#NEXUS BEGIN TAXA; TITLE Taxa; DIMENSIONS NTAX=37; TAXLABELS Xenopus_laevis_Ceacam325N Xenopus_laevis_Ceacam326N Xenopus_laevis_Ceacam327N Xenopus_laevis_Ceacam328N Xenopus_laevis_Ceacam329N Xenopus_laevis_Ceacam330N Xenopus_laevis_Ceacam331N Xenopus_laevis_Ceacam332N Xenopus_laevis_Ceacam333N Xenopus_laevis_Ceacam334N1 Xenopus_laevis_Ceacam335N1 Xenopus_laevis_Ceacam338N Xenopus_laevis_Ceacam339N Xenopus_laevis_Ceacam340N1 Xenopus_laevis_Ceacam341N Xenopus_laevis_Ceacam342.L_N Xenopus_laevis_Ceacam343N1 Xenopus_laevis_Ceacam342.S_N Xenopus_laevis_Ceacam376.L_N Xenopus_laevis_Ceacam377N Xenopus_laevis_Ceacam378N Xenopus_laevis_Ceacam379N Xenopus_laevis_Ceacam380N Xenopus_laevis_Ceacam381N Xenopus_laevis_Ceacam382N Xenopus_laevis_Ceacam383N Xenopus_laevis_Ceacam384N Xenopus_laevis_Ceacam385N Xenopus_laevis_Ceacam386N Xenopus_laevis_Ceacam387N Xenopus_laevis_Ceacam388N Xenopus_laevis_Ceacam389.L_N Xenopus_laevis_Ceacam390.L_N Xenopus_laevis_Ceacam376.1.S_N Xenopus_laevis_Ceacam376.2.S_N Xenopus_laevis_Ceacam389.S_N Xenopus_laevis_Ceacam390.S_N ; END; BEGIN CHARACTERS; TITLE Xenopus_laevis; DIMENSIONS NCHAR=109; FORMAT DATATYPE = Protein GAP = - MISSING = ?; MATRIX Xenopus_laevis_Ceacam325N QNVSR--NESESVIFTVKLNLPAQNQRLVTWRFGTST-IATAIQGNTPTYSN------SCTDRCSLYGNASLQLDNVTRADTGNYTLTV--TNIDTTVQQTEQFHLTVY Xenopus_laevis_Ceacam326N ENVAG--TEGKSVYLTVKLDLPAM--WQVIWRVNTSTQIVTVSTGGSPTYTD------RYRNRCH-YDNTTLRLDNLTHADTGEYSLSV--TNQNTGDTVTRSVYLTVY Xenopus_laevis_Ceacam327N QNVSR--NESESVIFTVKLNLPAQNERTVTWKFGTSP-IASAALGNPPTYNN------SCTDRCRLYGNTNLQLDNLTPADTGEYTVNV--FNIITAVQQTEQFHLTVY Xenopus_laevis_Ceacam328N QNVSG--NEGGSVTLTVKLNLPAQNERTVTWKFGVST-IATAVLGNPPTYNN------SCTDRCSLYGNANLQMDNLTPADTGEYTVTV--FNILTSQQQTEQFHLTVY Xenopus_laevis_Ceacam329N ENVSG--TEGKSVYLTVKLDLPAM--RQVQWRVNTSMIIVTVLPGGPPSYTD------NYRGRCHLYDNTTLRLDNLTHADTGEYSLSV--TNQSSGATVTGSVYLTVY Xenopus_laevis_Ceacam330N RNVSG--TVGKSVTLPVTLTLPAQ--SSIQWKFKNDF-IVTAQPNGIPFYYG------AYEGRCHLYENAALQLDNLTLKDTGEYTLTV---IPTNGATQTEVFYLSVY Xenopus_laevis_Ceacam331N QNVSG--NQGGTVTLTVKLNLPAQNQWVVTWRFGVSP-IASAAVGNPPTYNN------SCTDRCRLYGNANLQLDNLTPADTGEYTVIV--TNINAGQQQTEQFHLTVY Xenopus_laevis_Ceacam332N ENVAG--TEGKSVYLTVKLDLPAM--RQVQWRVNSSTLIVIGSTGGSPAYTD------NYRGRCHLYDNTTLRLDNLTHADTGEYSLSV--SNLDSGATVTGSVYLTVY Xenopus_laevis_Ceacam333N QNVSG--NEGESVIFTVKLNLPAQNQRAVTWRFGVSP-IASAALGNPPTYNN------SCTGRCSLYGNASLQLDNLTPRDEGQYTLLI--TNIDTAQQQTEQFHLTVY Xenopus_laevis_Ceacam334N1 