#NEXUS BEGIN TAXA; TITLE Taxa; DIMENSIONS NTAX=39; TAXLABELS Xenopus_tropicalis_Ceacam302N Xenopus_tropicalis_Ceacam303N Xenopus_tropicalis_Ceacam304N Xenopus_tropicalis_Ceacam307N Xenopus_tropicalis_Ceacam308N Xenopus_tropicalis_Ceacam309N Xenopus_tropicalis_Ceacam311N Xenopus_tropicalis_Ceacam313N1 Xenopus_tropicalis_Ceacam314N Xenopus_tropicalis_Ceacam315N Xenopus_tropicalis_Ceacam316N Xenopus_tropicalis_Ceacam317N Xenopus_tropicalis_Ceacam318N1 Xenopus_tropicalis_Ceacam319N Xenopus_tropicalis_Ceacam320N Xenopus_tropicalis_Ceacam321N Xenopus_tropicalis_Ceacam350N Xenopus_tropicalis_Ceacam351N Xenopus_tropicalis_Ceacam353P_N Xenopus_tropicalis_Ceacam354N Xenopus_tropicalis_Ceacam355N Xenopus_tropicalis_Ceacam356N Xenopus_tropicalis_Ceacam357N Xenopus_tropicalis_Ceacam358N Xenopus_tropicalis_Ceacam359N Xenopus_tropicalis_Ceacam360N Xenopus_tropicalis_Ceacam361N Xenopus_tropicalis_Ceacam362N Xenopus_tropicalis_Ceacam363N1 Xenopus_tropicalis_Ceacam364N Xenopus_tropicalis_Ceacam365N1 Xenopus_tropicalis_Ceacam366N Xenopus_tropicalis_Ceacam367N Xenopus_tropicalis_Ceacam368N Xenopus_tropicalis_Ceacam369N Xenopus_tropicalis_Ceacam370N Xenopus_tropicalis_Ceacam371N Xenopus_tropicalis_Ceacam372N Xenopus_tropicalis_Ceacam375N ; END; BEGIN CHARACTERS; TITLE Xenopus_tropicalis; DIMENSIONS NCHAR=107; FORMAT DATATYPE = Protein GAP = - MISSING = ?; MATRIX Xenopus_tropicalis_Ceacam302N QNVFE-GIVGGSVNLTVKLNLPANRLVQWKFK-----TSTLIVTGLPGGSPLYTDD--YKGRCHLYENSTLRLDNLTPADEGNYTLSVTNQGNGDTE-TGSVMLLIY Xenopus_tropicalis_Ceacam303N ENVT--GTVGKSVYLTVKLDLPAQRQVTWKVN-----SSTQIVTAVTGGSPVYFGD--YGGRCTLYENTTLRLDNLTPTDTGEYTLTVANTGTGATQ-SGSVYLTVN Xenopus_tropicalis_Ceacam304N QSVS--GIVGGSVTLTAILNVPAQPVVTWRFG------TDQIAYAALGNSAVYNNS--CTDRCTLYGNASLRLGSLTPADTGEYSLTVLNVPAGTQQ-TELFHLSVY Xenopus_tropicalis_Ceacam307N DNVA--GTEGKSVYLTVRLDLPAQRQVTWRVN-----SSSQIVTAVTGGSPVYAAD--YRDRCHLYGNATLQLDNLTPADTGEYTLSVANVSTGATE-SGSVYLTVY Xenopus_tropicalis_Ceacam308N ENVT--GTEGKSVYLTVKLDLPAQRQVTWKVN-----SSIQIVTALPGVSPVYTDS--YRDRCSLYGNTTLRLDNLTLTDTGEYSLSVTNLETGAPPVTGSVYLTVY Xenopus_tropicalis_Ceacam309N ENVQ--GIEGQSVTLSVNLTLFENQMITWYFN-----KYSLVASETTNNAPSFFGG--YEGRCTLFENATLQLDNLTPADQGNYTLTVLNLDTGLSV-SGLVCLTVQ Xenopus_tropicalis_Ceacam311N ENVQ--GIEGESVTLSINLNVTVFILIEWSFD------SHSMIAMLTGNSPIYFGE--YEGRCTLFENATLQLDNLTPADQGNYTLTVLDGETGMPV-SGSVCLSVQ Xenopus_tropicalis_Ceacam313N1 FMLL-HGIEGRAVYFPIYMTLPKNHRKQWWFD-----TSTLIVTDFSNGITSYTEE--YKDRCSIYINSTLRMDKLTLADQGMYSLNVTNLDNGHSQ-SESLYLMVY Xenopus_tropicalis_Ceacam314N DNVQ--VFEGESVTLSVNLNMSEYQMITWKFD-----TYTLVAIKTVNNTPTCFPE--YEGRCTLFANATLLLDNLTPAEEGNYTLTVMDVETGASL-SGSIFLSVQ Xenopus_tropicalis_Ceacam315N E----SGELGKSVYLTVKLNLPAQREVQWRFG-----TNTLIVSAQPGIPPIYYGA--YRGRCTLYENTTLQLDSLTDADTGQYTLSVINVDTGAQQ-QGSVNLTVH Xenopus_tropicalis_Ceacam316N Q---VEGIVGESVNLSIKLNLPAQLLVQWGFG-----TNIHIVTAFPDTTPQYFGA--YRGRCTLYGNTNLRLDNLTPIDTGEYTLTVTNMDTGAIQ-SGSVYLTVY Xenopus_tropicalis_Ceacam317N ENVT--GTEGKSVYLTVKLDLPAQQQVTWRVN-----SSTQIVTVYPGGSPIYTDS--YRDRCTLYGNTTLRLDNLTPTDTGEYSLSVTNPNSGATQ-SGSVYLTVY Xenopus_tropicalis_Ceacam318N1 QNVS--GIVGGSVTLTSTLNLPAQSTVTWMFG------TDRIAYAALSDPAIYDNS--CIGRCTLYGNTTLRLGSLTPADTGEYTLSVYNVLSGTQQ-TELFHLSVY Xenopus_tropicalis_Ceacam319N ENVV--GTVGKSVYLTVKLDLPAQRQVTWKFN-----SSIQIVIALPGGSPTYNGD--YRDRCTLYGNTTLRLDSLTPTDTGEYSLTVANMDTGAPQ-SGSVYLTVY Xenopus_tropicalis_Ceacam320N ENVN--GTVGKSVYLTVKLDLPAQRQVTWKVN-----SSSQIVTALPGGSPAYNGD--YRDRCTLYGNTTLRLDNLTPTDTGEYSLTVTNLDTVGPLLTGSVYLTVY Xenopus_tropicalis_Ceacam321N E----SGELGKSVNLTVKLNLPAQREVQWKFS-----TNTVIVSAPPGIPPTYYGA--YRGRCTLYENTTLQLDSLTDADTGQYTLSVINVDTGEQQ-QGSVNLTVH Xenopus_tropicalis_Ceacam350N QLIPQYPVVSQSVTLSVTGVTGTIRQFDWFKG-SSADTKNQIFSVIPPLNTV-TEGPQYFPRANWFPNGSLQISGLVPTDQGNYTVLIQTAESVTQA---TVSLPVY Xenopus_tropicalis_Ceacam351N QLIPQYPVVSQSVTLSVTGVTGTVIAFAWYKG-SSADTNNQIFIVIPSLNSV-TEGRQYFPRANWFPNGSLQISGLVPTDQGNYTVLIETAESRAQH---TVSLPVY Xenopus_tropicalis_Ceacam353P_N QLIPQYPVLNQSVTLSVTGVTGTIRKFTWYKG--SSTHDSQIFRVILSLDSV-TEGPQYFPHVSQFPNGSLQISGLVPTDQGTYRVLIQSGSITHLL---QVFVTVY Xenopus_tropicalis_Ceacam354N QLIPQYPVLNQSVTLSITGVTGTIRQFDWYKG-SSVDTNTQIFSVIPSANSV-TEGPQYFPRANWLPNGSLQISGLVPTDQGNYTVRIQTAESTVQA---TVSLPVY Xenopus_tropicalis_Ceacam355N EVIPKLPTPNSDVTLKVKGVSGIIRSFSWYNG-SNPSASNQILNYIPSLQPPQTKGHMYFPQAEGLPNGSLLIKDFVKKFEGVYTVQIQADSPLQA----SVSVTMS Xenopus_tropicalis_Ceacam356N QLIPQYPVVSQSVTLSVTGVTGTIRQFSWYKG-SSADTNNQIFSVIPSANSV-TKGPQYFPRANWLPNGSLQISGLVPTDQGNYTVLMYTAESTTQD---TVSLPVY Xenopus_tropicalis_Ceacam357N KLKPDCASVGKNVTLSVSGINGNITSFTWYLG--EPSASNQIINYAVSFTPPSAPGPKNFSDAIGLPNGSLLITNLKTEYSNTYTVQVQADTPGQA----SAELTVQ Xenopus_tropicalis_Ceacam358N QLIPDCASVGKNVTLSVSGINGNLNSFTWYLG--EPSASNQIINYIVSITPPSAPGPKNFSDAIGLPNGSLLITNLKTEYSNTYTVQVQASTPGQA----SAELTVE