#NEXUS [written Thu Jan 12 08:11:41 CST 2017 by Mesquite version 3.10 (build 765) at Hulab/192.168.1.100] BEGIN TAXA; DIMENSIONS NTAX=45; TAXLABELS Paracoccidioides_brasiliensis_PbDGAT1 Olea_europaea_OeDGAT1 Phaeodactylum_tricornutum_PtDGAT1 Perilla_frutescens_PfDGAT1 Nicotiana_tabacum_NtDGAT1 Mus_musculus_MmDGAT1 Medicago_truncatula_MtDGAT1 Nannochloropsis_oceanica_NoDGAT1B Nannochloropsis_oceanica_NoDGAT1A Physcomitrella_patens_PpDGAT1 Vernonia_galamensis_VgDGAT1 Vernicia_fordii_VfDGAT1 Zea_mays_ZmDGAT1 Vitis_vinifera_VvDGAT1 Tropaeolum_majus_TmDGAT1 Sus_scrofa_SsDGAT1 Ricinus_communis_RcDGAT1 Toxoplasma_gondii_TgDGAT1 Thalassiosira_pseudonana_TpDGAT1 Lotus_japonicas_LjDGAT1 Chlorella_vulgaris_CvDGAT1 Chlorella_ellipsoidea_CeDGAT1 Euonymus_alatus_EaDGAT1 Echium_pitardii_EpDGAT1 Brassica_napus_BnDGAT1 Auxenochlorella_protothecoides_ApDGAT1 Arabidopsis_thaliana_AtDGAT1 Brachypodium_distachyon_BdDGAT1 Bos_Taurus_BtDGAT1 Homo_sapiens_HsDGAT1 Klebsormidium_flaccidum_KfDGAT1 Jatropha_curcas_JcDGAT1 Helianthus_annuus_HaDGAT1 Glycine_max_GmDGAT1a Arabidopsis_thaliana_AtDGAT2 Jatropha_curcas_JcDGAT2 Vernicia_fordii_VfDGAT2 Nannochloropsis_oceanica_NoDGAT2B Phaeodactylum_tricornutum_PtDGAT2 Ricinus_communis_RcDGAT2 Nannochloropsis_oceanica_NoDGAT2A Chlamydomonas_reinhardtii_CrDGAT2 Klebsormidium_flaccidum_KfDGAT3 Vernicia_fordii_VfDGAT3 Arachis_hypogaea_AhDGAT3 ; END; BEGIN CHARACTERS; DIMENSIONS NCHAR=1160; FORMAT DATATYPE = Protein GAP = - MISSING = ?; MATRIX Paracoccidioides_brasiliensis_PbDGAT1 ----------------------------------------------------------------------------------------------------------------------------------------MASIARIAVSRT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------HNMAKDHHPTASQPLQAKEHLQDGALQ---PAQSNSNSPKT--------------------------KSKYRHVAAYHSRLTISCLSRESEVNPS--FFGFRNLMVLVLIVMNLRLIVENF-------MKYGV--------------LI-------------CIRCHDYRQQ-----------------DVVLGAI-----LSALIPCHLFVAFIIERA--AAHQVRGAIGRIKREESTQEDAP-----EQQSFRSAWICTAIAHSLNASLCLLVTSYAV---YYYVNHP-GIGTLCEVHV-ILV--WL-KICSYAFTNRDLR-----HAVLHPS---------STSPLPEIY----------------QSCPYPRNVTIGNLTYFWL-----APTLVYQPVY--PRTDRIRWSFVAKR--------VMEMIGLSVFIWLTSAQYAA-PVLRNSLE-------KI--ATLDLTSIIERV----MKLSTISLIIWLAGF-FALFQSYLNALAEVM---RFGDREFYT-----EWWNSPSVGTYWRTWNKPVYHFMRRHI-FSPLIGRG---------------------------WSPFAASVMVF--TFSGILHELLVGIP----------THN-VIGVAFAGMVLQLPLIAATLPLEKMNT----RTG-KIIGNCVFWV-SFCL-------VGQPLAALLYFFA--WQAKYGSGGELLCLSLLVAITFLLDILILLLSIPMKLGANRCETAMTVLCSMLEKDAPRTATSGAGASIKKMRSRRLVRSGLYLLDILNFLSTSEGCSSANKYQLIVTGETINLKISTLQ Olea_europaea_OeDGAT1 -------------------------------------------------------------------------------------------------------MTIPELPESLETTTLNSHHSRAA----------STVRRRSIDVAV------------------------------------------------------------------------------------------------------------------------------------------------------------LESDSNSLEAVNDSDSDVNNTNEMGNLRGGVVESALEEPSELGTEGLRNGKEENEHVRTGESNQEMEVLA------------------------SAKFAHRPSAPVHRRIKESPLSSDAIFKQS--HAGLFNLCIVVLVAVNSRLIIENL-------MKYGW--------------LI-------NSGFWF--SSTSLKDW-----------------PLLMCCL-----SLPIFP---LAAFFVEKL------------------------------VLLKYISECVAV-FLHILITTAAILYPVLVI---LRCDSAV-LSGVTLMLFA-CIV--WL-KLVSYAHASHDMR-----ALAKSLD---------KGETLSGYW----------------NS-DDSYGASFQSLAYFMV-----APTLCYQPSY--PRTSCIRKGWVVRQ--------LIKLIIFTGFMGFIVEQYIN-PIVRNSQH-------PL--KG-NLLYAIERV----LKLSVPNLYVWLCMF-YCFFHLWLNILAELL---CFGDREFYK-----DWWNAKTVEEYWRMWNMPVHKWMVRHI-YFPCLRNG---------------------------MPRGGAILIAF--LISAIFHELCIAVP----------CHI-FKFWAFIGIMFQVPLVILTNYLQDKFQ------N-SMVGNMIFWC-FFSI-------LGQPMCLLLYYHD--LMNRKASAK--------------------------------------------------------------------------------------------------------------- Phaeodactylum_tricornutum_PtDGAT1 ----------------------------------------------------------------------------------------------------MDETEITPLLRFSTPSRAEHSSWIKLASESCAYSETDEFLADEAARAT----------------------------------Q-----------------------------------------------------------------------------------------------------------------------RALQHQEALQMAQAMPGAKPGTLPPLYFAPTIKRSRSFAKLQEHHGDGMPRVNMRRTK---SRDFNADKLDA------------------------RSTKGYPPSKPMHRAAEPSYLSADA-PIQN--YRGFLNLGVIILIVSNFRLILGTI-------RSNGF--------------VLTTAVKHYKNLNHL--KEDPWQEF-----------------PFVSGFL-----LQLVFV---SIAFGIEWM------------------------------LCRKYFNENFGM-ILHHFNAHSALLIPLGIV---WNLIDRP-AVGAILLLHA-TIT--WM-KLISYMLANEDYR-----LSSRRVG----------GNPHLATLALVENLDSDEA-----NI-NYPQNVTLRNIFYFWC-----APTLTYQIAF--PKSPRVRY-WKIADI-------LMRMTVSIALFTFLLAQIVQ-PALEELVS-------DL--DETNGSYTAAIFAEYWLKLSIANTYLWLLMF-YTYFHLYLNLFAELL---RFGDRVFYK-----DWWNSSEVSAYWRLWNMPVHYWLIRHV-YFPCVRLK---------------------------MPKVAATFVVF--FLSAVMHEVLVSVP----------FHI-IRPWSFIGMMMQIPLVAFTKYLYRKFP------G-GSIGNVLFWM-TFCV-------IGQPMAILLYYHD--IMNRKGN----------------------------------------------------------------------------------------------------------------- Perilla_frutescens_PfDGAT1 -------------------------------------------------------------------------------------------------------MAILDSPEILDTTSSSADNGAAHH---------TTLRRRQSARSV----------------------------------P-----------------------------------------------------------------------------------------------------------------------PLLDSDSNSLEAESAINDSENVRNDANLIENLRGGAVESENEKQESYGKEEGAKVKEN---GETSNGNGTDV-----------------------MAVKFTFRPAAPAHRKNKESPLSSDAIFKQS--HAGLFNLCIVVLVAVNSRLIIENL-------MKYGW--------------LI-------KSGFWF--SSTSLRDW-----------------PLLMCCL-----SLPVFA---LASFLVEKL------------------------------VKLNYIPEWVAV-FLHVTITTVEILFPVVVI---LRCDSAV-LSGVTLMLFA-CTV--WL-KLVSYAHTNYDLR-----VLAKSLD---------KWEAMSRYW----------------NL-DYAYDVSFKSLAYFMV-----APTLCYQPSY--PRTACIRKGWVVRQ--------LIKLVIFTGLMGFIIEQYIN-PIVQNSQH-------PL--KG-NLLYAIERV----LKLSVPNLYVWLCMF-YCFFHLWLNILAELL---CFGDREFYK-----DWWNARTVEEYWRMWNMPVHKWMVRHI-YCPCLQNG---------------------------IPKIVAVLIAF--LVSAIFHELCVAVP----------CQI-FKFWAFSGIMLQVPLVIVTNYLQEKFK------N-SMVGNMMFWC-FFCI-------FGQPMCVLLYYHD--LMNRKASAR--------------------------------------------------------------------------------------------------------------- Nicotiana_tabacum_NtDGAT1 ----------------------------------------------------------------------------------------------------MVIMELPESVEMTTTTTTSGIENLNSDLN-------HSVRRRRGSNGF---------------------------------------------------------------------------------------------------------------------------------------------------------------EAASAINSSDANMSEDRRDVCGSGAGLETVNERSKSVGESSDVIRKEDDRNDN---VANGEESKSTE--------------------TTTTPFKFAYRASAPAHRRIKESPLSSDAIFKQS--HAGLFNLCVVVLIAVNSRLIIENL-------MKYGL--------------LI-------RAGFWF--SSKSLRDW-----------------PLLMCCL-----SLQILP---LAAFLVEKL------------------------------AQQRHLTERAVV-TLHITITTAAILYPVLVI---LGCDSAF-LFGVILMLVA-CIV--WM-KLVSYAHTNHDMR-----QLAKSTD---------KDETSDG---------------------DFSYDVSFKSLAYFMV-----APTLCYQLSY--PHTPCIRKGWVARQ--------FIKLVIFTGLMGFIIEQYIN-PIVQNSQH-------PL--KG-NLLYAIERV----LKLSVPNLYVWLCMF-YCFFHLWLNILAELL---CFGDREFYK-----DWWNAKTIDEYWRMWNMPVHKWMVRHI-YFPCLRNG---------------------------IPKGVAILIAF--LVSAVFHELCIAVP----------CRL-FKWWAFMGIMFQVPLVILTNFLQNKFQ------S-SMVGNMMFWC-FFCI-------LGQPMCVLLYYHD--VMNRKSSAR--------------------------------------------------------------------------------------------------------------- Mus_musculus_MmDGAT1 ---------------------------------------------------------------------------------------------------------------------------------MGDRGGAGSSRRRRTGSRV-------------------------------SVQG-----------------------------------------------------------------------------------------------------------------------GSGPKVEEDE------------------------VRDAAVSPDLGAGGDAPAPAPAPA---HTRDKDGRTSV-----------------------GDGYWDLRC-----HRLQDSLFSSDSGF-SN--YRGILNWCVVMLILSNARLFLENL-------IKYGI--------------LV-------DPIQVVSLFLKDPYSW-----------------PAPCVII-----ASNIFV---VAAFQIEKR------------------------------LAVGALTEQMGL-LLHVVNLATIICFPAAVA---LLVESIT-PVGSVFALASYSIM--FL-KLYSYRDVNLWCRQRR--VKAKAVS---------TGKKVSGAAAQQ-------------AV-SYPDNLTYRDLYYFIF-----APTLCYELNF--PRSPRIRKRFLLRR--------VLEMLFFTQLQVGLIQQWMV-PTIQNSMK-------PF--KDMDYSRIIERL----LKLAVPNHLIWLIFF-YWFFHSCLNAVAELL---QFGDREFYR-----DWWNAESVTYFWQNWNIPVHKWCIRHF-YKPMLRHG---------------------------SSKWVARTGVF--LTSAFFHEYLVSVP----------LRM-FRLWAFTAMMAQVPLA----WIVGRFF------Q-GNYGNAAVWV-TLII--------GQPVAVLMYVHDYYVLNYDAPVGV-------------------------------------------------------------------------------------------------------------- Medicago_truncatula_MtDGAT1 -------------------------------------------------------------------------------------------------------MAISDTPETTATATATVTTIETDTDLKR-----SSLRRRPSATST---------------------------------AG-----------------------------------------------------------------------------------------------------------------------GLFDAESAAADAVRDSGSDDSLNGKINNEEEVKDRKTDHAEGIVDDDDDNAVKKNGGN---DVINDRENVAV------------------------DFKFTYRPSVPAHRRSKESPLSSGNIFRQS--HAGLFNLCIVVLVAVNSRLIIENL-------MKYGW--------------LI-------RSGFWF--SSKSLRDW-----------------PLFMCCL-----SLAIFP---LAAFVVEKL------------------------------AQQKRISEPVIV-LLHIVITTVISYGSMALL---CRCDSAF-LSGSTLMLLT-CIV--WL-KLVSYAHTTYDMR-----ALAVSNE---------KGETMPDTF----------------NMEEYPHNVSFQSLAYFMV-----APTLCYQPSY--PRTPSVRKGWVCRQ--------LLKLVIFTGVMGFIIEQYMN-PIVQNSQH-------PL--KG-NLLYAIERV----LKLSVPNVYVWLCMF-YCFFHLWLNILAELL---RFGDREFYK-----DWWNAQTVEEYWRMWNMPVHKWMVRHV-YFPCIRFG---------------------------IPKGAAALTAF--LVSAVFHELCIAVP----------CRM-FKLWAFIGIMFQVPLVLITNYLKNKYR------N-SMVGNMIFWF-IFCI-------LGQPMCVLLYYHD--LMNRKGEID--------------------------------------------------------------------------------------------------------------- Nannochloropsis_oceanica_NoDGAT1B -----------------------------------------MPLTPAPSQRDALILFPSFCSSLPYACLLRSPPTRTTCVTSEHASQVVRVGGGDRREPSYSRNEQNDGGENTIPASIQGKYNDGALALTSSSSSSSSPPSTPPSTALMSRLFEFKIANKGGNPLSKFASAFIPRKRQASITDRGFKLFTSKKKKMGRTSDRHFAANEADISMKVVSVRRFSRSESVAHVIIQPLDGKEALVMSTKNVEDAREFVSEFAALKAMAPKSQSSTPEATPPPSPQVTSSIPSNLETLPILSTLNMGLVVKNAAATALAPQSSLPASISEVPRGSLALVESECVADSIITTTTTNETIPASSKA---LGSLSATAINSVTTTTTVSPLVVPAEPSTAVATTLSPTVLHPLLVPLHTEIRQSPVLSLDHGWGI--YILLFKLMVLQTALACWGLITSPLPVSDHLGQLWFWTSELLHSLLAAPFGLLQSVSDGLRFIFSTPIGAFPWREWKSAIVDAGTGDALGRRVPLAVIILHILTRILMVYG---LHCLAISHV-------GRSLERFFSARHLFKGKG-----FALNFLTEGKLV-LLGQLDLVLCGVWDSWML---LIAHRGMGLVTLGLTMWS-IFI--LL-KLWSFSTTADAHR--------RHKG-------------------------------------ETLEAITFSSYIYFLF-----APTFIYQTSY--PRTRSIDWEHVRSL--------VLQLVGVGLIVKVLAVEWMF-PVLEAHVG-------HV--TAHKYHLVLLGA----LRLAFPCAVAWLLSVGYGVFHLYTNLIAELT---RFGDRTFYR-----EWWNVNTLRDYWRLWNAPMSFFFKRHV-LFPLYRLGEQGEIFLREHFCVRSASLSMRKNGPSDCVKMGSFTIIF--LLSAFLHEIVMVVPFNTIQAYRGVCNL-FGPWAFYGIAGQIGAILATDRLAKA--------E-PYLGNAVFWT-MFCI-------VGQPMAVLLYYHD--ITSFTS------------------------------------------------------------------------------------------------------------------ Nannochloropsis_oceanica_NoDGAT1A -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MSMHKLTRPSVLSIE-YPSRD--YTGYLNLAMIILGVHFSHAVVDC--------VSLVW-----------------------RYGVQL--PKHSLVEV-----------------PCLMCAL-----SLTINI---FLAWFTEYL------------------------------ASRRFFPSSMAVGVLHSLNCLWTLLCPCHVA---WSRPDVP-LHTFLLLFWS-VIA--FL-KLVSWSHTNWDLRHA---FFSRRAR---------KSQAHLPAAALHEDGYNNAKPLESGAT-RYPHSVSLSNISFFFF-----CPTLCYQPDY--PRAPTIRLRTLASL--------TFRIIVMTAFAGFIIDQQIH-PIIQNTMS-------HV--DSLDLLKALGEL----LRLAIPSTFVWLIFF-YVYFHCTLNLFAELT---RFGDRLFFK-----DRWNSTSFSRYWRTWNLPVHQFAVRHV-YFPLLRAG---------------------------ASKMTANVAVF--AVSAFFHELLISIP----------CHV-VRLWAFLAMMGQIPLIYLTDQLEKTLF------KETQAGNYTFWL-IFCI-------FGQPMAVLLYYAD--FSARTTSESAL------------------------------------------------------------------------------------------------------------- Physcomitrella_patens_PpDGAT1 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MPVKSSNLAGERAATSHINAN---------------------------------------TKFDLRGCTPAHRVRRESPLSSDAIFHQS--HAGLFNLCIVVLIAVNSRLIIENL-------MKYGL--------------LI-------RTGFWF--SSKSARDW-----------------PLLMCGL-----SLPTFP---FAALLVEKL------------------------------CWKNENGKWLIF-VLHLIISTVGILYPGYVI---HRVQSAL-LPGLVLILIA-VTG--WM-KLISYAHVNKDMR-----ELLRAKE---------KLPEAPQYA----------------DKIEVPDHLTIQNIAYFML-----APTLCYQLSY--PRSDTIRKSWVLRQ--------AGKLVVFLGLGGFIIEQYIN-PTVKNSQH-------PL--RG-NYLQALERV----LKLSLPVLYVWLCLF-YCLFHLWLNIVAELL---RFGDREFYK-----DWWNAQTVEEYWRMWNMPVHKWMVRHI-YFPSIRAG---------------------------LSKKAAVLLVF--AISALFHEVIIGVP----------CHM-LRCWAFLGIMMQVPLVYLTNVIKERYH------S-SMVGNMVFWF-FFCI-------VGQPMCLLLYYHD--VFNNFPST---------------------------------------------------------------------------------------------------------------- Vernonia_galamensis_VgDGAT1 -------------------------------------------------------------------------------------------------------MALLDTPQIGEITTTAT----------------TTIRRRTTVKPD-------------------------------AGIG-----------------------------------------------------------------------------------------------------------------------DGLFDSSSSSKTNSSFEDGDSLNGD-----FNDKFKEQIGAGDESKDDSKGNGQKIDH---GGVKKGRETTV-------------------------VHYAYRPSSPAHRRIKESPLSSDAIFKQS--HAGLFNLCIVVLVAVNGRLIIENL-------MKYGL--------------LI-------NSNFWF--SSRSLRDW-----------------PLLMCCL-----TPSDFP---LAAYIVEKL------------------------------AWKKRISDPVVI-TLHVIITTTAILYPVFMI---LRFDSVV-LSGVSLMLCA-CIN--WL-KLVSFVHTNYDMR-----SLLNSTD---------KGEVEPMSS----------------NM-DYFYDVNFKSLVYFMV-----APTLCYQISY--PRTAFIRKGWVLRQ--------LIKLVIFTGFMGFIIEQYIN-PIVKNSRH-------PL--KG-DFLYAIERV----LKLSVPNLYVWLCMF-YCFFHLWLNILAELL---CFGDREFYK-----DWWNAQTIEEYWRLWNMPVHKWIVRHL-YFPCLRNG---------------------------IPKGAAILVAF--FMSAVFHELCIAVP----------CHI-FKFWAFIGIMFQVPLVLLTNYLQHKFQ------N-SMVGNMIFWC-FFSI-------FGQPMCVLLYYHD--VMNQKGKSK--------------------------------------------------------------------------------------------------------------- Vernicia_fordii_VfDGAT1 -------------------------------------------------------------------------------------------------------MTIPETPDNSTDATTSGGA-------ESSSDLNLSLRRRRTASNS----------------------------------D-----------------------------------------------------------------------------------------------------------------------GAVAELASKIDELESDAGGGQ---------VIKDPGAEMDSGTLKSNGKDCGTVKD-----RIENRENRGGS------------------------DVKFTYRPSVPAHRALKESPLSSDNIFKQS--HAGLFNLCIVVLVAVNSRLIIENI-------MKYGW--------------LI-------KTGFWF--SSRSLRDW-----------------PLLMCCL-----TLPIFS---LAAYLVEKL------------------------------ACRKYISAPTVV-FLHILFSSTAVLYPVSVI---LSCESAV-LSGVALMLFA-CIV--WL-KLVSYAHTNFDMR-----AIANSVD---------KGDALSNAS----------------SA-ESSHDVSFKSLVYFMV-----APTLCYQPSY--PRTASIRKGWVVRQ--------FVKLIIFTGFMGFIIEQYIN-PIVQNSQH-------PL--KG-DLLYAIERV----LKLSVPNLYVWLCMF-YCFFHLWLNILAELL---RFGDREFYK-----DWWNARTVEEYWRMWNMPVHKWMVRHI-YFPCLRHK---------------------------IPRGVALLITF--FVSAVFHELCIAVP----------CHI-FKLWAFIGIMFQIPLVGITNYLQNKFR------S-SMVGNMIFWF-IFCI-------LGQPMCLLLYYHD--LMNRKGTTESR------------------------------------------------------------------------------------------------------------- Zea_mays_ZmDGAT1 ---------------------------------------------------------------------------------------------------MAPPPSMPAASDRAGPGRDAGDS--------------SSLRLRRAPSAD-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGDLAGDSSGGLRENGEPQSP---TNPPPQEQQQH-------------------------EMLYYRASAPAHRRVKESPLSSDAIFRQS--HAGLLNLCIVVLIAVNSRLIIENL-------MKYGL--------------LI-------RAGFWF--SARSLGDW-----------------PLLMCCL-----TLPVFP---LVALMAEKL------------------------------ITRKLIGEHVVI-LLHIIITTSAIVYPVVVT---LKCDSAV-LSGFVLMFLA-SIM--WM-KLVSYAHTNYDIR-----VLSKSTE---------KGAAYGNYV----------------DP-ENMKDPTFKSLVYFML-----APTLCYQPTY--PQTTCIRKGWVTQQ--------LIKCVVFTGLMGFIIEQYIN-PIVKNSKH-------PL--KG-NFLNAIERV----LKLSVPTLYVWLCMF-YCFFHLWLNIVAELL---CFGDREFYK-----DWWNAKTVEEYWRMWNMPVHKWIIRHI-YFPCIRKG---------------------------FSRGVAILISF--LVSAVFHEICIAVP----------CHI-FKFWAFSGIMFQIPLVFLTRYLHATFK------H-VMVGNMIFWF-FFSI-------VGQPMCVLLYYHD--VMNRQAQASR-------------------------------------------------------------------------------------------------------------- Vitis_vinifera_VvDGAT1 -------------------------------------------------------------------------------------------------------MAICNSPVSVTTSSSSSHADSDLD---------FSIRKRFGGKGK-------------------------------AVAD-----------------------------------------------------------------------------------------------------------------------SSLETETEAAAAAV--------------------LEAEKSVGEVGSGGDRGESGSQVV-----RNGENGVAE-----------------------VAAKFAYRPCAPAHRKVKESPLSSDAIFRQS--HAGLFNLCIVVLVAVNSRLIIENL-------MKYGW--------------LI-------RAGFWF--SSKSLRDW-----------------PLFMCCL-----TLPIFP---LAAFVVEKL------------------------------AQQKYISEQVVV-SLHIIITTAAVLFPVLVI---LRCDSAV-LSGVTLMLFA-CIV--WL-KLVSFAHTNYDMR-----AVAKLID---------KGDDLSTSL----------------NM-DYPYDVNFKSLAYFMV-----APTLCYQPSY--PRSTCIRKGWVFRQ--------FVKLAIFTGVMGFIIEQYIN-PIVQNSQH-------PL--KG-NFFYALERI----LKLSVPNLYVWLCMF-YCFFHLWLNILAELL---RFGDREFYK-----DWWNAKTVEEYWRMWNMPVHKWMVRHL-YFPCLRNG---------------------------ISKGVSVVIAF--AISAIFHELCIAVP----------CHM-FKLWAFIGIMFQVPLVLVTNYLQNKFR------N-SMVGNMIFWL-FFSI-------LGQPMCVLLYYHD--LMNRKETTESSL------------------------------------------------------------------------------------------------------------ Tropaeolum_majus_TmDGAT1 -------------------------------------------------------------------------------------------------------MAVAESSQNTTTMSGHGDSDL------------NNFRRRKPSSSV---------------------------------------------------------------------------------------------------------------------------------------------------------------------IEPSSSGFTSTNGVPATGHVAENRDQDRVGAMENATGSVNLIGNGGG--VVIGNEEKQVGE-----------------------TDIRFTYRPSFPAHRRVRESPLSSDAIFKQS--HAGLFNLCIVVLIAVNSRLIIENL-------MKYGW--------------LI-------DTGFWF--SSRSLGDW-----------------SIFMCCL-----TLPIFP---LAAFIVEKL------------------------------VQRNHISELVAV-LLHVIVSTAAVLYPVIVI---LTCDSVY-MSGVVLMLFG-CIM--WL-KLVSYAHTSSDIR-----TLAKSGY---------KGDAHPNST----------------IV-SCSYDVSLKSLAYFMV-----APTLCYQPSY--PRSSCIRKGWVVRQ--------FVKLIVFIGLMGFIIEQYIN-PIVRNSKH-------PL--KG-DFLYAIERV----LKLSVPNLYVWLCMF-YSFFHLWLNILAELL---RFGDREFYK-----DWWNAKTVAEYWKMWNMPVHRWMVRHL-YFPCLRNG---------------------------IPKEGAIIIAF--LVSGAFHELCIAVP----------CHV-FKLWAFIGIMFQVPLVLITNYLQEKFS------N-SMVGNMIFWF-IFCI-------LGQPMCVLLYYHD--LINLKEK----------------------------------------------------------------------------------------------------------------- Sus_scrofa_SsDGAT1 ---------------------------------------------------------------------------------------------------------------------------------MGDRSGAGGSRRRRTGSRP-------------------------------SSQS-----------------------------------------------------------------------------------------------------------------------GSGFAA------------------------------AEEEVRDVGAGGDAPTPDKDKD-------GHDDVSS-------------------------GHWDLRC-----HRLQDSLFSSDSGF-SN--YRGILNWCVVMLVLSNARLFLENL-------IKYGI--------------LV-------DPIQVVSLFLKDPYSW-----------------PALCLVI-----VANVFA---VTAFQVEKR------------------------------LAVGALTEQAGL-LIHVANLATILCFPAAVA---FLLESIT-PVGSLLALMVYAIL--FL-KLFSYRDVNLWCRERRATAKAKAAS---------AGKKANGGAAQH-------------SV-SYPDNLTYRDLYYFLL-----APTLCYELNF--SRFPRIRKRFLLRR--------LLEMLFLIQLQVGLIQQWMV-PTIQNSMK-------PF--KDMDYSRIIERL----LKLAVPNHLIWLIFF-YWLFHSCLNAVAELM---QFGDREFYR-----DWWNSESVTYFWQNWNIPVHKWCLRHF-YKPMLRRG---------------------------SSKWVARMGVF--LASAFFHEYLVSIP----------LRM-FRLWAFTGMMAQIPLA----WIVGRFF------R-GNYGNAAVWL-SLII--------GQPVAVLMYVHDYYVLHHEAPTAGA------------------------------------------------------------------------------------------------------------- Ricinus_communis_RcDGAT1 -------------------------------------------------------------------------------------------------------MTILETPETLGVISSSATSDLN-----------LSLRRRRTSNDS----------------------------------D-----------------------------------------------------------------------------------------------------------------------GALADLASKFDDDDDVRSEDSAENI-----IEDPVAAVTELATAKSNGKDCVANSNKD-----KIDSHGGSS------------------------DFKLAYRPSVPAHRSLKESPLSSDLIFKQS--HAGLFNLCIVVLVAVNSRLIIENL-------MKYGW--------------LI-------KTGFWF--SSRSLRDW-----------------PLFMCCL-----SLPVFP---LAAYLVEKA------------------------------AYRKYISPPIVI-FLHVIITSAAVLYPASVI---LSCESAF-LSGVTLMELA-CMV--WL-KLVSYAHTNYDMR-----AIADTIH---------KEDA-SNSS----------------ST-EYCHDVSFKTLAYFMV-----APTLCYQPSY--PRTAFIRKGWVFRQ--------FVKLIIFTGFMGFIIEQYIN-PIVQNSQH-------PL--KG-DLLYAIERV----LKLSVPNLYVWLCLF-YCFFHLWLNIVAELL---RFGDREFYK-----DWWNAKTVEEYWRMWNMPVHKWMVRHI-YFPCLRRK---------------------------IPRGVAIVIAF--FVSAVFHELCIAVP----------CHM-FKLWAFFGIMFQIPLVVITNYFQRKFR------S-SMVGNMIFWF-FFCI-------LGQPMCVLLYYHD--LMNRDGN----------------------------------------------------------------------------------------------------------------- Toxoplasma_gondii_TgDGAT1 -------------------------------------------------------------------------------------------------------MSVVESKRKENGGSGPVTPDIGG----------TSLLKRESKVAK----------------------------------------------------------------------------------------------------------------------------------------------------------SLWLRQQDTITRLE--------------------ELQRQHEEEIRAKERRQNSYDDLRTPLRSVDGSRRPSV---------------------VNDINDYRGRPLHDQLHGAYRATLLSHHTKNLN--LRGFLNLFFILLFVINFRMATDNL-------MEYGL--------------MI-------RLPSSF---RDILSNW-----------------PMLLCFL-----LMHFCI---LGAFVIERFVA----------------------------AWVPHLLDWSEC-VLIGLNFFLVFIVPYLTV-----CNSSPSPAASALLLAF-SIV--WLFKLFSFHHVCLDAR-----RALRDGD---------NFRELCSNSEEAE------------HVRRYPYSITLRHLYTFIW-----MPTMCFQFYY--PRVPRIRWLSVIRH--------VFESAACLALMKIVVDQHIV-PVARNSFTITEMQSIPL--ST-LLVHFLDKI----TRLSIPNLYVWLLMF-VGLFHHWCNILAEVT---RFGDRQFYL-----DWWNASSFGEYWRKWNLPIHHFLNRHI-NKPLRRAR---------------------------FPRIVATSVVF--LISALLHEYMITVP----------LQLGWTGWVFLGFMAQAPLTYITNLSFFQRN--------PTVGNCFFWF-IFCF-------SGQPLGILIYWYL--WGVKHGTVQQLDPSKIQIM----------------------------------------------------------------------------------------------------- Thalassiosira_pseudonana_TpDGAT1 -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------EDPLGRS------------------------DIRISYPPSKPMHRQSNPSYL-SDGSHVQN--YRGLFNLLLLILVLSNFRLLLDTV-------AQHGF--------------IL-------DKLATLQGFSQAPLDF-----------------PFVSGLL-----IVQAFV---VGAYAIEKM------------------------------LSVGLIGNQFGM-LLHVINSNATLGVVMAIV---WYLIDQP-FVGAGLIMQA-TIT--WL-KLISYAHANYDYR-----TSPDTQK---------VTVALVKDLDDGQNV-------------SYPQNVTLKDIYYFWL-----APTLTYQIAF--PRSPFIRWPKVFSL--------TLQLFISVTLAVFLCAQVVA-PNLDSLVK-------NL--EANKGEVRTQQIFDYLLKLSITSTYIWLLGF-YGFFHCFMNLAAELL---RFGDRVFYR-----DWWNASEVSAYWRLWNMPVHYWLVRHV-YFPCIRVG---------------------------MSKKGATFVVF--FFSAVLHEVLISVP----------CHM-IRAWSFLAMMGQIPLIILTKIIDKRVP------G-SSIGNIIFWI-SFCL-------VGQPMAMLLY----------------------------------------------------------------------------------------------------------------------------- Lotus_japonicas_LjDGAT1 -------------------------------------------------------------------------------------------------------MAISEDSESLFAAAAASSVIQSG----------SSVRRRPSAISA----------------------------------V-----------------------------------------------------------------------------------------------------------------------ATVEDESSSEEPVP--------------------VRDSGSDVDDSVSSEQHVSPATAN---REKNQVHDISA-------------------------TKFAYRPSAPAHRRVKESPLSSDNIFRH---HAGLFNLCIVVLVAVNSRLIIENL-------MKYGW--------------LI-------RTGFWF--SSKSLRDW-----------------PLFMCCL-----SLAIFP---FAAFVVEKL------------------------------VQQKCISEP-VV-VLHIFISTAAVVYPVLVI---LRTDSAF-PSGVTLMLFA-CIV--WL-KLVSYAHTNYDMR-----ELTKSIE---------KGEALPNTL----------------NM-DYSYDVSFKSLAYFMI-----APTLCYQPRY--PRSPSIRKGWVLRQ--------LVKLIIFTGVMGFIIEQYIN-PIVQNSQH-------PL--KG-NLLYAIERV----LKLSVPNLYVWLCMF-YCFFHLWLNILAELL---RFGDREFYK-----DWWNAKTFEEYWRMWNMPVHKWMIRHL-YFPCLRNG---------------------------IPKGVAILIAF--LVSALFHELCIAVP----------CHI-FKLWAFGGIMFQVPLILITNYLQNKFR------N-SMVGNMIFWF-IFSI-------LGQPMAVLLYYHD--LMNRKSKLDQS------------------------------------------------------------------------------------------------------------- Chlorella_vulgaris_CvDGAT1 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MAPRASLLSSERIRLLN--QSGVVTLVFIILAAANFRLILENI-------MKYGL--------------RF-------NPFSFLKNAITPSGNT-----------------PLVLCWP-----LLAFFA---LSALAIERFAVRLLDMERRAAAVTDKRSVGYTEMNKAA-ARRASATEHLVF-VLNLLNTTAALLAPCAII---LHTCAEL-MPGFALTMAT-CVL--WL-KLVSYAHVNFDYR-----VARRRGE-------TRPGERGSGQY--PENVEQ--------EL-RYPENIALGNLAYFLA-----APTLCYQITY--PRSKRFRARWMVKK--------LFMFTGGLGLMLFVTEQYIQ-PTIDNSMR-------PL--KEMDWLRMLERI----LKLSIPTLYWWLAMF-YTLFDLWLNILAEVL---RFGDREFYK-----EWWNATTVGEYWRLWNQPVHKWMLRHV-YFPLLRHK---------------------------VPKFYAGFAVF--FISAVFHEVLVGVP----------LHM-VRLWAFWGLMAQVPLMIVTEWLKNKLK------N-DRIGNIVFWI-SFCF-------VGQPLAMTLYYHDHLQGYKHPFQGTPII----------------------------------------------------------------------------------------------------------- Chlorella_ellipsoidea_CeDGAT1 ---------------------------------MPDDASMSQRVEYEGEAQPDRTHVAKCGYLFKYRPYKFTKTWDLRYFELKGKVLEYYLSQKQGANHPRGLVKIEGCVVEIEGRKKSRFWVFSVVDPSGLNLLRMSSESEKEVETWVQALVEAGCTKRYLKECFRARSPLRSADIRWKGED-----------------------------------------------------------------------------------------------------------------------SAGLKRVPSNQSVLDHRWAGSEESAVTGLETADSLADTLPERDGHARRPRQPLPKDYA---SDSGMSESGTT---------------AGPMPRSMTKRHSDMRGSTQLYTESRPSILSTERFAFTQ--HSGILNLMTMVLLATNARLILENL-------MKYGV--------------LT-------NPTRWL-LFLVPKGHT-----------------NLMYCWP-----AMALFA---LIALGIEKLGAKRLALERKASMAKRKRDMRPVEARRKA-AQMAARSECLLL-SLHLANLSAVLVLPTWVV---LISDTPV--PSFMVIIFT-ITL--WM-KLTSYAHCNLDFR-----RLSRDKERRRADRPSRPGGEGLGEMDIPETIHQGVEAVPGKKV-DYPDNLTLRNLAHFLV-----VPALVYQTTF--PTSKRFRGRYIIWN--------VVHLLVAMGVLMIITEQYMA-PTIKTSVA-------PL--RELQVAGIVERL----LKLAVPTLYGWLIIF-YALFHVWLNILAEIT---YFGDREFYK-----DWWNAATIGDYWRLWNVPVHKWLLRHV-YYPCIRRR---------------------------VPKTVAAVAVF--FVSAVFHEMLVGVP----------LHM-VRFWAFWGLMFQVPLLFLTDYIKKRAN------S-NQIGNYVFWF-TFVI-------FGQPMAIMLYYHD--WKKMHPGLANGS------------------------------------------------------------------------------------------------------------ Euonymus_alatus_EaDGAT1 -----------------------------------------------------------------------------------------------------MAANLNEASDLN-----------------------FSLRRRTGGISS----------------------------------------------------------------------------------------------------------------------------------------------------------TTVPDSSSETSSSE----------------ADYLDGGKGAADVKDRGDGAVEFQNSMKNVERIEKHESRVGL------------------------DSRFTYRPSVPAHRTIKESPLSSDAIFKQS--HAGLFNLCIVVLVAVNSRLIIENL-------MKYGW--------------LI-------RSGFWF--SSRSLRDW-----------------PLFMCCL-----TLPVFP---LAAFLFEKL------------------------------AQKNLISEPVVV-LLHIVNTTAAVLYPVLVI---LRCDSAF-MSGVTLMLFA-CIV--WL-KLVSYAHTNYDMR-----ALTKSVE---------KGDTPLSSQ----------------NM-DYSFDVNIKSLAYFMV-----APTLCYQISY--PRTPYVRKGWVVRQ--------FVKLIIFTGLMGFIIEQYIN-PIVQNSQH-------PL--KG-NFLYAIERV----LKLSVPNLYVWLCMF-YCLFHLWLNILAELL---CFGDREFYK-----DWWNAKTVEEYWRMWNMPVHKWMVRHI-YFPCLRNG---------------------------IPKGVAFVISF--LVSAVFHELCIAVP----------CHI-FKLWAFFGIMLQVPLVLITSYLQNKFR------S-SMVGNMMFWF-SFCI-------FGQPMCLLLYYHD--LMNRNGKME--------------------------------------------------------------------------------------------------------------- Echium_pitardii_EpDGAT1 -------------------------------------------------------------------------------------------------------MTIWESPEIISSDEAA-----------------AALRRRGGAKEV-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AEQRLDSEEEKKKEEENGK---------------------------------------LKYTYRASAPAHRRIKESPLSSDAIFKQS--HAGLFNLCIVVLVAVNSRLIIENL-------MKYGW--------------LI-------SSGFWL--SSTSLSDW-----------------PLLICCL-----SLPIFP---LASFVVEKL------------------------------SQQEFISEQVVI-TLHALITTTVIMYPVIVI---LRCDPAV-LSGVILMLFT-CIV--WL-KLVSYAHTNYDMR-----ALAKDCD---------KLQALSGSS----------------ME-DCSFEVNFQALVYFMV-----APTLCYQLRY--PRTPCIRWGWVTRH--------LIKLIIFTGLMGFIIEQYIN-PIVKNSQH-------PL--KG-NLLYAIERV----LKLSVPNIYVWLCMF-YCLFHLWLNILAELL---CFGDREFYK-----DWWNAQTIEEYWRMWNMPVHKWMVRHI-YFPCLRNG---------------------------MPKELAILIAF--LISAIFHELCIAVP----------CHI-FKFWAFIGIMFQVPLVLLTNVLVKKFQ------N-SMVGNMIFWC-FFCI-------LGQPMSLLLYYHD--VLNRKVNAN--------------------------------------------------------------------------------------------------------------- Brassica_napus_BnDGAT1 -------------------------------------------------------------------------------------------------------MEILDSGGVTMPTENGGADL-------------DTLRHRKPRSDS---------------------------------SN-----------------------------------------------------------------------------------------------------------------------GLLPDSVTVSDADV---------------------RDRVDSAVEDTQGKANLAGENEI---RESGGEAGGNV------------------------DVRYTYRPSVPAHRRVRESPLSSDAIFKQS--HAGLFNLCVVVLVAVNSRLIIENL-------MKYGW--------------LI-------RTDFWF--SSTSLRDW-----------------PLFMCCL-----SLSIFP---LAAFTVEKL------------------------------VLQKCISEPVVI-ILHIIITMTEVLYPVYVT---LRCDSAF-LSGVTLMLLT-CIV--WL-KLVSYAHTNYDIR-----TLANSSD---------KANP------------------------EVSYYVSLKSLAYFML-----APTLCYQPSY--PRSPCIRKGWVARQ--------FAKLIIFTGFMGFIIEQYIN-PIVRNSKH-------PL--KG-DLLYGVERV----LKLSVPNLYVWLCMF-YCFFHLWLNILAELL---CFGDREFYK-----DWWNAKSVGDYWRMWNMPVHKWMVRHV-YFPCLRRN---------------------------IPKVPAIILAF--LVSAVFHELCIAVP----------CRL-FKLWAFLGIMFQVPLVFITNYLQERF-------G-SMVGNMIFWF-TFCI-------FGQPMCVLLYYHD--LMNRKGKMS--------------------------------------------------------------------------------------------------------------- Auxenochlorella_protothecoides_ApDGAT1 