactcctacggg-aggcagcagtg--gggaa-tattggacaatgggggaaaccctgatccagcaatgccgcgtgggtgaagacggcctgcgggttgtaaagccctttcggtgggaaagaaaagcacgggg-ctaatacctcc-gtgt-attgacgttacccacagaagaagcaccggctaactccgtgccagcagccgcggtaatacggagggtgcaagcgttaatcggaatcactgggcgtaaagcgc-acgtaggcggcacggtcagtctgctgtgaaagccccgggctcaacctgggaactgcagtggatactgccgcgct-agagtgtgaaagagg-gggtggaatt-ccaggtgtagcggtgaaatgcgtagagatctggaggaacaccagtggcgaagg--cggccccctggttcaacactgacgctgaggtgcgaaagcgtgggg-agcaaacaggattagataccctggtagtccacgctgtaaacgctgtcgactagccgtttggtccatt-------t-aagggctgagtggcgcagctaacgcgctaagtc-gaccgcctggggagtacggccgc-aaggttaaaactcaaa-ggaattgac-gggggcccgcacaagcggtggagcatgtggtttaattcgatgcaacgcgaagaaccttaccagcccttgac-atcctcggaacttggcagagatgccttggtgccttcgggagccg-agagacaggtgctgcatggc-tgt-cgtcagctcgtgtcgtg--agatgttgggttaagtc-ccgtaacgagcgcaacccttgtccctagttgccagca-cttcg-ggtgggaactctagggagactgccggtgataaaccggaggaaggtggggatgacgtcaagtcatcatggcccttatgggctgggctacacacgtgctacaatggtcggtacagagcgtcgcgaagc--cgcgaggtggagccaatcgcacaaaaccgatcgtagtccggatcgcagtctgcaactcgactgcgtgaagtcggaatcgctagtaatcgcggatcagca-tgccgcggtgaatacgttcccgggccttg-tacacaccgcccgtcacaccatgggagttggttgcaccagaagtagatagcttaaccttc------gggagggcgttt-accacggtgtggtcaatgactggggtgaagtcgtaacaaggtagccgtaggggaacctgcggctggatcacct------ 'AJ006063.1.1393_Lamprocystis_roseopersicina' --------agagtttga-tcatggctcagattgaa-cgctggcggcatgcctaac-acatgc-aagtcgaacgcgaa------------------------------ag----------------------------------------------------------------------tccttt-------ggggcgagtagagtggcggacgggtgagtaatgcgtgggaatctgcctggc-agtgggggacaacccggggaaactcgggctaataccgcatacgacctac-----------------gggtgaaagggggg-----------------ttt------c--ggcctctcgctgcga-gatgagcccacgtccgattagctagttggcagggtaagagcctacc--aaggcgacgatcggtagctggtctgagaggatgatcagccacactgggactgagacacggcccagactcctacggg-aggcagcagtg--gggaa-tattggacaatgggcgcaagcctgatccagcaatgccgcgtgtgtgaagaaggcctgcgggttgtaaagcactttcagtggggaagaagcattttggg-ttaataccctg-gaat-gttgacgttacccacaaaagaagcaccggctaactccgtgccagcagccgcggtaatacggagggtgcaagcgttaatcggaatcactgggcgtaaagcgc-acgtaggcggcggcgtcagtcagatgtgaaagccccgggctcaacctgggaacggcatttgatactgcgcggct-cgagtctgctagaggggggtggaatt-ccaggtgtagcggtgaaatgcgtagatatctggaggaacaccagtggcgaagg--cggccccctggagcaagactgacgctgaggtgcgaaagcgtgggg-agcaaacaggattagataccctggtagtccacgcggtaaacgatgtcaactagccgttgggtccatt-------t-aagggcttagtggcgcagctaacgcgataagtt-gaccgcctggggagtacggccgc-aaggttaaaactcaaa-ggaattgac-gggggcccgcacaagcggtggagcatgtggtttaattcgatgcaacgcgaagaaccttaccagcccttgac-atccttggaatctggcggagacgtcggagtgccttcgggagcca-agagacaggtgctgcatggc-tgt-cgtcagctcgtgtcgtg--agatgttgggttaagtc-ccgtaacgagcgcaacccttgtccttagttgccagca-catcatggtgggaactctaaggagactgccggtgataaaccggaggaaggtggggacgacgtcaagtcatcatggcccttatgggctgggctacacacgtgctacaatggtcggtacagagggacgccaacc--cgcgagggggagccaatcccagaaaaccggtcgtagtccggattgcagtctgcaactcgactgcatgaagtcggaatcgctagtaatcgcgaatcagca-tgtcgcggtgaatacgttcccgggccttg-tacacaccgcccgtcacac------------------------------------------------------------------------------------------------------------------------------------------- 'EF999974.1.1500_Thiodictyon_bacillosum' ---------------------------agattgaa-cgctggcggcatgcctaac-acatgc-aagtcgaacgcgaa------------------------------ag----------------------------------------------------------------------cccttt-------ggggtgagtagagtggcggacgggtgagtaatgtgtgggaatctgccttgc-agtgggggacaacccggggaaactcgggctaataccgcatacgtcctac-----------------gggggaaagggggc-----------------cgc------a--aggctctcgctgcaa-gatgagcccacatccgattagctagttggcagggtaaaggcctacc--aaggcgacgatcggtagctggtctgagaggatgatcagccacactgggactgagacacggcccagactcctacggg-aggcagcagtg--gggaa-tattggacaatgggcgcaagcctgatccagcaatgccgcgtgtgtgaagaaggcctgcgggttgtaaagcactttcagtggggaagaacgccttgagg-ttaataccctt-gggg-gttgacgttacccacagaagaagcaccggctaactccgtgccagcagccgcggtaatacggagggtgcaagcgttaatcggaatcactgggcgtaaagcgt-acgtaggcggcacgatcagtcagatgtgaaagccccgggctcaacctgggaactgcatttgatactgtcgcgct-cgagtctgagagaggggggtggaatt-ccaggtgtagcggtgaaatgcgtagatatctggaggaacaccagtggcgaagg--cggccccctggctcaagactgacgctgaggtacgaaagcgtgggg-agcaaacaggattagataccctggtagtccacgctgtaaacgatgtcgactagccgttgggtccatt-------t-aagggcttagtggcgcagctaacgcgataagtc-gaccgcctggggagtacggccgc-aaggttaaaactcaaa-ggaattgac-gggggcccgcacaagcggtggagcatgtggtttaattcgatgcaacgcgaagaaccttaccagcccttgac-atccttggaatcctgcagagatgtgggagtgccttcgggagcca-agagacaggtgctgcatggc-tgt-cgtcagctcgtgtcgtg--agatgttgggttaagtc-ccgtaacgagcgcaacccttgcccttagttgccagca-cgtcatggtgggaactctaaggggactgccggtgataaaccggaggaaggtggggacgacgtcaagtcatcatggcccttatgggctgggctacacacgtgctacaatggtcggtacagagggtcgcaaacc--cgcgagggggagccaatctcacaaaaccggtcgtagtccggatcgcagtctgcaactcgactgcgtgaagtcggaatcgctagtaatcgcgaatcagca-tgtcgcggtgaatacgttcccgggccttg-tacacaccgcccgtcacaccatgggagttggttgcaccagaagtaggtagcttaaccttc------gggagggcgctt-accacggtgtggtcaatgactggggtgaagtcgtaacaaggtagccgtaggggaacctgcggctggatcacc------- 'AF112998.1.1494_Thiocapsa_roseopersicina' -------tagagtttga-tcatggctcagattgaa-cgctggcggcatgcctaac-acatgc-aagtcgaacgcgaa------------------------------ag----------------------------------------------------------------------tccttc-------ggggcgagtagagtggcggacgggtgagtaacgcatgggaatctacctcga-cgtgggggataacccggggaaactcgggctaataccgcatacgacctac-----------------gggtgaaagggggc-----------------ttc----------ggctctcgcggcga-gatgagctcatgtccgattagctagttggcggggtaaaggcccacc--aaggcgacgatcggtagctggtctgagaggatgatcagccacactgggactgagacacggcccagactcctacggg-aggcagcagtg--gggaa-tattggacaatgggcgcaagcctgatccagcaatgccgcgtgtgtgaagaaggcctgcgggttgtaaagcactttcagtggggaagaaagcctcgggg-cgaataccctc-gggg-gttgacgttacccacagaagaagcaccggctaactccgtgccagcagccgcggtaatacggagggtgcaagcgttaatcggaatcactgggcgtaaagcgc-acgtaggcggcaacgtaagtcagatgtgaaagccccgggctcaacccgggaacggcatttgagactgcgtcgct-cgagtctgagagaggggggtggaatt-ccgggtgtagcggtgaaatgcgtagagatccggaggaacaccagtggcgaagg--cggccccctggctcaagactgacgctgaggtgcgaaagcgtgggg-agcaaacaggattagataccctggtagtccacgccgtaaacgatgtcgactagccgtggggtccatt-------t-aagggcttcgtggcgcagctaacgcaataagtc-gaccgcctggggagtacggccgcaaaggttaaaactcaaagggaattgac-gggggcccgcacaagcggtggagcatgtggtttaattcgaagcaacgcgaagaaccttaccagcccttgac-atcctcggaatcctgcagagatgcgggagtgccttcgggagccg-agagacaggtgctgcatggc-tgt-cgtcagctcgtgtcgtg--agatgttgggttaagtc-ccgtaacgagcgcaacccttgcccttagttgccagcg-agtgatgtcgggaagtctaaggggactgccggtgataaaccggaggaaggtggggatgacgtcaagtcatcatggcccttatgggctgggctacacacgtgctacaatggccggtacagagggttgccaacc--cgcgagggggagccaatctcagaaaaccggtcgtagtccggatcgcagtctgcaactcgactgcgtgaagtcggaatcgctagtaatcgcgaatcagca-tgtcgcggtgaatacgttcccgggccttg-tacacaccgcccgtcacaccatgggagttggttgcaccagaagcag-tagcttaacctt-------??gagggcgctt-gccacggtgtggtcaatgactggggtgaagtcgtaacaaggtaaccgta------------------------------ 'AM748925.1.1440_Thiophaeococcus_mangrovi' --------------------------------------ctggcggcatgcct-ac-acatgc-aagtcgaacgcgaa------------------------------ag----------------------------------------------------------------------gcattc-------gtgctgagtagagtggcggacgggtgagtaatgcgtgggaatctgcctggc-agtgggggataacccggggaaactcgggctaataccgcatacgccctac-----------------gggggaaagggggc-----------------ttc----------ggctctcgttgcca-gatgagctcacgtccgattagctagttggtggggtaagggcctacc--aaggcgacgatcggtagctggtctgagaggatgaccagccacactgggactgagacacggcccagactcctacggg-aggcagcagtg--gggaattattggacaatgggggcaaccctgatccagcaatgccgcgtgtgtgaagaaggcctgcgggttgtaaagcactttcagtggggaagaaagggttggtg-ataataccgcc-gact-gttgacgttacccacagaagaagcaccggctaactccgtgccagcagccgcggtaatacggagggtgcaagcgttaatcggaatcactgggcgtaaagcgc-acgtaggcggttgagtcagtccgctgtgaaatccccgggcttaacctgggaactgcagtggatactgcttgact-cgagtctgagagaggaaggtggaatt-ccaggtgtagcggtgaaatgcgtagagatctggaggaacaccagtggcgaagg--cggccttctggctcaagactgacgctgaggtgcgaaagcgtgggg-agcaaacaggattagataccctggtagtccacgctgtaaacgctgtcgactagccgtggggctcatt-------t-aagggtttcgtggcgcagctaacgcgataagtc-gaccgcctggggagtacggccgc-aaggttaaaactcaaa-ggaattgac-gggggcccgcacaagcggtggagcatgtggtttaattcgatgcaacgcgaagaaccttaccagcccttgac-atctgacgaatcctgcagagatgtgggagtgccttcgggagcgt-caagacaggtgctgcatggc-tgt-cgtcagctcgtgtcgtg--agatgttgggttaagtc-ccgtaacgagcgcaacccttgtccttagttgccagca-cttttgggtgggaactctaaggagactgccggtgataaaccggaggaaggtggggatgacgtcaagtcatcatggcccttatgggctgggctacacacgtgctacaatggtcggtacagagggttgcgaccc--cgcgagggtgagccaatctcagaaaaccggtcgtagtccggattgcagtctgcaactcgactgcatgaagtcggaatcgctagtaatcgcgaatcagca-tgtcgcggtgaatacgttcccgggccttg-tacacaccgcccgtcacaccatgggagttggttgcaccagaagtggatagcttaaccttc------gggagagcgttt-accacggtgtga-caatgactgggt------------------------------------------------------ 'FN293057.1.1451_Thiorhodococcus_minor' -----------------------------attgaa-cgctggcggcatgcttaac-acatgc-aagtcgaacgcgaa------------------------------ag----------------------------------------------------------------------tccttc-------ggggtgagtagagtggcggacgggtgagtaacgcgtgggaatctgcctagt-ggtgggggataacccggggaaactcgggctaataccgcatacgccctac-----------------gggggaaagggggc-----------------ttc----------ggctctcgctgcta-gatgagcccacgtccgattagctagttggtggggtaaaggctcacc--aaggcgacgatcggtagctggtctgagaggatgatcagccacactgggactgagacacggcccagactcctacggg-aggcagcagtg--gggaa-tattggacaatgggcgcaagcctgatccagcaatgccgcgtgtgtgaagaaggcctgcgggttgtaaagcactttcagttgggaagaaaaggtcggtg-ttaataccatt-ggct-tttgacgttaccgacagaagaagcaccggctaactccgtgccagcagccgcggtaatacggagggtgcaagcgttaatcggaatcactgggcgtaaagcgc-acgtaggcggttgagtcagtcagctgtgaaagccccgggcttaacctgggaactgcagttgatactgctcgact-cgagtctgagagaggggggtggaatt-ccaggtgtagcggtgaaatgcgtagagatctggaggaacaccagtggcgaagg--cggccccctggcttaagactgacgctgaggtgcgaaagcgtgggg-agcaaacaggattagataccctggtagtccacgctgtaaacgctgtcgactagccgtggggctcatt-------t-aagggtttcgtggcgcagctaacgcgataagtc-gaccgcctggggagtacggccgc-aaggttaaaactcaaa-ggaattgac-gggggcccgcacaagcggtggagcatgtggtttaattcgatgcaacgcgaagaaccttaccagcccttgac-atcctcgggacttggcagagatgccttggtgccttcgggagccg-agagacaggtgctgcatggc-tgt-cgtcagctcgtgtcgtg--agatgttgggttaagtc-ccgtaacgagcgcaacccttgtccttagttgccagca-cttcg-ggtgggaactctaaggagactgccggtgataaaccggaggaaggtggggatgacgtcaagtcatcatggcccttatgggctgggctacacacgtgctacaatggtcggtacagagggtcgcgaccc--cgcgagggtgagccaatctcagaaaaccgatcgtagtccggattgcagtctgcaactcgactgcatgaagtcggaatcgctagtaatcgcgaatcagca-tgtcgcggtgaatacgttcccgggccttg-tacacaccgcccgtcacaccatgggagttggttgcaccagaagtagatagcctaaccttc------gggagggcgttt-accacggtgtggtcaatgactggggtga--------------------------------------------------- 'FN293055.1.1459_Thiococcus_pfennigii' -----------------------------attgaa-cgctggcggcatgcttaac-acatgc-aagtcgaacgcgaa------------------------------ag----------------------------------------------------------------------ggcttc-------ggcctgagtagagtggcggacgggtgagtaacgcgtgggaatctgccctgt-agtgggggacaacccggggaaactcgggctaataccgcatacgtcctac-----------------gggagaaagggggc-----------------ctctgcttgc--aagctcctgctagag-gatgagcccacgtccgattagctagttggtagggtaaaggcctacc--aaggcgacgatcggtagctggtctgagaggatgatcagccacactgggactgagacacggcccagactcctacggg-aggcagcagtg--gggaa-tattggacaatgggcgcaagcctgatccagcaatgccgcgtgtgtgaagaaggcctgcgggttgtaaagcactttcagtggggaagaaaagtctgagg-ttaataccctt-ggat-tttgacgttacccacagaagaagcaccggctaactccgtgccagcagccgcggtaatacggagggtgcaagcgttaatcggaattactgggcgtaaagggc-gcgtaggcggcgagataagtcagatgtgaaatccccgggctcaacctgggaatggcatttgatactgtttcgct-cgagtctggtagaggggggtggaatt-ccaggtgtagcggtgaaatgcgtagagatctggaggaacaccagtggcgaagg--cgaccccctgggccaagactgacgctgaggtgcgaaagcgtgggg-agcaaacaggattagataccctggtagtccacgctgtaaacgatgtcgactagccgttggatccaat-------t-aagggttgagtggcgcagctaacgcgataagtc-gaccgcctggggagtacggccgc-aaggttaaaactcaaa-ggaattgac-gggggcccgcacaagcggtggagcatgtggtttaattcgatgcaacgcgaagaaccttaccagcccttgac-atccttggaatcctgcagagatgtgggagtgccttcgggagcca-agagacaggtgctgcatggc-tgt-cgtcagctcgtgtcgtg--agatgttgggttaagtc-ccgtaacgagcgcaacccttgtccttagttgccagcg-gttcg-gccgggaactctaaggagactgccggtgataaaccggaggaaggtggggatgacgtcaagtcatcatggcccttatgggctgggctacacacgtgctacaatggtcggtacagagggttgcgaacc--cgcgagggggagccaatcccagaaaaccggtcgtagtccggattgcagtctgcaactcgactgcatgaagtcggaatcgctagtaatcgcgaatcagca-tgtcgcggtgaatacgttcccgggccttg-tacacaccgcccgtcacaccatgggagttggttgcaccagaagtcgatagcttaaccttc------gggagggcgttg-accacggtgtgatcaatgactggggtga--------------------------------------------------- 'X84316.1.1452_Rhabdochromatium_marinum' -----------------------------attgaa-cgctggcggcatgcctaac-acatgc-aagtcgaacgcga?------------------------------ag----------------------------------------------------------------------ggattc-------gtcctgagtagagtggcggacgggtgagtaacgcgtgggaatctgccctac-agtgggggacaacccggggaaacccgggctaataccgcatacgacctac-----------------gggtgaaagggggc-----------------ttt------c--gggctctcgctgaag-gatgagctcacgtccgattagctagttggtggggtaaaggcccacc--aaggcgacgatcggtagctggtctgagaggatgatcagccacactgggactgagacacggcccagactcctacggg-aggcagcagtg--gggaa-tattggacaatgggcgcaagcctgatccagcaatgccgcgtgtgtgaagaaggcctgcgggttgtaaagcactttcagtggggaagaaaaggcgggtg-ttaataccacc-ggca-cttgacgttacccacagaagaagcaccggctaactccgtgccagcagccgcggtaatacggagggtgcgagcgttaatcggaattactgggcgtaaagcgc-gcgtaggcggcttagtcagtcagatgtgaaagccctgggctcaacctgggaacggcatttgatactgctaggct-tgagtctggtagaggggggtggaatt-ccaggtgtagcggtgaaatgcgtagagatctggaggaacatcggtggcgaagg--cgaccccctggaccaagactgacgctgaggtgcgaaagcgtgggg-agcaaacaggattagataccctggtagtccacgctgtaaacgatgtcgactagccgttgggctcata-------t-aagagtttagtggcgcagctaacgcgataagtc-gaccgcctggggagtacggccgc-aaggttaaaactcaaa-ggaattgac-gggggcccgcacaagcggtggagcatgtggtttaattcgatgcaacgcgaagaaccttaccagcccttgac-atcccaagaatcctgcggagacgcgggagtgccctcgggagctt-ggagacaggtgctgcatggc-tgt-cgtcagctcgtgtcgtg--agatgttgggttaagtc-ccgtaacgagcgcaacccttgtccttagttgccagcg-gttcg-gccgggaactctaaggagactgccggtgataaaccggaggaaggtggggatgacgtcaagtcatcatggcccttatgggctgggctacacacgtgctacaatggccggtacagagggcagcgaagt--cgcgagatggagccaatcccagaaaaccggtcgtagtccggattgcagtctgcaactcgactgcatgaagtcggaatcgctagtaatcgcgaatcagca-tgtcgcggtgaatacgttcccgggccttg-tacacaccgcccgtcacaccatgggagttggttgcaccagaagtagatagcttaaccttc------gggagagcgttt-accacggtgtgatcaatgactggggtg---------------------------------------------------- 'AB016986.1.1456_Thiorhodovibrio_winogradskyi' -----------------------------attgaa-cgctggcggcatgcctaac-acatgc-aagtcgaacgcgaa------------------------------ag----------------------------------------------------------------------cccttc-------ggggtaagtagagtggcggacgggtgagtaaagcgtgggaatctgccctac-agtgggggacaacccggggaaacccgggctaataccgcatacgacctac-----------------gggtgaaagggggc-----------------ttt------c--gggctctcgctgaag-gatgagctcacgtccgattagctagttggtggggtaaaggcccacc--aaggcgacgatcggtagctggtctgagaggatgatcagccacactgggactgagacacggcccagactcctacggg-aggcagcagtg--gggaa-tattggacaatgggcgcaagcctgatccagcaatgccgcgtgtgtgaagaaggcctgcgggttgtaaagcactttcagtggggaagaaaagttgaggg-ttaatacccct-tggt-cttgacgttacccacagaagaagcaccggctaactccgtgccagcagccgcggtaatacggagggtgcaagcgttaatcggaatcactgggcgtaaagcgc-gcgtaggcggctcagtcagtcagatgtgaaagccccgggcttaacctgggaatggcatttgatactgctaagct-tgagtctggtagaggggggtggaatt-ccaggtgtagcggtgaaatgcgtagatatctggaggaacatcggtggcgaagg--cgaccccctggaccaagactgacgctgaggtgcgaaagcgtgggg-agcaaacaggattagataccctggtagtccacgctgtaaacgatgtcgactagccgttgggctcatt-------t-aagagtttagtggcgcagctaacgcgataagtc-gaccgcctggggagtacggccgc-aaggttaaaactcaaa-ggaattgac-gggggcccgcacaagcggtggagcatgtggtttaattcgatgcaacgcgaagaaccttaccagcccttgac-atcctcggaacaaggcagagatgccttggtgccttcgggagccg-agagacaggtgctgcatggc-tgt-cgtcagctcgtgtcgtg--agatgttgggttaagtc-ccgtaacgagcgcaacccttgtccttagttgccagcg-gttcg-gccgggaactctaaggagactgccggtgataaaccggaggaaggtggggatgacgtcaagtcatcatggcccttatgggctgggctacacacgtgctacaatggccggtacagagggttgcgaagc--cgcgaggtgaagccaatcccagaaaaccggtcgtagtccggattgcagtctgcaactcgactgcatgaagtcggaatcgctagtaatcgcgaatcagca-tgtcgcggtgaatacgttcccgggccttg-tacacaccgcccgtcacaccatgggagttggttgcaccagaagtagatagcttaaccttc------gggagggcgttt-accacggtgtgatcaatgactggggtgaagt------------------------------------------------ 