Xenopus_tropicalis_Ceacam359N QLIPSHPLVNKSVTLNVRGITGTLRYFRWYLG-SRIDAANQILHYNPNVNPPQLPGVQYFPRAHGLPNGSLHISDLAHTDQGMYTVMILTGGMERL----TVHLPVY Xenopus_tropicalis_Ceacam360N QAIPKYPVVNKPVTLSVSGVSGAIRSFSWYSS-SAIWNSSLILSYNPTSNPVETQGPKYFPRASSFSNGSLRISKLFTTDRGYYTVQIQAESSTQE----TINLPVY Xenopus_tropicalis_Ceacam361N QPIPEYPVVNQPVTLSVSGVSGAIRSFSWYKG-QFVDDSSLILAYNPTSYLVARRGPEYFPRASVLPDGSLKIFKIYTAVRRYYTVQIQAESLTQE----TINLPVY Xenopus_tropicalis_Ceacam362N QAIPKYPVVNQSVTLSVSGVSGAIRSFSWYKS-SSITNSSLILTYNSSSNPVETQGPQYFSRASGLSDGSLRISTLYTSDQTSYTVQVEASSLTKD----SIYLRVY Xenopus_tropicalis_Ceacam363N1 QPIPEYPVVNQPLTLSVSGVSGAIRSFSWYKS-SSIANSSLILTYNSSSNPVETHGPQYFSRASGLSDGSLRISTLYTSDQTSYTVQVEAGSLTKD----SIYLRVY Xenopus_tropicalis_Ceacam364N QLIPQYPVVNQSVTLSVTGVNGTIEKFTWYKV-LNAHDYNQILSVIPSLNTV-TKGPQYFSRASQFPNGSLQISGLVPADQGTYTVQIQTAENITWF---PVLLPVY Xenopus_tropicalis_Ceacam365N1 QLIPQYPVVNQSVTLRVTGVTGTIRQFTWYKG-SSTDSNNQIFSVIPSANSV-TKGPQYLPRASWFPNGSLQISGLVPTDQGNYTVQIQTENLTQV----TVLLRVN Xenopus_tropicalis_Ceacam366N QLIPKNPVVNQSVTLRVSGVSGAILSFSWYGGLSDDDNMFLILTYNLSSYPVEKRGPLYIPGARGLPDGSLKISKLSTAYRGIFTVGIQAESFPTKG---SIYLPVF Xenopus_tropicalis_Ceacam367N QLIPKYPVANQPVTLSVSGVSGAILSFSWYRS-SAIMNSSLILSYNPTLNPAETQGPQYFPRASSFSNGSLHIVELSTTDRGYYTVQVQAGSLTSQ----TIDLPVY Xenopus_tropicalis_Ceacam368N QLIPQYPVVNQSVTLSVTGVTGTIRQFSWYKG-SSTDTNNNIFNVIPSANSV-TPGAQYFLRANWFPNGSLQISGLVPTDQGNYTVLIVTAESVTQA---TVSLPVY Xenopus_tropicalis_Ceacam369N QLIPQYPVVNQSVTLSITGVTGTVSAFLWYKG-SSADTNNNIFSVIPSVNIV-SKGPQYFPRANWFPNGSLQISGLVPTDQGNYTVQIVTPGNAAQH---TVSLPVY Xenopus_tropicalis_Ceacam370N QLIPQYPVVSQSVTLSVTGVTGAIRQFTWYKG-SSTDTNNQIFSVIPSYSSV-TEGPQYFPRASQFPNGSLQISGLVPTDQGNYTVLIQTAGSRAQH---TVSLPVY Xenopus_tropicalis_Ceacam371N QLIPQYPVVSQSVTLSVTGVTGTIRQFDWYKG-SSTNTNTQIFTVIPSTNSV-TKGPQYFPRASQFPNGSLQISGLFLTDQGSYTVQIQTESTVQA----TVSLPVY Xenopus_tropicalis_Ceacam372N QLIPQYPVVSQSVTLSVTGVTGTIRKFTWYKG--SSTHGSQIFRVISSLDSV-TEGPQYFSHVSQFPNGSLQISGLVPSDQGTYRVQIQAGSITHLL---QVFVTVY Xenopus_tropicalis_Ceacam375N QLIPQYPVVSQSVTLSVTGVTGTIRQFTWYKG-SSADTNNQIFSVIPSANSV-TEGPQYFPRANWFPNGSLQISGLVPTDQGNYTVQLVTAESRAQH---TVSLPVY ; END; BEGIN TREES; Title Xenopus_tropicalis; LINK Taxa = Taxa; TRANSLATE [0] 1 Xenopus_tropicalis_Ceacam302N, [1] 2 Xenopus_tropicalis_Ceacam303N, [2] 3 Xenopus_tropicalis_Ceacam304N, [3] 4 