MSKERVSPWGRLTGSGSKRSSSPPNPLEATIESLKQENQRLKELISERTSQGATQSGYLNKYRPHATASLWAHTWEPRFVVVRTGHLSYYRNEEGVQFHPRGQLDLEGTSVVAEGLKRRAFHTFQIVDSAGATLLRLSSDSPSEARAWMDALERAGCRRR-------------------SGGE-----------------------------------------------------------------------------------------------------------------------EGELARRDSSSTVNTVGGEDSEAESSGGAGAAAVSGKHIGYTSDTSDVQSRPPRRPPS---GNGGGGGHGGH---------HQGSAREGSGEGQPKRKREAMKPSAPLHTATKYSIMSSERVLSSN--QNGMVNLTLLVLAAANFRLILENL-------LKYGL--------------RF-------NPVTFARRALTPQNNP-----------------LLFLCWP-----TLLALC---LAALGIERLALAALRREQARDAAAAKKGEGRSAGGGGKSAVGAGAAEWLIL-ALNVANTSAMLAVPSAVI---HYTDSEV-LPGFALTAVA-IVL--WM-KAVSYAHCNWDLR-----CARRAHE-------LRDGERGSGLL--PAHGDP--------PL-RYPENLTLGNLAYFLA-----VPTLCYQLTY--PRSTRFRIRWLLRHGGIKGGGRVATMLVTLTTMLFIIEQYIE-PTIHNSIQ-------PM--MTMDWPRMVERL----LKLSLPNLYLWLLMF-YTLFDLWLNIVAELT---GFGDREFYKARWGWEWWNATTVGEYWRLWNMPVHSWMLRHV-YFPCVRHK---------------------------IPKFTAGLIVF--FVSAVFHEILVALP----------LHM-VKGWAFYGLMAQVPLMLITEKLKQRFE------S-DRIGNAIFWM-SFCI-------LGQPLSIMLYYHD--WRKEHGA----------------------------------------------------------------------------------------------------------------- Arabidopsis_thaliana_AtDGAT1 -------------------------------------------------------------------------------------------------------MAILDSAGVTTVTENGGGEFVDL----------DRLRRRKSRSDS-------------------------------S--N-----------------------------------------------------------------------------------------------------------------------GLLLSGSDNNSPSDDVGAPADVRDR-----IDSVVNDDAQGTANLAGDNNGGGDNNGG---GRGGGEGRGNA------------------------DATFTYRPSVPAHRRARESPLSSDAIFKQS--HAGLFNLCVVVLIAVNSRLIIENL-------MKYGW--------------LI-------RTDFWF--SSRSLRDW-----------------PLFMCCI-----SLSIFP---LAAFTVEKL------------------------------VLQKYISEPVVI-FLHIIITMTEVLYPVYVT---LRCDSAF-LSGVTLMLLT-CIV--WL-KLVSYAHTSYDIR-----SLANAAD---------KANP------------------------EVSYYVSLKSLAYFMV-----APTLCYQPSY--PRSACIRKGWVARQ--------FAKLVIFTGFMGFIIEQYIN-PIVRNSKH-------PL--KG-DLLYAIERV----LKLSVPNLYVWLCMF-YCFFHLWLNILAELL---CFGDREFYK-----DWWNAKSVGDYWRMWNMPVHKWMVRHI-YFPCLRSK---------------------------IPKTLAIIIAF--LVSAVFHELCIAVP----------CRL-FKLWAFLGIMFQVPLVFITNYLQERF-------G-STVGNMIFWF-IFCI-------FGQPMCVLLYYHD--LMNRKGSMS--------------------------------------------------------------------------------------------------------------- Brachypodium_distachyon_BdDGAT1 -------------------------------------------------------------------------------------------------------MEDSTGGEINAP---------------------PPVQRRPPRPRG-------------------------------GGAT-----------------------------------------------------------------------------------------------------------------------ATAQGFVAALRRRVSSGAAVAARAS-----FAADSGDESGPAEPSSSHRRESSGDVPS---NAGGGGGGGGP-----------------------DFSAFSFRAAAPVHRKAKESPLSSDAIFKQS--HAGLFNLCIVVLVSVNGRLIIENL-------MKYGL--------------LI-------RTGFWF--NSRSFRDW-----------------PLLMCCL-----SLPAFP---LAAYSVEKL------------------------------AFRNLITDAVAT-CLHVILTTAEIVYPVLVI---LMCDSAV-VSGFLLMFIA-CIV--WL-KLVSFAHTNHDIR-----QLTMGGK---------KVDNAPSTA----------------DM-EDLQAPTLGTLIYFMM-----APTLCYQPSY--PRTSHVRKGWLIRQ--------IILYLIFTGIQGFIIEQYIN-PIVVNSEH-------PL--KG-GLLNAVETV----LRLSLPNVYLWLCMF-YCFFHLWLNILAEIL---RFGDREFYK-----DWWNAKTIDEYWRKWNMPVHKWIVRHI-YFPCMRSG---------------------------ISKEVAVFVSF--FVSAVLHELCVAVP----------CRI-VKFWAFLGIMLQIPLITLTSYLKSKFS------D-TMAGNMIFWF-FFCI-------YGQPMCVLLYYHD--VMNRIGKTA--------------------------------------------------------------------------------------------------------------- Bos_Taurus_BtDGAT1 ---------------------------------------------------------------------------------------------------------------------------------MGDRGGAGGSRRRRTGSRP-------------------------------SIQG-----------------------------------------------------------------------------------------------------------------------GSGPAAAEEEVRDV------------------------------GAGGDAPVRDTDKD-------GDVDVGS-------------------------GHWDLRC-----HRLQDSLFSSDSGF-SN--YRGILNWCVVMLILSNARLFLENL-------IKYGI--------------LV-------DPIQVVSLFLKDPYSW-----------------PALCLVI-----VANIFA---VAAFQVEKR------------------------------LAVGALTEQAGL-LLHGVNLATILCFPAAVA---FLLESIT-PVGSVLALMVYTIL--FL-KLFSYRDVNLWCRERRAGAKAKAAL---------AGKKANGGAAQR-------------TV-SYPDNLTYRDLYYFLF-----APTLCYELNF--PRSPRIRKRFLLRR--------LLEMLFLTQLQVGLIQQWMV-PAIQNSMK-------PF--KDMDYSRIVERL----LKLAVPNHLIWLIFF-YWLFHSCLNAVAELM---QFGDREFYR-----DWWNSESITYFWQNWNIPVHKWCIRHF-YKPMLRRG---------------------------SSKWAARTAVF--LASAFFHEYLVSIP----------LRM-FRLWAFTGMMAQIPLA----WIVGRFF------R-GNYGNAAVWL-SLII--------GQPVAVLMYVHDYYVLNREAPAAGT------------------------------------------------------------------------------------------------------------- Homo_sapiens_HsDGAT1 ------------------------------------------------------------------------------------------------------------------------------------MGDRGSSRRRRTGSRP-------------------------------SSHG-----------------------------------------------------------------------------------------------------------------------GGGPAAAEEE------------------------VRDAAAGPDVGAAGDAPAPAPNKD-------GDAGVGS-------------------------GHWELRC-----HRLQDSLFSSDSGF-SN--YRGILNWCVVMLILSNARLFLENL-------IKYGI--------------LV-------DPIQVVSLFLKDPYSW-----------------PAPCLVI-----AANVFA---VAAFQVEKR------------------------------LAVGALTEQAGL-LLHVANLATILCFPAAVV---LLVESIT-PVGSLLALMAHTIL--FL-KLFSYRDVNSWCRR----ARAKAAS---------AGKKASSAAAPH-------------TV-SYPDNLTYRDLYYFLF-----APTLCYELNF--PRSPRIRKRFLLRR--------ILEMLFFTQLQVGLIQQWMV-PTIQNSMK-------PF--KDMDYSRIIERL----LKLAVPNHLIWLIFF-YWLFHSCLNAVAELM---QFGDREFYR-----DWWNSESVTYFWQNWNIPVHKWCIRHF-YKPMLRRG---------------------------SSKWMARTGVF--LASAFFHEYLVSVP----------LRM-FRLWAFTGMMAQIPLA----WFVGRFF------Q-GNYGNAAVWL-SLII--------GQPIAVLMYVHDYYVLNYEAPAAEA------------------------------------------------------------------------------------------------------------- Klebsormidium_flaccidum_KfDGAT1 ----------------MESDASSSNELHELQRRNAELEAEVARLSRQVGRFSDNLVKCGYLNKYRPNMRFLEKPWELRFFTLHGTTLSYWKTERDAADHPRGTHSVAQCMVVVEGLKKGTFFTFRIVDQDQNILARLSTKNEGDGRHW-------------------------------VSCL-----------------------------------------------------------------------------------------------------------------------ESVGLPVVSDEPDHPFLGQAEEPGTAPLRPAQKADDTDSAESSLTHESVKGDGDGLRQ---RKPGSDQSASVSGLHVSTQPSGESDPRPGPSPRKRSVGYTIRAAAPCHRRNKESPLSQSAIFQQS--HAGLFNLSVVILLAVNSRLIIENL-------MKYGL--------------LL-------RFEVSH--LTQALRDW-----------------PLLVCAL-----SVPLFP---GLAVAIEKW-----------------------------KVAAPALSEKVVL-GVHTLNIVVCLVWPAWFI---HRAQAGE-WSSFALMFAS-VIT--WM-KLISYAHTLYDVR-----IALAAGE---------QLEAVPDAH----------------PV-RYPDNLTVKNMCYFLA-----APTLCYQLGY--PRTPHIRWPWIGRQ--------LLKLVVFSSLLLFIINQYVN-PTVANSPH-------PL--AG-SAPRVIERV----LKLSIPTLYVWLCMF-YCFFHLWLNIAAELL---RFGDREFYK-----DWWNATTIEGYWRSWNMPVHRWMVRHI-YFPIIRRG---------------------------HSKGLAMTVVF--FLSAVFHELLIGLP----------CHT-MRLWAFIGILNQLPLVVITNLLAKRYE------SKPMIGNMIFWV-VFCV-------IGQPTCVLLYYHD--IMNRKLKPTSAMDIASFATILG-------------------------------------------------------------------------------------------------- Jatropha_curcas_JcDGAT1 -------------------------------------------------------------------------------------------------------MTILETTTSGGDGVAESSSDLN-----------VSLRRRRKGTSS----------------------------------D-----------------------------------------------------------------------------------------------------------------------GALPELTSNIVELESESGGQ----------VMMDPGMVTEPETEKINGKDCGGDKDKI-----DNRENRGRS------------------------DIKFTYRPSVPAHRALRESPLSSDAIFKQS--HAGLFNLCIVVLVAVNSRLIIENL-------MKYGW--------------LI-------KTGFWF--SSRSLRDW-----------------PLLMCCL-----TLPIFS---LAAYLVEKL------------------------------AYRKYISAPIVI-FFHMLITTTAVLYPVSVI---LSCGSAV-LSGVALMLFA-CIV--WL-KLVSYAHTNYDMR-----AIANSAD---------KGDALSDTS----------------GA-DSSRDVSFKSLVYFMV-----APTLCYQPSY--PRTDSVRKGWVVRQ--------FVKLIIFTGFMGFIIEQYIN-PIVQNSQH-------PL--KG-DLLYAIERV----LKLSVPNLYVWLCMF-YCFFHLWLNILAELL---RFGDREFYK-----DWWNARTVEEYWRMWNMPVHKWMVRHI-YFPCLRHK---------------------------IPRGVALLIAF--FVSAVFHELCIAVP----------CHM-FKLWAFIGIMFQIPLVGITNYLQNKFR------S-SMVGNMIFWF-IFCI-------LGQPMCVLLYYHD--LMNRKGNAELR------------------------------------------------------------------------------------------------------------- Helianthus_annuus_HaDGAT1 -------------------------------------------------------------------------------------------------------MS-------------------------------SDVRRRPITNAA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DGTSDSSSSPSPDVDFNSNDQIAVAH---RKPNGENDRRR-----------------------SVMHYAYRPCTPAHNRIKESPLSSDAIFKQS--HAGLFNLCIVVLVAVNSRLIIENL-------MKYGL--------------LI-------NANFWF--SSRSLRDW-----------------PLLMCCL-----SLPVFP---LAAYIVEKF------------------------------AWTKRIADSAAI-TLHIIITTIAILYPVFMI---MRFDSAV-LSGVTLMLFA-CVN--WL-KLVSFVHANYDMR-----MLVNSAD---------KEKEKSASS----------------NI-EYFYDVNFNSLAYFMV-----APTLCYQITY--PRTTCIRKGWVLRQ--------TIKFIIFTGVMGFIIEQYIN-PIVRNSRH-------PL--KG-DFLYAIERV----LKLSVPNLYVWLCMF-YCFFHLWLNILAEVL---RFGDREFYK-----DWWNAQTVDEYWRLWNMPVHKWMVRHI-YFPCLRIG---------------------------IPKGGAHLIAF--FMPAVFHELCIAVP----------CHI-FKFWAFLGIMLQVPLALVTDFLQRKFQ------N-SMVGNMMFWC-FFCI-------LGQPMSVLLYYHD--LMNRKVNTK--------------------------------------------------------------------------------------------------------------- Glycine_max_GmDGAT1a -------------------------------------------------------------------------------------------------------MAISDEPETVATALNH-----------------SSLRRRPTA-------------------------------------------------------------------------------------------------------------------------------------------------------------AGLFNSPETTTDSS---------------------GDDLAKDSGSDDSISSDAANSQP----QQKQDTDFSV-------------------------LKFAYRPSVPAHRKVKESPLSSDTIFRQS--HAGLFNLCIVVLVAVNSRLIIENL-------MKYGW--------------LI-------KSGFWF--SSKSLRDW-----------------PLFMCCL-----SLVVFP---FAAFIVEKL------------------------------AQQKCIPEPVVV-VLHIIITSASLFYPVLVI---LRCDSAF-LSGVTLMLFA-CVV--WL-KLVSYAHTNYDMR-----ALTKSVE---------KGEALPDTL----------------NM-DYPYNVSFKSLAYFLV-----APTLCYQPSY--PRTPYIRKGWLFRQ--------LVKLIIFTGVMGFIIEQYIN-PIVQNSQH-------PL--KG-NLLYAIERV----LKLSVPNLYVWLCMF-YCFFHLWLNILAELL---RFGGREFYQ-----DWWNAKTVEDYWRMWNMPVHKWMIRHL-YFPCLRHG---------------------------IPKAVALLIAF--LVSALFHELCIAVP----------CHI-FKLWAFGGIMFQVPLVFITNYLQNKFR------N-SMVGNMIFWF-IFSI-------LGHPMCVLLYYHD--LMNRKGKLD--------------------------------------------------------------------------------------------------------------- Arabidopsis_thaliana_AtDGAT2 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MGG-----------------------------------SREFRAEEHSNQFHSIIAMAI--WLGAIHFNVALVLCS-----------------------------------------------LIF--LPPSLS-------------------LMVLGLL-----SLFIFIPIDHRSKYGRKL------------------------------ARYICKHACNYF-PVSLYVEDYEAFQPNRAYVFGYEPHSVL-PIGVVAL----CDLTGFM---------------------------------------------------------------PIP---NIKVL----------ASSAIFYT----PFLRHI-WTWL-----------GLTAASRKNFTSLLDSGYSC-VLVPGGVQ-------ET------------------FHMQHDAENVFLSRR-RGFVRIAMEQGSPLVPVFCFGQARVYK------WWKPD-CDLYLKL-------------------------------------------------SRAIRFTPICF-------WGVFGSPLP----------CRQ--------------PMHVVVGKPIEVTK----TLK-PTDEEIAKFHGQYVE----------ALRDLFERHKSRVGYDLELKIL-------------------------------------------------------------------------------------------------------------- Jatropha_curcas_JcDGAT2 -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MVGGDGNGRRKKRKHKKMGMEMAMAEEEKKKQKNTNGEL--------------------------------TIFKSREIYRTNLIHAVVALGL--WLGSIHFNFLLLFLS-----------------------------------------------FLFLPFSKFLLVV-----------------GLLLVFM-----IIPIND----GSRLGRRL------------------------------CRYICRHACSHF-PITLHVEDINAFRSDRAYVFGYEPHSVF-PLGVVVLADH--VG--FL---------------------------------------------------------------PLP---KIKVL----------ASSAVFYT----PFLRHI-WSWC-----------GLTPATKKNFTSLLDAGYSC-IVVPGGVQ-------ET------------------FYMKHGTEIAFLNKR-RGFIRIAMEMGKPLVPVFCYGQSHAYK------WWKPDGK-LFMQF-------------------------------------------------ARAIKFTPIVF-------WGILGSPLP----------FQH--------------PMHVVVGKPIELKK----NPQ-PTMEEVAEVHRQFVA----------SLKDLFERHKARVGYSDLKLEIL------------------------------------------------------------------------------------------------------------- Vernicia_fordii_VfDGAT2 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MGMVEVKNEEEV----------------------------------------------TIFKSGEIYPTNIFQSVLALAI--WLGSFHFILFLVSSSIFLPFSKFL-------LVIGL--------------LL-----------FF--MVIPINDR-----------------SKLGQCL-----------------------------------------------------FSYISRHVCSYF-PITLHVEDINAFRSDRAYVFGYEPHSVF-PIGVMILSLG------LI---------------------------------------------------------------PLP---NIKFL----------ASSAVFYT----PFLRHI-WSWC-----------GLTPATRKNFVSLLSSGYSC-ILVPGGVQ-------ET------------------FYMKQDSEIAFLKAR-RGFIRIAMQTGTPLVPVFCFGQMHTFK------WWKPDGE-------------------------------------------------------LFMKIARAIKF--TPTIFWGVLGTPLP----------FKN--------------PMHVVVGRPIEVKQ----NPQ-PTAEEVAEVQREFIA----------SLKNLFERHKARVGYSDLKLEIF------------------------------------------------------------------------------------------------------------- Nannochloropsis_oceanica_NoDGAT2B --------------------------------------------------------------------------------------------------------MVGAGVLVDVPISSHSLFF-------------IALRLRPSALMA------------------------------------------------------------------------------------------------------------------------------------------------------------RLLGVAVDKLPVYKPTSSSCLAPPGRRDDEGTSRCTIHIAIASTYEYKRPHGPDHY---PLNNPPSSVKI------------------------LSEARYHHKQALQPRSAVLFWAKTRVTRRT--PTHAFYLCFLFILTIPPYAHVRTRTP-----HRRGTTSKMAKANFPPSARYV-------NMTQVYATGAHNMPDEDR---------------LKVMNGL-----SKPLTEAK-PGDLGFGDV------------------------------ESMTFCEEFVAI-MFLLIIVGSMLWIPIAVLGFALYVRSAMAWVVMLIVFFTLSLH--PVPRIHDMVHSPLNHFIFKYFSLKMASD---------APLDSAGRY----------------IFVAPPHGVLPMGNLMTVH-----AMKACGGLEFRGLTTDVALRLPLFRH--------YLGAIGTIAATRHVAKQYLD-KGWSIGIS-----------SG-----GVAEI----FEVNNKDEVVLMKER-KGFVKLALRTGTPLVACYIFGNTKLLS-----AWYDDGGVLE-------GLSRYLKCGV------------------------------------LPLWGR-----------------FGLP----------------------LMHRHPVLGAMAKPIVVPK---VEGE-PTQEMIDEYHSLFCQ----------TLVDLFDRYKTLYGWPDKKLLIK------------------------------------------------------------------------------------------------------------- Phaeodactylum_tricornutum_PtDGAT2 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MERTKIQDEHKSPPNP-------------------------------------------STFRW----------------------------------------------------------FLGLL-----VASTFS----MVYFVAPF-------------------------------------------YMLTVVFALVFKYPSVEI---AWMYAIPMIVSAILPPMA-SPL--AL-RLISPLIDYFDYE-----EIHETSPV------------------------------------DVQKEILSNNKNYLLVFQPHGALSFTGITSM--VTAPQAMKGKLPTA--------VADALLYTPILKHVLGIF---GLISASKS--------------SMIRTLKKK-------GVEGTIV-----------LYVGGIAEL----------FLT--------DETDERLYLRKRKGFIKLALQQGVDVVPVYLFG---------------------------NTNALSVLKTG--FLAAISRKLQISL-----------TYI-WGKW-YLPIPRDCKLLYASGQPLGMPH----ILD-PSQADIDKWHEKYCS---------EVMRIFEKYKEKVPEYKHKKLEII------------------------------------------------------------------------------------------------------------- Ricinus_communis_RcDGAT2 