NEXUS
[File created by TreeBASE:  1/16/09  15:34:00]
[Matrix accession#: M3765]

BEGIN TAXA;
	TITLE M3765;
	DIMENSIONS  NTAX=15;
	TAXLABELS
		Nectria_cinnabarina_AF193237	Bionectria_ochroleuca_AY283558	Bionectria_ochroleuca_DQ862027	Hydropisphaera_erubescens_AF193228	Hydropisphaera_erubescens_AF193229	Hydropisphaera_fungicola_EU344902	Hydropisphaera_multiloculata_EU289204	Hydropisphaera_multiseptata_EU289205	Hydropisphaera_peziza_AY489730	Lasionectria_mantuana_EU289207	Lasionectria_sylvana_EU289206	Nalanthamala_squamicola_EU289208	Nectriopsis_violacea_AY489719	Ochronectria_calami_AF193243	Ochronectria_calami_AF193244
	;
END;

BEGIN CHARACTERS;
	TITLE M3765;
	DIMENSIONS NCHAR=567;
	FORMAT DATATYPE = DNA MISSING = ? GAP = - ;
	MATRIX
		Nectria_cinnabarina_AF193237                GGGATTGCCCAAGTAACGGCGATGTGAATCGGCAACAGCTCAAATTTGAAATCTAGGCCCTTGTGGTCCGAGTTGTAATTTGTARAGGATGCTTTTGGTGAGGTAC-TTCCGA-TTCCCTGGAACGGGACGCCATAGAGGGTGAGAGCCCCGTCTGGTTGGATACCGATCCTCTGTAAAGCTCCTTCGACGAGTCGAGTA-TTTGGG-AATGCTGCTCTAAATGGGAGGTATATGTCTTCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTTGATCGAAAGATGAAAAGCACTTTGAAAAGAGGGT-AAATAGTACGTGAAATTGGTTGAAAGGGAAGCGCTTGTGACCAGACTTGGGCTTGGTTAATCATCCAGGGTTCTCCCTGGTGCACTTGGCCAGCCCAGGCCAGCATCAGTTTGTCGCGGGGGATAAAGGCGTTGGGAATGTGGCTCCCCC--GGGAGTGTTATAGCCCTTCGTGTAATACCCTGCTTTAGACTGAGGTTCGCGCATCTGCAAGGATGCTGGCGTAATGGTCATCAGCGACCCGTCTT
		Bionectria_ochroleuca_AY283558              GGGATTGCCCTAGTAACGGCGA-GTGAAGCGGCAACAGCTCAAATTTGAAATCT-GGCGCA---AGCCCGAGTTGTAATTTGTAGAGGATGTTTCTGGCGACGTGCCTTCCGAGTTCCCTGGAACGGGACGCCATAGAGGGTGAGAGCCCCGTACGGTTGGATGCCTAGCCTCTGTGAAACTCCTTCGACGAGTCGAGTAGTTTGGG-AATGCTGCTCTAAATGGGAGGTATACGTCTTCTAAAGCTAAATACCGGCCAGAGACCGATAGCGCACAAGTAGAGT-GATCGAAAGATGAAAAGCACTTTGAAAAGAGGGTTAAAAAGTACGTGAAATTG-TTGAAAGGGAAGCGTTCATGACCAGACTTGGGCA-GGTTGATCATCCGTGGTTCTCCGCGGTGCACTCTGCCTGCCCAGGCCAGCATCAGTTCGCCCCGGGGGATAAAGGCTTTGGGAATGTGGCTCCCTC--GGGAGTGTTATAGCCCACTGTGTAATACCCTGGGGTGGACTGAGGTTCGCGC-TCTGCAAGGATGCTGGCGTAATGGTCATCAACGACCCGTCTT