RE-SG--ALGKSVNLTVKLNLPTQ--REVQWKFGANSIIATAQLNNPPLYYG------SYRGRCHLYDNTTLQLDNLTPADTGVYWLFV--SNVDTAAQQNGSISLTVY Xenopus_laevis_Ceacam335N1 RNVSG--TVGKSVTLPVTLTLPAQ--RSIQWKFNNDF-IATAQPNGIPFYYG------AYEGRCHLYENAALQLDNLTPADTGEYTLSV---IPSSGATQTEMIYLSVY Xenopus_laevis_Ceacam338N EE-SG--IEGKSVNLTANLNLPTQ--REVQWRFGTNIIIATAQLNNTPLYYG------SYRGRCHLYDNTTLQLDNVTPADTGQYSLFV--TNVDTATQKNGTVNLTVY Xenopus_laevis_Ceacam339N QNVSG--NEGESVTLTVKLNLPAQNQRVITWRFGVSP-IASAILSNPPTYNN------SCTDRCRLYGNITLQLDNLTPRDEGQYTFLV--TNIITGQQQTEQFHLTIY Xenopus_laevis_Ceacam340N1 KNVQG--DERQSVTLSVNLRVNLFENQQIMWYFNTNTPVAFETTNSTPSYIW------GCTGRCTLFENATLQMDNLIPANQGNYTLTI--MNWDTGSTVSGSVYLTVQ Xenopus_laevis_Ceacam341N NNEEV--IEGESVSLSVKLNLSEY--QMIIWKFDTYNLVALETMNNTPICFP------EYEGRCTLFENATLQLDNLTPADQGNYTVTV--LDVETGLSMSGSVYLTVL Xenopus_laevis_Ceacam342.L_N RQFDG--AVGGSVFMFTTLEVPPR--NIITWTAGSNT-IATLEDGQNPTYSS------ICVSRCELFQNATLRLDRLLVSDPKSYDQSI--KNKDDDKTTSIPVTLIVH Xenopus_laevis_Ceacam343N1 QNVSG--NEGESVTLTVKLNLPAQDQRVVTWRFGDSP-IASAAVGNSPTYNN------SCTDRCTLYGNANLQLDNLTPRDEGQYTLLV--TNTVTAQQQTEQFHLTVY Xenopus_laevis_Ceacam342.S_N RHFDG--AVGGSVFMFTYLDVPPH--YVITWTTGSTT-LASLEDGKSPTYGS------ICATRCELFQNATLRLDSLMSNDPKSYMQSI--KNKANDLTTSIPVTLHVH Xenopus_laevis_Ceacam376.L_N DLVPQCALIGKNVTFSVRGINGKL--NSFSWYLGNNPSASDQIINYVVGLTPPTTLGPKNFSDAIGLPNGSLLITNLKDQYSNNYTVQV----QSDTAN-QASINLSVK Xenopus_laevis_Ceacam377N QLVPSHPLINKSVTLNVRGITGTV--RAFRWYFGSNPDASNQILHYNPNSNPPQTPGDQYFHRAHGLANGSLHISDLVRTDQGNYMVMI----LARDIE-RVTVYLPIY Xenopus_laevis_Ceacam378N QPIPEYPVVNQPVTLSVSDISGTI--ISFSWYKGLSTDNSTLILTYILSSNPVETPGPQHFPQASGLPNGSLRISKI--ANRKIYTVQI----QADSLT-QASINLPVY Xenopus_laevis_Ceacam379N QPIPEHPVINQPVTLKVSGVRGVI--RSFSWYKGRFVDDFSLILTYDARSNTVKTRGPEFFPRASGLPDGSLQISKLYKAVRRYYTVQI----QADSLT-QETINLPVY Xenopus_laevis_Ceacam380N QLMPEYPVDNQPVTLSVSGVIGII--ESFSWYKSSTVVNSSLILTYNSSSYT-ETQGPQYFSRASGLPDGSLSISTIYTTDQTYYTVQV----EADSLT-VDTIYLRVY Xenopus_laevis_Ceacam381N QLIPQYPVVNQSVTLSITGVTGTI--RQFSWFKVSSVLGYSQIFSVNPSLNT-AKPGPQYFPRASWFPNGSLQISGLVPIDQGTYSVQIWASNTSHTTSNTTSVFLTVY Xenopus_laevis_Ceacam382N QLNPKYPVANQPVTFSVSGFRGTV--LSFSWYRGLPVDNSCLILTYNSSSNPKETRGQRYSSQFSVLPDGSLKISSLSSSYRDYYTVQV----QAESLT-QKSIYPQYY Xenopus_laevis_Ceacam383N KPIPEYPVVNQPVTLKVNGVRGTI--RSISWYKGRSVDRSFLILSYNATYNA-KTQGPEFFPQAKVLSDGSLSISGLYKAVRRYYTVQI----EAESLT-QESIDLPVY Xenopus_laevis_Ceacam384N QPIPEYPVVNQPVTLSVSDISGTI--ISFSWYKGSSISNSYLILTYNSTSNPVQTPGPQYIPHSSGLPNGSLHILELSTSNRGNYIVQI----QPGSQT-SQYINLPVY Xenopus_laevis_Ceacam385N