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MGEEANHNNNNNNINSNDEKNEEK-------------------------------------------SNYTVVNSRELYPTNIFHALLALSI--WIGSIHFNLFLLFIS-----------------------------------------------YLF----LSFPTF-----------------LLIVGFF-----VVLMFIPIDEHSKLGRRL------------------------------CRYVCRHACSHF-PVTLHVEDMNAFHSDRAYVFGYEPHSVF-PLGVSVLSDHFA----VL---------------------------------------------------------------PLP---KMKVL----------ASNAVFRT----PVLRHI-WTWC-----------GLTSATKKNFTALLASGYSC-IVIPGGVQ-------ET------------------FYMKHGSEIAFLKAR-RGFVRVAMEMGKPLVPVFCFGQSNVYK------WWKPDGE-LFMKI-------------------------------------------------ARAIKFSPIVF-------WGVLGSHLP----------LQR--------------PMHVVVGKPIEVKQ----NPQ-PTVEEVSEVQGQFVA----------ALKDLFERHKARVGYADLTLEIL------------------------------------------------------------------------------------------------------------- Nannochloropsis_oceanica_NoDGAT2A -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MTPQADITSKTTPNLKTAA--------------------------------------SSPSKTSPAPSVQYKAANGKVITVAMAEQDDGNMGIFRECFAM--------------------VTMGI--------------IM----------SWY--YIVVI--------------------LSLLCLV-----GICIFP------------------------------------------AWRAVAATVFVL------------MWSAALLPLDYQGWDAF-CNSFIFRL--------WR----DYFHYEYVLE-----EMIDPNK-------------------------------------RYLFAEMPHGI--FPW-----GEVISISITK--QLFPGSRVGSIGAS----------VIFLLPGLRHFFAWIGCR-PASPENIK-------KIFEDGQDCAVTVGGVAEM-FLVGGDKERLYLKKH-KGFVREAMKNGADLVPVFCFGNSKLFN-----------VVGESSR-----VSMGLMKRL------------------------------------SRRIKASVLIF-------YGRLFLPIP----------IRH--------------PLLFVVGKPLPVVH----KAE-PTKEEIAATHALFCE----------KVEELYYKYRPEWETRPLSIE--------------------------------------------------------------------------------------------------------------- Chlamydomonas_reinhardtii_CrDGAT2 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MPLAKLRNVVLEYAAI--AI--YVSAIYTSVVLLPSA------------------------------------L-------ALFYLF--GATSPSAW-----------------LLLAAFL-----ALTFTPLQLTTGALSERF------------------------------VQFSVARAAAYF-PTRVVVTDPEAFRTDRGYLFGFCPHSAL-PIALPIAFAT-TSP--LL---------PKELR-------------------------------------------------GRTHGL---------------ASSVCFSA----PIVRQLYW-WL-----------GVRPATRQSISGLLRARKVA-VLVPGGVQ-------EV------------------LNMEHGKEVAYLSSR-TGFVRLAVQHGAPLVPVWAFGQTRAYS------WFRPGPP---------LVPTWLVERI------------------------------------SRAAGAVPIGM-------FGQYGTPMP----------HRE--------------PLTIVVGRPIPVPELAPGQLE-PEPEVLAALLKRFTD----------DLQALYDKHKAQFGKGEELVIM-------------------------------------------------------------------------------------------------------------- Klebsormidium_flaccidum_KfDGAT3 -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MPGVCSTSGRTHLR----------------------------------------------------SPGFRRRATAPLFAETGHEEF--YSGA----------------------------------------------VV---------------GKRGLTRT-----------------SVTASAV--------------LREGQLDDI--------------------------------YQRARDLGRA-------EDVAAGHPT--------------QEGFLALSTE-VRE--MRKQLNSMEKAMRKMK-----DSSSSSS---------SSSSSSSSS-------------------SSSDDGMGKSVRKAMK-----LEAKRRKADR--KAASKGLKGLRARA--------GALMMDRMGAVDGLQREAAAVGVMTST----------------DVLRVAA------AKSAVKAGKVEVCMS------------GKCR---KYGGMGILQ------------------------------------AVNAA---------------------------LPAGSAVEAS----------------P----------CKC-------LGKCGSGPNVKV--RPEGTSSTLHTHVE-PNDVEAILWR-HFGLEKSGQRPLGPRIPAVASASK--MLELVS------------------------------------------------------------------------------------------------------------------ Vernicia_fordii_VfDGAT3 -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MELSGVA---------------------------------------LRQLPCFSSRIVNSS--EF-----------------------------RDKGH--------------LQ-------CYNYYH-------GEA-----------------RFVRCGP-----SS-------LSGIKKEKE---------------------------------SAMSKKKLK-LLKGLSKDLSVFFQIDPD-----------NSQAKLVAEA-AQE--LIKELQELRAKEKELK-------RNKKQ---------EKAKLKAEA-------------------RINYQCQSSTSEC--------SDSEC---------DSNLRNGVVQPV--------LVELQQQLEAIGH--------DTSSNLSK--------------------AQA----KRIEV-----------------------------CMGNK----------------------------------------CKKSG------------------------------GAALLEAF----ESVVGVEGAVVG----------CKC-------MGKCRDGPNVRVNAAHDPI----------TTPPNSY----PLCI--------GVGLEDVGVIVANYFQDKDKHLGLAPAS---------------------------------------------------------------------------------------------------------- Arachis_hypogaea_AhDGAT3 -------------------------------------------------------------------------------------------------------MEV-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SGAVLRNVTCPSFSVHVSSRR--RGG--DSCVTVPVRM---------------------------------------------------------RKK-----------------AVVRCCC-----GFSDSG---HVQYYGDEK-------------------------------KKENGTAMLST-KKKLKMLKKRVLFDDLQG---------------NLTWDA-AMV--LMKQLEQVRAEEKELK-----KKRKQEK---------KEAKLKASK----------------M--NTNPDCESSSSSSSSESESESSESECDNEVV--DMKKNIKVGVAVA---------VADSPRKAETMILYTSLVAR-DVSANHHH-------H---NAVELFSRNNDISVGSINGGLKNENTAVITT-EAIPQKRIEV--------CMGNK----------------------------------------CKKSG------------------------------SIALLQEFERVVGAEGGAAAAVVG----------CKC-------MGKCKSAPNVRIQNSTADKIA------E-GFNDSVKVPANPLCI--------GVAWRMLKPLWLRFLGENQESTNE-------------------------------------------------------------------------------------------------------------- ; END; BEGIN ASSUMPTIONS; TYPESET * UNTITLED = unord: 1 - 1160; END; BEGIN CODONS; CODESET * UNTITLED = universal: 1 - 1160; END; BEGIN MESQUITECHARMODELS; ProbModelSet * UNTITLED = 'Mk1 (est.)': 1 - 1160; END; BEGIN TREES; Title Imported_trees; ID 01598fff6c8e1; LINK Taxa = Taxa; TRANSLATE [0] 1 Paracoccidioides_brasiliensis_PbDGAT1, [1] 2 Olea_europaea_OeDGAT1, [2] 3 Phaeodactylum_tricornutum_PtDGAT1, [3] 4 Perilla_frutescens_PfDGAT1, [4] 5 Nicotiana_tabacum_NtDGAT1, [5] 6 Mus_musculus_MmDGAT1, [6] 7 Medicago_truncatula_MtDGAT1, [7] 8 Nannochloropsis_oceanica_NoDGAT1B, [8] 9 Nannochloropsis_oceanica_NoDGAT1A, [9] 10 Physcomitrella_patens_PpDGAT1, [10] 11 Vernonia_galamensis_VgDGAT1, [11] 12 Vernicia_fordii_VfDGAT1, [12] 13 Zea_mays_ZmDGAT1, [13] 14 Vitis_vinifera_VvDGAT1, [14] 15 Tropaeolum_majus_TmDGAT1, [15] 16 Sus_scrofa_SsDGAT1, [16] 17 Ricinus_communis_RcDGAT1, [17] 18 Toxoplasma_gondii_TgDGAT1, [18] 19 Thalassiosira_pseudonana_TpDGAT1, [19] 20 Lotus_japonicas_LjDGAT1, [20] 21 Chlorella_vulgaris_CvDGAT1, [21] 22 Chlorella_ellipsoidea_CeDGAT1, [22] 23 Euonymus_alatus_EaDGAT1, [23] 24 Echium_pitardii_EpDGAT1, [24] 25 Brassica_napus_BnDGAT1, [25] 26 Auxenochlorella_protothecoides_ApDGAT1, [26] 27 Arabidopsis_thaliana_AtDGAT1, [27] 28 Brachypodium_distachyon_BdDGAT1, [28] 29 Bos_Taurus_BtDGAT1, [29] 30 Homo_sapiens_HsDGAT1, [30] 31 Klebsormidium_flaccidum_KfDGAT1, [31] 32 Jatropha_curcas_JcDGAT1, [32] 33 Helianthus_annuus_HaDGAT1, [33] 34 Glycine_max_GmDGAT1a, [34] 35 Arabidopsis_thaliana_AtDGAT2, [35] 36 Jatropha_curcas_JcDGAT2, [36] 37 Vernicia_fordii_VfDGAT2, [37] 38 Nannochloropsis_oceanica_NoDGAT2B, [38] 39 Phaeodactylum_tricornutum_PtDGAT2, [39] 40 Ricinus_communis_RcDGAT2, [40] 41 Nannochloropsis_oceanica_NoDGAT2A, [41] 42 Chlamydomonas_reinhardtii_CrDGAT2, [42] 43 Klebsormidium_flaccidum_KfDGAT3, [43] 44 Vernicia_fordii_VfDGAT3, [44] 45 Arachis_hypogaea_AhDGAT3; TREE