'AJ002796.1.1424_Thiohalocapsa_halophila' -----------------------------attgaa-cgctggcggcatgcctaac-acatgc-aagtcgaacgcgaa------------------------------ag----------------------------------------------------------------------ctcttc-------ggagtgagtagagtggcggacgggtgagtaacgcgtgggaatctgccctgt-agtaggggacaacccggggaaactcgggctaataccgcatacgtcctac-----------------gggagaaagagggc-----------------ctt------c--gggctctcgctgcag-gatgagcccgcgtccgattagctagttggtagggtaatggcctacc--aaggcgacgatcggtagctggtctgagaggatgatcagccacactgggactgagacacggcccagactcctacggg-aggcagcagtg--gggaa-tattggacaatgggcgcaagcctgatccagcaatgccgcgtgtgtgaagaaggcctgcgggttgtaaagcactttcagtggggaagaaaagcctgggg-ttaataccccc-gggt-cttgacgttacccacagaagaagcaccggctaactccgtgccagcagccgcggtaatacggagggtgcaagcgttaatcggaatcactgggcgtaaagcgc-acgtaggcggcgaagtcagtcagatgtgaaagccctgggctcaacctgggaactgcatttgatactgcttggct-cgagtctggtagaggggggtggaatt-ccaggtgtagcggtgaaatgcgtagatatctggaggaacatcagtggcgaagg--cggccccctggaccaagactgacgctgaggtgcgaaagcgtgggg-agcaaacaggattagataccctggtagtccacgccgtaaacgatgtcgactagccgttgggctcatt-------t-aagggtttagtggcgcagcaaacgcgataagtc-gaccgcctggggagtacggccgc-aaggttaaaactcaaa-ggaattgac-gggggcccgcacaagcggtggagcatgtggtttaattcgatgcaacgcgaagaaccttaccagcccttgac-atcctcggaacttggcagagatgccttggtgccttcgggagccg-agagacaggtgctgcatggc-tgt-cgtcagctcgtgtcgtg--agatgttgggttaagtc-ccgtaacgagcgcaacccttgtccttagttgccagcg-gttcg-gccgggaactctaaggagactgccggtgataaaccggaggaaggtggggatgacgtcaagtcatcatggcccttatgggctgggctacacacgtgctacaatggtcggtacagagggctgcgaagc--agcgatgtggagccaatcccagaaaaccgatcgtagtccggattgcagtctgcaactcgactgcatgaagtcggaatcgctagtaatcgcgaatcagca-tgtcgcggtgaatacgttcccgggccttg-tacacaccgcccgtcacaccatgggagttggttgcaccagaagtggatagcttaaccttc------gggagggcgtt--------------------------------------------------------------------------------- 'AJ006212.1.1402_Lamprocystis_purpurea' ---------------------------------------------------taaa-acatgc-aagttgaacgcgaa------------------------------ag-----------------------------------------------------------------------tcttc-------ggagtgagtagagtggcggacgggtgagtaacgcgtgggaatctgccttgt-agtgggggacaacccggggaaactcgggctaataccgcatacgtcctac-----------------gggagaaagggggc-----------------ttc----------ggctctcgctgcaa-gatgagcccgcgtccgattagcttgttggtggggtaaaggcctacc--aaggcgacgatcggtagctggtctgagaggatgatcagccacactgggactgagacacggcccagactcctacggg-aggcagcagtg--gggaa-tattggacaatgggcgcaag-ctgatccagcaatgccgcgtgtgtgaagaaggcctgcgggttgtaaagcactttcagtggggaagaaaagcgcaggg-ttaatacccct-gaDt-cttgacgttacccacagaagaagcaccggctaactccgtgccagcagccgcggtaatacggagggtgcaagctttaatcggaatcactgggcgtaaagcgc-acgtaggcggcgaagtcagtcagatgtgaaagccccgggctcaacctgggaactgcattt?atactgcttggct-cgagtctggtagaggggggtggaatt-ccaggtgtagcggtgaaatgcgtagatatctggaggaacaccagtggcgaagg--cggccccctggaccaagactgacgctgaggtgcgaaag-gtgggg-agcaaacaggattagataccctggtagtccacgccgtaaacgatgtcgactagccgttgggctcatt-------t-tatggcttagtggcgcag-aaacgcgataagtc-gaccg-ctggggagtacggccgc-aag--ttatactcaaa-ggaattcacggggggcccgcacaagcggtggagcatgtggtttaattcgatgcaacgcgaagaaccttaccagcccttgac-atcctcggaacttggcagagatgccttggtgccttcgggagccg-agagacaggtgctgcatggc-tgt-cgtcagctcgtgtcgtg--agatgttgggttaagtc-ccgtaacgagcgcaacccttgtccttagttgccagcg-agtaaagtcgggaactctaaggagactgccggtgataaaccggaggaaggtggggatgacgtcaagtcatcatggcccttatgggctgggctacacacgtgctacaatggtcggtacagagggctgcgaagc--agcgatgtggagctaatcccagaaaaccgatcgtagtccggattgcagtctgcaactcgactgcatgaagtcggaatcgctagtaatcgcgaatcagca-tgtcgcggtgaatacgttcccgggccttg-tacacaccgcccgtcacaccatgggagttggttgcaccagaagtagatagcttaaccttc------ggga-ggcgttt-accacg------------------------------------------------------------------------- 'X93472.1.1451_Halochromatium_glycolicum' -----------------------------attgaa-cgctggcggcatgcctaac-acatgc-aagtcgaacgcgaa------------------------------ag----------------------------------------------------------------------cccttc-------ggggtgagtagagtggcggacgggtgagtaacgcgtgggaatctgccctgt-agtggggaacaacccggggaaactcgggctaataccgcatacgtcctac-----------------gggagaaagggggc-----------------ctt------c--gggctctcgctgcag-gatgagcccacgtccgattagcttgttggtggggtaatggcctacc--aaggcgacgatcggtagctggtctgagaggatgatcagccacactgggactgagacacggcccagactcctacggg-aggcagcagtg--gggaa-tattggacaatgggcgaaagcctgatccagcaatgccgcgtgtgtgaagaaggcctgcgggttgtaaagcactttcagtggggaagaaaagcctgggg-ttaatacccct-gggt-cttgacgttacccacagaagaagcaccggctaactccgtgccagcagccgcggtaatacggagggtgcaagcgttaatcggaatcactgggcgtaaagcgc-acgtaggcggtgaagtcagtcagatgtgaaagccccgggctcaacctgggaattgcatttgatactgcttgact-tgagtatggtagagggaggtggaatt-ccaggtgtagcggtgaaatgcgtagatatctggaggaacaccagtggcgaagg--cggcctcctggaccaatactgacgctgaggtgcgaaagcgtgggg-agcaaacaggattagataccctggtagtccacgccgtaaacgatgtcgactagccgttggatccatt-------t-aagggtttagtggcgcagctaacgcgataagtc-gaccgcctggggagtacggccgc-aaggttaaaactcaaa-ggaattgac-gggggcccgcacaagcggtggagcatgtggtttaattcgatgcaacgcgaagaaccttaccagcccttgac-atccttggaac-tgtcagagatgac-aggtgccttcgggagcca-agtgacaggtgctgcatggc-tgt-cgtcagctcgtgtcgtg--agatgttgggttaagtc-ccgtaacgagcgcaacccttgtccttagttgccagcg-gttcg-gccgggaactctaaggagactgccggtgataaaccggaggaaggtggggatgacgtcaagtcatcatggcccttatgggctgggctacacacgtgctacaatggtcggcacagagggtcgcgaagc--cgcgaggtggagctaatcccagaaaaccgatcgtagtccggattgcagtctgcaactcgactgcatgaagtcggaatcgctagtaatcgcgaatcagca-tgtcgcggtgaatacgttcccgggccttg-tacacaccgcccgtcacaccatgggagttggctgcaccagaagtagatagcttaaccttc------gggagggcgttt-accacggtgtggttaatgactggggtga--------------------------------------------------- 'AF328856.1.1497_Olavius_algarvensis_Gamma1_endosymbiont' --------agagtttga-tcctggctcagattgaa-cgctggcggcatgcctaac-acatgc-aagtcgaacgcgaa------------------------------cg----------------------------------------------------------------------ccccttc-----gggggtaagtagagtggcggacgggtgagtaacgcgtgggaatctgcctcgt-agtaggggacaacccggggaaactcgggctaataccgcatacgtcctat-----------------gggagaaagggggc-----------------ctctgcttgc--atgctctcgctatga-gatgagcccgcgtccgattagcttgttggtggggtaaatgcctacc--aaggcgatgatcggtagctggtctgagaggatgatcagccacactgggactgagacacggcccagactcctacggg-aggcagcagtg--gggaa-tattggacaatgggcgcaagcctgatccagcaatgccgcgtgtgtgaagaaggcctgcgggttgtaaagcactttcagtcgggaagaaagatctcgag-ttaatagctcg-gggc-cttgacgttatcgacagaagaagcaccggctaactccgtgccagcagccgcggtaatacggagggtgcaagcgttaatcgaaatcactgggcgtaaagcgc-gcgtaggcggccggataagtcagatgtgaaagccccgggctcaacctgggaattgcgtttgatactgtccggct-agagtgtggtagaggggggtggaatt-ccaggtgtagcggtgaaatgcgtagatatctggaggaacatcggtggcgaagg--cgaccccctggaccaatactgacgctgaggtgcgaaagcgtgggg-agcaaacaggattagataccctggtagtccacgccgtaaacgatgtcgactagccgttgggctcatt-------t-aagggtttagtggcgcagctaacgcgataagtc-gaccgcctggggagtacggccgc-aaggttaaaactcaaa-ggaattgac-gggggcccgcacaagcggtggagcatgtggtttaattcgatgcaacgcgaagaaccttaccagcccttgac-atcctgtgaactttctagagatagatcggtgccttcgggaacac-agtgacaggtgctgcatggc-tgt-cgtcagctcgtgtcgtg--agatgttgggttaagtc-ccgtaacgagcgcaacccttgtccttagttgccagcg-gttcg-gccgggaactctaaggagactgccggtgataaaccggaggaaggtggggatgacgtcaagtcatcatggcccttatgggctgggctacacacgtgctacaatgggcggtacagagggttgcgaagc--ggcgacgtggagccaatcccagaaaaccggtcgtagtccggattgcagtctgcaactcgactgcatgaagtcggaatcgctagtaatcgcagatcagaa-cgctgcggtgaatacgttcccgggccttg-tacacaccgcccgtcacaccatgggagttggttgcaccagaagtaggtagcttaaccttc------gggagggcgctt-accacggtgtggtcaatgactggggtgaagtcgtaacaaggtaa----------------------------------- 'AJ620507.1.1497_Olavius_crassitunicatus_Gamma1_endosymbiont' --------agagtttga-tcctggctcagattgaa-cgctggcggcatgcctaac-acatgc-aagtcgaacgcgaa------------------------------ag----------------------------------------------------------------------ccccttc-----gggggcgagtagagtggcggacgggtgagtaacgcgtgggaatctacctcgt-agtgggggataacccggggaagctcgggtcaataccgcatacgtcctac-----------------gggagaaagggggc-----------------ctctgtctgt--atgctcctgctatga-gatgagcctgcgtccgattagcttgttggtggggtaaatgcctacc--aaggcaatgatcggtagctggtctgagaggatgatcagccacactgggactgagatacggcccagactcctatggg-aggcagcagtg--gggaa-tattggacaatgggcgcaagcctgatccagcaatgccgcgtgtgtgaagaaggcctgcgggttgtaaagcactttcagttgggaggaaatgccttggg-ttaatacccca-gggt-cttgacgttaccaacagaagaagcaccggctaactccgtgccagcagccgcggtaatacggagggtgcgagcgttaatcggaattactgggcgtaaagcgc-gcgcaggcggtcggataagtcagatgtgaaagccccgggctcaacctgggaattgcgtttgatactgttcggct-agagtatggtagaggggggtggaatt-ccaggtgtagcggtggaatgcgtagatatctggaggaacaccagtggcgaagg--cgaccccctggaccaatactgacgctgaggcgcgaaagcgtgggg-agcaaacaggattagataccctggtagtccacgccgtaaacgatgtcgactagccgttggactcatt-------t-gagggtttagtggcgcagctaacgcgataagtc-gaccgcctggggagtacggccgc-aaggctaaaactcaaa-ggaattgac-gggggcccgcacaagcggtggagcatgtggtttaattcgatgcaacgcgaagaaccttaccagcccttgac-atcccgcgaactgtctagagatagacgggtgccttcgggagcgc-ggtgacaggtgctgcatggc-tgt-cgtcagctcgtgtcgtg--agatgttgggttaagtc-ccgtaacgagcgcaacccttgtccttagttgccagcg-gttcggccggggaactctaaggagactgccggtgataaaccggaggaaggtggggatgacgtcaagtcatcatggcccttatgggctgggctacacacgtgctacaatgggcggcacagagggttgcgaagc--ggcgacgtggagctaatcccagaaagccggtcgtagtccggattgcagtctgcaactcgactgcatgaagtcggaatcgctagtaatcgcagatcagaa-tgctgcggtgaatacgttcccgggccttg-tacacaccgcccgtcacaccatgggagtcggttgcaccagaagtgggtagcttaaccttc------gggagggcgctc-accacggtgtggttgacgactggggtgaagtcgtaacaaggta------------------------------------ 'EU439003.1.1869_Candidatus_Thiobios_zoothamnicoli' --------agagtttga-tcatggctcagattgaa-cgctggcggcatgcttaac-acatgc-aagtcgaacgcgaaagcg--------------------------------------------------------------------------------------------------ctttcg-------ggcgttagtagagtggcggacgggtgagtaacgcgtgggaatctgcctgat-agtgggggataactcggggaaactcgagctaataccgcatacgccctac-----------------gggggaaag-------------------------------a--cttcggtcactatca-gatgagcccgcgtcagattagcttgttggtggggtaatggctcacc--aaggcaacgatctgtagctggtctgagaggacgaacagccacactgggactgagacacggcccagactcctacggg-aggcagcagtg--aggaa-tattgcacaatgggggaaaccctgatgcagcaatgccgcgtgtgtgaagaaggcctgcgggttgtaaagcactttcagttgggaagataa----------------------------tgacgttaccaacagaagaagcaccggctaactccgtgccagcagccgcggtaatacggagggtgcaagcgttaatcggaattactgggcgtaaagcgc-gcgtaggcggctaggtcagtcagatgtgaaatccccaggctcaacctgggaattgcatttgatactgcttggct-agagtatggtagagggtggtggaatt-ccaggtgtagcggtgaaatgcgtagatatctggaggaacatcagtggcgaagg--cggccacctggattaatactgacgctgaagtgcgaaagcgtggggaagcaaacaggattagataccctggtagtccacgccgtaaacgatgtcaactagccgttgggtttt---------t-ataaatttagtggcgtacgtaacgcgataagtt-gaccgcctggggagtacggccgc-aaggttaaaactcaaa-ggaattgac-gggggcccgcacaagcggtggagcatgtggtttaattcgatgcaacgcgaagaaccttaccagttcttgac-atccagtgaactttccagagatggattggtgccttcgggaacac-tgtgacaggtgctgcatggc-tgt-cgtcagctcgtgtcgtg--agatgttgggttaagtc-ccgtaacgagcgcaacccttgtccttagttgccagca-cttcg-ggtgggaactctaaggagactgccggtgacaaaccggaggaaggtggggatgacgtcaagtcatcatggcccttatgaactgggctacacacgtgctacaatggacggtacagagggccgcaaacc--cgcgagggggagctaatcccaaaaaaccgttcgtagtccggattgcagtctgcaactcgactgcatgaagtcggaatccctagtaatcgcagatcagaa-tgctgcggtgaatacgttcccgggccttg-tacacaccgcccgtcacaccatgggagtgggttgcgaaagaagtgggtagcttaat-----------aatgggcgctc-accactttgtgattcatgactggggtgaagtcgtaacaaggtagccgtaggggaacctgcggctggatcacctccttt- 'AB214932.1.1414_Alviniconcha_hessleri_gill_endosymbiont' ---------------------------------------------------------------aagtcgaacgcgaaacactc------------------------------------------------------------------------------------------------cttcgg-------gagtggagtagagtggcggacgggtgagtaacgcgtaggaatctgcctggt-agtgggggatagcccggagaaatccggattaataccgcatacgccttac-----------------gagggaaagagggcc---tctcc--------ttg------g--aagctctcgctatca-gatgagcctgcgtcggattagcttgttggtggggtaatggcctacc--aaggcgacgatccgtagctggtctgagaggacgatcagccacactgggactgagacacggcccagactcctacggg-aggcagcagtg--gggaa-tattggacaatgagcgaaagcttgatccagcaatgccgcgtgtgtgaagaaggcctgcgggttgtaaagcactttcagtggggaagaaaagcgcgggg-ctaataccccc-gtgt-cttgacgttacccacagaagaagcaccggctaactccgtgccagcagccgcggtaatacggagggtgcgagcgttaatcggaattactgggcgtaaagcgc-gcgtaggcggcctggtcagtcagatgtgaaagccctgggcttaacctgggaactgcatttgatactgccaggct-agagtatggtagagggaagtggaatt-ccgggtgtagcggtgaaatgcgtagatatccggaggaacaccagtggcgaagg--cggcttcctggaccaatactgacgctgaggtgcgaaagcgtgggg-agcaaacaggattagataccctggtagtccacgccgtaaacgatgtcaactagccgttgggctcatt-------t-aagggcttagtggcgcagctaacgcgataagtt-gaccgcctggggagtacggccgc-aaggttaaaactcaaa-ggaattgac-gggggcccgcacaagcggtggagcatgtggtttaattcgatgcaacgcgaagaaccttaccagcccttgac-atcccgggaatcctccagagatggaggagtgccttcgggaaccc-ggtgacaggtgctgcatggc-tgt-cgtcagctcgtgtcgtg--agatgttgggttaagtc-ccgtaacgagcgcaacccttgtccttagttgccagcg-agtaatgtcgggaactctaaggagactgccggtgacaaaccggaggaaggtggggatgacgtcaagtcatcatggcccttatgggctgggctacacacgtgctacaatggtcggtacagagggttgccaacc--cgcgagggggagccaatcccagaaaaccgatcgtagtccggattgcggtctgcaactcgaccgcatgaagtcggaatcgctagtaatcgcgaatcagaa-tgtcgcggtgaatacgttcccgggccttg-tacacaccgcccgtcacaccatgggagtgggctgcaccagaagtggctagtctaaccgct------tgccggaggacc------ggtccaccc----------------------------------------------------------------- 'AB238964.1.1409_endosymbiont_of_Ifremeria_nautilei' ----------------------------------------------------------------agtcgaacgcgaaag--------------------------agat----------------------------------------------------------------------cttcgg-------atcttgagtagagtggcggacgggtgagtaacgcgtaggaatctgcctagt-agtgggggatagcccggagaaatccggattaataccgcatacgccctac-----------------gggggaaagatggcc---tcttc--------ttg------a--aagctatcactatta-gatgagcctgcgtcggattagctagttggtgaggtaatggctcacc--aaggcgacgatccgtagctggtctgagaggacgatcagccacactgggactgagacacggcccaggctcctacggg-aggcagcagtg--gggaa-tattggacaatgagcgaaagcttgatccagcaataccgcgtgtgtgaagaaggcctgcgggttgtaaagcactttcagtggggaagaaaagcttaagg-ttaataccctt-gagt-cttgacgttacccacagaagaagcaccggctaactccgtgccagcagccgcggtaatacggagggtgcaagcgttaatcggaattactgggcgtaaagcgc-gcgtaggcggtttagtcagtcagatgtgaaagccccgggctcaacctgggaactgcatttgatactgctgaact-agagtatggtagagggaagtggaatt-ccgggtgtagcggtgaaatgcgtagatatccggaggaacaccagtggcgaagg--cgacttcctggaccaatactgacgctgaggcgcgaaagcgtgggt-agcaaacaggattagataccctggtagtccacgccgtaaacgatgtcaactagccgttgggctcattt------t-aagggcttagtggcgcagctaacgcgataagtt-gaccgcctggggagtacggtcgc-aagattaaaactcaaa-ggaattgac-gggggcccgcacaagcggtggagcatgtggtttaattcgatgcaacgcgaagaaccttaccagcccttgac-atcctgggaaggctttagagataaagctgtgccttcgggaaccc-agtgacaggtgctgcatggc-tgt-cgtcagctcgtgtcgtg--agatgttgggttaagtc-ccgtaacgagcgcaacccctgtccttagttgccagcg-agtaatgtcgggaactctaaggagactgccggtgacaaaccggaggaaggtggggatgacgtcaagtcatcatggcccttatgggctgggctacacacgtgctacaatggccggtacagagggttgccaacc--cgcgagggggagctaatcccagaaaaccggtcgtagtccggattggagtctgcaactcgactccatgaagtcggaatcgctagtaatcgcgaatcagaa-tgtcgcggtgaatacgttcccgggccttg-tacacaccgcccgtcacaccatgggagtgggttgcaaaagaagtgggtagtctaaccttcc-----gggagggcgctc---cac-------------------------------------------------------------------------- 'AB245479.1.1457_Sulfurivirga_caldicuralii' -------tagagtttga-tcctggctcagaatgaa-cgctggcggcaggcctaag-acatgc-aagtcgagcggtaacagagg----------------------ggag----------------------------------------------------------------------cttgctc------ccctgctgacgagcggcgaacgggtgagtaacacgtgggaacctgccctct-ggttggggataacctggggaaacccaggctaataccgaataagctctac-----------------ggaggaaagtggg-----cctctg------cttg------c--aagctcacgccagag-gatgggcccgcggcggattagctagttggtgaggtaacggctcacc--aaggcgacgatccgtagctggtctgagaggatgatcagccacactgggactgagacacggcccagactcctacggg-aggcagcagtc--gggaa-tattggacaatgggcgaaagcctgatccagccatgccgcgtgtgtgaagaaggcctgagggttgtaaagcactttcagcagggaggaaaagcgtaggg-ttaatacccct-gcgt-cttgacgttacctgcagaagaagcaccggctaactctgtgccagcagccgcggtaatacagagggtgcgagcgttattcggaattactgggcgtaaagcgc-gcgtaggcggatttgcaagtcgggtgtgaaagccccgggctcaacctgggaactgcatccgagactgcaagtct-agagtacggtagagggtagcggaatt-cctagtgtagcggtgaaatgcgtagatattaggaggaacaccagtggcgaagg--cggctacctggaccgatactgacgctgaggtgcgaaagcgtgggg-agcaaacaggattagataccctggtagtccacgccctaaacgatgtcgactagctgttgggctcatt-------t-aagggctcagtagcgtagctaacgcgttaagtc-gaccgcctggggagtacggccgc-aaggttaaaactcaaa-ggaattgac-gggggcccgcacaagcggtggagcatgtggtttaattcgatgcaacacgaagaaccttaccctcccttgac-atccccggaaggcgccagagatggcgctgtgccttcgggaaccg-ggtgacaggtgctgcatggc-tgt-cgtcagctcgtgtcgtg--agatgttgggttaagtc-ccgcaacgagcgcaacccttgccgttagttgccatcg-ggtcatgccgggcactctaacgggactgccggtgataaaccggaggaaggcggggacgacgtcaagtcatcatggcccttatgggaggggctacacacgtgctacaatgggcaggacaaagggtagccaacc--cgcgagggggagccaatcccaaaaacctgctcgtagtccggattgcagtctgcaactcgactgcatgaagtcggaatcgctagtaatcgcgaatcagctatgtcgcggtgaatacgttcccgggccttg-tacacaccgcccgtcacaccatgggagtgggctgcaccagaagtggctagtctaaccttc------gggagg-------------------------------------------------------------------------------------- 'AB266389.1.1525_Thioprofundum_hispidum' -------------ttga-tcctggctcagattgaa-cgctggcggcatgcctaac-acatgc-aagtcgaacggtaacaggca---------------------aaaag----------------------------------------------------------------------cttgctt-----tttgcgctgacgagtggcggacgggtgagtaacgcgtaggaatctgcccgat-agtgggggacaacctggggaaacccaggctaataccgcatacgccctac-----------------gggggaaaggtggcc---tctcc--------ttg------g--aagctaccgctatcg-gatgagcctgcgtcggattagcttgttggtgaggtaatggctcacc--aaggcgacgatccgtagctggtctgagaggacgatcagccacactgggactgagacacggcccagactcctacggg-aggcagcagtg--gggaa-tattggacaatgggggcaaccctgatccagcaatgccgcgtgtgtgaagaaggcctgcgggttgtaaagcactttcagtagggaagaaaagctcaagg-ccaataccctt-gagt-cttgacgttacctacagaagaagcaccggctaactccgtgccagcagccgcggtaatacggagggtgcaagcgttaatcggaattactgggcgtaaagcgc-gcgtaggcggtttggtaagtcggatgtgaaagccccgggctcaacctgggaattgcattcgatactgccaggct-agagtatggtagagggaagtggaatt-ccgggtgtagcggtgaaatgcgtagatatccggaggaacaccagtggcgaagg--cgacttcctggaccaatactgacgctgaggtgcgaaagcgtgggg-agcaaacaggattagataccctggtagtccacgccgtaaacgatgtcaactagccgttggggatatt-------agaaatccttagtggcgcagctaacgcgataagtt-gaccgcctggggagtacggccgc-aaggttaaaactcaaa-ggaattgac-gggggcccgcacaagcggtggagcatgtggtttaattcgatgcaacgcgaagaaccttaccaccccttgac-atcctcggaatcctccagagatggaggagtgccttcgggaaccg-agtgacaggtgctgcatggc-tgt-cgtcagctcgtgtcgtg--agatgttgggttaagtc-ccgtaacgagcgcaacccttgtccctagttgccagcg-gttcg-gccgggaactctagggagactgccggtgacaaaccggaggaaggtggggatgacgtcaagtcatcatggcccttacggggtgggctacacacgtgctacaatgggcggtacagagggttgccaacc--cgcgagggggagccaatcccagaaaaccgttcatagtccggattgcagtctgcaactcgactgcatgaagtcggaatcgctagtaatcgcgaatcagaa-tgtcgcggtgaatacgttcccgggccttg-tacacaccgcccgtcacaccatgggagtgggttgcaccagaagtggctagtctaaccttc------gggaggacggtc-accacggtgtgattcatgactggggtgaagtcgtaacaaggtagccgtaggggaacctgcggctgga------------ 