QLIPQYPVVNQSVTLSVTGVTGTI--RVFAWYKGSSVDTNNQIFNVIPSLNS-VTHGRQYFSRASQFPNGSLQISGLVPTDQGNYTVFI----QTAEHTEQHTVLLTVY Xenopus_laevis_Ceacam386N QLIPQYPVVNQSVTLSVTGVTGTI--REFTWYKGSVAAAPNQIFNVTPSLNS--TNGTQYFPQAKGFRNGSLQISGLVPSDRGNYVVQV----QTGSVT-QVTVFLPVY Xenopus_laevis_Ceacam387N QLIPQYPMVRQSVTLSVTGVTGTI--RQFTWYKGSSTDDNNQIFNVIPETNS-VTNGPQYFSRASHFPNGSLQISGLVPTDQGNYTVFI----QTIEGTAQHTVLLTVY Xenopus_laevis_Ceacam388N QLIPQYPVVSQSVTLSVTGVTGTI--RQFSWYKGSSVDANNQIFNVIPSLNS-VTNGRQYFPRASHFPNGSLQISGLVPTDQGNYTVFI----QTGETTAQHTVLLTVD Xenopus_laevis_Ceacam389.L_N QLIPQNPVVNQSVTLSVTGVTVTI--RQFSWYKGSSVDTNNQIFNVIPQTNS-VTHGRQYFSRASHFPNGSLQISGLVPTDQGNYTVLI----QTIETSAQHTVLLTVY Xenopus_laevis_Ceacam390.L_N EVIPKHPTPNSNVILSVKDVAGEI--RSFSWYNGSNPSASNQILNYIPSLTPPQTKGHMYFTEAEGLANGSLLIKDFVKKFEGVYTVQI----QAESPL-QASVTVTMS Xenopus_laevis_Ceacam376.1.S_N ELIPQCALIGKNVTLSVSEINGML--KSFSWYLGDAPSASNQIINYLVGLTPPTTNGPKHFTDAIGLPNGSLLITNLKEEYSNTYTVQV----QADSPD-RASADLIVT Xenopus_laevis_Ceacam376.2.S_N ELIPQCALKGKNVTLSVSEINGML--KSFSWYLGDAPSASNQIINYLVGLTPPTTNGPKNFSDAIGLPNGSLLIANLKDEYSNTYTVQV----QADSPD-QVTKKLTVT Xenopus_laevis_Ceacam389.S_N QLIPQNPVVNQSVTLSVTGVTGTI--RLFTWYKGSSTDANVQIFSVIPSVNS-VTNGLQYFPRASQFPNGSLQISGLVPTDQGNYTVFI----QTIESTAQHTVLLTVY Xenopus_laevis_Ceacam390.S_N EVIPTRPIPNSDVTLKVKGVIGTI--RSFSWYNGSNPSASNQILNYIPSLTPPQTKGHMYFDQAEALANGSLLIKNFVKTFEGFYTVQI----QAESPL-QASVSVTMS ; END; BEGIN TREES; Title Xenopus_laevis; LINK Taxa = Taxa; TRANSLATE [0] 1 Xenopus_laevis_Ceacam325N, [1] 2 Xenopus_laevis_Ceacam326N, [2] 3 Xenopus_laevis_Ceacam327N, [3] 4 Xenopus_laevis_Ceacam328N, [4] 5 Xenopus_laevis_Ceacam329N, [5] 6 Xenopus_laevis_Ceacam330N, [6] 7 Xenopus_laevis_Ceacam331N, [7] 8 Xenopus_laevis_Ceacam332N, [8] 9 Xenopus_laevis_Ceacam333N, [9] 10 Xenopus_laevis_Ceacam334N1, [10] 11 Xenopus_laevis_Ceacam335N1, [11] 12 Xenopus_laevis_Ceacam338N, [12] 13 Xenopus_laevis_Ceacam339N, [13] 14 Xenopus_laevis_Ceacam340N1, [14] 15 Xenopus_laevis_Ceacam341N, [15] 16 Xenopus_laevis_Ceacam342.L_N, [16] 17 Xenopus_laevis_Ceacam343N1, [17] 18 Xenopus_laevis_Ceacam342.S_N, [18] 19 Xenopus_laevis_Ceacam376.L_N, [19] 20 Xenopus_laevis_Ceacam377N, [20] 21 Xenopus_laevis_Ceacam378N, [21] 22 Xenopus_laevis_Ceacam379N, [22] 23 Xenopus_laevis_Ceacam380N, [23] 24 Xenopus_laevis_Ceacam381N, [24] 25 Xenopus_laevis_Ceacam382N, [25] 26 Xenopus_laevis_Ceacam383N, [26] 27 Xenopus_laevis_Ceacam384N, [27] 28 Xenopus_laevis_Ceacam385N, [28] 29 Xenopus_laevis_Ceacam386N, [29] 30 