		Bionectria_ochroleuca_DQ862027              GGGATTGCCCTAGTAACGGCGA-GTGAAGCGGCAACAGCTCAAATTTGAAATCT-GGCGCA---AGCCCGAGTTGTAATTTGTAGAGGATGTTTCTGGCGACGTGCCTTCCGAGTTCCCTGGAACGGGACGCCATAGAGGGTGAGAGCCCCGTACGGTTGGATGCCTAGCCTCTGTGAAACTCCTTCGACGAGTCGAGTAGTTTGGG-AATGCTGCTCTAAATGGGAGGTATACGTCTTCTAAAGCTAAATACCGGCCAGAGACCGATAGCGCACAAGTAGAGT-GATCGAAAGATGAAAAGCACTTTGAAAAGAGGGTTAAAAAGTACGTGAAATTG-TTGAAAGGGAAGCGTTCATGACCAGACTTGGGCA-GGTTGATCATCCGCGGTTCTCCGCGGTGCACTCTGCCTGCCCAGGCCAGCATCAGTTCGCCCCGGGGGATAAAGGTTTCGGGAATGTGGCTCCTCC--GGGAGTGTTATAGCCCGTTGCGTAATACCCTGGGACGGACTGAGGTTCGCGC-TCTGCAAGGATGCTGGCGTAATGGTCATCAACGACCCGTCTT
		Hydropisphaera_erubescens_AF193228          GGGATTGCCTTAGTAACGGCGA-GTGAAGCGGCAACAGCTCAAATTTGAAATCT-GGCCTTCT-GGCCCGAGTTGTAATTTGCAGAGGATGTTTCTGGCGAGGTGCCTTCCGAGTTCCCTGGAACGGGACGCCATAGAGGGTGAGAGCCCCGTACGGTTGGTCGCTAAGCCTCTGTGAAACTCCTTCGACGAGTCGAGTAGTTTGGGGAATGCTGCTCTAAATGGGAGGTATACGTCTTCTAAAGCTAAATACCGGCTAGAGACCGATAGCGCACAAGTAGAGT-GATCGAAAGATGAAAAGCACTTTGAAAAGAGGGTTAAATAGTACGTGAAATTG-TTGAAAGGGAAGCGCTCATGACCAGACTTGGACC-GGTTGATCATCCATCGTTCTCGGTGGTGCACTCTGCCGGTTCAGGCCAGCATCAGTTTGGCCCGGGGGATAAAGGTTTCGGGAATGTGGCTCCCCACGGGGAGTGTTATAGCCCGTTGCGTAATACCCTGGGCTGGACTGAGGTTCGCGC-TCCGCAAGGATGCTGGCGTAATGGTCATCAGTGACCCGTCTT
		Hydropisphaera_erubescens_AF193229          GGGATTGCCTCAGTAACGGCGA-GTGAAGCGGCAACAGCTCAAATTTGAAATCT-GGCCTTCT-GGCCCGAGTTGTAATTTGCAGAGGATGTTTCTGGCGAGGTGCCTTCCGAGTTCCCTGGAACGGGACGCCATAGAGGGTGAGAGCCCCGTACGGTTGGTCGCTAAGCCTCTGTGAAACTCCTTCGACGAGTCGAGTAGTTTGGG-AATGCTGCTCTAAATGGGAGGTATACGTCTTCTAAAGCTAAATACCGGCTAGAGACCGATAGCGCACAAGTAGAGT-GATCGAAAGATGAAAAGCACTTTGAAAAGAGGGTTAAATAGTACGTGAAATTG-TTGAAAGGGAAGCGCTTATGACCAGACTTGGACC-GGTTGATCATCCATCGTTCTCGGTGGTGCACTCTGCCGGTTCAGGCCAGCATCAGTTTGGCCCGGGGGATAAAGGCTTCGGGAATGTGGCTCCCCACGGGGAGTGTTATAGCCCGTTGCGTAATACCCTGGGCTGGACTGAGGTTCGCGC-TCCGCAAGGATGCTGGCGTAATGGTCATCAGTGACCCGTCTT