'X87277.1.1516_Leucothrix_mucor' --------agagtttga-t??tggctcagattgaa-cgctggcggcatgcttaac-acatgc-aagtcgaacggtaacagg------------------------ctag----------------------------------------------------------------------cttgct--------agtgctgacgagtggcggacgggtgagtaacgcgtaggaatctacccagt-tgtgggggatagcccggagaaatccggattaataccgcatacg-cctac-----------------gggggaaaacagg-----ggatc--------ttc------g--gaccttgtgcaattg-gatgagcctgcgttagattagctagttggtggggtaaaggcctacc--aaggcgacgatctatagctggtctgagaggatgatcagccacatcgggactgagacacggcccggactcctacggg-aggcagcagtg--gggaa-tattggacaatgggcgcaagcctgatccagcaatgccgcgtgtgtgaagaaggccttcgggttgtaaagcactttcaattgtgaagaaggggtttgtg-ttaatagcgcg-gatc-tct?acgttaactttagaagaagcaccggctaactccgtgccagcagccgcggtaatacggagggtgcaagcgttaatcggaattactgggcgtaaagcgc-gcgtaggcggttgtttaa-tcagatgtgaaagccccgggctcaacctgggaatggcctctgatactggataact-agagtttgggagaggggagtagaatt-tcaggtgtagcggtgaaatgcatagatatctgaaggaataccagtggcgaagg--cgactccctggcctaaaactgacgctgaggtgcgaaagcgtgggt-agcaaacaggattagataccc-ggtagtccacgtcgtaaacgtagtcaactagccgttgggactctt---------gaagtcttagtggtgcagctaacgcattaagtt-gaccgcctggggagtacggtcgc-aagactaaaactcaaa-ggaatgacg-ggggccctgcacaagcggtggagcatgtggtttaattcgatgcaacgcgaagaaccttaccatctcttgac-atctagagaatctgttagagatagtagagtgcctttgggaactc-tgagacaggtgctgcatggc-tgt-cgtcagctcgtgtcgtg--agatgttgggttaagtc-ccgcaacgagcgcaacccctatccttggttgccagca-cataatggtgggaactccaaggagactgccggtgacaaaccggaggaaggtggggatgacgtcaagtcatcatgg-ccggacgggatgggctacacacgtgctacaatggccggtacagagggtcgcaaccc--cgcgagggtgagctaatcccacaaagccggtcgtagtccggatcggagtctgcaactcgactccgtgaagttggaatcgctagtaatcgtggatcagaa-tgccacggt?aatacgttcccgggccttg-tacacaccgcccgtcacaccatgggagttgggttgcataaagttagttagcttaaccttc------????ggtcgctt-accactttcatattcatgactggggt?aagtcgtaacaaggtagccgtaggg??a-----------atcacctcctt-- 'FN658699.1.1505_gamma_proteobacterium_ectosymbiont_of_Rimicaris_exoculata' --------agagtttga-tcctggctcagattgaa-cgctggcggcatgcttaac-acatgc-aagtcgaacggaaacgcga-----------------------ggag----------------------------------------------------------------------cttgct-------ctttggcgtcgagtggcggacgggtgagtaacgcgtgggaatctactcagt-agtgggggatagccaggagaaattctgattaataccgcatacgatctac-----------------ggatgaaaggtgg-----cctcta------catg------t--aagctatcgctattg-aatgagcccgcgttagattagctagttggtagggtaaaggcctacc--aaggcgacgatctatagctggtctgagaggacgaccagccacatcgggactgagacacggcccggactcctacggg-aggcagcagtg--gggaa-tattggacaatgggcgcaagcctgatccagcaatgccgcgtgtgtgaagaaggcctgagggttgtaaagcactttcaattgtgaagaagagattaaga-ttaatactttt-gatc-tttgacgttaactttagaagaagcaccggctaactctgtgccagcagccgcggtaatacagagggtgcgagcgttaatcggaattactgggcgtaaagcgc-gcgtaggcggttagataagtcagatgtgaaatccccgggctcaacctgggaactgcatctgatactgtttaact-agagtttgggagagggaagtagaatt-tcaggtgtagcggtgaaatgcatagagatctgaaggaataccagtggcgaagg--cgacttcctggcctaaaactgacgctgaggtgcgaaagcgtgggt-agcaaacgggattagataccccggtagtccacgccgtaaacgatgtcaactagtcgttggtctcctt---------gagggatcagtgacgcagctaacgcattaagtt-gaccgcctggggagtacggtcgc-aagactaaaactcaaa-ggaattgac-gggggcccgcacaagcggtggagcatgtggtttaattcgatgcaacgcgaagaaccttaccatcccttgac-atcctcagaacttgtaagaaattacttggtgccttcgggaactg-agtgacaggtgctgcacggc-tgt-cgtcagctcgtgtcgtg--agatgttgggttaagtc-ccgcaacgagcgcaacccctatccttggttgctagca-ggtaatgctgagaactccaaggagactgccggtgacaaaccggaggaaggtggggatgacgtcaagtcatcatggcccttatgggatgggctacacacgtgctacaatggtcggtacagagggttgcgaact--cgcgagagcaagctaatcccagaaagccgatcgtagtccggattggagtctgcaactcgactccatgaagttggaatcgctagtaatcgcggatcagaa-tgccgcggtgaatacgttcccgggccttg-tacacaccgcccgtcacaccatgggagtgggctgcaaaagaagtaggtaggctaaccttc------gggaggccgctt-accactttgtggttcatgactggggtgaagtcgtaacaaggtagccg-------------------------------- 'AB042545.1.1417_Thiothrix_flexilis' -----------------------------attgaa-cgctggcggtatgcttaag-acatgc-aagtcgaacggtag-------------------------------------------------------------------------------------------------------tccct-------tcggggatgagagtggcgcacgggtgagtaacacgtgggaatctacccagt-agcgggggatagcctggagaaatccagattaataccgcatacgctctac-----------------ggaggaaag-------------------------------g--cttcggccactattg-gatgagcccgcgttggattaggtagttggtgaggtaaaggctcacc--aagcctgcgatccatagctggtctgagaggatgatcagccacatcggaactgagacacggtccggactcctacggg-aggcagcagtc--gggaa-tattggacaatgggcgcaagcctgatccagcaataccgcgtgtgtgaagaaggcctgcgggttgtaaagcactttcgctagggacgataa----------------------------tgacggtacctagataagaagcaccggctaactccgtgccagcagccgcggtaatacggagggtgcaagcgttaatcggaattactgggcgtaaagcgc-gcgtaggtggtttattaagtcagatgtgaaatccctgggctcaacctaggcactgcatctgatactggtagact-agaatgtgggagagggaagtggaatt-tccggtgtagcggtgaaatgcatagagatcggaaggaacatcagtggcgaagg--cgacttcctggaccaacattgacactgaggtgcgaaggcgtgggt-agcaaacaggattagataccctggtagtccacgcggtaaacgatgtcaactagccgttgggttcgat-------t-taggattcagtggtgcagctaacgcattaagtt-gaccgcctggggagtacgctcgc-aagagtaaaactcaaa-ggaattgac-gggggcccgcacaagcggtggagcatgtggtttaattcgatgcaacgcgaagaaccttaccagcccttgac-atggcaggaatccctgagagattggggagtgccgcaaggaacct-gcacacaggtgctgcatggc-tgt-cgtcagctcgtgtcgtg--agatgttgggttaagtc-ccgcaacgagcgcaacccctgtccctagttgccagca-cgtaaaggtgggaactctagggagactgccggtgacaaaccggaggaaggtggggatgacgtcaagtcatcatggcccttacgggctgggctacacacgtgctacaatggccagtacagagggacgcgagac--cgcgaggtggagcaaatcccagaaagctggtcgtagtccggattggagtctgcaactcgactccatgaagttggaatcgctagtaatcgcgaatcagaa-cgtcgcggtgaatacgttcccgggccttg-tacacaccgcccgtcacaccatgggagtttgttgcaccagaagcaggtagcttaaccgaa------aggagggcgctt-gccacggtgtggccgatgactggggtg---------------------------------------------------- 'AJ620496.1.1501_Olavius_algarvensis_Gamma_3_endosymbiont' --------agagtttga-tcctggctcagattgaa-cgctggcggtatgcttaac-acatgc-aagtcgaacggtagcgcgg-----------------------agag----------------------------------------------------------------------cttgct-------ctctggcgacgagtggcggacgggtgcgtaacgcgtgggaatctacctttt-agtgggggatagcccggagaaatccggattaataccgcataatctctac-----------------ggagcaaagtggg-----ggatc--------ttc------g--gacctcacgctatta-gatgggcccgcgttagattagcttgttggtgaggtaatggctcacc--aaggcaacgctctatagctggtttgagaggatgatcagccacactgggactgagacacggcccagactcctacggg-aggcagcagtg--gggaa-tattggacaatgggcgcaagcctgatccagcaataccgcgtgtgtgaagaaggcctgagggttgtaaagcactttcaatagagacgaaaagcttaggg-ttaataaccct-gagt-cttgacttaacctatagaagaagcaccggctaactccgtgccagcagccgcggtaatacggagggtgcaagcgttaatcggaattactgggcgtaaagcgc-tcgtaggcggtttgttaagtcggatgtgaaagccccgggctcaacctgggaactgcattcgatactgacagact-agagtatagtagaggcaagtggaatt-ccgggtgtagcggtgaaatgcgtagatatccggaggaacatcagtggcgaagg--cgacttgctggactaatactgacgctgaggagcgaaagcgtgggg-agcaaacgggattagataccccggtagtccacgccgtaaacgatgtcaactagccgttgggggtctt-------a-gtacctttagtggcgcagctaacgcattaagtt-gaccgcctggggagtacggtcgc-aagactaaaactcaaa-ggaattgac-gggggcccgcacaagcggtggagcatgtggtttaattcgatgcaacgcgaagaaccttaccagctcttgac-atcctgcgaactttctagagatagattggtgccttcgggaacgc-agtgacaggtgctgcatggc-tgt-cgtcagctcgtgtcgtg--agatgttgggttaagtc-ccgcaacgagcgcaacccttgtccttagttgccagca-cgtaatggtgggaactctaaggagactgccggtgacaaaccggaggaaggtggggatgacgtcaagtcatcatggcccttatgggctgggctacacacgtgctacaatgggctgtacagagggtcgctaacc--cgcgagggggagccaatcccacaaagcagttcttagtccggattgcagtctgcaactcgactgcatgaagttggaatcgctagtaatcgtagatcagcattgctacggtgaatacgttcccgggccttg-tacacaccgcccgtcacaccatgggagtgggttgcaaaagaagtggctagtctaaccttc------gggaggacggtc-accactttgtgattcatgactggggtgaagtcgtaacaaggta------------------------------------ 'AM236327.1.1503_thiotrophic_bacterial_endosymbiont_of_Bathymodiolus_heckerae' --------agagtttga-tcctggctcagattgaatcgctggcggtatgcttaac-acatgc-aagtcgaacggaaacgata-----------------------ctag----------------------------------------------------------------------cttgct-------agtagacgtcgagtggcggacgggtgagtaacgcgtaggaatctgcctgat-agtgggggatagcccagagaaatctggattaataccgcataatctctat-----------------ggagaaaaggagc-----cctctt------cttg------a--aaggtttcgctatcg-gatgagcctgcgtaagattagcttgttggtgaggtaaaagctcacc--aaggcgacgatctttagctggtctgagaggatgatcagccacactggaactgagacacggtccagactcctacggg-aggcagcagtg--gggaa-tattggacaatgggcgcaagcctgatccagcaataccgcgtgtgtgaagaaggcctgagggttgtaaagcactttcaattgtgaagaaaagctaatgg-ttaatacccat-tagc-cttgacgttaactttagaagaagcaccggctaactccgtgccagcagccgcggtaatacggagggtgcaagcgttaatcggaattactgggcgtaaagcgt-gcgtaggtggtttgttaagttagatgtgaaagccctgggctcaacctaggaactgcatttaaaactggtaaact-agagtataggagaggaaagtggaatt-tcaggtgtagcggtgaaatgcgtagatatctgaaggaacatcaatggcgaagg--cagctttctggactaatactgacactgaggtacgaaagcgtgggt-agcaaacaggattagataccctggtagtccacgccgtaaacgatgacaactagccgttgggaggatt---------tacctcttagtggcgaagctaacgcgttaagtt-gtccgcctggggagtacggccgc-aaggctaaaactcaaa-ggaattgac-ggggacccgcacaagcggtggagcatgtggtttaattcgatgcaacgcgaagaaccttacctggtcttgac-atacagagaactttctagagatagattggtgccttcgggaactc-tgatacaggtgctgcatggc-tgt-cgtcagctcgtgtcgtg--agatgttgggttaagtc-ccgtaacgagcgcaacccttatccttatttgccagca-catcatggtgggaactataaggagactgccggtgataaaccggaggaaggcggggacgacgtcaagtcatcatggcccttacgaccagggctacacacgtgctacaatgggaaggacaaagggtcgcaacct--cgcgagagcaagctaatctcataaaccttttcgtagtccggatcggagtctgcaactcgactccgtgaagtcggaatcgctagtaatcg-agatcagaa-tgctacggtgaatacgttcccgggtcttg-tacacaccgcccgtcataccatgggagtgggttgcaccagaagtggctagtctaactgttt----acaggggacggtc-accacggtgtgattcatgactggggtacagtcgtaacaaggta------------------------------------ 'CP000488.1081270.1082807_Candidatus_Ruthia_magnifica_str._Cm_Calyptogena_magnifica' --------agagtttga-tcctggctcagattgaa-cgctggcggtatgcttaac-acatgc-aagtcgaacggaaacgata-----------------------ctag----------------------------------------------------------------------tttact-------agtaggcgtcgagtggcggacgggtgagcaacgcgtaggaatctgcctgataagtgggggatagcccgaagaaattcggattaataccgcataatctctac-----------------ggagcaaaggagg-----cctcta------ttta------t--atgctttcgctatca-gatgagcctgcgtaagattagctagttggtgaggtaaaagcttacc--aaggcaacgatctttagctggtctgagaggatgatcagccacactggaactgagacacggtccagactcctacggg-aggcagcagtg--gggaa-tattggacaatgggcgcaagcctgatccagcaataccgcgtgtgtgaagaaggcctgagggttgtaaagcactttcaattaggaagaaaaactaatgg-ttaatacccat-tagt-cttgacgttacttttagaagaagcaccggctaactccgtgccagcagccgcggtaatacggagggtgcaagcgttaatcggaattactgggcgtaaagcgt-gcgtaggtggtttgttaagttagatgtgaaagccccgggctcaacctgggaactgcatttgaaactggcaaact-agagtataggaggggaaagtggaatt-tctggtgtagcggtgaaatgcgtagatatcagaaggaacatcaatggcgaagg--cagctttctggacaaatactgacactgaggtacgaaagcgtgggt-agcaaacaggattagataccctggtagtccacgccgtaaacgatgataactagccgttggggggaag---------tgccctttagtggcgaagctaacgcgttaagtt-atccgcctggggagtacgaccgc-aaggttaaaactcaaa-ggaattgac-ggggacccgcacaagcggtggagcatgtggtttaattcgatgcaacgcgaagaaccttacctggtcttgac-atatcgcaaacttttcagagatggagaggtgccttcgggaatgc-gaatacaggtgctgcatggc-tgt-cgtcagctcgtgtcgtg--agatgttgggttaagtc-ccgtaacgagcgcaacccttatccttatttgccagta-cgtcatggtgggaactataaggagactgccggtgataaaccggaggaaggcggggacgacgtcaagtcatcatggcccttacgaccagggctacacacgtgctacaatgggaaggacaaagggtcgctaagc--cgtgaggtagtgctaatctcacaaatcttttcgtagtccggatcggagtctgcaactcgactccgtgaagtcggaatcgctagtaatcgtagatcagaa-cgctacggtgaatacgttcccgggtcttg-tacacaccgcccgtcataccatgggagtgggttgcaccagaagtagctagtctaactgttt----acagaggacggtt-accacggtgtgattcatgactggggtaaagtcgtaacaaggtagccctaccggaaggtggggctggattacctcctt-- 'FN822779.1.1494_thiotrophic_endosymbiont_of_Bathymodiolus_mauritanicus' --------agagtttga-tcatggctcagattgaa-cgctggcggtatgcttaac-acatgc-aagtcgaacggaaacgata-----------------------agag----------------------------------------------------------------------cttgct-------cttaggcgtcgagtggcggacgggtgagtaacgcgtaggaatctgcctagt-agtgggggatagcccagagaaatctggattaataccgcataatatctat-----------------ggattaaagtgga-----ggatc--------ttc------g--gacttcacgctacta-gatgagcctgcgtaggattagcttgttggtgaggtaaaagctcacc--aaggcgacgatctttagctggtctgagaggatgatcagccacactggaactgagacacggtccagactcctacggg-aggcagcagtg--gggaa-tattggacaatgggggcaaccctgatccagcaataccgcgtgtgtgaagaaggcctgagggttgtaaagcactttcaattgtgaagaaaagctaatga-ttaatacccat-tagc-cttgacgttaactttagaagaagcaccggctaactccgtgccagcagccgcggtaatacggagggtgcaagcgttaatcggaattactgggcgtaaagcgt-gcgtaggtggttttttaagtcagatgtgaaagccctgggctcaacctaggaactgcatttgaaactggcaaact-agagtataggagaggaaagtggaatt-tcaggtgtagcggtgaaatgcgtagatatctgaaggaacatcaatggcgaagg--cagctttctggactaatactgacactgaggtacgaaagcgtgggt-agcaaacaggattagataccctggtagtccacgccgtaaacgatgataactagccgttgggaggatt---------tacctcttagtggcgaagctaacgcgttaagtt-atccgcctggggagtacggccgc-aaggttaaaactcaaa-ggaattgac-ggggacccgcacaagcggtggagcatgtggtttaattcgatgcaacgcgaagaaccttacctggtcttgac-atacacggaactttccagagatggattggtgccttcgggaaccg-tgatacaggtgctgcatggc-tgt-cgtcagctcgtgtcgtg--agatgttgggttaagtc-ccgtaacgagcgcaacccttatctttatttgccagca-catcatggtgggaactataaagagactgccggtgataaaccggaggaaggcggggacgacgtcaagtcatcatggcccttacgaccagggctacacacgtgctacaatgggaaggacaaagggttgctaggc--cgcgaggtggtgctaatctcataaaccttttcgtagtccggatcggagtctgcaactcgactccgtgaagtcggaatcgctagtaatcgtggatcagaa-cgccacggtgaatacgttcccgggtcttg-tacacaccgcccgtcataccatgggagtgggttgcaaaagaagtgggtagcttatct-------------gggcgctc-accactttgtgattcatgactggggtaaagtcgtaacaaggtaac---------------------------------- 'AY951931.1.1495_Bathymodiolus_azoricus_thioautotrophic_gill_symbiont' --------agagtttga-tcctggctcagattgaa-cgctggcggtatgcttaac-acatgc-aagtcgaacggaaacgata-----------------------agag----------------------------------------------------------------------cttgct-------cttaggcgtcgagtggcggacgggtgagtaacgcgtaggaatctgcctgat-agtgggggatagcccagagaaatctggattaataccgcataatctctat-----------------ggagtaaagtgga-----ggacc--------ttc------g--ggcttcacgctatca-gatgagcctgcgtaagattagcttgttggtgaggtaaaagctcacc--aaggcgacgatctttagctggtctgagaggatgatcagccacactggaactgagacacggtccagactcctacggg-aggcagcagtg--gggaa-tattggacaatgggggcaaccctgatccagcaataccgcgtgtgtgaagaaggcctgagggttgtaaagcactttcaattgtgaagaaaagctaatgg-ttaatacccat-tagc-cttgacgttaactttagaagaagcaccggctaactccgtgccagcagccgcggtaatacggagggtgcaagcattaatcggaattactgggcgtaaagcgt-gcgtaggtggtttgttaagtcagatgtgaaagccctgggctcaacctaggaactgcatttgaaactggcaaact-agagtataggagaggaaagtggaatt-tcaggtgtagcggtgaaatgcgtagat?t?tgaaggaacatcaatggcgaagg--cagctttctggactaatactgac?ctgaggtacgaaagcgtgggt-agcaaacaggattagataccctggtagtccacgccgtaaacgatgacaactagccgttgggaggatt---------tacctcttagtggcgaagctaacgcgttaagtt-gtccgcctggggagtacggccgc-aaggttaaaactcaaa-ggaattgac-ggggacccgcacaagcggtggagcatgtggtttaattcgatgcaacgcgaagaaccttacctggtcttgac-atacacggaactttccagagatagattggtgccttcgggaaccg-tgatacaggtgctgcatggc-tgt-cgtcagctcgtgtcgtg--agatgttgggttaagtc-ccgtaacgagcgcaacccttatctttatttgccagca-catcatggtgggaactataaagagactgccggtgataaaccggaggaaggcggggacgacgtcaagtcatcatggcccttacgaccagggctacacacgtgctacaatgggaaggacaaagggtcgcaacct--cgcgagagcaagctaatctcataaaccttttcgtagtccggatcggagtctgcaactcgactccgtgaagtcggaatcgctagtaatcgtggatcagaa-cgccacggtgaatacgttcccgggtcttg-tacacaccgcccgtcataccatgggagtgggttgcaaaagaagtgggtagcttatct-------------gggcgctc-accactttgtgattcatgactggggtaaagtcgtaacaaggtaacc--------------------------------- 'U77481.1.1459_Lamellibrachia_columna_endosymbiont' ------------------------tgctagttga---cgctgcggtatgcttaac-acatgc-aagtcgaacggtaacgatg-----------------------gaag----------------------------------------------------------------------cttgct-------tccaggcgacgagtggcggacgggtgagtaacgcgtaggaatctgcctagt-agtgggggacaactcggagaaatccgagctaataccgcatacgccctac-----------------gggggaaagcggg-----ggatc--------ttc------g--gacctcgcgctatta-gatgagcctgcgtcggattagcttgttggtgaggtaatggctcacc--aaggcgacgatccgtagctggtctgagaggacgatcagccacactgggactgagacacggcccagactcctacggg-aggcagcagtg--gggaa-tattggacaatgggcgcaagcctgatccagcaataccgcgtgtgtgaagaaggcctgcgggttgtaaagcactttcaattgtgaagaaaagcctagag-ttaatagctct-gggt-cttgacgttaactttagaagaagcaccggctaactccgtgccagcagccgcggtaatacggagggtgcaagcgttaatcggaattactgggcgtaaagcgc-gcgtaggcggtttggtaagtcagatgtgaaagccctgggctcaacctgggaactgcatttgatactgcctgact-agagtgtggtagagggaagtggaatt-ccgggtgtagcggtgaaatgcgtagatatccggaggaacatcagtggcgaagg--cgacttcctggaccaacactgacgctgaggtgcgaaagcgtgggt-agcaaacaggattagataccctggtagtccacgccgtaaacgatgtcaactagctgttgggctcatta------t-aagggtttagtggcgaagctaacgcgataagtt-gaccgcctggggagtacggccgc-aaggttaaaactcaaa-ggaattgac-gggggcccgcacaagcggtggagcatgtggtttaattcgatgcaacgcgaagaaccttacctacccttgac-atcctcagaacttgttagagataacttggtgccttcgggaattg-agtgacaggtgctgcatggc-tgt-cgtcagctcgtgtcgtg--agatgttgggttaagtc-ccgtaacgagcgcaacccttgtccatagttgccagca-cgtaatggtgggaactctatggagactgccggtgacaaaccggaggaaggtggggatgacgtcaagtcatcatggcccttatgggtagggctacacacgtgctacaatggccggtacagagggccgcaaacc--cgcgagggggagctaatctcagaaaaccggtcgtagtccggatcgcagtctgcaactcgactgcgtgaagtcggaatcgctagtaatcgcggatcagca-tgccgcggtgaatacgttcccgggccttg-tacacaccgcccgtcacaccatgggagtgggttgcaaaagaagtgggtagcttacccttc------gggaggacgctc-accacttgg------atcattggg------------------------------------------------------- 