Xenopus_laevis_Ceacam387N, [30] 31 Xenopus_laevis_Ceacam388N, [31] 32 Xenopus_laevis_Ceacam389.L_N, [32] 33 Xenopus_laevis_Ceacam390.L_N, [33] 34 Xenopus_laevis_Ceacam376.1.S_N, [34] 35 Xenopus_laevis_Ceacam376.2.S_N, [35] 36 Xenopus_laevis_Ceacam389.S_N, [36] 37 Xenopus_laevis_Ceacam390.S_N; TREE Imported_tree_1 = (((14:0.32796979,15:0.29653154):0.13696144[%posteriorProbability = 0.614 ],(((10:0.11572924,12:0.10469116):0.14244401[%posteriorProbability = 0.958 ],((6:0.10750531,11:0.0):0.31677222[%posteriorProbability = 1 ],(5:0.03247448,(2:0.09752603,8:0.06041347):0.04322791[%posteriorProbability = 0.588 ]):0.23093763[%posteriorProbability = 0.978 ]):0.08656624[%posteriorProbability = 0.528 ]):0.13652172[%posteriorProbability = 0.62 ],((16:0.08174153,18:0.19034379):1.06468585[%posteriorProbability = 1 ],(1:0.06069233,(3:0.03222083,(4:0.08751143,(7:0.09241754,(13:0.09850529,(9:0.08735141,17:0.06046918):0.01245624[%posteriorProbability = 0.388 ]):0.06250372[%posteriorProbability = 0.606 ]):0.02886445[%posteriorProbability = 0.324 ]):0.07391814[%posteriorProbability = 0.336 ]):0.12326452[%posteriorProbability = 0.45 ]):0.21060358[%posteriorProbability = 0.944 ]):0.10144083[%posteriorProbability = 0.2 ]):0.18704864[%posteriorProbability = 0.414 ]):0.21207426[%posteriorProbability = 1 ],(20:0.2475604,(((33:0.10797168,37:0.08116282):0.25267147[%posteriorProbability = 0.996 ],(19:0.13345768,(34:0.05307299,35:0.07048223):0.11261683[%posteriorProbability = 0.962 ]):0.38659174[%posteriorProbability = 1 ]):0.19815342[%posteriorProbability = 0.97 ],(((21:0.12556776,27:0.19367698):0.06657722[%posteriorProbability = 0.768 ],((22:0.1198693,26:0.20040625):0.11439311[%posteriorProbability = 0.95 ],(23:0.23613545,25:0.29858339):0.05079532[%posteriorProbability = 0.382 ]):0.05062801[%posteriorProbability = 0.422 ]):0.18423253[%posteriorProbability = 0.99 ],(29:0.16353241,(24:0.22271793,(31:0.02195357,(28:0.0416982,(32:0.05862381,(30:0.0592034,36:0.07229544):0.03094852[%posteriorProbability = 0.332 ]):0.02466225[%posteriorProbability = 0.408 ]):0.02472257[%posteriorProbability = 0.508 ]):0.06700278[%posteriorProbability = 0.966 ]):0.03848792[%posteriorProbability = 0.524 ]):0.13452572[%posteriorProbability = 0.842 ]):0.09129062[%posteriorProbability = 0.602 ]):0.1253596[%posteriorProbability = 0.448 ]):0.86238955[%posteriorProbability = 1 ])[% ] [% ] [% setBetweenBits = selected setBetweenDouble = posteriorProbability ]; END;