		Hydropisphaera_fungicola_EU344902           GGGATTGCCTCAGTAACGGCGA-GTGAAGCGGCAACAGCTCAAATTTGAAATCT-GGCCCTA--GGCCCGAGTTGTAATTTGCAGAGGATGTTTCTGGCGAGGTGCCTTCCGAGTGCCCTGGAACGGGACGCCATAGAGGGTGAGAGCCCCGTACGGTTGGTCGCTAAGCCTCTGTGAAACTCCTTCGACGAGTCGAGTAGTTTGGG-AATGCTGCTCTAAATGGGAGGTATACGTCTTCTAAAGCTAAATACCGGCCAGAGACCGATAGCGCACAAGTAGAGT-GATCGAAAGATGAAAAGCACTTTGAAAAGAGGGTTAAATAGTACGTGAAATTG-TTGAAAGGGAAGCGCTCATGACCAGACTTGGGCC-GGTTGATCATCCGCCGTTCTCGGCGGTGCACTCTGCCGGCTCAGGCCAGCATCAGTTTGGTCCGGGGGATAAAGGTGTAGGGAATGTGGCTCCCCCCGGGGAGTGTTATAGCCCTGCGCGTAATACCCTGGACTGGACTGAGGTTCGCGCATCTGCAAGGATGCTGGCGTAATGGTTATCAGTGACCCGTCTT
		Hydropisphaera_multiloculata_EU289204       GGGATTGCCTCAGTAACGGCGA-GTGAAGCGGCAACAGCTCAAATTTGAAATCT-GGCCTTCT-GGCCCGAGTTGTAATTTGCAGAGGATGTTTCTGGCGAGGTGCCTTCCGAGTTCCCTGGAACGGGACGCCATAGAGGGTGAGAGCCCCGTACGGTTGGTCGCTAAGCCTCTGTGAAACTCCTTCGACGAGTCGAGTAGTTTGGG-AATGCTGCTCTAAATGGGAGGTATACGTCTTCTAAAGCTAAATACCGGCTAGAGACCGATAGCGCACAAGTAGAGT-GATCGAAAGATGAAAAGCACTTTGAAAAGAGGGTTAAATAGTACGTGAAATTG-TTGAAAGGGAAGCGCTCATGACCAGACTTGGGCC-GGTTGATCATCCACCGTTCTCGGTGGTGCACTCTGCCGGTTCAGGCCAGCATCAGTTTGGTCCGGGGGATAAAGGTTTCGGGAATGTGGCTCCCCACGGGGAGTGTTATAGCCCGTTGCGTAATACCCTGGGCTGGACTGAGGTTCGCGC-TCCGCAAGGATGCTGGCGTAATGGTCATCAGTGACCCGTCTT
		Hydropisphaera_multiseptata_EU289205        GGGATTGCCTCAGTAACGGCGA-GTGAAGCGGCAACAGCTCAAATTTGAAATCT-GGCCTTCT-GGCCCGAGTTGTAATTTGCAGAGGATGTTTCTGGCGAGGTGCCTTCCGAGTTCCCTGGAACGGGACGCCATAGAGGGTGAGAGCCCCGTACGGTTGGTCGCTAAGCCTCTGTGAAACTCCTTCGACGAGTCGAGTAGTTTGGG-AATGCTGCTCTAAATGGGAGGTATACGTCTTCTAAAGCTAAATACCGGCTAGAGACCGATAGCGCACAAGTAGAGT-GATCGAAAGATGAAAAGCACTTTGAAAAGAGGGTTAAATAGTACGTGAAATTG-TTGAAAGGGAAGCGCTCATGACCAGACTTGGGCC-GGTTGATCATCCACCGTTCTCGGTGGTGCACTCTGCCGGTTCAGGCCAGCATCAGTTTGGTCCGGGGGATAAAGGTTTCGGGAATGTGGCTCCCCACGGGGAGTGTTATAGCCCGTTGCGTAATACCCTGGGCTGGACTGAGGTTCGCGC-TCCGCAAGGATGCTGGCGTAATGGTCATCAGTGACCCGTCTT
		Hydropisphaera_peziza_AY489730              GGGATTGCCTCAGTAACGGCGA-GTGAAGCGGCAACAGCTCAAATTTGAAATCT-GGCCCTA--GGCCCGAGTTGTAATTTGCAGAGGATGTTTCTGGCGAGGTGCCTTCCGAGTGCCCTGGAACGGGACGCCATAGAGGGTGAGAGCCCCGTACGGTTGGTCGCTAAGCCTCTGTGAAACTCCTTCGACGAGTCGAGTAGTTTGGG-AATGCTGCTCTAAATGGGAGGTATACGTCTTCTAAAGCTAAATACCGGCCAGAGACCGATAGCGCACAAGTAGAGT-GATCGAAAGATGAAAAGCACTTTGAAAAGAGGGTTAAATAGTACGTGAAATTG-TTGAAAGGGAAGCGCTCATGACCAGACTTGGGCC-GGTTGATCATCCGCCGTTCTCGGCGGTGCACTCTGCCGGCTCAGGCCAGCATCAGTTTGGTCCGGGGGATAAAGGTGTAGGGAATGTGGCTCCCCCCGGGGAGTGTTATAGCCCTGCGCGTAATACCCTGGACTGGACTGAGGTTCGCGCATCTGCAAGGATGCTGGCGTAATGGTTATCAGTGACCCGTCTT