'U77482.1.1452_Escarpia_spicata_endosymbiont' ct---------------------------aattga-cgtgcaggtgatgcttaacaacatgc-aagtcgaacggtaacgat------------------------ggag----------------------------------------------------------------------cttgct-------tccaggcgacgagtggcggacgggtgagtaacgcgtaggaatctgcctagt-agtgagggacaactcggagaaatccgagctaataccgcatacgccctac-----------------gggggaaagcggg-----ggatc--------ttc------g--gacctcgcgctatta-gatgagcctgcgtcggattagcttgttggtgaggtaatggctcacc--aaggcgacgatccgtagctggtctgagaggacgatcagccacactgggactgagacacggcccagactcctacggg-aggcagcagtg--gggaa-tattggacaatgggcgcaagcctgatccagcaataccgcgtgtgtgaagaaggcctgcgggttgtaaagcactttcaattgtgaagaaaagcttagag-ttaatagctct-gggt-cttgacgttaactttagaagaagcaccggctaactccgtgccagcagccgcggtaatacggagggtgcaagcgttaatcggaattactgggcgtaaagcgc-gcgtaggcggtttggtaagtcagatgtgaaagccctgggctcaacctgggaactgcatttgatactgcctgact-agagtgtggtagagggaagtggaatt-ccgggtgtagcggtgaaatgcgtagatatccggaggaacatcagtggcgaagg--cgacttcctggaccaacactgacgctgaggtgcgaaagcgtgggt-agcaaacaggattagataccctggtagtccacgccgtaaacgatgtcaactagctgttgggctcatta------t-aagggtttagtggcgaagctaacgcgataagtt-gaccgcctggggagtacggccgc-aaggttaaaactcaaa-ggaattgac-gggggcccgcacaagcggtggagcatgtggtttaattcgatgcaacgcgaagaaccttacctacccttgac-attgacagaatcctgtagagatacgggagtgccttcggg-cctg-gaaaacaggtgctgcatggc-tgt-cgtcagctcgtgtcgtg--agatgttgggttaagtc-ccgtaacgagcgcaacccttgtccttagttgccagca-cataatggtgggaactctaaggagactgccggtgacaaaccggaggaaggtggggatgacgtcaagtcatcatggcccttatgggtagggctacacacgtgctacaatggccggtacagagggctgcaaacccgcgcgagggggagctaatctcagaaaaccggtcgtagtccggatcgcagtctgcaactcgactgcgtgaagtcggaatcgctagtaatcgcggatcagca-tgccgcggtgaatacgttcccgggccttg-tacacaccgcccgtcacaccatgggagtgggttgcaaaagaagtgggtaggttaacctcc------gaggggtcaccc--------------------cttgggt------------------------------------------------ccat- 'U77478.1.1461_endosymbiont_of_Riftia_pachyptila' ----------------------ggcctagattgac---gctgcggtatgcttaacaacatgc-aagtcgaacggtaacgcgg-----------------------agag----------------------------------------------------------------------cttgct-------ctctggcgacgagtggcggacgggtgagtaacgcgtaggaatctgcccagt-agtgggggacaactcggagaaatccgagctaataccgcatacgccctac-----------------gggggaaagcggg-----ggatc--------ttc------g--gacctcgcgctattg-gatgagcctgcgttggattagctagttggtggggtaatggcctacc--aaggcgacgatccatagctggtctgagaggacgatcagccacactgggactgagacacggcccagactcctacggg-aggcagcagtg--gggaa-tattggacaatgggcgaaagcctgatccagcaataccgcgtgtgtgaagaaggcctgcgggttgtaaagcactttcaattgggaagaaaagcctgagg-ataataccctt-gggt-cttgacgttacctttagaagaagcaccggctaactccgtgccagcagccgcggtaatacggagggtgcgagcgttaatcggaattactgggcgtaaagcgc-gcgtaggcggcttgttaagtcagatgtgaaagccctgggctcaacctgggaactgcatttgatactggcaggct-agagtatggtagagggaagtggaatt-ccgggtgtagcggtgaaatgcgtagatatccggaggaacatcagtggcgaagg--cgacttcctggaccaatactgacgctgaggtgcgaaagcgtgggt-agcaaacaggattagataccctggtagtccacgccgtaaacgatgtcaactagccgttgggctcatta------t-aagggcttagtggcgcagctaacgcgataagtt-gaccgcctggggagtacggccgc-aaggttaaaactcaaa-ggaattgac-gggggcccgcacaagcggtggagcatgtggtttaattcgatgcaacgcgaagaaccttaccagcccttgac-atcctcggaactttctagagatagattggtgccttcgggagccg-agtgacaggtgctgcatggc-tgt-cgtcagctcgtgtcgtg--agatgttgggttaagtc-ccgtaacgagcgcaacccttgcccttagttgccagca-cgtaatggtgggaactctaaggggactgccggtgacaaaccggaggaaggtggggatgacgtcaagtcatcatggcccttatgggctgggctacacacgtgctacaatggccggtacagagggctgcaaacc--cgcgagggggagccaatctcagaaaaccggtcgtagtccggatcgcagtctgcaactcgactgcgtgaagtcggaatcgctagtaatcgcggatcagca-tgccgcggtgaatacgttcccgggccttg-tacacaccgcccgtcacaccatgggagtgggttgcaaaagaagtgggtagagtatcctct------ctgggggggcca-cccttgggatcagtggg-------------------------------------------------------------- 'AF432145.1.1540_Sedimenticola_selenatireducens' --------------gat-ccttggctcagattgaa-cgctggcggtatgcttaac-acatgc-aagtcgaacggcagcacgag----------------------agag----------------------------------------------------------------------cttgctc------tcttggtggcgagtggcggacgggtgagtaacgcgtaagaatctgcctagt-agtgggggataactcggggaaactcgagctaataccgcatacgccctac-----------------gggggaaagtggg-----ggacc--------ttc------g--ggcctcacgctatta-gatgagcttgcgttggattagctagttggtagggtaatggcctacc--aaggcgacgatccatagctggtctgagaggacgatcagccacactgggactgagacacggcccagactcctacgggtaggcagcagtgccgggaa-tattggacaatgggcgcaagcctgatccagcaataccgcgtgtgtgaagaaggcctgcgggttgtaaagcactttcaattgtgaagaaaagcggaagg-ctaataccctt-ctgt-cttgacgttaactttagaagaagcaccggctaactctgtgccagcagccgcggtaatacagagggtgcgagcgttaatcggaattactgggcgtaaagcgtggcgtaggcggtttagtaagtcagatgtgaaagccctgggcttaacctgggaactgcatttgaaactgctgaact-agagtgtggtagagggaagtggaatt-ccgggtgtagcggtgaaatgcgtagatatccggaggaacaccagtggcgaagg--cgacttcctggaccaacactgacgctgaggtacgaaagcgtgggt-agcaaacaggattagataccctggtagtccacgccgtaaacgatgtcaactagttgttgggagcatc-------t-tggctcttagtaacgtagctaacgcgataagtt-gaccgcctggggagtacggccgc-aaggttaaaactcaaa-ggaattgac-gggggcccgcacaagcggtggagcatgtggtttaattcgatgcaacgcgaagaaccttaccagcccttgac-atcctgcgaactttctagagatagattggtgccttcgggaatcgcagagacaggtgctgcatggc-tgtacgtcagctcgtgtcgtg--agatgttgggttaagtc-ccgtaacgagcgcaacccttgcccttagttgccagcaccgtaatggtgggaactctagggggactgccggtgataaaccggaggaaggtggggatgacgtcaagtcatcatggcccttatgggctgggctacacacgtgctacaatggccggtgcagagggccgcaaacc--cgcgagggggagcaaatctcacaaaaccggtcgtagtccggatcggagtctgcaactcgactccgtgaagttggaatcgctagtaatcgcgaatcagaa-tgtcgcggtgaatacgttcccgggccttgttacacaccgcccgtcacaccatgggagtgggttgcaaaagaagtaggtagtctaaccttc------gggaggacgctt-accactttgtgattcatgactggggtgaagtcgtaacaaggtagccctaggggaacctgcggctggatcacctcctta- 'FM211773.1.1500_uncultured_Codakia_orbicularis_gill_symbiont' --------agagtttga-tcctggctcagattgaa-cgctggcggcatgcttaac-acatgc-aagtcgaacggtaacagcg-----------------------gaag----------------------------------------------------------------------cttgct-------tccggctgacgagtggcggacgggtgagtaacgcgtaggaatctgcctagt-agtgggggacaacccggggaaactcgggctaataccgcataagccctac-----------------gggggaaagcggg-----ggatc--------ttc------g--gacctcgcgctatta-gatgagcctgcgtcggattagcttgttggtagggtaatggcctacc--aaggcgacgatccgtagctggtctgagaggacgaccagccacactgggactgagacacggcccagactcctacggg-aggcagcagtg--gggaa-tattgcacaatgggcgcaagcctgatgcagcaatgccgcgtgtgtgaagaaggcctgcgggttgtaaagcactttcaattgggaggaaaagttcagag-ttaatagctct-ggac-cttgacgttacctttagaagaagcaccggctaactccgtgccagcagccgcggtaatacggagggtgcaagtgttaatcggaattactgggcgtaaagcgc-gcgtaggtggtttggtaagtcagatgtgaaagccccgggctcaacctgggaactgcatctgatactgcctgact-agagtatggtagagggaagtggaatt-ccaggtgtagcggtgaaatgcgtagatatctggaggaacatcagtggcgaagg--cgactttctggaccaatactgacactgaggcgcgaaagcgtgggt-agcaaacaggattagataccctggtagtccacgccgtaaacgatgtcaactagccgttgggctcatta------t-aagggcttagtggcgaagctaacgcgataagtt-gaccgcctggggagtacggccgc-aaggctaaaactcaaa-ggaattgac-gggggcccgcacaagcggtggagcatgtggtttaattcgatgcaacgcgaagaaccttaccagcccttgac-atcctcggaacttactagagatagtttggtgccttcgggaaccg-agtgacaggtgctgcatggc-tgt-cgtcagctcgtgtcgtg--agatgttgggttaagtc-ccgtaacgagcgcaacccttgtccctagttgccagca-cttcg-ggtgggaactctagggagactgccggtgacaaaccggaggaaggtggggatgacgtcaagtcatcatggcccttatgggctgggctacacacgtgctacaatggccggtacagagggctgccaacc--cgcgagggggagctaatctcagaaaaccggtcgtagtccggattgcagtctgcaactcgactgcatgaagtcggaatcgctagtaatcgcgaatcagca-tgtcgcggtgaatacgttcccgggccttg-tacacaccgcccgtcacaccatgggagtgggttgcaaaagaagtgggtagcttaaccttc------gggagggcgctc-accactttgtgattcatgactggggtgaagtcgtaacaaggta------------------------------------ 'AM418384.1.1521_Pseudoxanthomonas_spadix' --------------------------------gaa-cgctggcggtaggcctaac-acatgc-aagtcgaacggcagcacagt---------------------aagag----------------------------------------------------------------------cttgctc-----ttatgggtggcgagtggcggacgggtgaggaatacatcggaatctacctttt-ggtgggggataacgtagggaaacttacgctaataccgcatacgcccttc-----------------gggggaaagccgg-----ggacc--------agc------aatggcctggtgctgata-gatgagccgatgtcggattagctagttggtgaggtaatggctcacc--aaggcgacgatccgtagctggtctgagaggatgatcagccacactggaactgagacacggtccagactcctacggg-aggcagcagtg--gggaa-tattggacaatgggcgcaagcctgatccagccataccgcgtgggtgaagaaggccttcgggttgtaaagcccttttgttgggaaagaaaagcattcgg-ttaatacccgg-gtgt-tctgacggtacccaaagaataagcaccggctaacttcgtgccagcagccgcggtaatacgaagggtgcaagcgttactcggaattactgggcgtaaagcgt-gcgtaggtggtggtttaagtccgttgtgaaagccctgggctcaacctgggaattgcagtggatactgggtcact-agagtgtggtagaggatagtggaatt-tccggtgtagcagtgaaatgcgtagagatcggaaggaacatctgtggcgaagg--cgactatctgggccaacactgacactgaggcacgaaagcgtgggg-agcaaacaggattagataccctggtagtccacgccctaaacgatgcgaactggatgttgggttcaac-------t-tggaacccagtatcgaagctaacgcgttaagtt-cgccgcctggggagtacggtcgc-aagactgaaactcaaa-ggaattgac-gggggcccgcacaagcggtggagtatgtggtttaattcgatgcaacgcgaagaaccttacctggtcttgac-atccacggaactttccagagatggattggtgccttcgggaaccg-tgagacaggtgctgcatggc-tgt-cgtcagctcgtgtcgtg--agatgttgggttaagtc-ccgcaacgagcgcaacccttgtccttagttgccagca-cgtaaaggtgggaactctaaggagaccgccggtgacaaaccggaggaaggtggggatgacgtcaagtcatcatggcccttacgaccagggctacacacgtactacaatggtcaggacagagggctgcaagcc--ggcgacggtgagccaatcccagaaacctgatctcagtccggattggagtctgcaactcgactccatgaagtcggaatcgctagtaatcgcagatcagcattgctgcggtgaatacgttcccgggccttg-tacacaccgcccgtcacaccatgggagtttgttgcaccagaagcaggtagcttaaccgca------aggagggcgctt-gccacggtgtggccgatgactggggtgaagtcgtaacaaggtagccgtatcggaaggtgcggctggatcacctctttc- 'AB558557.1.1421_Xanthomonas_theicola' ------------------------------------cgctggcggcaggcctaac-acatgc-aagtcgaacggcagcacagt---------------------ggtag----------------------------------------------------------------------c--aata-----ccatgggtggcgagtggcggacgggtgaggaatacatcggaatctacctttt-cgtgggggataacgtagggaaacttacgctaataccgcatacgacctta-----------------gggtgaaagcgga-----ggacc--------ttc------g--ggcttcgcgcggata-gatgagccgatgtcggattagctagttggcggggtaaaggcccacc--aaggcgacgatccgtagctggtctgagaggatgatcagccacactggaactgagacacggtccagactcctacggg-aggcagcagtg--gggaa-tattggacaatgggcgcaagcctgatccagccatgccgcgtgggtgaagaaggccttcgggttgtaaagcccttttgttgggaaagaaaagcagtcgg-ttaatacccga-ttgt-tctgacggtacccaaagaataagcaccggctaacttcgtgccagcagccgcggtaatacgaagggtgcaagcgttactcggaattactgggcgtaaagcgt-gcgtaggtggttgtttaagtccgttgtgaaagccctgggctcaacctgggaattgcagtggatactgggcaact-agagtgtggtagaggatggcggaatt-cccggtgtagcagtgaaatgcgtagagatcgggaggaacatctgtggcgaagg--cggccatctggaccaacactgacactgaggcacgaaagcgtgggg-agcaaacaggattagataccctggtagtccacgccctaaacgatgcgaactggatgttgggtgcaac-------t-tggcacgcagtatcgaagctaacgcgttaagtt-cgccgcctggggagtacggtcgc-aagactgaaactcaaa-ggaattgac-gggggcccgcacaagcggtggagtatgtggtttaattcgatgcaacgcgaagaaccttacctggtcttgac-atccacggaactttccagagatggattggtgccttcgggaaccg-tgagacaggtgctgcatggc-tgt-cgtcagctcgtgtcgtg--agatgttgggttaagtc-ccgcaacgagcgcaacccttgtccttagttgccagca-cgtcatggtgggaactttaaggagaccgccggtgacaaaccggaggaaggtggggatgacgtcaagtcatcatggcccttacgaccagggctacacacgtactacaatggtgaggacagagggctgcaaact--cgcgagagtgagccaatcccagaaacctcatctcagtccggattggagtctgcaactcgactccatgaagtcggaatcgctagtaatcgcagatcagcattgctgcggtgaatacgttcccgggccttg-tacacaccgcccgtcacaccatgggagtttgttgcaccagaagcaggtagcttaacctt--------------------------------------------------------------------------------------------------- 'AB166878.1.1474_Lysobacter_koreensis' ------------------ccccgtc---gagtgaa-cgctggcggcaggcctaac-acatgc-aagtcgaacggcagcacagt---------------------aagag----------------------------------------------------------------------cttgctc-----ttatgggtggcgagtggcggacgggtgaggaatacgtcggaatctgcctatt-tgtgggggataacgtagggaaacttacgctaataccgcatacgacctac-----------------gggtgaaagcgga-----ggacc--------ttc------g--ggcttcgcgcagata-gatgagccgacgtcggattagctagttggcggggtaaaggcccacc--aaggcgacgatccgtagctggtctgagaggatgatcagccacactggaactgagacacggtccagactcctacggg-aggcagcagtg--gggaa-tattggacaatgggcgcaagcctgatccagccatgccgcgtgtgtgaagaaggccttcgggttgtaaagcacttttgtccggaaagaaaagcactcgg-ttaatacccgg-gtgt-catgacggtaccggaagaataagcaccggctaacttcgtgccagcagccgcggtaatacgaagggtgcaagcgttactcggaattactgggcgtaaagcgt-gcgtaggtggtttgttaagtctgatgtgaaagccctgggctcaacctgggaatggcattggatactggcaatct-agagtgcggtagaggggtgtggaatt-cccggtgtagcagtgaaatgcgtagatatcgggaggaacatctgtggcgaagg--cgacaccctggaccagcactgacactgaggcacgaaagcgtgggg-agcaaacaggattagataccctggtagtccacgccctaaacgatgcgaactggatgttgggagcaac-------t-aggctctcagtatcgaagctaacgcgttaagtt-cgccgcctgggaagtacggtcgc-aagactgaaactcaaa-ggaattgac-gggggcccgcacaagcggtggagtatgtggtttaattcgatgcaacgcgaagaaccttacctggccttgac-atgtcgcgaatccttgagagatcgaggagtgccttcgggaacgc-gaacacaggtgctgcatggc-tgt-cgtcagctcgtgtcgtg--agatgttgggttaagtc-ccgcaacgagcgcaacccttgtccttagttgccagca-cgtaatggtgggaactctaaggagaccgccggtgacaaaccggaggaaggtggggatgacgtcaagtcatcatggcccttacggccagggctacacacgtactacaatggtagggacagagggtcgcaaact--cgcgagagccagccaatcccagaaaccctatctcagtccggatcggagtctgcaactcgactccgtgaagtcggaatcgctagtaatcgcagatcagcattgctgcggtgaatacgttcccgggccttg-tacacaccgcccgtcacaccatgggagtttgttgcaccagaagcaggtagcttaaccttc------gggagggcgctt-gccacggtgtggcagatgactggg------------------------------------------------------- 'EF660758.1.1409_Luteimonas_aestuarii' ---------------------------------------------------------catgc--agtcgaacggcagcacaag----------------------ggag----------------------------------------------------------------------cttgct------ccctgggtggcgagtggcggacgggtgaggaatacatcggaatctgcctatt-tgtgggggataacgtagggaaacttacgctaataccgcatacgacctac-----------------gggtgaaagcgga-----ggacc--------ttc------g--ggcttcgcgcagata-gatgagccgatgtcggattagctagttggcggggtaaaggcccacc--aaggcgacgatccgtagctggtctgagaggatgatcagccacactggaactgagacacggtccagactcctacggg-aggcagcagtg--gggaa-tattggacaatgggcgcaagcctgatccagccatgccgcgtgggtgaagaaggccttcgggttgtaaagcccttttgttgggaaagaaaagcaatcgg-ttaatacccgg-ttgt-tctgacggtacccaaagaataagcaccggctaacttcgtgccagcagccgcggtaatacgaagggtgcaagcgttactcggaattactgggcgtaaagcgt-gcgtaggtggttcgttaagtctgatgtgaaagccctgggctcaacctgggaattgcattggatactggcgggct-agagtgcggtagagggcagtggaatt-cctggtgtagcagtgaaatgcgtagagatcaggaggaacatctgtggcgaagg--cgactgcctggaccagcactgacactgaggcacgaaagcgtgggg-agcaaacaggattagataccctggtagtccacgccctaaacgatgcgaactggatgttgggtgcaat-------t-tggcactcagtatcgaagctaacgcgttaagtt-cgccgcctggggagtacggtcgc-aagactgaaactcaaa-ggaattgac-gggggcccgcacaagcggtggagtatgtggtttaattcgatgcaacgcgaagaaccttacctggccttgac-atgcacggaactttccagagatggattggtgccttcgggaaccg-tgacacaggtgctgcatggc-tgt-cgtcagctcgtgtcgtg--agatgttgggttaagtc-ccgcaacgagcgcaacccttgtccttagttgccagca-cgtaatggtgggaactctaaggagaccgccggtgacaaaccggaggaaggtggggatgacgtcaagtcatcatggcccttacggccagggctacacacgtactacaatgggaaggacagagggctgcaaacc--cgcgagggcaagccaatcccagaaaccttctctcagtccggatcggagtctgcaactcgactccgtgaagtcggaatcgctagtaatcgcagatcagcattgctgcggtgaatacgttcccgggccttg-tacacaccgcccgtcacaccatgggagtttgttgcaccagaagcaggtagcctaaccttc------gggggggc------------------------------------------------------------------------------------ 'FR749910.1.1534_Xanthomonas_perforans' -------------ttga-tcctggctcagagtgaa-cgctggcggcaggcctaac-acatgc-aagtcgaacggcagcacagt---------------------aagag----------------------------------------------------------------------cttgctc-----ttatgggtggcgagtggcggacgggtgaggaatacatcggaatctactcttt-cgtgggggataacgtagggaaacttacgctaataccgcatacgacctac-----------------gggtgaaagcgga-----ggacc--------ttc------g--ggcttcgcgcggttg-aatgagccgatgtcggattagctagttggcggggtaaaggcccacc--aaggcgacgatccgtagctggtctgagaggatgatcagccacactggaactgagacacggtccagactcctacggg-aggcagcagtg--gggaa-tattggacaatgggcgcaagcctgatccagccatgccgcgtgggtgaagaaggccttcgggttgtaaagcccttttgttgggaaagaaaagcagtcgg-ttaatacccga-ttgt-tctgacggtacccaaagaataagcaccggctaacttcgtgccagcagccgcggtaatacgaagggtgcaagcgttactcggaattactgggcgtaaagcgt-gcgtaggtggtggtttaagtctgttgtgaaagccctgggctcaacctgggaattgcagtggatactggatcact-agagtgtggtagagggtagcggaatt-cccggtgtagcagtgaaatgcgtagagatcgggaggaacatccgtggcgaagg--cggctacctggaccaacactgacactgaggcacgaaagcgtgggg-agcaaacaggattagataccctggtagtccacgccctaaacgatgcgaactggatgttgggtgcaat-------t-tggcacgcagtatcgaagctaacgcgttaagtt-cgccgcctggggagtacggtcgc-aagactgaaactcaaa-ggaattgac-gggggcccgcacaagcggtggagtatgtggtttaattcgatgcaacgcgaagaaccttacctggtcttgac-atccacggaactttccagagatggattggtgccttcgggaaccg-tgagacaggtgctgcatggc-tgt-cgtcagctcgtgtcgtg--agatgttgggttaagtc-ccgcaacgagcgcaacccttgtccttagttgccagca-cgtaatggtgggaactctaaggagaccgccggtgacaaaccggaggaaggtggggatgacgtcaagtcatcatggcccttacgaccagggctacacacgtactacaatggtagggacagagggctgcaaacc--cgcgagggcaagccaatcccagaaaccctatctcagtccggattggagtctgcaactcgactccatgaagtcggaatcgctagtaatcgcagatcagcattgctgcggtgaatacgttccggggccttg-tacacaccgcccgtcacaccatgggagtttgttgcaccagaagcaggtagcttaaccttc------gggagggcgctt-gccacggtgtggccgatgactggggtgaagtcgtaacaaggtagccgtatcggaaggtgcggctggatcacctcctt-- 