Xenopus_tropicalis_Ceacam307N, [4] 5 Xenopus_tropicalis_Ceacam308N, [5] 6 Xenopus_tropicalis_Ceacam309N, [6] 7 Xenopus_tropicalis_Ceacam311N, [7] 8 Xenopus_tropicalis_Ceacam313N1, [8] 9 Xenopus_tropicalis_Ceacam314N, [9] 10 Xenopus_tropicalis_Ceacam315N, [10] 11 Xenopus_tropicalis_Ceacam316N, [11] 12 Xenopus_tropicalis_Ceacam317N, [12] 13 Xenopus_tropicalis_Ceacam318N1, [13] 14 Xenopus_tropicalis_Ceacam319N, [14] 15 Xenopus_tropicalis_Ceacam320N, [15] 16 Xenopus_tropicalis_Ceacam321N, [16] 17 Xenopus_tropicalis_Ceacam350N, [17] 18 Xenopus_tropicalis_Ceacam351N, [18] 19 Xenopus_tropicalis_Ceacam353P_N, [19] 20 Xenopus_tropicalis_Ceacam354N, [20] 21 Xenopus_tropicalis_Ceacam355N, [21] 22 Xenopus_tropicalis_Ceacam356N, [22] 23 Xenopus_tropicalis_Ceacam357N, [23] 24 Xenopus_tropicalis_Ceacam358N, [24] 25 Xenopus_tropicalis_Ceacam359N, [25] 26 Xenopus_tropicalis_Ceacam360N, [26] 27 Xenopus_tropicalis_Ceacam361N, [27] 28 Xenopus_tropicalis_Ceacam362N, [28] 29 Xenopus_tropicalis_Ceacam363N1, [29] 30 Xenopus_tropicalis_Ceacam364N, [30] 31 Xenopus_tropicalis_Ceacam365N1, [31] 32 Xenopus_tropicalis_Ceacam366N, [32] 33 Xenopus_tropicalis_Ceacam367N, [33] 34 Xenopus_tropicalis_Ceacam368N, [34] 35 Xenopus_tropicalis_Ceacam369N, [35] 36 Xenopus_tropicalis_Ceacam370N, [36] 37 Xenopus_tropicalis_Ceacam371N, [37] 38 Xenopus_tropicalis_Ceacam372N, [38] 39 Xenopus_tropicalis_Ceacam375N; TREE PAUP_1 = (((9:0.267949,(6:0.210248,7:0.327265):0.025093):0.413882,(8:0.895386,((3:0.1566,13:0.122349):0.715437,(1:0.391472,((11:0.273644,(10:0.025901,16:0.053172):0.283514):0.042343,(4:0.215557,(2:0.079323,((5:0.086081,12:0.107361):0.079555,(14:0.073321,15:0.10492):0.0):0.064537):0.011909):0.144023):0.00936):0.00000374444):0.18791):0.019908):1.136835,((21:0.332964,(23:0.056344,24:0.029119):0.585654):0.321698,(((27:0.180575,32:0.395795):0.052562,((26:0.052485,33:0.166571):0.063427,(28:0.013857,29:0.052234):0.194369):0.046044):0.263354,(25:0.564513,((30:0.245457,(19:0.035345,38:0.048971):0.235456):0.098407,((31:0.09791,37:0.123117):0.0,(36:0.040597,((39:0.017627,(18:0.059854,35:0.145953):0.034208):0.00793,(17:0.059421,(34:0.085189,(20:0.078426,22:0.043059):0.017142):0.00000117663):0.044189):0.035886):0.09299):0.00000639853):0.201804):0.00669):0.00000418669):1.136835)[% ] [% ] [% setBetweenBits = selected ]; END;