		Lasionectria_mantuana_EU289207              GGGATTGCCTCAGTAACGGCGA-GTGAAGCGGCAACAGCTCAAATTTGAAATCT-GGCTCTCG-GGCCCGAGTTGTAATTTGCAGAGGATGTTTCTGGCGAGGTGCCTTCCGAGTTCCCTGGAACGGGACGCCATAGAGGGTGAGAGCCCCGTCCGGTTGGTCGCTAAGCCTCTGTGAAACTCCTTCGACGAGTCGAGTAGTTTGGG-AATGCTGCTCTAAATGGGAGGTATACGTCTTCTAAAGCTAAATACCGGCCAGAGACCGATAGCGCACAAGTAGAGT-GATCGAAAGATGAAAAGCACTTTGAAAAGAGGGTTAAATAGTACGTGAAATTG-TTGAAAGGGAAGCGTTTATGACCAGACTTGGGCC-GGTTGATCATCCATCGTTCTCGGTGGTGCACTCTGCCGGCTCAGGCCAGCATCAGTTTGGCTTGGGGGATAAAGGTTTCGGGAATGTGGCTCCCTC--GGGAGTGTTATAGCCCGTTGCGCAATACCCTGGGCTAGACTGAGGTTCGCGC-TCCGCAAGGATGCTGGCGTAATGGTCATCAGCGACCCGTCTT
		Lasionectria_sylvana_EU289206               GGGATTGCCTCAGTAACGGCGA-GTGAAGCGGCAACAGCTCAAATTTGAAATCT-GGCTCTCG-GGCCCGAGTTGTAATTTGCAGAGGATGTTTCTGGCGAGGTGCCTTCCGAGTTCCCTGGAACGGGACGCCATAGAGGGTGAGAGCCCCGTCCGGTTGGTCGCTAAGCCTCTGTGAAACTCCTTCGACGAGTCGAGTAGTTTGGG-AATGCTGCTCTAAATGGGAGGTATACGTCTTCTAAAGCTAAATACCGGCCAGAGACCGATAGCGCACAAGTAGAGT-GATCGAAAGATGAAAAGCACTTTGAAAAGAGGGTTAAATAGTACGTGAAATTG-TTGAAAGGGAAGCGTTTATGACCAGACTTGGGCC-GGTTGATCATCCATCGTTCTCGGTGGTGCACTCTGCCGGCTCAGGCCAGCATCAGTTTGGCTTGGGGGATAAAGGTTTCGGGAATGTGGCTCCCTC--GGGAGTGTTATAGCCCGTTGCGTAATACCCTGGGCTAGACTGAGGTTCGCGC-TCCGCAAGGATGCTGGCGTAATGGTCATCAGCGACCCGTCTT
		Nalanthamala_squamicola_EU289208            GGGATTGCCTCAGTAACGGCGA-GTGAAGCGGCAACAGCTCAAATTTGAAATCT-GGCCCTA--GGCCCGAGTTGTAATTTGCAGAGGATGTTTCTGGCGAGGTGCCTTCCGAGTTCCCTGGAACGGGACGCCATAGAGGGTGAGAGCCCCGTACGGTTGGTCGCTAAGCCTCTGTGAAACTCCTTCGACGAGTCGAGTAGTTTGGG-AATGCTGCTCTAAATGGGAGGTATACGTCTTCTAAAGCTAAATACCGGCTAGAGACCGATAGCGCACAAGTAGAGT-GATCGAAAGATGAAAAGCACTTTGAAAAGAGGGTTAAATAGTACGTGAAATTG-TTGAAAGGGAAGCGCTTATGACCAGACTTGGGCC-GGTTGATCATCCATCGTTCTCGGTGGTGCACTCTGCCGGCTCAGGCCAGCATCAGTTTGGCCCGGGGGATAAAGGTTTCGGGAATGTGGCTTCCTTCGGGGAGTGTTATAGCCCGTTGCGTAATACCCTGGGCTGGACTGAGGTACGCGT-TCTGCAAGGATGCTGGCGTAATGGTCATCAGTGACCCGTCTT