'U62646.1.1452_Stenotrophomonas_maltophilia' ----------------------------------a-cgctggcggtaggc-taac-acatgc-aagtcgaacggcagcacaga----------------------ggag----------------------------------------------------------------------cttgct------ctttgggtggcgagtggcggacgggtgaggaatacatcggaatctactctgt-cgtgggggataacgtagggaaacttacgctaataccgcatacgacctac-----------------gggtgaaagcagg-----ggatc--------ttc------g--gaccttgcgcgattg-aatgagccgatgtcggattagctagttggcggggtaaaggcccacc--aaggcgacgatccgtagctggtctgagaggatgatcagccacactggaactgagacacggtccagactcctacggg-aggcaagcagt--gggga-WatttggcaatgggcgcaMV-tgaatccagccataccgcgtgggtgaagaagg-cttcgggttgtaaagcccttttgttgggaaagaaatccagccggctta?tacctgg-ttgg-gatgacggtacccaaagaataagcaccggctaacttcgtgccagcagccgcggtaatacgaagggtgcaagcgttactcggaattactgggcgtaaagcgt-gcgtaggtggtcgtttaagtccgttgtgaaagccctgggctcaacctgggaactgcagtggatactggacgact-agagtgtggtagagggtagcggaatt-cctggtgtagcagtgaaatgcgtagagatcaggaggaacatccatggcgaagg--cagctacctggaccaacactgacactgaggcacgaaagcgtgggg-agcaaacaggattagataccctggtagtccacgccctaaacgatgcgaactggatgttgggtgcaat-------t-tggcacgcagtatcgaagctaacgcgttaagtt-cgccgcctggggagtacggtcgc-aagactgaaactcaaa-ggaattgac-gggggcccgcacaagcggtggagtatgtggtttaattcgatgcaacgcgaagaaccttacctggccttgac-atgtcgagaactttccagagatggatcggtgccttcgggaactc-gaacacaggtgctgcatggc-tgt-cgtcagctcgtgtcgtg--agatgttgggttaagtc-ccgcaacgagcgcaacccttgtccttagttgccagca-cgtaatggtgggaactctaaggagaccgccggtgacaaaccggaggaaggtggggatgacgtcaagtcatcatggcccttacggccagggctacacacgtactacaatggtagggacagagggctgcaagcc--ggcgacggtaagccaatcccagaaaccctatctcagtccggattggagtctgcaactcgactccatgaagtcggaatcgctagtaatcgcagatcagcattgctgcggtgaatacgttcccgggccttg-tacacaccgcccgtcacaccatgggagtttgttgcaccagaagcaggtagcttaacttc-------gggagggcgctt--tcacggtgtggccgatgact---------------------------------------------------------- 'AF192343.1.1537_Xylella_fastidiosa' --------agagtttga-tcctggctcagagtgaa-cgctggcggcaggcctaac-acatgc-aagtcggacggcagcacatt---------------------ggtag------------------------------------------------------------------------taata-----ccatgggtggcgagtggcggacgggtgaggaatacatcggaatctaccttat-cgtgggggacaacgtagggaaacttacgctaataccgcatacgacctac-----------------gggtgaaagcagg-----ggacc--------tta------g--ggccttgtgcgattg-gatgagccgatgtccgattagctagttggtgaggtaaaggctcacc--aaggcgacgatcggtagctggtctgagaggatgatcagccacactggaactgagacacggtccagactcctacggg-aggcagcagtg--gggaa-tattggacaatgggcgcaagcctgatccagctatgccgcgtgggtgaagaatgccttcgggttgtaaagcccttttgttggggaagaaaggcaattgg-ttaatacctag-ttgt-tatgacggtacccaaagaataagcaccggctaacttcgtgccagcagccgcggtaatacgaagggtgcaagcgttactcggaattactgggcgtaaagggt-gcgtaggtggttatttaagtctgttgtgaaagccctgggcttaacctgggaatggcagtggatactggatagct-agagtgtggtagagggtagcggaatt-cctggtgtagcagtgaaatgcgtagagatcaggaggaacatccgtggcgaagg--cggctacctgggccaacactgacactgaggcacgaaagcgtgggg-agcaaacaggattagataccctggtagtccacgccctaaacgatgcgaactggatgttgagtgcaaa-------t-tggcactcagtatcgaagctaacgcgttaagtt-cgccgcctggggagtacggtcgc-aagactgaaactcaaa-ggaattgac-gggggcccgcacaagcggtggagtatgtggtttaattcgatgcaacgcgaagaaccttacctggtcttgac-atctgcggaactttccagagatggattggtgccttcgggagccg-tgagacaggtgctgcatggc-tgt-cgtcagctcgtgtcgtg--agatgttgggttaagtc-ccgcaacgagcgcaacccttgtccttagttgccagca-cgtaatggtgggaactttaaggagactgccggtgacaaatcggaggaaggtggggatgacgtcaagtcatcatggcccttacgaccagggctacacacgtactacaatggtagggacagagggctgcaatct--cgcgagggtgagctaatcccagaaaccctatctcagtccggattggagtctgcaactcgactccatgaagtcggaatcgctagtaatcgcagatcagcattgctgcggtgaatacgttcccgggccttg-tacacaccgcccgtcacaccatgggagtttgttgcaccagaagcaggtagcttaaccgcg------aggagggcgctt-gccacggtgtggccgatgactggggtgaagtcgtgacaaggtagccgtatcggaaggtgcggctggatcacctcctt-- 'DQ239766.1.1488_Arenimonas_malthae' -------------------------tcagagtgaa-cgctggcggcaggcctaac-acatgc-aagtcgagcggcagcgggtc----------------------gtag------------------------------------------------------------------------------caatacgatgccggcgagcggcggacgggtgaggaatacatcggaatctacccagt-cgtgggggataacgtagggaaacttacgctaataccgcatacgacctga-----------------gggtgaaagcagg-----ggacc--------gca------a--ggccttgcgcgattg-gatgagccgatgtcggattagctagttggtgaggtaaaggctcacc--aaggcgacgatccgtagctggtctgagaggatgatcagccacactggaactgagacacggtccagactcctacggg-aggcagcagtg--gggaa-tattggacaatgggcgcaagcctgatccagccatgccgcgtgtgtgaagaaggccttcgggttgtaaagcacttttgtccgggaagaaatcttccgac-ctaatacgtcg-ggag-gatgacggtaccggaagaataagcaccggctaacttcgtgccagcagccgcggtaatacgaagggtgcaagcgttactcggaattactgggcgtaaagcgt-gcgtaggtggttcgttaagtctgccgtgaaagccccgggctcaacctgggaatggcggtggatactggcggact-agagtgcggtagagggtggtggaatt-cccggtgtagcagtgaaatgcgtagagatcgggaggaacatctgtggcgaagg--cggccacctggaccagcactgacactgaggcacgaaagcgtgggg-agcaaacaggattagataccctggtagtccacgccctaaacgatgcgaactggacgttgggctcaat-------t-aggagctcagtgtcgaagctaacgcgttaagtt-cgccgcctggggagtacggtcgc-aagactgaaactcaaa-ggaattgac-gggggcccgcacaagcggtggagtatgtggtttaattcgatgcaacgcgcagaaccttacctggccttgac-atccacggaatcctttagagatagaggagtgccttcgggaaccg-tgagacaggtgctgcatggc-tgt-cgtcagctcgtgtcgtg--agatgttgggttaagtc-ccgcaacgagcgcaacccttgtccttagttgccagcg-agtaatgtcgggaactctaaggagactgccggtgacaaaccggaggaaggtggggatgacgtcaagtcatcatggcccttacggccagggctacacacgtactacaatggtggggacagagggtcgcgaggc--cgcgaggcggagccaatcccagaaaccccatcctagtccggatcggagtctgcaactcgactccgtgaagtcggaatcgctagtaatcgcagatcagcattgctgcggtgaatacgttcccgggccttg-tacacaccgcccgtcacaccatgggagtgggttgcaccagaagcaggtagtctaaccgca------agggggacgctt-gccacggtgtgattcatgactggggtgaagtcgtaacaaggtagcc--------------------------------- 'AF110274.1.1491_Beggiatoa_alba_B18LD' --------agagtttga-tcctggctcagattgaa-cgctggcggcatgcttaac-acatgc-aagtcgaacggtaacggg---------------------------------------------------------------------------------------------------------------ttaagccgacgagtggcggacgggtgagtaatacatgggaatctgcctgat-agtgggggacaacctagggaaacttaggctaataccgcataatccctaa-----------------gggggaaagtagg-----ggacc--------ttc------g--ggccttacgctaaca-gatgagcccatgtcggattagctagttggtagggtaaaagcctacc--aaggctacgatccgtagctggtctgagaggacgaccagccacactgggactgagacacggcccagactcctgcggg-aggcagcagtg--gggaa-tattggacaatgggggcaaccctgatccagcaatgccgcgtgtgtgaagaaggcctgcgggttgtaaagcactttaggttgggaagaaaaagcacatg-ctaataccatg-tgaa-attgacgttaccaacggaataagcaccggctaactctgtgccagcagccgcggtaatacagagggtgcaagcgttaatcggaattactgggcgtaaagcgt-gcgtaggtggttaattaagtcagatgtgaaatccctgagcttaacttaggaacagcatttgatactggttgact-agagtgtaatagagggtagtggaatt-ccacgtgtagcggtgaaatgcgtagatatgtggaggaacatcagtggcgaagg--cgactacctggattaacactgacactgaggcacgaaagcgtgggg-agcaaacaggattagataccctggtagtccacgccctaaacgatgagaactagatgttgggagagac---------tgtctcttagtatcgcagctaacgcactaagtt-ctccgcctggggagtacggtcgc-aagattaaaactcaaa-tgaattgac-gggggcccgcacaagcggtggagcatgtggtttaattcgatgcaacgcgaagaaccttacctggtcttgac-atcctaagaatcctgtagaaatatgggagtgccttcgggagctt-agagacaggtgctgcatggc-tgt-cgtcagctcgtgtcgtg--agatgttgggttaagtc-ccgcaacgagcgcaacccctatccttagttgccagcg---taaagtcgggaactctaaggagactgccgatgacaaatcggaggaaggtggggatgacgtcaagtcatcatggcctttatgaccagggctacacacgtgctacaatggtaggtacaaggggttgccaagc--cgcgaggtggagccaatcccagaaaacctatcgtagtccggattgaagtctgcaactcgactccatgaagtcggaatcgctagtaatcgtagatcagcactgctacggtgaatacgttcccgggccttg-tacacaccgcccgtcacaccatgggagtgggctgtaccagaagtaggtagtctaaccgaa------aggggggcgctt-accacggtatggttcatgactggggtgaagtcgtaacaaggtaaccc-------------------------------- 'CP000513.1336008.1337539_Dichelobacter_nodosus_VCS1703A' --aactgaagagtttga-ttctggctcagattgaa-cgctggcggcatgcttaac-acatgc-aagtcgaacggggttat-------------------------gtag----------------------------------------------------------------------cttgct---------atgtaacctagtggcggacgggtgagtaatatataggaatctgccttat-ggtgggggacaacgtatggaaacgtacgctaataccgcataagattgaa-----------------gaatgaaagcggg-----ggctc--------gaa------a--gacctcgcgccgtaa-gatgagcctatatcggattagctagttggtggggtaagagcctacc--aaggcgacgatccgtagctggtttgagagaatgatcagccacatcgggactgagacacggcccgaactcctacggg-aggcagcagtg--gggaa-tattggacaatggggggaaccctgatccagcaatgccgcgtgtgtgaagaaggccttcgggttgtaaagcacttttattagtgaagaacggtgcatgg-ttaataccca--tgca-attgacattagctaaggaaaaagcaccggctaactccgtgccagcagccgcggtaatacggagggtgcaagcgttattcggaatgactgggcgtaaagcgc-acgcaggtggttttataagtcaggtgtgaaatccctgggctcaacctaggaattgcatttgaaaccgtaagact-agagtatgtcagaggaaggcggaatt-tccagtgtagcagtgaaatgcgtagatattggaaggaacaccgatggcgaagg--cagccttctggggcaatactgacactcatgtgcgaaagcgtgggt-agcaaacaggattagataccctggtagtccacgccctaaacgatgtcaactaggtgttgggtaga------------aatactcggtaccgaagctaacgcaataagtt-gaccgcctggggagtacggccgc-aaggttgaaactcaaa-gaaattgac-ggggacccgcacaagcggtggagcatgtggtttaattcgatgcaacgcgaagaaccttaccaggctttgac-atccagagaattctacagagatgtgggagtgccttcgggaactc-tgagacaggtgttgcatggc-tgt-cgtcagctcgtgtcgtg--agatgttgggttaagtc-ccgcaacgagcgcaacccttatccttacttgccagca-cgtaaaggtgggaactataaggagactgccggtgacaaaccggaggaaggtggggatgacgtcaagtcatcatggcccttacagcctgggctacacacgtgctacaatgggcggtacagacggtagccaacc--cgcgagggggagccaatctgagaaaaccgttcgtagtccggattgcagtctgcaactcgactgcatgaagtcggaatcgctagtaatcgcgaatcagca-cgtcgcggtgaatacgttcccgggtcttg-tacacactgcccgtcacaccatgggagtttgttgcaccagaagtaggtagcttaaccgta------aggagggcgctt-accacggtgtggccgatgactggggtgaagtcgtaacaaggtaaccgtaggggaacctgcggttggatcacctccttt- 'AJ717394.1.1486_Suttonella_ornithocola' ----------------------------gattgaa-cgctggcggcatgcttaac-acatgc-aagtcgaacggtagcagata----------------------agag----------------------------------------------------------------------cttgctc------ttatgctgacgagtggcggacgggtgagtaacgcataggaatctgcctatt-ggtgggggataacgtagggaaacttacgctaataccgcataagacctaa-----------------gggagaaagcggg-----ggatc--------ttc------g--gacctcgcgccgata-gatgagcctatgttggattagctagatggtggggtaaaggcctacc--atggcgacgatccatagctggtttgagaggatgatcagccacatcgggactgagacacggcccgaactcctacggg-aggcagcagtg--gggaa-tattggacaatggggggaaccctgatccagcaatgccgcgtgtgtgaagaaggccttcgggttgtaaagcactttcagtagtgaagaaaaggcaatag-ttaatagcta--ttga-tttgacattagctacagaagaagcaccggctaactccgtgccagcagccgcggtaatacggagggtgcaagcgttattcggaatgactgggcgtaaagcgc-acgcaggcggttacttaagtcagatgtgaaagccccgggcttaacctgggaactgcatttgaaactgagtaact-agagtatgtcagaggaaggcggaatt-tccagtgtagcagtgaaatgcgtagagattggaaggaacaccgatggcgaagg--cagccttctggggcaatactgacgctcatgtgcgaaagcgtgggt-agcaaacaggattagataccctggtagtccacgccctaaacgatgtcaactaggcgttgggtacatt----------agtgctcggtgccgcagctaacgcattaagtt-gaccgcctggggagtacggccgc-aaggttgaaactcaaa-gaaattgac-ggggacccgcacaagcggtggagcatgtggtttaattcgatgcaacgcgaagaaccttaccaggccttgac-atccagagaacttagcagagatgctttggtgccttcgggaactc-tgagacaggtgttgcatggc-tgt-cgtcagctcgtgtcgtg--agatgttgggttaagtc-ccgcaacgagcgcaacccttatccttacttgccagca-ctttg-ggtgggaactataaggagactgccggtgacaagccggaggaaggtggggatgacgtcaagtcatcatggcccttacggtctgggctacacacgtgctacaatggtcggtacaaacggttgccaagt--cgcgagacggagctaatctgagaaagccgatcgtagtccggattgcagtctgcaactcgactgcatgaagtcggaatcgctagtaatcgcgaatcagca-tgtcgcggtgaatacgttcccgggtcttg-tacacactgcccgtcacaccatgggagtgggttgcaccagaagtagctagcttatc-------------agggcggtt-accacggtgtgattcataactggggtgaagtcgtaacaaggtaaccgtaggggaacc---------------------- 'ACKY01000036.4276.5797_Cardiobacterium_hominis_ATCC_15826' --------agagtttga-ttctggctcagattgaa-cgctggcggcatgcttaac-acatgc-aagtcgaacggaaacgat------------------------ggag----------------------------------------------------------------------cttgct--------ccaggcgtcgagtggcggacgggtgagtaacgcatgggaatctgcctttt-gctgggggataacgtagggaaacttacgctaataccgcataagacctaa-----------------gggtgaaagcggg-----ggacc--------gaa------a--ggcctcgcggcaaga-gatgagcccatgttggattagctagttggtggggtaaaggcctacc--aaggcgacgatccatagctggtctgagaggatgatcagccacactgggactgagacacggcccagactcctacggg-aggcagcagtg--gggaa-tattggacaatggggggaaccctgatccagcaatgccgcgtgtgtgaagaaggccttcgggttgtaaagcactttcagtagggaggaaaggtgcgtag-ttaatacctg--cgca-attgacgttacctacagaagaagcaccggctaactccgtgccagcagccgcggtaatacggagggtgcgagcgttattcggaattactgggcgtaaagcgc-acgcaggcggttgcccaagtcagatgtgaaagccccgggcttaacctgggaactgcatttgaaactgggcgact-agagtatgaaagaggaaagcggaatt-tccagtgtagcagtgaaatgcgtagatattggaaggaacaccgatggcgaagg--cagctttctgggtcgatactgacgctcatgtgcgaaagcgtgggg-agcaaacaggattagataccctggtagtccacgccctaaacgatgtcaactaggcgtcgggttgtt----------aaagactcggtgccggagctaacgcattaagtt-gaccgcctggggagtacggccgc-aaggttgaaactcaaa-gaaattgac-ggggacccgcacaagcggtggagcatgtggtttaattcgatgcaacgcgaagaaccttaccaggccttgac-atcctaggaacttggcagagatgccttggtgccttcgggaacct-agagacaggtgttgcatggc-tgt-cgtcagctcgtgtcgtg--agatgttgggttaagtc-ccgcaacgagcgcaacccttatccttacttgccagca-ctttg-ggtgggaactgtaaggagactgccggtgacaaaccggaggaaggtggggatgacgtcaagtcatcatggcccttacggcctgggctacacacgtgctacaatggtcggtacagacggtagcgaagc--cgcgaggtggagccaatctgagaaagccgatcgtagtccggattgcagtctgcaactcgactgcatgaagtcggaatcgctagtaatcgcgaatcagca-tgtcgcggtgaatacgttcccgggtcttg-tacacactgcccgtcacaccatgggagtttgttgcaccagaagcaggtagcttaactt--------aggagggcgctt-gccacggtgtggccgatgactggggtgaagtcgtaacaaggtaaccgtaggggaacctgcggttggatcacct------ 'EU124668.1.1486_Thioalkalibacter_halophilus' -----------gtttga-tcctggctcagattgaa-cgctggcggcatgcttaac-acatgc-aagtcgaacggaaacgatg-----------------------ggag----------------------------------------------------------------------cttgct-------cccaggcgtcgagtggcggacgggtgagtaacacatgggaatctgccctta-ggtgggggataacacgcggaaacgtgtgctaataccgcataatctcttc-----------------ggagcaaagcggg-----ggatc--------ttc------g--gacctcgcgccaaag-gatgagcccatgtctgattagctagttggtgaggtaatggcttacc--aaggcgacgatcagtagccggcctgagagggtggacggccacactgggactgagacacggcccagactcctacggg-aggcagcagtg--gggaa-tattggacaatgggggaaaccctgatccagcaatgccgcgtgtgtgaagaaggcctgcgggttgtaaagcacttttattgaggaagaataggttgtcg-ttaatagcgcc-aaca-cttgacattactcaaagaataagcaccggctaactccgtgccagcagccgcggtaatacggagggtgcgagcgttaatcggaattactgggcgtaaagcgt-gcgtaggcggatatttaagtctgatgtgaaagccctgggcttaacctgggaatggcattggaaactgaatatct-agagtgtggtagaggatagtggaatt-tccagtgtagcggtgaaatgcgtagatattggaaagaacaccgatggcgaagg--cagctatctgggccaacactgacgctgaggtacgaaagcgtgggt-agcaaacaggattagataccctggtagtccacgccctaaacgatgtcaacttgtcgttgggggaatt-------a-aatccttcagtgacggagctaacgcgttaagtt-gaccgcctggggagtacggccgc-aaggttgaaactcaaa-ggaattgac-gggggcccgcacaagcggtggagcatgtggtttaattcgatgcaacgcgaagaaccttacctggtcttgac-atcctgcgaactttccagaaatggattggtgccttcgggaacgc-agtgacaggtgctgcatggc-tgt-cgtcagctcgtgtcgtg--agatgttgggttaagtc-ccgcaacgagcgcaacccctatccttagttgccagcg-attcg-gtcgggaactctagggagactgccggtgacaaaccggaggaaggtggggatgacgtcaagtcatcatggcccttatgaccagggctacacacgtgctacaatggtcggtacagagggttgccaagc--cgcgaggtggagctaatcctccaaagccgatcttagtccggattggagtctgcaactcgactccatgaagtcggaatcgctagtaatcgtggatcagcattgccacggtgaatacgttcccgggccttg-tacacaccgcccgtcacaccatgggagtgggttgcaccagaagtagctagtctaaccttc------gggaggacggct-accacggtgtgattcatgactggggtgaagtc----------------------------------------------- 'JN175334.1.1533_Halothiobacillus_neapolitanus' -------tagagtttga-tcatggctcagattgaa-cgctggcggcatgcttaac-acatgc-aagtcgaacggtaacag---------------------------------------------------------------------------------------------------gccttc-------gggcgctgacgagtggcggacgggtgagtaatacatgggaatctgccctta-ggtgggggataacgttgggaaactaacgctaataccgcataacctcttt-----------------ggagcaaagcgtg-----ggatc--------ttc------g--gaccacgtgccaaag-gatgagcccatgtctgattagctagttggtgaggtaacggctcacc--aaggcgacgatcagtagccggcctgagagggtgtacggccacactgggactgagacacggcccagactcctacggg-aggcagcagtg--gggaa-tattggacaatgggggcaaccctgatccagcaatgccgcgtgtgtgaagaaggcctgcgggttgtaaagcacttttgttgaggaagaatgtgtttggg-ttaatagtcca-aatg-cttgacgttactcaaagaaaaagcaccggctaactccgtgccagcagccgcggtaatacggagggtgcaagcgttaatcggaattactgggcgtaaagcgt-gcgtaggcggaattttaagtctgatgtgaaatccccgggcttaacctgggaactgcattggatactgggattct-agagtatggtagagggtggcggaatt-tctggtgtagcggtgaaatgcgtagatatcagaaagaacaccaatggcgaagg--cagccacctgggccaatactgacgctgaggtacgaaagcgtgggg-agcaaacaggattagataccctggtagtccacgccctaaacgatgtctacttgtcgtcgggagggct-------a-aacctttcggtgacggagctaacgcattaagta-gaccgcctggggagtacggccgc-aaggttgaaactcaaa-ggaattgac-gggggcccgcacaagcggtggagcatgtggtttaattcgatgcaacgcgaaaaaccttacctggccttgac-atcctgcgaactttctagagatagattggtgccttcgggagcgc-agagacaggtgctgcatggc-tgt-cgtcagctcgtgtcgtg--agatgttgggttaagtc-ccgcaacgagcgcaacccttatctttagttgccagca-cgttatggtgggaactctaaagagactgccggtgacaaaccggaggaaggtggggatgacgtcaagtcatcatggcccttatggccagggctacacacgtgctacaatggtcggtacagagggtagccaaac--cgcgaggtggagccaatcccataaagccgatcttagtccggattgcagtctgcaactcgactgcatgaagtcggaatcgctagtaatcgtggatcagcattgccacggtgaatacgttcccgggccttg-tacacaccgcccgtcacaccatgggagtttgttgcaccagaagtaggtagcttaaccgta------aggagggcgctt-accacggtgtggccgatgactggggtgaagtcgtaacaaggtagccgtaggggaacctgcggttggatcacctcctta- 