Imported_tree_1 = ((((((((((((34:0.10645586,20:0.11115865)0.6740:0.01238854,7:0.17341645)0.9970:0.02991097,14:0.15593243)0.4550:0.00760165,23:0.1470949)0.2210:0.00383853,(17:0.12667588,(32:0.07052921,12:0.07078433)1.0000:0.04099903)1.0000:0.06338599)0.2260:0.00444585,(15:0.18222802,(27:0.08874399,25:0.07377494)1.0000:0.08199508)0.9140:0.02439555)0.6980:0.01557174,((33:0.12997111,11:0.14866742)1.0000:0.05846359,(5:0.17379308,(4:0.16733157,(24:0.12011717,2:0.13634489)0.6430:0.01190614)0.8740:0.02011194)0.4910:0.00372128)0.3550:0.00273648)0.9920:0.03735805,(28:0.28987448,13:0.20448987)0.4890:0.011075)0.9710:0.05173484,10:0.21503852)0.7760:0.04988641,31:0.42490378)0.9440:0.07179911,((((9:0.41696084,8:0.7441718)0.5380:0.04844423,(3:0.36092842,19:0.24481714)1.0000:0.21801104)0.2960:0.01842137,(1:0.61003521,18:0.61458624)0.6430:0.04621675)0.2740:0.03217439,(((26:0.32460854,21:0.18695482)0.9800:0.0652807,22:0.47415655)0.9630:0.09475569,(6:0.08759703,(30:0.05035418,(29:0.02918709,16:0.05085562)0.9990:0.03252387)0.9900:0.0218956)1.0000:0.45464585)0.4290:0.0117138)0.3890:0.05049282)0.9480:0.3013851,((39:1.01824878,((41:0.75796031,38:0.95583761)0.3780:0.02848393,(42:0.47050666,(35:0.20250994,(37:0.19732962,(36:0.16546269,40:0.18991832)0.7580:0.03822472)0.9970:0.1378826)1.0000:0.29677333)1.0000:0.26721337)0.7880:0.23310913)0.7660:0.052388955,(43:1.01423269,(45:0.66742301,44:0.46800326)1.0000:0.41410567)0.8950:0.19750552):0.052388955)[% ] [% ] [% setBetweenBits = selected ]; END; Begin MESQUITE; MESQUITESCRIPTVERSION 2; TITLE AUTO; tell ProjectCoordinator; timeSaved 1484179901411; getEmployee #mesquite.minimal.ManageTaxa.ManageTaxa; tell It; setID 0 4003394763259141052; endTell; getEmployee #mesquite.charMatrices.ManageCharacters.ManageCharacters; tell It; setID 0 4765022723906913187; mqVersion 310; checksumv 0 3 3814131064 null getNumChars 1160 numChars 1160 getNumTaxa 45 numTaxa 45 short false bits 1048575 states 1048575 sumSquaresStatesOnly 2.97492896058148E14 sumSquares 2.97492896058148E14 longCompressibleToShort false usingShortMatrix false NumFiles 1 NumMatrices 1; mqVersion; endTell; getWindow; tell It; suppress; setResourcesState false false 100; setPopoutState 300; setExplanationSize 0; setAnnotationSize 0; setFontIncAnnot 0; setFontIncExp 0; setSize 1916 961; setLocation -8 -8; setFont SanSerif; setFontSize 10; getToolPalette; tell It; endTell; desuppress; endTell; getEmployee #mesquite.trees.BasicTreeWindowCoord.BasicTreeWindowCoord; tell It; makeTreeWindow #4003394763259141052 #mesquite.trees.BasicTreeWindowMaker.BasicTreeWindowMaker; tell It; suppressEPCResponse; setTreeSource #mesquite.trees.StoredTrees.StoredTrees; tell It; setTreeBlock 1; setTreeBlockID 01598fff6c8e1; toggleUseWeights off; endTell; setAssignedID 970.1484179615833.2616711127028026757; getTreeWindow; tell It; setExplanationSize 30; setAnnotationSize 20; setFontIncAnnot 0; setFontIncExp 0; setSize 1816 889; setLocation -8 -8; setFont SanSerif; setFontSize 10; getToolPalette; tell It; endTell; setActive; getTreeDrawCoordinator #mesquite.trees.BasicTreeDrawCoordinator.BasicTreeDrawCoordinator; tell It; suppress; setTreeDrawer #mesquite.trees.SquareLineTree.SquareLineTree; tell It; setNodeLocs #mesquite.trees.NodeLocsStandard.NodeLocsStandard; tell It; branchLengthsToggle off; toggleScale on; toggleBroadScale off; toggleCenter on; toggleEven on; setFixedTaxonDistance 0; endTell; setEdgeWidth 4; showEdgeLines on; orientRight; endTell; setBackground White; setBranchColor Black; showNodeNumbers off; showBranchColors on; labelBranchLengths off; centerBrLenLabels on; showBrLensUnspecified on; showBrLenLabelsOnTerminals on; setBrLenLabelColor 0 0 255; setNumBrLenDecimals 6; desuppress; getEmployee #mesquite.trees.BasicDrawTaxonNames.BasicDrawTaxonNames; tell It; setColor Black; toggleColorPartition off; toggleColorAssigned on; toggleShadePartition off; toggleShowFootnotes on; toggleNodeLabels on; toggleCenterNodeNames off; toggleShowNames on; namesAngle ?; endTell; endTell; setTreeNumber 1; setDrawingSizeMode 0; toggleLegendFloat on; scale 0; toggleTextOnTree off; togglePrintName on; showWindow; endTell; desuppressEPCResponse; getEmployee #mesquite.trees.ColorBranches.ColorBranches; tell It; setColor Red; removeColor off; endTell; getEmployee #mesquite.ornamental.BranchNotes.BranchNotes; tell It; setAlwaysOn off; endTell; getEmployee #mesquite.ornamental.ColorTreeByPartition.ColorTreeByPartition; tell It; colorByPartition off; endTell; getEmployee #mesquite.ornamental.DrawTreeAssocDoubles.DrawTreeAssocDoubles; tell It; setOn on; setDigits 4; writeAsPercentage off; toggleCentred off; toggleHorizontal on; toggleWhiteEdges on; toggleShowOnTerminals on; setFontSize 10; setOffset 0 0; endTell; getEmployee #mesquite.ornamental.DrawTreeAssocStrings.DrawTreeAssocStrings; tell It; setOn on; toggleCentred on; toggleHorizontal on; setFontSize 10; setOffset 0 0; toggleShowOnTerminals on; endTell; getEmployee #mesquite.trees.TreeInfoValues.TreeInfoValues; tell It; panelOpen false; endTell; endTell; endTell; getEmployee #mesquite.charMatrices.BasicDataWindowCoord.BasicDataWindowCoord; tell It; showDataWindow #4765022723906913187 #mesquite.charMatrices.BasicDataWindowMaker.BasicDataWindowMaker; tell It; getWindow; tell It; setExplanationSize 30; setAnnotationSize 20; setFontIncAnnot 0; setFontIncExp 0; setSize 1816 889; setLocation -8 -8; setFont SanSerif; setFontSize 10; getToolPalette; tell It; endTell; setTool mesquite.charMatrices.BasicDataWindowMaker.BasicDataWindow.arrow; colorCells #mesquite.charMatrices.ColorByState.ColorByState; tell It; setStateLimit 9; toggleUniformMaximum on; endTell; colorRowNames #mesquite.charMatrices.TaxonGroupColor.TaxonGroupColor; colorColumnNames #mesquite.charMatrices.CharGroupColor.CharGroupColor; colorText #mesquite.charMatrices.NoColor.NoColor; setBackground White; toggleShowNames on; toggleShowTaxonNames on; toggleTight off; toggleThinRows off; toggleShowChanges off; toggleSeparateLines off; toggleShowStates on; toggleAutoWCharNames off; toggleAutoTaxonNames off; toggleShowDefaultCharNames off; toggleConstrainCW on; toggleBirdsEye off; toggleShowPaleGrid off; toggleShowPaleCellColors off; toggleShowPaleExcluded off; togglePaleInapplicable on; toggleShowBoldCellText off; toggleAllowAutosize off; toggleColorsPanel off; toggleLinkedScrolling on; toggleScrollLinkedTables off; endTell; showWindow; getWindow; tell It; forceAutosize; endTell; getEmployee #mesquite.charMatrices.AlterData.AlterData; tell It; toggleBySubmenus off; endTell; getEmployee #mesquite.charMatrices.ColorCells.ColorCells; tell It; setColor Red; removeColor off; endTell; getEmployee #mesquite.categ.StateNamesStrip.StateNamesStrip; tell It; showStrip off; endTell; getEmployee #mesquite.charMatrices.AnnotPanel.AnnotPanel; tell It; togglePanel off; endTell; getEmployee #mesquite.charMatrices.CharReferenceStrip.CharReferenceStrip; tell It; showStrip off; endTell; getEmployee #mesquite.charMatrices.QuickKeySelector.QuickKeySelector; tell It; autotabOff; endTell; getEmployee #mesquite.charMatrices.SelSummaryStrip.SelSummaryStrip; tell It; showStrip off; endTell; getEmployee #mesquite.align.AlignToDropped.AlignToDropped; tell It; gapCosts 8 3 2 2; subCosts 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5; endTell; getEmployee #mesquite.molec.SequenceInfoEditor.SequenceInfoEditor; tell It; panelOpen false; endTell; endTell; endTell; endTell; end;