		Nectriopsis_violacea_AY489719               GGCATTGCCCCAGTAACGGCGA-GTGAAGCGGCAACAGCTCAAATTTGAAATCT-GGCCC-CA-GGCCCGAGTTGTAATTTGTAGAGGATGTTTCTGACGAGGTACCTTCCGAGTTCCCTGGAACGGGACGCCATAGAGGGTGAGAGCCCCGTACGGTTGGTCGCCAAGTCTCTGTGAAACTCCTTCGACGAGTCGAGTAGTTTGGG-AATGCTGCTCAAAATGGGAGGTATACGTCTTCTAAAGCTAAATATAGGCCAGAGACCGATAGCGCACAAGTAGAGT-GATCGAAAGATGAAAAGCACTTTGAAAAGAGGGTTAAATAGTACGTGAAATTG-TTGAAAGGGAAGCGCACATGACCAGACTTGGCCA-GGTTGATCATCCATCGTTCTCGGTGGTGCACTCTGCCTGGCCAGGCCAGCATCAGTTCGCCTTGGGGGATAAAGGTTTCGGGAATGTGGCTCCTCC--GGGAGTGTTATAGCCCGTTGCGCAATACCCTGGGGTGGACTGAGGTTCGCGCATCTGCAAGGATGCTGGCGTAATGGTCATCTGCGACCCGTCTT
		Ochronectria_calami_AF193243                GGGATTGCCCCAGTAACGGCGA-GTGAAGCGGCAACAGCTCAAATTTGAAATCT-GGCTCTCG-GGCCCGAGTTGTAATTTGAAGAGGATGTTTCTGGCAAGGTACCTTCTGAGTTCCCTGGAACGGGACGCCATAGAGGGTGAGAGCCCCGTCTAGTTGGTCGCCGCGCCTCTGTGAAACTCCTTCGACGAGTCGAGTAGTTTGGG-AATGCTGCTCAAAATGGGAGGTATACGTCTTCTAAAGCTAAATACCGGCCAGAGACCGATAGCGCACAAGTAGAGT-GATCGAAAGATGAAAAGCACTTTGAAAAGAGGGTTAAATAGTACGTGAAATTG-TTGAAAGGGAAGCGCTCATGACCAGACTTGGGCC-GGTTGATCATCCATCGTTCTCGGTGGTGCACTCTGCCGGTCCAGGCCAGCATCAGTTTGCCCCGGGGGATAAAGGCTTCGGGAATGTGGCTCCCTA--GGGAGTGTTATAGCCCGTTGCGTAATACCCTGTGGCAGACTGAGGTCCGCGC-TCTGCAAGGATGCTGGCGTAATGGTCATCAGCGACCCGTCTT
		Ochronectria_calami_AF193244                GGGATTGCCCCAGTAACGGCGA-GTGAAGCGGCAACAGCTCAAATTTGAAATCT-GGCTCTCG-GGCCCGAGTTGTAATTTGAAGAGGATGTTTCTGGCAAGGTACCTTCTGAGTTCTCTGGAACGGGACGCCATAGAGGGTGAGAGCCCCGTCTAGTTGGTCGCCGCGCCTCTGTGAAACTCCTTCGACGAGTCGAGTAGTTTGGG-AATGCTGCTCAAAATGGGAGGTATACGTCTTCTAAAGCTAAATACCGGCCAGAGACCGATAGCGCACAAGTAGAGT-GATCGAAAGATGAAAAGCACTTTGAAAAGAGGGTTAAATAGTACGTGAAATTG-TTGAAAGGGAAGCGCTCATGACCAGACTTGGGCC-GGTTGATCATCCATCGTTCTCGGTGGTGCACTCTGCCGGTCCAGGCCAGCATCAGTTTGCCCTGGGGGATAAAGGCTTCGGGAATGTGGCTCCCTA--GGGAGTGTTATAGCCCGTTGCGTAATACCCTGTGGCAGACTGAGGTCCGCGC-TCTGCAAGGATGCTGGCGTAATGGTCATCAGCGACCCGTCTT
	;
END;

BEGIN CODONS;
CODONPOSSET * CodonPositions = 
 N: 1 - 567 ; 
 CODESET * UNTITLED = Universal: all ; 
 END;

BEGIN ASSUMPTIONS;
OPTIONS DEFTYPE = unord PolyTcount = MINSTEPS ; 
 END;