'AF170419.1.1494_Halothiobacillus_kellyi' -------tagagtttga-tcatggctcagattgaa-cgctggcggcatgcttaac-acatgc-aagtcgaacggcagcacg------------------------ggtg----------------------------------------------------------------------cttgc--------acctggtggcgagtggcggacgggtgagtaatgcatggaaatctgccctga-ggtgggggacaacgttgggaaactaacgctaataccgcataacctcttt-----------------ggagcaaagcagg-----ggatc--------ttc------g--gaccttgtgccttgg-gatgagtccatgtcggattagctagttggtggggtaaaggcctacc--aaggcgacgatccgtagccggcctgagagggtggtcggccacactgggactgagacacggcccagactcctacggg-aggcagcagtg--gggaa-tattggacaatgggggcaaccctgatccagcaatgccgcgtgtgtgaagaaggcctgcgggttgtaaagcacttttgtcagtgaagaacaggtttagg-ttaataccctg-aaca-cttgacgttaactgaagaataagcaccggctaactccgtgccagcagccgcggtaatacggagggtgcgagcgttaatcggaattactgggcgtaaagcgt-gcgtaggcggatgattaagtctgatgtgaaatccccgggctcaacctgggaattgcattggatactggtcgtct-agagtatggtagagggaagtggaatt-tccggtgtagcggtgaaatgcgtagatatcggaaagaacaccaatggcgaagg--caacttcctgggccaatactgacgctgaggtacgaaagcgtgggg-agcaaacaggattagataccctggtagtccacgccctaaacgatgtcgacttgtcgttgggagggtt-------t-agcctttcagtgacggagctaacgcgttaagtc-gaccgcctggggagtacggccgc-aaggttgaaactcaaa-ggaattgac-gggggcccgcacaagcggtggagcatgtggtttaattcgatgcaacgcgaaaaaccttacctggccttgac-atcctcggaacttaccagagatggtttggtgccttcgggaaccg-agtgacaggtgctgcatggc-tgt-cgtcagctcgtgtcgtg--agatgttgggttaagtc-ccgcaacgagcgcaacccttgtctctagttgccagca-cttcg-ggtgggaactctagagagactgccggtgacaaaccggaggaaggtggggatgacgtcaagtcatcatggcccttatggccagggctacacacgtgctacaatgggcggtacagagggtagccaacc--cgcgagggggagccaatcccacaaagccgctcctagtccggattggagtctgcaactcgactccatgaagtcggaatcgctagtaatcgtggatcagcattgccacggtgaatacgttcccgggccttg-tacacaccgcccgtcacaccatgggagtgggttgcaccagaagtagctagtctaaccttc------gggaggacggtt-accacggtgtgattcatgactggggtgaagtcgtaaca----------------------------------------- 'AY928394.1.1518_Francisella_philomiragia' --------agagtttga-tcatggctcagattgaa-cgctggtggcatgcttaac-acatgc-aagtcgaacggtaacag---------------------------------------------------------------------------------------------------gtcttc-------ggatgctgacgagtggcggacgggtgagtaacgcgtaggaatctgcccatt-tgagggggataccagttggaaacgactgttaataccgcataatatctgt-----------------ggattaaaggtggct-------------------------t--aggctgccgcagatg-gatgagcctgcgttggattagctagttggtggggtaagggcctacc--aaggctacgatccatagctgatttgagaggatgatcagccacattgggactgagacacggcccaaactcctacggg-aggcagcagtg--gggaa-tattggacaatgggggaaaccctgatccagcaatgccatgtgtgtgaagaaggctctagggttgtaaagcactttagttggggaggaaagcctataag-ttaatagcttg-tagg-aaggacgttacccaaagaataaggaccggctaactccgtgccagcagccgcggtaatacggggggtccgagcgttaatcggaattactgggcgtaaagggt-ctgtaggtggtttgttaagtcagatgtgaaagcccagggctcaaccttggaactgcatttgatactggcaaact-agagtatggtagaggaatggggaatt-tctggtgtagcggtgaaatgcgtagagatcagaaggaacaccaatggcgaagg--caacattctggaccaatactgacactgagggacgaaagcgtgggg-atcaaacaggattagataccctggtagtccacgctgtaaacgatgagtactagctgttggattcggtg------taaaggatctagtggcgcagctaacgcgttaagta-ctccgcctggggactacggccgc-aaggctaaaactcaaa-ggaattgac-ggggacccgcacaagcggtggagcatgtggtttaattcgatgcaacgcgaagaaccttacctggtcttgac-atcctgcgaactttctagagatagattggtgccttcgggaacgc-agtgacaggtgctgcacggc-tgt-cgtcagctcgtgttgtg--aaatgttgggttaagtc-ccgcaacgagcgcaacccctattgatagttaccatca---ttaagttgggtactctattgagactgccgctgacaaggcggaggaaggtggggacgacgtcaagtcatcatggcccttacgaccagggctacacacgtgctacaatgggtattacagagggctgcgaagg--tgcgagctggagcgaaactcagaaaggtactcttagtccggattgcagtctgcaactcgactgcatgaagtcggaatcgctagtaatcgcaggtcagaa-tactgcggtgaatacgttcccgggtcttg-tacacaccgcccgtcacaccatgggagtgggttgctccagaagtagatagcttaac----------gaatgggcgttt-accacggagtgattcatgactggggtgaagtcgtaacaaggtagccgtaggggaacctgcggctggatcacctcctt-- 'AY102612.1.1544_Caedibacter_taeniospiralis' ---------------------------a?attgaa-cgctggtggtatgcttaac-acatgc-aagtcgagcggtctaggaactagatactagaaactagaaactaggggttgaatcgctgctttat?ctaaagaatcaccttgcttgataaggttcgacttccactttctagtttctagtctct-------agtttctagatagcggcggacgggtgagtaacgcgtaggaatctgccgtac-agaggggaacaacagatggaaacgtctgctaataccgcatgaagcctga-----------------gggtgaaag---------------------gtcg------c--gcaacgtcgctgtat-gatgagcctgcgttggattagctggttggtgaggtaaaggctcacc--aaggcgatgatccatagctgttctgagaggaagatcagccacactgggactgagacacggcccagactcctacggg-aggcagcagtg--gggaa-tattggacaatgggggcaa-cctgatccagcaataccacgtgtgtgaagaaggccttagggttgtaaagcactttagttcgtgaggaaggctatcagg-ttaagagctgg-atag-tttgacgttagcgaaagaataagcaccggcaaactccgtgccagcagccgcg--tatacggagggtgcgagcgttaatcggaatgactgggcgtaaagggt-tcgtaggtggtcagataagtcagatgtgaaatacctgggctcaacctgggagggtcatttgaaactgtttgact-agagtttactagaggattggggaatt-tccggtgtagcggtgaaatgcgtagagatcggaaggaacatcaatggcgaagg--caacaatctggggttgaactgacactgagggacgaaagcgtgggg-atcaaacaggattagataccctggtagtccacgctgtaaacgatgagtactagctgttggtcctggtg------taaaaggattagtggcgcagcaaacgcgataagta-ctccgcctggggactacggccgc-aaggttaaaactcaaa-ggaattgac-ggggaccc-cacaagcggtggagcatgtggtttaattcgatgcaacgcgaagaaccttacctgcccttgac-atccatagaagacgagagagattttgttgtg-cttcgggaacta-tgagacaggtgctgcatggc-tgt-cgtcagctcgtgttgtg--aaatgttgggttaagtc-ccgcaacgagcgcaacccttatttttagttgccatca---ttaagttgggcactctagagagactgccgctgataaggcggaggaaggtggggacgacgtcaagtcatcatg---cttacgggcagggctacacacgtgctacaatgggcattacagagggaggcgaagg--tgcgagctgaagcgaaactcagaaaggtgttcgtagtccggattgcgctctgcaactcgagcgcatgaagtcggaatcgctagtaatcgcggatcagcatgcccgcggtgaatacgttcccgggtcttg-tacacaccgcccgtcacaccatgggagcgggttgcaaaagaagtagatagtctaaccgta------agggggacgttt-accactttgtgattgatgactggggtg---------------------------------------------------- 'U36941.1.1534_Piscirickettsia_salmonis' --------agagtttga-tcctggctcagattgaa-cgctggtggcatgcttaac-acatgc-aagtcgaacggtagcagat-----------------------ctag----------------------------------------------------------------------cttgct-------agatgctgacgagtggcggacgggtgagtaacgcgtgggaatttacctttt-agtgggggataactttaggaaactgaagctaataccgcataagacctga-----------------gggttaaagaggg-----cctcta------ttta------t--aagctcttgctagga-gatgagcccgcgttggattagctagttggtagggtaaaggcttacc--aaggcgacgatccatagctggtttgagagaatggccagccacactgggactgagacacggcccagactcctacggg-aggcagcagtg--gggaa-tattggacaatggggggaaccctgatccagcaatgccacgtgtgtgaagaaggccttagggttgtaaagcactttcagcggggaggaaggtaagctaa-ttaatacttgg-ctta-attgacgttacctgcagaagaagcaccggctaactccgtgccagcagccgcggtaatacggagggtgcgagcgttaatcggaattactgggcgtaaagggc-gcgtaggcggaagattaagttggatgtgaaatcccagggctcaaccttggaactgcatccgaaactggtattct-agagtatggtagaggaaagtggaatt-tcaggtgtagcggtgaaatgcgtagatatctgaaggaacaccggtggcgaagg--cgactttctggatcaatactgacgctgaggcgcgaaagcatgggt-agcgaacaggattagataccctggtagtccatgctgtaaacgatgtcaactagccgttggattccct-------tgaggagtttagtggcgtagctaacgcgataagtt-gaccgcctggggagtacggccgc-aaggttaaaactcaaa-ggaattgtc-gggggccc-cacaagcggtggagcatgtggtttaattcgat-caacgcgaagaaccttacctggtcttgac-atcctaagaattct-cagagatgcggaagtgccttcgggagctt-agagacaggtgctgcatggc-tgt-cgtcagctcgtgtcgtg--agatgttgggttaagtc-ccgcaacgagcgcaacccttatccttagttgccagca-cgtgatggtgggaactctagggagactgccggtgataaaccggaggaaggtggggacgacgtcaagtcatcatggcccttacgaccagggctacacacgtgctacaatggggcgtacagacggaggcgaagc--agcgatgtggagcgaacctgagaaagcgcctcgtagtccggattggagtctgcaactcgactccatgaagtcggaatcgctagtaatcgcgaatcagca-tgtcgcggtgaatacgttcccgggccttg-tacacaccgcccgtcacaccatgggagtgaattgcaccagaaggggctaggctaacttta------gggaggccggtc-accacggtgtggttcatgactggggtgaagtcgtaacaaggtagccgtaggggaacctgcggctggatcacctcctt-- 'Z32637.1.1418_Fluoribacter_dumoffii' ---------------------------------------------------taac-acatgc-aagtcgaacggcagcacggt----------------------ctag----------------------------------------------------------------------cttgct------agatgggtggcgagtggcgaacgggtgagtaacgcgtaggaatatgccttga-agtgggggacaacttggggaaactcaagctaataccgcataatgtctaa-----------------ggacgaaagctgg-----ggacct-------ttt------a--ggcctggcgctttaa-gattagcctccgtccgattagctagttggtggggtaagggcctacc--aaggcgacgatcggtagctggtctgagaggatggccagccacactggaactgagacacggtccagactcctacggg-aggcagcagtg--gggaa-tattggacaatgggggcaaccctgatccagcaatgccgcgtgtgtgaagaaggcctgagggttgtaaagcactttcagtggggaggagggttgatagg-ttaagagctaa-ttaa-ctggacgttacccacagaagaagcaccggctaactccgtgccagcagccgcggtaatacggagggtgcaagcgttaatcggaattactgggcgtaaagcgt-gcgtaggtggttgattaagttatctgtgaaatccctgggcttaacctgggcaggtcagatgatactggttgact-cgagtatgggagagggtagtggaatt-tccggtgtagcggtgaaatgcgtagagatcggaaggaacaccagtggcgaagg--cggctacctggcctaatactgacactgaggcacgaaagcgtgggg-agcaaacaggattagataccctggtagtccacgccgtaaacgatgtcaactagctgttggatatatg-------a-aaatatttagtggcgcagcaaacgcgataagtt-gaccgcctggggagtacggtcgc-aagattaaaactcaaa-ggaattgac-gggggcccgcacaagcggtggagcatgtggtttaattcgatgcaacgcgaagaaccttacctacccttgac-atacagtgaattttgcagagatgcattagtgccttcgggaacac-tgatacaggtgctgcatggc-tgt-cgtcagctcgtgtcgtg--agatgttgggttaagtc-ccgtaacgagcgcaacccttgtccttagttgccagcg-cgtaaaggcgggaactctaaggagactgccggtgacaaaccggaggaaggcggggatgacgtcaagtcatcatgg--cttacgggtagggctacacacgtgctacaatgggtgatacagaggg-aacgaagg--ggtgacctggagctaatcttagaaagtcgctcgtagtccggattggagtctgcaactcgactccatgaagtcggaatcgctagtaatcgcgaatcagca-tgtcgcggtgaatacgttcccgggccttg-tacacaccgcccgtcacaccatgggagtgggctgcaccagaagtagatagtctaaccttc------gggaggacgttt-ac----------------------------------------------------------------------------- 'Z49738.1.1472_Legionella_wadsworthii' atcta--------------------------ttcg-cgctggcggcatgcttaac-acatgc-aagtcgaacggcagcatggt----------------------ctag----------------------------------------------------------------------cttgct------agactgatggcgagtggcgaacgggtgagtaacgcgtaggaatatgccttga-agtgggggacaacttggggaaactcaagctaataccgcataatatcttt-----------------ggatgaaagctgg-----ggacc--------ttc------g--ggcctggcgctttaa-gattagcctgcgtccgattagctagttggtggggtaagggcctacc--aaggcgacgatcggtagctggtctgagaggatggccagccacactggaactgagacacggtccagactcctacggg-aggcagcagtg--gggaa-tattggacaatggggggaaccctgatccagcaatgccgcgtgtgtgaagaaggcctgagggttgtaaagcactttcagtggggaggagggtttatagg-ttaagagctaa-taag-ttggacgtcacccacagaagaagcaccggctaactccgtgccagcagccgcggtaatacggagggtgcaagcgttaatcggaattactgggcgtaaagcgt-gcgtaggtggttgattaagttatctgtgaaatccccgggcttaacctgggcaggtcagataatactggttgact-cgagtatgggagagggtagtggaatt-tccggtgtagcggtgaaatgcgtagagatcggaaggaacaccagtggcgaagg--cggctacctggcctaatactgacactgaggcacgaaagcgtgggg-agcaaacaggattagataccctggtagtccacgctgtaaacgatgtcaactagctgttggttatatg-------a-aaataattagtggcgcagcaaacgcgataagtt-gaccgcctggggagtacggtcgc-aagattaaaactcaaa-ggaattgac-gggggcccgcacaagcggtggagcatgtggtttaattcgatgcaacgcgaagaaccttacctacccttgac-atacagtgtagcttgcagagatgcattagtgccttcgggaacac-tgatacaggtgctgcatggc-tgt-cgtcagctcgtgtcgtg--agatgttgggttaagtc-ccgtaacgagcgcaacccttat-cttagttgccagcc-cgta--ggtgggaactctagggagactgccggtgacaaaccggaggaaggcggggatgacgtcaagtcatcatggcccttacgggtagggctacacacgtgctacaatgg-tggtacagagggaagcgaagg--ggtgacctggagctaatcttagaaagtcgctcgtagtccggattggagtctgcaactcgactccatgaagtcggaatcgctagtaatcgcgaatcagca-tgtcgcggtgaatacgttcccgggccttg-tacacaccgcccgtcacaccatgggagtgggctgcaccagaagtagatagtctaaccttc------gggaggacgttt-accacggtgtggttcatgactggggtgacgtcgc--------------------------------------------- 'AF227161.1.1474_Tatlockia_maceachernii' -------------------------------tgaa-cgctggcggcatgcttaac-acatgc-aagtcgaacggcagcacggt----------------------ctag----------------------------------------------------------------------tttact------agatgggtggcgagtggcgaacgggtgagtaacgcgtaggaatatgccttaa-agtttgggataacatggggaaactcatgctaataccggatgagctctta-----------------ggaggaaagctgg-----ggacca------ttta------t--ggcctggcgctttaa-gattagcctgcgtccgattagctagttggtggggtaagggcctacc--aaggcgacgatcggtagctggtctgagaggatgatcagccacactgggactgagacacggcccagactcctacggg-aggcagcagtg--gggaa-tattggacaatggggggaaccctgatccagcaatgccgcgtgtgtgaagaaggcctgagggttgtaaagcactttcagtggggaggagggatgatagg-ttaagagctaa-ttat-ctggacgttacccacagaagaagcaccggctaactccgtgccagcagccgcggtaatacggagggtgcgagcgttaatcggaattactgggcgtaaagggt-gcgtaggtggtttagtaagttatctgtgaaattcctgggctcaacctagggtggtcagataagactgctggactaagagtataggagagggtagtggaatt-tccggtgtagcggtgaaatgcgtagagatcggaaggaacaccagtggcgaagg--cggctacctggcctaatactgacactgaggcacgaaagcgtgggg-agcaaacaggattagataccctggtagtccacgctgtaaacgatgtcaactagttgttggccttatg-------a-atgaggttagtgacgaagcaaacgcgataagtt-gaccgcctggggagtacggtcgc-aagattaaaactcaaa-ggaattgac-gggggcccgcacaagcggtggagcatgtggtttaattcgatgcaacgcgaagaaccttacctacccttgac-atacagtgaattctgcagagatgcggaagtgccgcgaggagcac-tgctacaggtgctgcatggc-tgt-cgtcagctcgtgtcgtg--agatgttgggttaagtc-ccgtaacgagcgcaacccttattcttagttaccatcg-cgtagaggcggggactctaaggagactgccggtgacaaaccggaggaaggcggggatgacgtcaagtcatcatggcccttacgggtagggctacacacgtgctacaatggccggtacagagggcggcgaagg--ggtgacctggagcaaatctttgaaagctggtcgtagtccggattggagtctgcaactcgactccatgaagtcggaatcgctagtaatcgcgaatcagca-tgtcgcggtgaatacgttcccgggccttg-tacacaccgcccgtcacaccatgggagtgggttgcaccagaagtagatagtctaacctta------ggggggacgttt-accacggtgtgattcatgactggggtgaagtcgt--------------------------------------------- 'X72776.1.1468_Methylomonas_aurantiaca' -??actgaagagtttga-tcatggctcagattgaa-cgctggcggtatgcttaac-acatgc-aagtcgaacggtaat-----------------------------ag----------------------------------------------------------------------gccttc-------gggcgctgacgagtggcggacgggtgagtaatgcctcggaatctgccatgt-tgtgggggataacttggggaaactcttgctaataccgcatacgatctac-----------------ggatgaaagcggg-----ggacc--------ttc------g--ggcctggcgctaata-gatgagcctatgttggattagctagttggtggggtaaaggcttacc--taggcgacgat?cgtagctggtctgagaggatgatcagccacactgggactgagacagggcccagactcctactgg-aggcagcagtg--gggaa-tattggacaatgggcgaaagcctgatccagcaatgccgcgtgtgtgaagaaggcctgagggttgtaaagcactttcaataggaaggaatacctgccgg-ttaatacccgg-taga-cttgacattacctatacaagaagcaccggctaactccgtgccagcagccgcggtaatacggagggtgcaagcgttaatcggaattactgggcgtaaagcgt-gcgtaggcggtgatttaagtcagatgtgaaagccctgggcttaacctgggaactgcatttgatactgggtcact-agagttgagtagaggggagtggaatt-tcaggtgtagcggtgaaatgcgtagagatctgaaggaacaccagtggcgaagg--cggctctctggactcaaactgacgctgaggtacgaaagcgtgggt-agcaaacaggattagataccctggtagtccacgccgtaaacgatgtcaactaactgttgggttattt---------aagaacttagtagtggagctaacgtattaagtt-gaccgcctggggagtacggccgc-aaggctaaaactcaaa-tgaattgac-gggggcccgcacaagcggtggagcatgtggtttaattcgatgcaacgcgaagaaccttacctacccttgac-atccagaggatctgttagagatagcggagtgccttcgggagctg-tgagacaggtgctgcatggc-tgt-cgtcagcccgtgttgtg--aaatgttgggttaagtc-ccgcaacgagcgcaacccttatccttagttgccagcg-agtaatgtcgggaactctagggagactgccggtgataaaccggaggaaggtggggacgacgtcaagtctatatggcccttatgggtagggctacacacgtgctacaatggccggtacagagggcagcgaaac--cgtgaggtcaagcaaatcccacaaagccggtcgtagtccggattgcactctgcaactcgactgcatgaagtcggaatcgctagtaatcgcggatcagaa-tgccgcggtggatacgttcccgggccttg-tacacaccgcccgtcacaccatgggagtgggttgcaaaagaagtaggtagctaaaccttc------gggagggcgctt-accactttgtg-------------------------------------------------------------------- 'AF304196.1.1499_Methylomonas_methanica' --------agagtttga-tcatggctcagattgaa-cgctggcggtatgcttaac-acatgc-aagtcgaacggtaac-----------------------------ag----------------------------------------------------------------------gccttc-------gggcgctgacgagtggcggacgggtgagtaacgcgtaggaatctgcctcat-agtgggggacaacttggggaaactcaagctaataccgcatacgccctac-----------------gggggaaagcggg-----ggacc--------ttc------g--ggcctcgcgctatga-gatgagcctgcgttggattagctagttggtagggtaccggcctacc--aaggcgacgatccatagctggtctgagaggatgatcagccacactgggactgagacacggcccagactcctacggg-aggcagcagtg--gggaa-tattggacaatgggcgaaagcctgatccagcaataccgcgtgtgtgaagaaggcctgagggttgtaaagcactttcaataggaaggaatacctgccgg-ttaatacccgg-taga--ctgacattacctatacaagaagcaccggctaactccgtgccagcagccgcggtaatacggagggtgcaagcgttaatcggaattactgggcgtaaagcgt-gcgtaggcggttgtttaagtcagatgtgaaagccctgggcttaacctgggaactgcatttgatactgggcaact-agagtttagtagaggggagtggaatt-tcaggtgtagcggtgaaatgcgtagagatctgaaggaacaccagtggcgaagg--cggctccctggactaaaactgacgctgaggtacgaaagcgtgggt-agcaaacaggattagataccctggtagtccacgccgtaaacgatgtcaactaactgttgggttctta---------aagaacttagtagtggagctaacgtattaagtt-gaccgcctggggagtacg?ccgc-aaggttaaaactcaaa-??aattgac-gggggcccgcacaagcggtggagcatgtggtttaattcgatgcaacgcgaagacccttacctacccttgac-atccagagaatctgttagagatagcggagtgccttcgggagctc-tgagacaggtgctgcatggc-tgt-cgtcagctcgtgttgtg--aaatgttgggttaagtc-ccgtaacgagcgcaacccttatccttagttgccagcg-ggtcatgccgggaactctagggagactgccggtgataaaccggaggaaggtggggacgacgtcaagtcatcatggcccttatgggtagggctacacacgtgctacaatggccggtacagagggctgcgaact--cgcgagagtaagctaatcccaaaaagccggtcccagtccggatcgcagtctgcaactcgactgcgtgaagtcggaatcgctagtaatcgcggatcagaa-tgccgcggtgaatacgttcccgggccttg-tacacaccgcccgtcacaccatgggagtgggttgcaaaagaagtaggtagtttaaccttc------gggagggcgctt-accactttgtgattcatgactggggtgaagtcgtaacaaggtaaccgtaa----------------------------- 'X72773.1.1470_Methylobacter_whittenburyi' -????????gagtttga-tcatggctcagattgaa-cgctggcggtatgcttaac-acatgc-aagtcgaacggtaac-----------------------------ag----------------------------------------------------------------------gccttc-------gggcgctgacgagtggcggacgggtgagtaatgcgtaggaatctgcctagt-agtgggggataacttggggaaactcaagctaataccgcatacgccctac-----------------gggggaaagcggg-----ggacc--------ttc------g--ggcctcgcgctatga-gatgagcctgcgttagattagctagttggtggggtaaaggcctacc--aaggcgacgatctatagctggtctgagaggacgatcagccacactgggactgagacacggcccagactcctacggg-aggcagcagtg--gggaa-tattggacaatgggcgcaagcctgatccagcaatgccgcgtgtgtgaagaaggcctgagggttgtaaagcactttcaatagggaggaaaacctgccgg-ttaatacccgg-caga-cttgacattacctatagaagaagcaccggctaactccgtgccagcagccgcggtaatacggagggtgcaagcgttaatcggaattactgggcgtaaagcgt-gcgtaggcggttaggtaagtcagatgtgaaagccccgggcttaacctgggaactgcatttgatactgggtaact-agagtttaatagaggagagtggaatt-tcaggtgtagcggtgaaatgcgtagagatctgaaggaacaccagtggcgaagg--cgcctctctggacacaaactgacgctgaggtacgaaagcgtgggg-agcaaacaggattagataccctggtagtccacgccgtaaacgatgtcaactagccgttggtcttatt-------c-gtaagattcgtggcg-cactaacgcgataagtt-gaccgcctggggagtacggccgc-aaggttaaaactcaaa-tgaattgac-gggggcccgcacaagcggtggagcatgtggtttaattcgatgcaacgcgaagaaccttacctacccttgac-atccatggaatctgtgagagatagtagagtgccttcgggaactc-tgagacaggtgctgcatggc-tgt-cgtcagctcgtgtcgtg--agatgttgggttaagtc-ccgtaacgagcgcaacccttatccttagttgccagca-cgtgatggtgggaactctagggagactgccggtgataaaccggaggaaggtggggacgacgtcaagtcatcatggcccttatgggtagggctacacacgtgctacaatggccggtacagagggcagcgaact--tgcgaaagtcagccaatcccaaaaagccggtcgtagtccggattggagtctgcaactcgactccatgaagtcggaatcgctagtaatcgcgaatcagaa-tgtcgcggtgaatacgttcccgggccttg-tacacaccgcccgtcacaccatgggagtgggttgcaaaagaagtgggtagtctaaccttc------gggagggcgctc-accactttgtgat------------------------------------------------------------------ 'X72767.1.1469_Methylomicrobium_agile' -?tactgaagagtttga-tcatggctcagattgaa-cgctggcggtatgcttaac-acatgc-aagtcgaacggtaac-----------------------------ag----------------------------------------------------------------------gccttc-------gggcgctgacgagtggcggacgggtgagtaatgcgtaggaatctgcctagt-agtgggggataacttggggaaactcaagctaataccgcatacgccctac-----------------gggggaaagcggg-----?gacc--------ttc------g--ggcct?gcgctatga-gatgagcctgcgtgggattagctagttggtagggtaaaggcctacc--aaggcgacgatccctagctggtctgagaggacgatcagccacgctgggactgagacacggcccagactcctacggg-aggcagcagtg--gggaa-tattggacaatgggcgcaagcctgatccagcaatgccgcgtgtgtgaagaaggcctgagggttgtaaagcactttcaataggaaggaaaacctgccgg-ttaatacccgg-caga-cttgacattacctatagaagaagcaccggctaactccgtgccagcagccgcggtaatacggagggtgcaagcgtta?tcggaattactgggcgtaaagcgt-gcgtaggcggctccttaagtcagatgtgaaagccccgggcttaacctgggaactgcatttgatactgggtaact-cgagttgagtagaggagaggggaatt-tccggtgtagcggtgaaatgcgtagagatctgaaggaacaccagtggcgaagg--cgcctctctggcctcaaactgacgctgaggtacgaaagcgtgggg-agcaaacaggattagataccctggtagtccacgccgtaaacgatgtcaactagccgttggtctttat-------a-aaggttttcgtggcg-cactaacgcgttaagtt-gaccgcctggggagtacggccgc-aaggttaaaactcaaa-tgaattgac-gggggcccgcacaagcggtggagcatgtggtttaattcgatgcaacgcgaagaaccttacctacccttgac-atccagagaatctgtgagagatcgtagagtgccttcggcaactc-tgagacaggtgctgcatggc-tgt-cgtcagctcgtgtcgtg--agatgttgggttaagtc-ccgcaacgagcgcaacccttatccttagttgccaaca-cgtgatgctgggaactctagggagactgccggtgataaaccggaggaaggtggggacgacgtcaagtcatcatggcccttatgggtagggctacacacgtgctacaatggccggtacagagggcagcgaact--cgcgagagccagccaatcccacaaagccggtcgtagtccggattggagtctgcaactcgactccatgaagtcggaatcgctagtaatcgcgaatcagaa-tgtcgcggtgaatacgttcccgggccttg-tacacaccgcccgtcacaccatgggagtgggttgcaaaagaagtgggtagtctaaccttc------gggagggcgctt-accactttgtga------------------------------------------------------------------- 'U67929.1.1451_Methylosphaera_hansonii' ------------------------------ttgaa-cgctggcggcatgcttaac-acatgc-aagtcgaacggtaacga-------------------------gcag----------------------------------------------------------------------gcttgc-------cttcgctgacgagtggcggacgggtgcgtaacgcgtgggaatctgcctctt-agtgggggacaacacggggaaaccctcgctaataccgcatacgctctact----------------gggggaaagcggg-----ggatc--------ttc------g--ggcctc?cgctaaca-gatgagcctaagtcagattagctagttggtggggtaaaggcctacc--aaggcgacgatctgtagctggtctgagaggatgatcagccacactgggactgagacacggcccagactcctacggg-aggcagcagtg--gggaa-tattggacaatgggcgcaagcctgatccagcaatgccgcgtgtgtgaagaaggcctgagggttgtaaagcactttaagttgggaggaaaatctggcgg-ttaatagcctt-aagt-gttgacgttacctacagaagaagcaccggctaactccgtgccagcagccgcggtaatacggagggtgcaagcgttaatcggaattactgggcgtaaagcgc-gcgtaggcggttgtttaagtcagatgtgaaagccccgggcttaacctgggaactgcatttgagactggcaggct-agagtatggtagaggggagtggaatt-tcaggtgtagcggtgaaatgcgtagagatctgaaggaacaccagtggcgaagg--cgacttcctggactcatactgacgctgaggtacgaaagcgtgggt-agcaaacaggattagataccctggtagtccacgccgtaaacgatgtcaactagccgttgggtcactt-------t-acgagttttgtagcgaagctaacgtattaagtt-gaccgcctggggagtacggccgc-aaggttaaaactcaaa-tgaattgac-gggggcccgcacaagcggtggagcatgtggtttaattcgatgcaacgcgaagaaccttacctagccttgac-attcagagaatccgttagagatagtagagtgccttcggaagctc-tgacacaggtgctgcatggc-tgt-cgtcagctcgtgtcgtg--agatgttgggttaagtc-ccgcaacgagcgcaacccttgtccttagttgccagca-ggttaagctgggaactctaaggagactgccggtgataaaccggaggaaggtggggatgacgtcaagtcatcatggcccttatgggtagggctacacacgtgctacaatggctggtacagagggtagc-aaat--cgcgagagtaagctaatcccagaaagccgatcgtagtccggatcggagtctgcaactcgactccatgaagttggaatcgctagtaatcgcggatcagaa-tgctgcggtgaatacgttcccgggccttg-tacacaccgcccgtcacaccatgggagtgggttgcaaaagaagtaggtagtctaaccttc------gggagggcgctt-accactttgtgattgat-------------------------------------------------------------- 'DQ298025.1.1499_Rheinheimera_chironomi' -tggatccagactttga-ttatggctcagattgatacgctggcggcaggcctaac-acatgc-aagtcgagcgggg--------------------------------------------------------------------------------------------------------------------ttttcggacctagcggcggacgggtgagtaatgcgtaggaagctacccgac-agagggggataccagttggaaacgactgttaataccgcataatgtctac-----------------ggaccaaagtgtg-----ggacc--------ttc------g--ggccacatgctgtcg-gatgcgcctacgtgggattagctagttggtgaggtaatggctcacc--aaggcgacgatccctagctggtttgagaggatgatcagccacactggaactgagacacggtccagactcctacggg-aggcagcagtg--gggaa-tattggacaatgggcgcaagcctgatccagccatgccgcgtgtgtgaagaaggccttcgggttgtaaagcactttcagcgaggaggaagggttggtcg-ttaatagcggc-taat-cttgacgttactcgcagaagaagcaccggctaactctgtgccagcagccgcggtaatacagagggtgcaagcgttaatcggaattactgggcgtaaagcgc-acgcaggcggttggttaagtcagatgtgaaagccccgggctcaacctgggaattgcatttgaaactggccaact-agagtacgtgagaggggggtagaatt-ccaagtgtagcggtgaaatgcgtagagatttggaggaataccagtggcgaagg--cggccccctggcacgatactgacgctcaggtgcgaaagcgtgggg-agcaaacaggattagataccctggtagtccacgccgtaaacgatgtctactagctgttcgtggtctt---------gtactgtgagtagcgcagctaacgcactaagta-gaccgcctggggagtacggtcgc-aagattaaaactcaaa-tgaattgac-gggggcccgcacaagcggtggagcatgtggtttaattcgacgcaacgcgaagaaccttacctactcttgac-atctagcgaagattgtagagatacgattgtgccttcgggaacgc-taagacaggtgctgcatggcttgt-cgtcagctcgtgttgtg--aaatgttgggttaagtc-ccgcaacgagcgcaacccttatccttagttgccagca-cgtaatggtgggaactctagggagactgccggtgataaaccggaggaaggtggggacgacgtcaagtcatcatggcccttacgagtagggctacacacgtgctacaatggtacgtacagagggaggcaagct--ggcgacagtgagcggatctcttaaagcgtatcgtagtccggatcgcagtctgcaactcgactgcgtgaagtcggaatcgctagtaatcgcaaatcagaa-tgttgcggtgaatacgttcccgggccttg-tacacaccgcccgtcacaccatgggagtgggttgcaaaagaagtaggtagcttaaccttc------gggagggcgctt-accactttgtgattcatgactggggtgaagtcgtaacaagctaaccgtag----------------------------- 'X95460.1.1491_Methylophaga_thalassica' ---------------------------agattgaa-cgctggcggcatgcctaac-acatgc-aagtcgaacgatgaaga-------------------------acag----------------------------------------------------------------------cttgct--------gtttctgattagtggcggacgggtgagtaatgtatagggatctgcctagt-agtgggggacaacagccggaaacggctgctaataccgcatacgctctac-----------------ggaggaaagcggg-----ggctc--------gta------a--gacctcgtgctatta-gatgaacctatatcagattagctagttggtggggtaagggcctacc--aaggcgacgatctgtagctggtctgagaggatgatcagccacactgggactgagacacggcccagactcctacggg-aggcagcagtg--gggaa-tattggacaatgggcgcaagcctgatccagcaatgccgcgtgtgtgaagaaggccttcgggttgtaaagcactttcaatagggaggaaaggttatgcg-ttaataccgta-tagc-tgtgacgttacctatagaagaagcaccggctaactccgtgccagcagccgcggtaatacggagggtgcaagcgttaatcggaattactgggcgtaaagcgc-gcgtaggcggttatttaagtcagatgtgaaagccccgggctcaacctgggaattgcatttgatactggatggct-agagtgtggtagaggtgagtggaatt-tcaggtgtagcggtgaaatgcgtagagatctgaaggaacatcagtggcgaagg--cgactcactgggccattactgacgctgaggtgcgaaagcgtgggt-agcaaacaggattagataccctggtagtccacgccctaaacgatgtcaactaggtgtatggagaatt-------t-attctttgtgtatcgaagctaacgcgataagtt-gaccgcctggggagtacggtcgc-aagactaaaactcaaa-tgaattgac-gggggcccgcacaagcggtggagcatgtggtttaattcgatgcaacgcgaagaaccttacctggccttgac-atgtacggaagattgaagagattcgattgtgccttcgggaaccg-taacacaggtgctgcatggc-tgt-cgtcagctcgtgtcgtg--agatgttgggttaagtc-ccgcaacgagcgcaacccctgtccttagttgccatca---ttaagttgggcactctaaggagactgccggtgacaaaccggaggaaggtggggatgacgtcaagtcatcatggcccttatggccagggctacacacgtgctacaatgggcagtacaaagggttgctaact--cgcgagggtatgctaatcccataaagctgttcgtagtccggatcgcagtctgcaactcgactgcgtgaagtcggaatcgctagtaatcgcggatcagaa-tgccgcggtgaatacgttcccgggccttg-tacacaccgcccgtcacaccatgggagttggctgcaaaagaagtaggtagactaaccttc------gggaggtcgctt-accactttgtggtcaatgactggggtgaagtcgtaacaaggtagccctaggggaacc---------------------- 'U89300.1.1491_Methylocaldum_szegediense' --------agagtttga-tcatggctcagattgaa-cgctggcggcatgcttaac-acatgc-aagtcgaacggcagcacag-----------------------ccgg----------------------------------------------------------------------gtaacc-------ggtgggtggcgagtggcggacgggtgagtaatgcgtaggaatctgccttgt-agtgggggataacccggggaaactcgggctaataccgcatacgctctat-----------------ggaggaaagcggg-----ggacc--------ttc------g--ggcctcgcgctatga-gatgagcctacgtccgattagctagttggtagggtaatggcctacc--aaggcgacgatcggtagctggtctgagaggacgatcagccacactggaactgagacacggtccagactcctacggg-aggcagcagtg--gggaa-tattggacaatgggcgcaagcctgatccagcaatgccgcgtgtgtgaagaaggcctgcgggttgtaaagcactttaagcggggaagaaaggcgggagg-ctaataccctc-ttgc-actgacgttacctgcagaataagcaccggctaactccgtgccagcagccgcggtaatacggagggtgcgagcgttaatcggaattactgggcgtaaagcgc-gcgtaggcggtttgttaagtcagctgtgaaagccctgggctcaacctgggaatggcagttgatactggcgagct-tgagtgtggtagagggKtgtggaatt-tccggtgtagcagtgaaatgcgtagagatcggaaggaacaccagtggcgaagg--cggcaccctggaccaacactgacgctgaggtgcgaaagcgtgggg-agcaaacaggattagataccctggtagtccacgctgtaaacgatgagaactagccgttgggcacaat-------t-gagtgtttagtggcgcagctaacgcgataagtt-caccgcctggggagtacggccgc-aacgttaaaactcaaa-tgaattgac-gggggcccgcacaagcggtggagcatgtggtttaattcgatgcaacgcgaagaaccttacctggtcttgac-atctggggaacccttgagagatcgaggggtgccttcgggagccc-caagacaggtgctgcatggc-tgt-cgtcagctcgtgtcgtg--agatgttgggttaagtc-ccgtaacgagcgcaacccttgtccctagttgccagcg---taaagacgggaactctagggagactgccggtgataaaccggaggaaggtggggacgacgtcaagtcatcatggcccttatgaccagggctacacacgtgctacaatggtcggtacagagggtagccaagc--cgtgaggcggagccaatcccagaaagccgatcgtagtccggattgcagtctgcaactcgactgcatgcagtcggaatcgctagtaatcgcggatcagca-tgccgcggtgaatacgttcccgggccttg-tacacaccgcccgtcacaccatgggagtgggttgcaccagaagcaggtagtctaaccttc------gggagggcgctt-gccacggtgtggttcatgactggggtgaagtcgtaa------------------------------------------- 'X72771.1.1473_Methylococcus_capsulatus' -?aactgaagagtttga-tcatggctcagattgaa-cgctggcggcatgcttaac-acatgc-aagtcgaacggtaac-----------------------------ag----------------------------------------------------------------------gccttc-------gggcgctgacgagtggcggacgggtgagtaatgcgtaggaatctgccttgt-tgtgggggataactctgggaaacccgagctaataccgcatacgcttaac-----------------ggatgaaagcggg-----ggatc--------ttc------g--gacctcgcgctataa-gatgagcctgcgtcggattagctagttggtggggtaaaggcctacc--aaggcgacgatccgtagctggtctgagaggacgatcagccacactgggactgagacacggtccagactcctacggg-aggcagcagtg--gggaa-tattggacaatgggcgcaagcctgatccagcaatgccgcgtgtgtgaagaaggcctgagggttgtaaagcactttcagcaggaaagaagggcgggggt-ttaataccatg-ccca-cttgacgttacctgcagaagaagcaccggctaactccgtgccagcagccgcggtaatacggagggtgcgagcgttaatcggaattactgggcgtaaagcgc-gcgtaggcggttagataagtcagatgtgaaagccctgggcttaacctgggaactgcatttgatactgtcaggct-cgagtgtgatagagggtagtggaatt-tccggtgtagcggtgaaatgcgtagagatctgaaggaacaccagtggcgaagg--cggctccctggaccaacactgacgctgaggtgcgaaagcgtgggg-agcaaacaggattagataccctggtagtccacgccgtaaacgatgtcaactagccgttggcgggttt---------aaccctttagtggcgc-actaacgcgataagtt-gaccgcctggggagtacggccgc-aaggttaaaactcaaa-tgaattgac-gggggcccgcacaagcggtggagcatgtggtttaattcgatgcaacgcgaagaaccttacctggccttgac-atgcagggaatcctgcagagatgcgggagtgccttcgggagcca-agacacaggtgctgcatggc-tgt-cgtcagctcgtgtcgtg--agatgttgggttaagtc-ccgtaacgagcgcaacccttgtccttagttgccagcg-gttcgggctgggaactctaaggagactgccggtgataaaccggaggaaggtggggatgacgtcaagtcatcatggcccttatgggtagggctacacacgtgctacaatggccggtacagagggtagcgaagc--cgcgaggtggagcaagtcccagaaagccggtcgtagtccggattggagtctgcaactcgactccatgaagtcggaatcgctagtaatcgcggatcagaa-tgccgcggtgaatacgttcccgggccttg-tacacaccgcccgtcacaccatgggagtgggttgcaccagaagtaggtagtctaaccgca------aggagggcgctt-accacggtgtgattcat-------------------------------------------------------------- ; END; BEGIN TREES; Title Trees; ID 0156c6a9dadd13; LINK Taxa = Taxa; TRANSLATE [0] 1 'JF344692.1.1512_uncultivated_environmental_bacteria', [1] 2 'Symbiont_of_Kentrophoros_LPFa_S313', [2] 3 'Symbiont_of_Kentrophoros_UNK_BY8', [3] 4 'Symbiont_of_Kentrophoros_TC_BZ126', [4] 5 'Symbiont_of_Kentrophoros_LFY_BY7', [5] 6 'Symbiont_of_Kentrophoros_SD_S127', [6] 7 'Symbiont_of_Kentrophoros_TUN_BY2', [7] 8 'Symbiont_of_Kentrophoros_FW_BZ106', [8] 9 'Symbiont_of_Kentrophoros_FW_BZ131', [9] 10 'Symbiont_of_Kentrophoros_BT_S243', [10] 11 'Symbiont_of_Kentrophoros_FM_BZ176', [11] 12 'Symbiont_of_Kentrophoros_G_BZ185', [12] 13 'Symbiont_of_Kentrophoros_H_SA2B15', [13] 14 'Symbiont_of_Kentrophoros_FB_S136', [14] 15 'Symbiont_of_Kentrophoros_FBG_S435', [15] 16 'JQ800923.1.1507_uncultivated_environmental_bacteria', [16] 17 'EU652572.1.1506_uncultivated_environmental_bacteria', [17] 18 'JQ800972.1.1506_uncultivated_environmental_bacteria', [18] 19 'JX504483.1.1538_uncultivated_environmental_bacteria', [19] 20 'DQ513032.1.1504_uncultivated_environmental_bacteria', [20] 21 'HE817831.1.1534_uncultivated_environmental_bacteria', [21] 22 'JQ347371.1.1498_uncultivated_environmental_bacteria', [22] 23 'JN977228.1.1533_uncultivated_environmental_bacteria', [23] 24 'AB694061.1.1406_uncultivated_environmental_bacteria', [24] 25 'JF809744.1.1399_uncultivated_environmental_bacteria', [25] 26 'FN553505.1.1500_uncultivated_environmental_bacteria', [26] 27 'JF344142.1.1499_uncultivated_environmental_bacteria', [27] 28 'FJ905747.1.1417_uncultivated_environmental_bacteria', [28] 29 'JF272102.1.1499_uncultivated_environmental_bacteria', [29] 30 'KC009908.1.1512_uncultivated_environmental_bacteria', [30] 31 'GQ857549.1.1488_Diplorickettsia_massiliensis', [31] 32 'AY359282.1.1482_Aquicella_lusitana', [32] 33 'HM208383.1.1465_Coxiella_burnetii', [33] 34 'AF406554.1.1461_Alkalilimnicola_ehrlichii_MLHE-1', [34] 35 'AF114783.1.1464_Alkalispirillum_mobile', [35] 36 'AB643473.1.1507_Halorhodospira_neutriphila', [36] 37 'CP000544.952248.953785_Halorhodospira_halophila_SL1', [37] 38 'M26631.1.1487_Arhodomonas_aquaeolei', [38] 39 'HM038001.1.1482_Nitrococcus_mobilis', [39] 40 'AM404264.1.1448_Aquisalimonas_asiatica', [40] 41 'EF103127.1.1447_Natronocella_acetinitrilica', [41] 42 'AF287298.1.1539_Nitrosococcus_halophilus', [42] 43 'AY690336.1.1541_Nitrosococcus_oceani', [43] 44 'EU700082.1.1495_Ectothiorhodospira_shaposhnikovii', [44] 45 'AY298904.1.1445_Ectothiorhodosinus_mongolicus', [45] 46 'AGFD01000020.25655.27178_Thiorhodospira_sibirica_ATCC_700588', [46] 47 'AF126545.1.1465_Thioalkalivibrio_denitrificans', [47] 48 'AF329083.1.1474_Thioalkalivibrio_jannaschii', [48] 49 'DQ469584.1.1297_Thiohalophilus_thiocyanatoxydans', [49] 50 'AF481118.1.1433_Thioalkalispira_microaerophila', [50] 51 'L25709.1.1413_Solemya_reidi_gill_symbiont', [51] 52 'AJ223234.1.1391_Chromatium_okenii', [52] 53 'AGFC01000063.14993.16509_Thiocystis_violascens_DSM_198', [53] 54 'CP001896.2025534.2027048_Allochromatium_vinosum_DSM_180', [54] 55 'AJ006063.1.1393_Lamprocystis_roseopersicina', [55] 56 'EF999974.1.1500_Thiodictyon_bacillosum', [56] 57 'AF112998.1.1494_Thiocapsa_roseopersicina', [57] 58 'AM748925.1.1440_Thiophaeococcus_mangrovi', [58] 59 'FN293057.1.1451_Thiorhodococcus_minor', [59] 60 'FN293055.1.1459_Thiococcus_pfennigii', [60] 61 'X84316.1.1452_Rhabdochromatium_marinum', [61] 62 'AB016986.1.1456_Thiorhodovibrio_winogradskyi', [62] 63 'AJ002796.1.1424_Thiohalocapsa_halophila', [63] 64 'AJ006212.1.1402_Lamprocystis_purpurea', [64] 65 'X93472.1.1451_Halochromatium_glycolicum', [65] 66 'AF328856.1.1497_Olavius_algarvensis_Gamma1_endosymbiont', [66] 67 'AJ620507.1.1497_Olavius_crassitunicatus_Gamma1_endosymbiont', [67] 68 'EU439003.1.1869_Candidatus_Thiobios_zoothamnicoli', [68] 69 'AB214932.1.1414_Alviniconcha_hessleri_gill_endosymbiont', [69] 70 'AB238964.1.1409_endosymbiont_of_Ifremeria_nautilei', [70] 71 'AB245479.1.1457_Sulfurivirga_caldicuralii', [71] 72 'AB266389.1.1525_Thioprofundum_hispidum', [72] 73 'X87277.1.1516_Leucothrix_mucor', [73] 74 'FN658699.1.1505_gamma_proteobacterium_ectosymbiont_of_Rimicaris_exoculata', [74] 75 'AB042545.1.1417_Thiothrix_flexilis', [75] 76 'AJ620496.1.1501_Olavius_algarvensis_Gamma_3_endosymbiont', [76] 77 'AM236327.1.1503_thiotrophic_bacterial_endosymbiont_of_Bathymodiolus_heckerae', [77] 78 'CP000488.1081270.1082807_Candidatus_Ruthia_magnifica_str._Cm_Calyptogena_magnifica', [78] 79 'FN822779.1.1494_thiotrophic_endosymbiont_of_Bathymodiolus_mauritanicus', [79] 80 'AY951931.1.1495_Bathymodiolus_azoricus_thioautotrophic_gill_symbiont', [80] 81 'U77481.1.1459_Lamellibrachia_columna_endosymbiont', [81] 82 'U77482.1.1452_Escarpia_spicata_endosymbiont', [82] 83 'U77478.1.1461_endosymbiont_of_Riftia_pachyptila', [83] 84 'AF432145.1.1540_Sedimenticola_selenatireducens', [84] 85 'FM211773.1.1500_uncultured_Codakia_orbicularis_gill_symbiont', [85] 86 'AM418384.1.1521_Pseudoxanthomonas_spadix', [86] 87 'AB558557.1.1421_Xanthomonas_theicola', [87] 88 'AB166878.1.1474_Lysobacter_koreensis', [88] 89 'EF660758.1.1409_Luteimonas_aestuarii', [89] 90 'FR749910.1.1534_Xanthomonas_perforans', [90] 91 'U62646.1.1452_Stenotrophomonas_maltophilia', [91] 92 'AF192343.1.1537_Xylella_fastidiosa', [92] 93 'DQ239766.1.1488_Arenimonas_malthae', [93] 94 'AF110274.1.1491_Beggiatoa_alba_B18LD', [94] 95 'CP000513.1336008.1337539_Dichelobacter_nodosus_VCS1703A', [95] 96 'AJ717394.1.1486_Suttonella_ornithocola', [96] 97 'ACKY01000036.4276.5797_Cardiobacterium_hominis_ATCC_15826', [97] 98 'EU124668.1.1486_Thioalkalibacter_halophilus', [98] 99 'JN175334.1.1533_Halothiobacillus_neapolitanus', [99] 100 'AF170419.1.1494_Halothiobacillus_kellyi', [100] 101 'AY928394.1.1518_Francisella_philomiragia', [101] 102 'AY102612.1.1544_Caedibacter_taeniospiralis', [102] 103 'U36941.1.1534_Piscirickettsia_salmonis', [103] 104 'Z32637.1.1418_Fluoribacter_dumoffii', [104] 105 'Z49738.1.1472_Legionella_wadsworthii', [105] 106 'AF227161.1.1474_Tatlockia_maceachernii', [106] 107 'X72776.1.1468_Methylomonas_aurantiaca', [107] 108 'AF304196.1.1499_Methylomonas_methanica', [108] 109 'X72773.1.1470_Methylobacter_whittenburyi', [109] 110 'X72767.1.1469_Methylomicrobium_agile', [110] 111 'U67929.1.1451_Methylosphaera_hansonii', [111] 112 'DQ298025.1.1499_Rheinheimera_chironomi', [112] 113 'X95460.1.1491_Methylophaga_thalassica', [113] 114 'U89300.1.1491_Methylocaldum_szegediense', [114] 115 'X72771.1.1473_Methylococcus_capsulatus'; TREE RAxML = ((((((((((((((1:0.009095428,2:0.00000055665583)73:0.0010798216,3:0.0055786734)95:0.02099281,4:0.027916037)89:0.018219309,(5:0.042169712,6:0.031119477)98:0.018693686)97:0.0215016,7:0.05979573)67:0.009504643,(8:0.005653142,9:0.014192587)99:0.044833366)0:0.0056204945,10:0.038294226)99:0.03595249,(((11:0.00000055665583,12:0.00000055665583)94:0.018929308,13:0.053090684)54:0.012650064,14:0.036299564)77:0.013813369)100:0.052511312,15:0.07305657)73:0.016258106,((((((((16:0.018111303,17:0.048717294)100:0.021036118,18:0.009713673)70:0.0036190448,19:0.018665748)100:0.029422157,20:0.027056394)98:0.026924279,(21:0.037403565,22:0.09193987)73:0.028045155)80:0.013511734,(((23:0.0064797453,24:0.014729728)98:0.015184703,25:0.012110149)22:0.0022414243,26:0.012878007)100:0.026956465)96:0.013406007,(27:0.045825258,28:0.06250954)83:0.005758168)98:0.01578397,(29:0.10487173,30:0.04313649)92:0.025533732)83:0.009575838)99:0.03447309,((31:0.22230698,32:0.3120144)100:0.121557966,33:0.07401677)100:0.082102835)83:0.00994431,(((((((34:0.022839155,35:0.004888138)97:0.014851593,(36:0.055916056,37:0.017016372)100:0.085425474)81:0.016105687,(38:0.05304034,39:0.095306635)99:0.04683166)40:0.008818101,40:0.06926346)100:0.044367,41:0.054347314)98:0.03352278,(42:0.04159432,43:0.036861923)100:0.13509771)33:0.009919335,(((44:0.031776715,45:0.051488373)100:0.043494083,46:0.036113035)99:0.031191591,(47:0.032990567,48:0.111120455)96:0.022385895)97:0.026175113)95:0.0185067)92:0.0123649305,((49:0.08255936,50:0.07824019)91:0.017049279,51:0.102293074)98:0.03163593)58:0.012078853,(((((((((((((52:0.053457726,53:0.035843372)96:0.02282577,54:0.06111996)99:0.02592008,((55:0.06236093,56:0.028293142)62:0.014163204,57:0.05948238)87:0.010847093)91:0.015712745,(58:0.05998129,59:0.030453516)98:0.024805898)96:0.025960935,60:0.05150175)56:0.017155422,(61:0.053666566,62:0.014286156):0.02766316)95:0.009363338,(63:0.010816288,64:0.033442453)94:0.011261819)86:0.010400188,65:0.023652826)41:0.03562443,(66:0.03368563,67:0.059149344)99:0.0361242)99:0.03984532,68:0.13410267)99:0.029642742,(69:0.067664795,70:0.052678257)99:0.037173517)95:0.023538822,(71:0.18306372,72:0.05154346)94:0.026754092)71:0.018520804,(((((((73:0.13064873,74:0.10810323)94:0.032397885,75:0.25274932)98:0.04370055,76:0.08760646)30:0.017308539,((77:0.012608733,78:0.094353974)99:0.042415466,(79:0.029589312,80:0.0023402483)61:0.01093035)100:0.17610449)98:0.036308262,((81:0.016533192,82:0.050153542)100:0.03987668,83:0.063997105)91:0.010795904)59:0.009199878,84:0.10320437)98:0.019465957,85:0.04362148)99:0.02630204)94:0.022458935,((((((((((86:0.052228265,87:0.022748722)90:0.009537352,(88:0.07321315,89:0.01660745)99:0.032644965)89:0.00813858,90:0.009422624)46:0.013648717,91:0.0682297)94:0.013455022,92:0.049122643)98:0.05458023,93:0.11065205)100:0.118398614,94:0.17861937)99:0.067076944,(((95:0.12419849,96:0.057579614)91:0.035353918,97:0.06139925)100:0.12249662,((98:0.09529935,99:0.097787276)41:0.027353646,100:0.062042248)100:0.077243745)71:0.016776852)79:0.019425051,(((101:0.13113745,102:0.2464144)100:0.15038514,103:0.17308925)95:0.047220156,((104:0.013702786,105:0.030367212)94:0.02370713,106:0.08349441)100:0.14276226)80:0.041659027)88:0.031174395,(((((107:0.065095805,108:0.027541662)98:0.029147225,(109:0.027160425,110:0.025805531)99:0.03257977)100:0.054672427,111:0.06342278)96:0.03524187,(112:0.27468595,113:0.13303815)94:0.051926088)96:0.039781995,(114:0.121251486,115:0.08246524)81:0.024936281)91:0.029872324)99:0.041152447)97; TREE 'MrBayes_maj_rule_cons' = (((((((((36:0.04564086,37:0.01323163)1.000:0.0689931,(39:0.07434235,38:0.04901755)1.000:0.03877188)0.526:0.01144172,(35:0.004356114,34:0.01937949)1.000:0.01423205)0.911:0.01429433,40:0.05532119)1.000:0.03701836,41:0.04469576)1.000:0.03349773,((47:0.02840664,48:0.09059325)0.993:0.01501725,(46:0.02621057,(45:0.04171037,44:0.02544918)1.000:0.0421695)1.000:0.02903128)1.000:0.02120987)0.998:0.02048175,(((32:0.2708123,31:0.1907234)1.000:0.1045369,33:0.06378082)1.000:0.06914919,(((((13:0.04616102,(11:0.001776608,12:0.001744785)1.000:0.01700207)0.705:0.0105652,14:0.03057523)0.864:0.01068456,(((5:0.03461393,6:0.0275836)0.999:0.01635406,((3:0.005467884,(2:0.000644162,1:0.008185223)0.618:0.001493619)1.000:0.01896407,4:0.02269256)0.990:0.01485159)0.986:0.01834516,7:0.04733967,10:0.03231107,(9:0.01257731,8:0.006646401)1.000:0.03651182)1.000:0.03352347)1.000:0.04731789,15:0.06136322)0.811:0.01223809,(((((19:0.01590993,((16:0.01539185,17:0.0403798)1.000:0.01774648,18:0.009111436)0.619:0.003222554)1.000:0.02623669,20:0.02211527)1.000:0.02742031,(((23:0.006737295,24:0.01138981)1.000:0.01311016,26:0.0111857)0.795:0.005286006,25:0.007968398)1.000:0.01856827)0.981:0.01536392,(27:0.03933188,28:0.05044479)0.811:0.004805306)0.965:0.01192122,((21:0.03291058,22:0.07622731)0.995:0.02651027,(30:0.03485116,29:0.0855498)0.995:0.01959415)0.867:0.007550964)0.837:0.01077069)0.991:0.02110735)0.915:0.01171763)0.897:0.01037791,((50:0.06818286,49:0.06808588)0.945:0.01295747,51:0.08693292)1.000:0.02856185,((((((75:0.2064588,(74:0.0919402,73:0.1113278)1.000:0.03286229)1.000:0.03275299,(76:0.06963738,((77:0.01052623,78:0.07642037)1.000:0.03571695,(80:0.002792398,79:0.02431039)0.964:0.01058896)1.000:0.1374675)0.924:0.02209022)0.998:0.02848157,84:0.08218283)0.523:0.01374811,((81:0.01432526,82:0.04186847)1.000:0.03372089,83:0.05215177)0.999:0.0106847)1.000:0.01988871,85:0.03518359)1.000:0.02373673,((71:0.1544254,72:0.04183362)0.975:0.01816286,((69:0.05262931,70:0.04421339)1.000:0.03187653,(68:0.1135792,((66:0.0251115,67:0.04969895)1.000:0.03316213,(65:0.01863649,((63:0.009105931,64:0.02783005)1.000:0.01017101,(((((57:0.05123649,56:0.02615409)0.943:0.01220539,(((53:0.02721809,52:0.04642191)1.000:0.02174656,54:0.04666485)1.000:0.02301855,(58:0.04938061,59:0.02606709)1.000:0.02423974)0.699:0.01198985)0.645:0.009608117,55:0.0508965)1.000:0.0201495,60:0.04152723)0.996:0.01533092,(62:0.01212358,61:0.04493489):0.02385683)1.000:0.007383209)0.972:0.01039812)0.997:0.03005187)1.000:0.03697858)1.000:0.0219878)0.993:0.02348238)1.000:0.01571734)1.000:0.0184615)1.000:0.029904474,(((((((((88:0.06086118,89:0.01392574)0.992:0.02675546,(87:0.02463457,(90:0.005784214,91:0.06523169)0.898:0.009674904)0.735:0.003127227)0.885:0.01106371,86:0.04329589)0.988:0.01106293,92:0.04229642)1.000:0.04898757,93:0.087274)1.000:0.1106908,94:0.1381149)1.000:0.05775567,((97:0.0478622,(96:0.04926981,95:0.1053894)1.000:0.03141923)1.000:0.1041271,(100:0.04983525,(98:0.07730727,99:0.08199724)0.966:0.02416033)1.000:0.0706821)0.685:0.01475335)0.980:0.02131177,((106:0.07029701,(104:0.01120486,105:0.02620637)0.998:0.02244515)1.000:0.1250653,((102:0.2159448,101:0.1092319)1.000:0.1394179,103:0.1454416)1.000:0.04168376)0.983:0.03394569)0.966:0.02793878,(((42:0.0241943,43:0.04021499)1.000:0.09179888,114:0.08331765)0.917:0.02767536,(((((108:0.02221147,107:0.05604826)1.000:0.02344897,(109:0.02241676,110:0.02259643)1.000:0.02852899)1.000:0.04485365,111:0.05136916)0.998:0.02633211,(112:0.2302981,113:0.1076711)1.000:0.05954281)1.000:0.03860001,115:0.06595882)0.983:0.02509828)0.875:0.01558584)0.986:0.011529435); END; BEGIN ASSUMPTIONS; TYPESET * UNTITLED = unord: 1 - 1734; END; BEGIN NOTES; TAXABITS NAME = newlyAddedTaxon on = 1 - 115; END; BEGIN CODONS; CODESET * UNTITLED = universal: 1 - 1734; END; BEGIN MESQUITECHARMODELS; ProbModelSet * UNTITLED = 'Jukes-Cantor': 1 - 1734; END; Begin MESQUITE; MESQUITESCRIPTVERSION 2; TITLE AUTO; tell ProjectCoordinator; timeSaved 1472213015071; getEmployee #mesquite.minimal.ManageTaxa.ManageTaxa; tell It; setID 0 1018521616470305633; endTell; getEmployee #mesquite.charMatrices.ManageCharacters.ManageCharacters; tell It; setID 0 4303011937737028976; mqVersion 310; checksumv 0 3 3547441393 null getNumChars 1734 numChars 1734 getNumTaxa 115 numTaxa 115 short true bits 3458764513820540943 states 15 sumSquaresStatesOnly 3158906.0 sumSquares -2.2089976028267188E23 longCompressibleToShort false usingShortMatrix true NumFiles 1 NumMatrices 1; mqVersion; endTell; getWindow; tell It; suppress; setResourcesState false false 100; setPopoutState 300; setExplanationSize 0; setAnnotationSize 0; setFontIncAnnot 0; setFontIncExp 0; setSize 1918 942; setLocation 0 24; setFont SanSerif; setFontSize 10; getToolPalette; tell It; endTell; desuppress; endTell; getEmployee #mesquite.minimal.ManageTaxa.ManageTaxa; tell It; showTaxa #1018521616470305633 #mesquite.lists.TaxonList.TaxonList; tell It; setTaxa #1018521616470305633; getWindow; tell It; newAssistant #mesquite.lists.TaxonListCurrPartition.TaxonListCurrPartition; setExplanationSize 30; setAnnotationSize 20; setFontIncAnnot 0; setFontIncExp 0; setSize 1818 870; setLocation 0 24; setFont SanSerif; setFontSize 10; getToolPalette; tell It; setTool mesquite.lists.TaxonList.TaxonListWindow.ibeam; endTell; endTell; showWindow; getEmployee #mesquite.lists.ColorTaxon.ColorTaxon; tell It; setColor Red; removeColor off; endTell; getEmployee #mesquite.lists.TaxonListAnnotPanel.TaxonListAnnotPanel; tell It; togglePanel off; endTell; endTell; endTell; getEmployee #mesquite.trees.BasicTreeWindowCoord.BasicTreeWindowCoord; tell It; makeTreeWindow #1018521616470305633 #mesquite.trees.BasicTreeWindowMaker.BasicTreeWindowMaker; tell It; suppressEPCResponse; setTreeSource #mesquite.trees.StoredTrees.StoredTrees; tell It; setTreeBlock 1; setTreeBlockID 0156c6a9dadd13; toggleUseWeights off; endTell; setAssignedID 1998.1472211849690.6634815356118772881; getTreeWindow; tell It; setExplanationSize 30; setAnnotationSize 20; setFontIncAnnot 0; setFontIncExp 0; setSize 1818 870; setLocation 0 24; setFont SanSerif; setFontSize 10; getToolPalette; tell It; endTell; setActive; getTreeDrawCoordinator #mesquite.trees.BasicTreeDrawCoordinator.BasicTreeDrawCoordinator; tell It; suppress; setTreeDrawer #mesquite.trees.SquareLineTree.SquareLineTree; tell It; setNodeLocs #mesquite.trees.NodeLocsStandard.NodeLocsStandard; tell It; branchLengthsToggle on; toggleScale on; toggleBroadScale off; toggleCenter on; toggleEven on; setFixedTaxonDistance 0; endTell; setEdgeWidth 4; showEdgeLines on; orientUp; endTell; setBackground White; setBranchColor Black; showNodeNumbers off; showBranchColors on; labelBranchLengths off; centerBrLenLabels on; showBrLensUnspecified on; showBrLenLabelsOnTerminals on; setBrLenLabelColor 0 0 255; setNumBrLenDecimals 6; desuppress; getEmployee #mesquite.trees.BasicDrawTaxonNames.BasicDrawTaxonNames; tell It; setColor Black; toggleColorPartition off; toggleColorAssigned on; toggleShadePartition off; toggleShowFootnotes on; toggleNodeLabels on; toggleCenterNodeNames off; toggleShowNames on; namesAngle ?; endTell; endTell; setTreeNumber 1; setDrawingSizeMode 0; toggleLegendFloat on; scale 0; toggleTextOnTree off; togglePrintName on; showWindow; endTell; desuppressEPCResponse; getEmployee #mesquite.trees.ColorBranches.ColorBranches; tell It; setColor Red; removeColor off; endTell; getEmployee #mesquite.ornamental.BranchNotes.BranchNotes; tell It; setAlwaysOn off; endTell; getEmployee #mesquite.ornamental.ColorTreeByPartition.ColorTreeByPartition; tell It; colorByPartition off; endTell; getEmployee #mesquite.ornamental.DrawTreeAssocDoubles.DrawTreeAssocDoubles; tell It; setOn on; setDigits 4; writeAsPercentage off; toggleCentred off; toggleHorizontal on; toggleWhiteEdges on; toggleShowOnTerminals on; setFontSize 10; setOffset 0 0; endTell; getEmployee #mesquite.ornamental.DrawTreeAssocStrings.DrawTreeAssocStrings; tell It; setOn on; toggleCentred on; toggleHorizontal on; setFontSize 10; setOffset 0 0; toggleShowOnTerminals on; endTell; getEmployee #mesquite.trees.TreeInfoValues.TreeInfoValues; tell It; panelOpen false; endTell; endTell; endTell; getEmployee #mesquite.charMatrices.BasicDataWindowCoord.BasicDataWindowCoord; tell It; showDataWindow #4303011937737028976 #mesquite.charMatrices.BasicDataWindowMaker.BasicDataWindowMaker; tell It; getWindow; tell It; setExplanationSize 30; setAnnotationSize 20; setFontIncAnnot 0; setFontIncExp 0; setSize 1818 870; setLocation 0 24; setFont SanSerif; setFontSize 10; getToolPalette; tell It; endTell; setTool mesquite.charMatrices.BasicDataWindowMaker.BasicDataWindow.arrow; colorCells #mesquite.charMatrices.ColorByState.ColorByState; tell It; setStateLimit 9; toggleUniformMaximum on; endTell; colorRowNames #mesquite.charMatrices.TaxonGroupColor.TaxonGroupColor; colorColumnNames #mesquite.charMatrices.CharGroupColor.CharGroupColor; colorText #mesquite.charMatrices.NoColor.NoColor; setBackground White; toggleShowNames on; toggleShowTaxonNames on; toggleTight off; toggleThinRows off; toggleShowChanges off; toggleSeparateLines off; toggleShowStates on; toggleAutoWCharNames off; toggleAutoTaxonNames off; toggleShowDefaultCharNames off; toggleConstrainCW on; toggleBirdsEye on; toggleShowPaleGrid off; toggleShowPaleCellColors off; toggleShowPaleExcluded off; togglePaleInapplicable on; toggleShowBoldCellText off; toggleAllowAutosize off; toggleColorsPanel off; toggleLinkedScrolling on; toggleScrollLinkedTables off; endTell; hideWindow; getEmployee #mesquite.charMatrices.AlterData.AlterData; tell It; toggleBySubmenus off; endTell; getEmployee #mesquite.charMatrices.ColorCells.ColorCells; tell It; setColor Red; removeColor off; endTell; getEmployee #mesquite.categ.StateNamesStrip.StateNamesStrip; tell It; showStrip off; endTell; getEmployee #mesquite.charMatrices.AnnotPanel.AnnotPanel; tell It; togglePanel off; endTell; getEmployee #mesquite.charMatrices.CharReferenceStrip.CharReferenceStrip; tell It; showStrip off; endTell; getEmployee #mesquite.charMatrices.QuickKeySelector.QuickKeySelector; tell It; autotabOff; endTell; getEmployee #mesquite.charMatrices.SelSummaryStrip.SelSummaryStrip; tell It; showStrip off; endTell; getEmployee #mesquite.align.AlignToDropped.AlignToDropped; tell It; gapCosts 8 3 2 2; subCosts 10 5 10 10 10 5 5 10 10 10 5 10; endTell; getEmployee #mesquite.molec.ColorByAA.ColorByAA; tell It; emphasizeDegeneracy off; endTell; getEmployee #mesquite.molec.SequenceInfoEditor.SequenceInfoEditor; tell It; panelOpen false; endTell; endTell; endTell; endTell; end;